mRNA_P-fluviatile_contig14.2276.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.2276.1
Unique NamemRNA_P-fluviatile_contig14.2276.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig14.2276.1 vs. uniprot
Match: D7FNL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL0_ECTSI)

HSP 1 Score: 401 bits (1030), Expect = 3.420e-140
Identity = 195/236 (82.63%), Postives = 210/236 (88.98%), Query Frame = 1 
Query:    1 MYSTKRVNKNTVDGNRFISVGDPYNELRRLPGRWKGKQFQTEGCPSNAENGNFAKLKYSSEPFQETERFAKTQPLSRRKLGFGTKDAFKRGEFTIAIRTEQYREMLRQEQRLLEAQRDVKAEEEIVTRAKAKHASMRTFVQGRKEIKHLYDVGRTLQNEFNPYRTHDSFYDFQKSKGMRMGPYRTMASDIGSMAWDHRPTAPEFGPICHTKNFYDRSHLAVADEDACAVQQRARLR 708
            MYSTKRVNKN V+GNRFISVGDPY ELRRLPGRWKGKQFQTEGCP+NA+NGNFAKLKYSSEPFQETERF KTQPLS+R LGFGTKDAFKRGEFT  IRT+QYREMLRQEQRL+ A R+VK E E V +AKAKHAS R FV+G++EIKHLYDVGR+LQNEFNPYR HD+FYDFQKS G RMGPYRTMA DIG+MAWDHRPTAPEFGPI H KNFYDRSHL VA E+A  VQ R RLR
Sbjct:    1 MYSTKRVNKNIVEGNRFISVGDPYKELRRLPGRWKGKQFQTEGCPANADNGNFAKLKYSSEPFQETERFTKTQPLSKRNLGFGTKDAFKRGEFTATIRTQQYREMLRQEQRLMNASRNVKDEREKVAQAKAKHASSRRFVEGKEEIKHLYDVGRSLQNEFNPYRKHDAFYDFQKSTGKRMGPYRTMAQDIGNMAWDHRPTAPEFGPIGHIKNFYDRSHLEVAGEEAHMVQPRLRLR 236
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BLAST of mRNA_P-fluviatile_contig14.2276.1 vs. uniprot
Match: A0A836CAI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAI9_9STRA)

HSP 1 Score: 234 bits (596), Expect = 2.110e-74
Identity = 126/222 (56.76%), Postives = 152/222 (68.47%), Query Frame = 1 
Query:    1 MYSTKRVNKNTVDGNRFISVGDPYNELR-RLPGRWKGKQFQTEGCPSNAENGNFAKLKYSSEPFQETERFAKTQPLSRRKLGFGTKDAFKRGEFTIAIRTEQYREMLRQEQRLLEAQRDVKAEEEIVTRAKAKHASMRTFVQGRKEIKHLYDVGRTLQNEFNPYRTHDSFYDFQKSKGMRMGPYRTMASDIGSMAWDHRPTAPEFGPICHTKNFYDRSHLAV 663
            MYSTKRVN    +G  +ISVGDPY   +  LPGRWKGK F+    P NAENGNF+KL+Y S  FQE ER++KTQP   RK GFGTKDAF+RGEFT  IRTEQYR+ LR+EQ ++    D   + EI+ RA+ K  S RTF +G  E  HLYDVGRT   +F+P  + D FY    ++  RMG +RTMA DIG  AW H+  +PEFGPI HTK F+DRSHL V
Sbjct:    1 MYSTKRVNDKIAEG--YISVGDPYRGTKDTLPGRWKGKGFKVLQVPVNAENGNFSKLEYKSCAFQEMERYSKTQPD--RKKGFGTKDAFRRGEFTATIRTEQYRDQLRKEQTIMAKFCDPVRDSEIIRRAEEKQRSTRTFCEGLPETDHLYDVGRTQVTKFDPKHSRDRFYTPDINRERRMGGFRTMAQDIGDGAWSHKYKSPEFGPIHHTKLFWDRSHLTV 218
[Close]
BLAST of mRNA_P-fluviatile_contig14.2276.1 vs. uniprot
Match: D7G5S6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5S6_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 2.470e-69
Identity = 111/211 (52.61%), Postives = 141/211 (66.82%), Query Frame = 1 
Query:   34 VDGNRFISVGDPYNELRR-LPGRWKGKQFQTEGCPSNAENGNFAKLKYSSEPFQETERFAKTQPLSRRKLGFGTKDAFKRGEFTIAIRTEQYREMLRQEQRLLEAQRDVKAEEEIVTRAKAKHASMRTFVQGRKEIKHLYDVGRTLQNEFNPYRTHDSFYDFQKSKGMRMGPYRTMASDIGSMAWDHRPTAPEFGPICHTKNFYDRSHLAV 663
            VDG  +IS+GD Y   +  LP RWKGK       P NAENGNF++L+Y SEP+ + E+F+KTQPL +RKLGFGTKDAF+ GEFT  IRTEQYR++LR E+ ++E  RD   ++    + +   A  R F  G KEI+HLYDVGR+   EF+P  + D FY     +  R GPYRTMA DIGS AW H   +PE GPI H K FYD+SHL++
Sbjct:    2 VDGGSYISIGDMYKGNKIILPDRWKGKGLSVPQLPKNAENGNFSRLEYRSEPYADMEKFSKTQPLDKRKLGFGTKDAFRPGEFTATIRTEQYRDLLRAEKNIMEKHRDPAKDQAAAQKYEKDCAEHRAFPDGLKEIEHLYDVGRSQVTEFDPKNSRDRFYTLSIGQEKRRGPYRTMAQDIGSGAWGHTYQSPEHGPIHHVKFFYDKSHLSL 212
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BLAST of mRNA_P-fluviatile_contig14.2276.1 vs. uniprot
Match: A0A6V1R9I1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R9I1_HETAK)

HSP 1 Score: 218 bits (554), Expect = 5.060e-68
Identity = 111/221 (50.23%), Postives = 148/221 (66.97%), Query Frame = 1 
Query:    1 MYSTKRVNKNTVDGNRFISVGDPYNELRRLPGRWKGKQFQTEGCPSNAENGNFAKLKYSSEPFQETERFAKTQPLSRRKLGFGTKDAFKRGEFTIAIRTEQYREMLRQEQRLLEAQRDVKAEEEIVTRAKAKHASMRTFVQGRKEIKHLYDVGRTLQNEFNPYRTHDSFYDFQKSKGMRMGPYRTMASDIGSMAWDHRPTAPEFGPICHTKNFYDRSHLAV 663
            MY+TKR+NKN +D + +IS+ DPY E R+LP RWK KQF     P+    G FAK  Y+ +P++E   F K QP   RKLGFGTKDA KRGEFT  IRTEQYRE L++EQR+L+ QRD  AE   + RA+ K    R+F +G  E + LYD+GR    +F+P ++ D+FY  +K +  R+G ++T A+ +GS AWDH  + PEFGPI + KNFYD+ HL  
Sbjct:    1 MYATKRINKNKIDVS-YISIQDPYVENRKLPPRWKEKQFAVAHLPNPENGGYFAKKTYAPDPYKEAVHFIKEQPADSRKLGFGTKDASKRGEFTATIRTEQYRETLKKEQRILDHQRDPAAETMTLERAR-KREEERSFPEGLSETRRLYDIGRQNVTDFDPRQSRDTFYTLRKDRPKRLGHHQTAAAAVGSGAWDHEYSKPEFGPIPYVKNFYDKGHLGT 219
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BLAST of mRNA_P-fluviatile_contig14.2276.1 vs. uniprot
Match: A0A7S2XZN8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZN8_9STRA)

HSP 1 Score: 201 bits (510), Expect = 2.460e-61
Identity = 103/223 (46.19%), Postives = 147/223 (65.92%), Query Frame = 1 
Query:    1 MYSTKRVNKNTVDGNR-FISVGDPYNELRR-LPGRWKGKQFQTEGCPSNAENGNFAKLKYSSEPFQETERFAKTQPLSRRKLGFGTKDAFKRGEFTIAIRTEQYREMLRQEQRLLEAQRDVKAEEEIVTRAKAKHASMRTFVQGRKEIKHLYDVGRTLQNEFNPYRTHDSFYDFQKSKGMRMGPYRTMASDIGSMAWDHRPTAPEFGPICHTKNFYDRSHLAV 663
            MY T R +KN +D +  ++++GDPY +  R +P RWK KQF  +  P+  ++G F + KY  E ++E E + K+QP  RRK GFG+ DA +RGEFT  IRTEQYRE L+QE R+ E QRD ++E +++  A A+    RTF +G  E +HLYD+G+    EF+P  + D+FY  +K +  R+G + T +  +G  AWDH+ T PEFGPI + KNFYDRSHL +
Sbjct:    1 MYRTHRTHKNLLDKDASYVTIGDPYIDPNRTIPPRWKEKQFVVQHKPALKQSGYFEEFKYQPEEYKEMESYLKSQPQDRRKNGFGSHDATRRGEFTSTIRTEQYRETLKQELRVHEKQRDPESERKVMAIA-AEREMGRTFTEGLTETRHLYDIGKKQVTEFDPRSSRDTFYVMRKDRPKRLGAHTTSSQAVGDGAWDHKYTKPEFGPIPYVKNFYDRSHLQI 222
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BLAST of mRNA_P-fluviatile_contig14.2276.1 vs. uniprot
Match: A0A7S2EF12_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EF12_TRICV)

HSP 1 Score: 183 bits (465), Expect = 2.590e-54
Identity = 104/236 (44.07%), Postives = 145/236 (61.44%), Query Frame = 1 
Query:    1 MYSTKRVNKNTVDGNR--FISVGDPY-NELRRLPGRWKGKQFQTEGCPSNAENGNFAKLKYSSEPFQE-TERFAKTQPLSRRKLGFGTKDAFKRGEFTIAIRTEQYREMLRQEQRLLEAQRDVKAEEEIVTRAKAKHASMRTFVQGR--KEIKHLYDVGRTLQNEFNPYRTHDSFYDFQKS-------KGM----RMGPYRTMASDIGSMAWDHRPTAPEFGPICHTKNFYDRSHL 657
            MYSTK ++KN     +  + S+GDPY N +  LP RWK KQF T  CP NA NG F K +Y+ +P+ E  E+++KTQPL +R+LGFG+ DAFK GEFT    TE+YR ++RQEQ+LL++ RD   E E++ + + +  +      G+  KE K LYDVGRT    ++P  T DSFY   K        KG+    R+G +R M++ IG  AW H+   PEFG + + + FYDR H+
Sbjct:    1 MYSTKSIHKNINPNYQQTYTSIGDPYRNSVEELPSRWKKKQFVTPKCPKNAYNGLFVKPQYTPDPYTERAEQYSKTQPLEKRRLGFGSHDAFKPGEFTSDKATERYRNVVRQEQKLLDSVRDEMRERELIQKLRDRPRTTPKDKLGKDLKEPKFLYDVGRTHVTLYSPQSTRDSFYKLPKHAPVDPKLKGLDPIRRLGSHRPMSASIGEQAWRHKYAKPEFGQVKYIEKFYDRGHI 236
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BLAST of mRNA_P-fluviatile_contig14.2276.1 vs. uniprot
Match: A0A7S2CP23_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CP23_9STRA)

HSP 1 Score: 179 bits (453), Expect = 1.620e-52
Identity = 104/241 (43.15%), Postives = 144/241 (59.75%), Query Frame = 1 
Query:    1 MYSTKRV-NKNTVD------GNRFISVGDPY-NELRRLPGRWKGKQFQTEGCPSNAENGNFA----KLKYSSEPFQETERFAKTQPLSRRKLGFGTKDAFKRGEFTIAIRTEQYREMLRQEQRLLEAQRDVKAEEEIVTRAKAKHASMRTFVQGRKEIKHLYDVGRTLQNEFNPYRTHDSFYDFQKSK-------GMRMGPYRTMASDIGSMAWDHRPTAPEFGPICHTKNFYDRSHLAVA 666
            MYSTK   NKN V+       +++IS+GDPY + + +LP RWK  QFQ +  P NA NG F        Y+S+P++ET  +   QP  +R +GFGTKDA KR EF   IRTEQYRE L++E  +L+ QRD + E  ++ + +   +    FV G  E ++LYD+GRT    FNP    D FY  + +K        MR+GPY T +S IG+ AW+   + P+FG +  TKNF D+SHL+VA
Sbjct:    1 MYSTKIASNKNAVEMGDTKPHDKYISIGDPYVDRVGKLPERWKKPQFQIDRMPKNAGNGYFGYNNKDFTYASDPYKETRSYKAEQPPEKRTMGFGTKDASKRDEFAATIRTEQYRETLKRENTILDEQRDREKEAALMEKLRNTKSE---FVPGLTETEYLYDIGRTQSTPFNPKSAGDRFYQRRLNKDLDPKQGSMRLGPYMTSSSQIGTGAWETPYSKPQFGTVSPTKNFNDKSHLSVA 238
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BLAST of mRNA_P-fluviatile_contig14.2276.1 vs. uniprot
Match: F0YHZ6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHZ6_AURAN)

HSP 1 Score: 176 bits (446), Expect = 1.320e-51
Identity = 105/229 (45.85%), Postives = 139/229 (60.70%), Query Frame = 1 
Query:    1 MYSTKRVNKN-TVDGNRFISVGDPYNELR-RLPGRWKGKQFQTEGCPSNAENGNFA----KLKYSSEPFQETERFAKTQPLSRRKLGFGTKDAFKRGEFTIAIRTEQYREMLRQEQRLLEAQRDVKAEEEIVTRAKAKHASMRTFVQGRKEIKHLYDVGRTLQNEFNPYRTHDSFYDFQK--SKGMRMGPYRTMASDIGSMAWDHRPTAPEFGPICHTKNFYDRSHLAV 663
            MY+TK +NKN TVD  R+I+VGDPY   + +LP RWK KQF     PSNA  G F        Y SE + E   + KTQP  +RKLGFGT DA +R EF+  IRTEQYRE L++E R      D  A EE++   K ++A ++ FV+ +KEI +LYDVGR++  EF+P    D FY  +   +   RMG  RT + DIG  AW+ + + PEF      KNF+D+SHL +
Sbjct:    1 MYTTKFMNKNVTVDNGRYITVGDPYIGTKDKLPLRWKEKQFHVPQVPSNAGEGYFGFSGKAFSYQSELYTEQRPYMKTQPPDKRKLGFGTHDASRRDEFSQTIRTEQYRETLKKEGRANNNGYDEDAIEELM---KKENAKVKKFVETKKEIGNLYDVGRSIHTEFDPKNGRDQFYSMKHGYTYEKRMGNNRTASQDIGDGAWNFKYSKPEFSAPSQVKNFFDQSHLDI 226
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BLAST of mRNA_P-fluviatile_contig14.2276.1 vs. uniprot
Match: A0A482RVI8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVI8_9ARCH)

HSP 1 Score: 159 bits (401), Expect = 9.290e-45
Identity = 99/234 (42.31%), Postives = 139/234 (59.40%), Query Frame = 1 
Query:    1 MYSTKRVNKNTVDGNRFISVGDPYNELRRLPGRW--KGKQ---FQTEGCPSNAENGNFAKLKYSSEPFQETERFAKTQPLSRRKLGFGTKDAFKRGEFTIAIRTEQYREMLRQEQRLLEAQRDVKAEEEIVTRAKAKHASM---------RTFVQGRKEIKHLYDVGRTLQNEFNPYRTHDSFYDFQKSKGMRMGPY-RTMASDIGSMAWDHRPTAPEFGPICHTKNFYDRSHL 657
            MYS+K V+K+ V  N +I+VGDPY++ +  P R   KG++   FQ++G P NAE G F K  Y  E ++E  ++  TQPL +RKLGFGTKDA KR EF+   RTEQYRE LR+E+ + E+   VK   E +T+  A+ A+M          T   G K I+  YD+GRT   +FNP  T D FY F +  G   G   + ++ ++G+ AW+ +   P FG     KNF+D+SHL
Sbjct:    1 MYSSKLVHKSMVANNAYITVGDPYHDPKANPFRQGKKGEKLTPFQSKGIPQNAELGYFTKKSYVPEGYKEGIKYITTQPLDQRKLGFGTKDAHKRDEFSSNNRTEQYRETLRKEKEMAESPEVVK---EKLTKLLAERATMDFATQTRYTNTLSGGPKRIRQ-YDIGRTQVTDFNPKATRDKFYRFDEEHGRYFGDLAQPISCEVGAAAWETQYRPPAFGGKGEVKNFFDKSHL 230
[Close]
BLAST of mRNA_P-fluviatile_contig14.2276.1 vs. uniprot
Match: B8BXP8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXP8_THAPS)

HSP 1 Score: 150 bits (380), Expect = 1.080e-41
Identity = 91/220 (41.36%), Postives = 130/220 (59.09%), Query Frame = 1 
Query:    1 MYSTKRVNKNTVDGNR--FISVGDPYN-ELRRLPGRWKGKQFQTEGCPSNAENGNFAKLKYSSEPFQE-TERFAKTQPLSRRKLGFGTKDAFKRGEFTIAIRTEQYREMLRQEQRLLEAQRDVKAEEEIVTRAKAKHASMRTFVQGR--KEIKHLYDVGRTLQNEFNPYRTHDSFYDFQKSKGM-----------RMGPYRTMASDIGSMAWDHRPTAPE 609
            MYSTK ++KN     R  + S+GDPYN    RLPGRWK KQF T+  P NA+NG F KLKY S+P+ E +E+++KTQPL  RKLGFG++D  K GEFT    T++YR +++QE +LL+  R+   E+E++ + K      R    GR  K  K ++D+GR+    +NP   +DSFY+  K   +           R+G +R  ++ IG  AW +    PE
Sbjct:    1 MYSTKSIHKNINPNYRQTYTSIGDPYNGNGERLPGRWKEKQFFTQKHPKNADNGFFVKLKYQSDPYTEISEQYSKTQPLDSRKLGFGSRDVSKSGEFTCYKATQRYRSVVKQENKLLQLHRNDSKEKELLGKPKDPTLPPRDR-NGRELKSAKFMFDIGRSCVTAYNPNSAYDSFYNLPKHAPVESNWQGNDPIRRLGSHRPSSTTIGEHAWKYGYQKPE 219
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7FNL0_ECTSI3.420e-14082.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CAI9_9STRA2.110e-7456.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G5S6_ECTSI2.470e-6952.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1R9I1_HETAK5.060e-6850.23Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XZN8_9STRA2.460e-6146.19Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2EF12_TRICV2.590e-5444.07Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2CP23_9STRA1.620e-5243.15Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0YHZ6_AURAN1.320e-5145.85Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A482RVI8_9ARCH9.290e-4542.31Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
B8BXP8_THAPS1.080e-4141.36Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:2395464..2400312 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score401.0
Seed ortholog evalue3.9e-109
Seed eggNOG ortholog2880.D7FNL0
EggNOG OGs290NK@1,2S4NB@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_005080.1
Exons7
Model size711
Cds size711
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815629.016594-CDS-P-fluviatile_contig14:2395463..23955101622815629.016594-CDS-P-fluviatile_contig14:2395463..2395510Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2395464..2395510 +
1693562555.4661384-CDS-P-fluviatile_contig14:2395463..23955101693562555.4661384-CDS-P-fluviatile_contig14:2395463..2395510Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2395464..2395510 +
1622815629.0348961-CDS-P-fluviatile_contig14:2396395..23964791622815629.0348961-CDS-P-fluviatile_contig14:2396395..2396479Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2396396..2396479 +
1693562555.47901-CDS-P-fluviatile_contig14:2396395..23964791693562555.47901-CDS-P-fluviatile_contig14:2396395..2396479Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2396396..2396479 +
1622815629.0488553-CDS-P-fluviatile_contig14:2397004..23970651622815629.0488553-CDS-P-fluviatile_contig14:2397004..2397065Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2397005..2397065 +
1693562555.4931452-CDS-P-fluviatile_contig14:2397004..23970651693562555.4931452-CDS-P-fluviatile_contig14:2397004..2397065Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2397005..2397065 +
1622815629.0592954-CDS-P-fluviatile_contig14:2397642..23977581622815629.0592954-CDS-P-fluviatile_contig14:2397642..2397758Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2397643..2397758 +
1693562555.50876-CDS-P-fluviatile_contig14:2397642..23977581693562555.50876-CDS-P-fluviatile_contig14:2397642..2397758Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2397643..2397758 +
1622815629.0720248-CDS-P-fluviatile_contig14:2398567..23986191622815629.0720248-CDS-P-fluviatile_contig14:2398567..2398619Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2398568..2398619 +
1693562555.5180168-CDS-P-fluviatile_contig14:2398567..23986191693562555.5180168-CDS-P-fluviatile_contig14:2398567..2398619Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2398568..2398619 +
1622815629.08522-CDS-P-fluviatile_contig14:2399205..23993671622815629.08522-CDS-P-fluviatile_contig14:2399205..2399367Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2399206..2399367 +
1693562555.5282016-CDS-P-fluviatile_contig14:2399205..23993671693562555.5282016-CDS-P-fluviatile_contig14:2399205..2399367Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2399206..2399367 +
1622815629.0947251-CDS-P-fluviatile_contig14:2400123..24003121622815629.0947251-CDS-P-fluviatile_contig14:2400123..2400312Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2400124..2400312 +
1693562555.536677-CDS-P-fluviatile_contig14:2400123..24003121693562555.536677-CDS-P-fluviatile_contig14:2400123..2400312Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2400124..2400312 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2276.1prot_P-fluviatile_contig14.2276.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 2395464..2400312 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.2276.1

>prot_P-fluviatile_contig14.2276.1 ID=prot_P-fluviatile_contig14.2276.1|Name=mRNA_P-fluviatile_contig14.2276.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=237bp
MYSTKRVNKNTVDGNRFISVGDPYNELRRLPGRWKGKQFQTEGCPSNAEN
GNFAKLKYSSEPFQETERFAKTQPLSRRKLGFGTKDAFKRGEFTIAIRTE
QYREMLRQEQRLLEAQRDVKAEEEIVTRAKAKHASMRTFVQGRKEIKHLY
DVGRTLQNEFNPYRTHDSFYDFQKSKGMRMGPYRTMASDIGSMAWDHRPT
APEFGPICHTKNFYDRSHLAVADEDACAVQQRARLR*
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mRNA from alignment at P-fluviatile_contig14:2395464..2400312+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.2276.1 ID=mRNA_P-fluviatile_contig14.2276.1|Name=mRNA_P-fluviatile_contig14.2276.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4849bp|location=Sequence derived from alignment at P-fluviatile_contig14:2395464..2400312+ (Porterinema fluviatile SAG_2381)
ATGTACAGCACAAAACGCGTGAACAAGAACACCGTCGATGGCAACAGGTA
AGGGGACTACCAGCAATCAATCGTGATAATGTGTTTGTCGTTGATACATC
CATCGCCTCTTGGCTTGAAGGCTAGAGACATTTAATTAAACCTCATCATC
CTAGCCCAGCGATCCAGAATTTTCCTCGGGCTTATGAGCCAAAGGGTTGG
ATAAGAGACTGGGGTAGAGCGGTCCCGCCGTAACATGGGAATTCAAAGCC
AAGAAAGACATCTACAAGGCTGTCCCAGGGGGGGAGTGCATGATTATCAT
CGGCACAAAACCATCGGAATCAGGTACGAACGGGGGCTGCGAAATCGGGT
GGGTTGAGGAGGGAGGAGCCGAGCGAGATGGGATGCCTCAATACACCCGT
TCTATGATTGTTCCAAACGCGGGAGGTAACGATGATTACCTGAAGACGTA
AAACGAGTATGGCCGATTATATCTACATATTATATAATGTATACTTCGGA
GTATATGTTACGGGCCGGCATCGTTACGGAAGCCCATCGTTACACTTTAT
GGATTGAGGGCCCCTCCCTGGTGTTCGGGTGCCACATCTGCCCAGTTGAA
TTGTGAAAGTGAAAGTGAAAGTGAAAGTCAAAACCTGAAGCAAAGACGCT
TTACCAATCTGAGACTCAGATACTCAGAGACGATCTGAATCCTGTGCACG
GTGCACGACCGGAAGCTCGTTGCAATCTCGACGGATAGCGCTACTCGAAC
TCGGTCAGAGTCGATCATTCATTCCCTGATTTCTTCTATCAACAGCGACG
CGAACAGATCTGAAACCAATTGCAATATTGACGACTGCAAGAGGTGAACG
GCTGCCATTGTCAGACGGCCCTGTCGCGGGAATCCTCTGAATCCTCGGTC
TCATATGTATGAAACGTGCCACGACCTGCCAGGTTCATATCAGTTGGGGA
CCCTTACAACGAGCTGAGGAGGCTGCCCGGTCGTTGGAAGGGAAAGCAAT
TCCAAACAGAGGGTTGGTGAGGGCAAACTATTCAACACCAGTGTATCTGT
GTGGTGCTCGCTCGTAGTGTTGATCTGAAGCTGCAGCGCATATCCGCATC
GCACCAGCGATATCTTCATTGACGTCGAAGTGTCAATATAATTCAAAACA
TGGACCAATCGATGCGTTGAGCAAAACCACATTTCTCGAGAAGTCTTCAG
TCGACAGTCGGCGATTTCACCTACAAACGAGACGCTGGTCGAGCCAAGCA
AGGTCCACCGTTCTCCTCTGAAAAGAAGGGCTTTTCTTTCAAATTATCAA
ATTATGTTTTTCGAAGCTTACATTACAACTTTTAGCAGAGGGAGAGCCCG
CGCCCTGCTCCCAGGATGCCAGCTTCTGTGCACTTTCGCGAGTGCCTTGG
AGGCTAGCCGTTCTCGCATTCTCTTCAGACCGGCAAATTTAGAATAAGGG
CTAGGGTCAAGAACACCAGACGATTACACTTATACGATCTCTCGTCCTCG
CCCGCATTGCTTTCTCTCCTCCTGCATGGCACGGTGCACAGTCCTTCCAA
TGCCGAGAATGGCAACTTTGCCAAGCTGAAGTATTCTTCAGAGCCGTTTC
AGGTATGTTGTGAAACGTTGTTTTGCCTCAGCCGAAACCCGCACGTCAGG
AGGCGACCTTTCCCTTGACTTATGCCTCTTTTGTTTGGGTGCATGAGTAC
GTCCACTTTGCAGTGTTGACTGGGTGTAAAACTGGGAACTACCTGCCTAA
ACGAAGAAAACGCTAGCGCCCGAGTCAATTCTAAAAATGTGCGGGCTGAT
GGAAGAGAATCGTAAGTGAGCCGATCACGCCCCGGTTGTAATATGCCAAA
GGTACTCGCTTGTTGCGTTGTTGATTCGTCGGAACTGCATCCTTGTGTTG
CATACCTCGAGACGGTTCCTGGCTCAAGCATCTTTTCCGTGGGCGTGTAC
ACGTCGGTTGCTTGCTTTGTTGATGAGACGTTTGTTGTAGTTGAAAGCGC
GTAGGCTGCTTCTGCCGATGGATTCGGTGGCCTGCTTGTGGCATGTGAGA
AGACTTTTCAGGTTTGCTCTCATTGTGATTGTCACGCGCCTGCACCGCTC
CCGCCGACATTATCACACTACTGATCGCAACATGGCACACCTGGCTGCTG
GCTGTCTTGTTGGTCGTCCTGTCTTTCAGGAGACAGAGCGGTTCGCCAAG
ACACAGCCGCTGAGCCGGCGAAAGCTGGGCTTCGGCACCAAGGATGCCTT
CAAGAGAGGGGAGTTCACGATCGCCATTCGAACGGAGCAGTACCGGTACG
TTGACGAGCCAAGCACACACGCGGCGAAAGCAAACCAGGAAGATATGCCA
TACTATCGTGAACCATGTTTGGAAGAATACCGACGGCATTGCAGCGAGGC
CTGAGATGGTTATCGCACAACTTACGTCGTCGAAGTCTGGCGACCGGTGT
GCCGGCCTCGCATGCTTTTCAAAGATAAAAAACGATTATTTGGAACGCAG
TGTTCCACCCGTGGCGAGGGTAGAAACAGCCATCGGGGAGACGGCAATAG
CAAGCACCGTGGAGCTGCAGACAGTGCCGTCCGCAGGCAGCCCCTCTGTC
GAGGCAAACAGCAAGGGCATCAGCAGCGATTTCAATCCTCAAGGCGCGCG
CGCTTTGGCTGTGTTCTCTGCCTCATAACGCGATAGTCTCGGTGCGACCA
GCCCGGCTCAAATCCACCAACGTTTCGGACGAGGGTTTGCTTCTGATCCG
AAAACCAGGACCTTGATTGCTTGCTATTTCTGGGCACCCTTTCGTAATTC
GGTCAAAGTCTTGCGGTCTAACACTCCGCTTGCAATGTATCGTCAGAGGG
TCGGCTTTTACTTTTTTTTTCGCAACGACGTGTTTAATGTACCGGCATCC
ATTTATTTGACAGACGGCACTTCACGAGTATTTTTCATACCTACGTTGAG
GGTTCAACTACGAGCCACGGTGTAATTCTTCTATAAAATCTGGCGCAGTG
GAGCCGAAGTTTCTGCTGCGAGCTTAAAAAAAAAGCCACCTTCAAACCAA
ACCCAGTCCGATGTCTCTTGTTCATTTCGCTCACTCGCGTGAAATGACAA
ACAGGGAGATGCTGCGTCAGGAGCAGCGGTTGCTGGAAGCACAGCGCGAT
GTTAAGGTGGGAATCTGCACGAAATCGGGGGCCGAGCAACTGTAGCTATT
AGTGGCGCAATTTCTCCTTGTACAGCTCAAAATCTGCTTTTTTTGCGCCT
TGTCCCATTTCGCTCATATTCAATGGGGGGGGTGATGCCGAATTCATGTG
CTTTCGATTGGATGGGCCTCGTGCGCGGTTTTCGAGGGCACACGCTTGTG
GCTCGGCGGCTTCTCGTAAGCATGGGCTTTGCAGTTGTGTGGCCGATTAG
GAGAATGCGCTGTCGACAGGGCTGCTGCTCAATTTGTGGAGACATGAAAA
AGGTAAGAAGCGTCCCTGGGAGTCTGCATGTTCCGTCGAGCTCGGACCCC
TTGGTAAGTGGTCCGAACAATAATTTCGGAATCACCCAAAACTTGCTCCA
TGAAAACGAGACAGGGCATCTTCGCTCAGGATGTACCCTGGGCCGCTAGA
CCAGTTCGACTAGCAGCTCATCTCTCTCTCTCCAACAGACAAGATCGTGA
CCTAAGCTTGGCAGCACTTCTCATGTAAGCAAACGCTGGACACGACGACC
CACCATGACCGCAAACAAAAACACGCGCCGCACATGCAATAGGCCGAGGA
GGAGATAGTGACGCGTGCCAAGGCCAAGCACGCCTCGATGAGGACATTCG
TGCAAGGGAGGAAGGAGATCAAGCACCTCTACGACGTCGGCCGCACGCTT
CAGAACGAGTTCAACCCTTACCGAACACACGACTCGTTCTACGACTTCCA
GAAGGTGACAGCAAGATTGGGGTGCTAGTTTGTGAGACTATTTTAGAAGA
AAATGCCAAGAACTTGTGAGTACTATTGAATTTTGTCTTTCAACTCGCCA
GCCCCCCTTGCGTGACCTGACAGCGAACTGGATCCGACAGCAACCACTCT
GCTTGCCTCCTGTTCTCCTGTCCACGAAAGCAGCTGCTTGCCTGTTGATC
CATGATCTTGGAACACCCGACTTGTTGGTACCAGATGAAATGTCGGGAAA
GGAGAGGAAGAAACGGACTCTCTCTGTTCTGCACCCCCCGCCCCCCTCGT
GGAATCTGTTGTCTGTCGATTTGCATAGCACTTTATTCGCTTTGTTCTTT
CTCAAACTTGTTTTCAGGTCGCAGCGCGGGGAGTTCCCAATTATGCGACG
GACATAACTTAGGAACGTGCATGTTTGGCCTCTGCTTGAAAGTCGCATAC
CATCGCTCTTACCTCTCAAGTTCCCTGCATGCACGCTTGAACGAGGGCTT
GTGGGTGTCCACTATCCTGAACAAGATGACTACCAACACACCAAACAGTC
GCCTGCACAACACGTCAAGCTTCAAGATGCGCACATGATGATAATTGTCA
CCCAGCTACGGCTGGCGCCTCCTCGATCGCCCCTCGCTCTATCTCTGCCA
CCGCCCCTCCGGTTTCTCTCCTTTATTCTGTGCGGGGCACTTAACAACCA
ACGAAAACGCTGGACGTCACACGACGACAAACCAACACTCATGACTTAAA
CAACGAGCAGTCCAAGGGGATGAGAATGGGACCGTACCGAACAATGGCTT
CAGACATCGGGAGCATGGCGTGGGACCACCGGCCGACGGCACCTGAGTTC
GGCCCGATTTGCCACACGAAGAACTTCTACGACCGTAGTCACCTGGCAGT
GGCCGACGAGGACGCCTGCGCCGTGCAACAACGGGCACGGCTGCGTTGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig14:2395464..2400312+

>mRNA_P-fluviatile_contig14.2276.1 ID=mRNA_P-fluviatile_contig14.2276.1|Name=mRNA_P-fluviatile_contig14.2276.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1422bp|location=Sequence derived from alignment at P-fluviatile_contig14:2395464..2400312+ (Porterinema fluviatile SAG_2381)
ATGTACAGCACAAAACGCGTGAACAAGAACACCGTCGATGGCAACAGATG
TACAGCACAAAACGCGTGAACAAGAACACCGTCGATGGCAACAGGTTCAT
ATCAGTTGGGGACCCTTACAACGAGCTGAGGAGGCTGCCCGGTCGTTGGA
AGGGAAAGCAATTCCAAACAGAGGGTTGGTTCATATCAGTTGGGGACCCT
TACAACGAGCTGAGGAGGCTGCCCGGTCGTTGGAAGGGAAAGCAATTCCA
AACAGAGGGTTGTCCTTCCAATGCCGAGAATGGCAACTTTGCCAAGCTGA
AGTATTCTTCAGAGCCGTTTCAGTCCTTCCAATGCCGAGAATGGCAACTT
TGCCAAGCTGAAGTATTCTTCAGAGCCGTTTCAGGAGACAGAGCGGTTCG
CCAAGACACAGCCGCTGAGCCGGCGAAAGCTGGGCTTCGGCACCAAGGAT
GCCTTCAAGAGAGGGGAGTTCACGATCGCCATTCGAACGGAGCAGTACCG
GAGACAGAGCGGTTCGCCAAGACACAGCCGCTGAGCCGGCGAAAGCTGGG
CTTCGGCACCAAGGATGCCTTCAAGAGAGGGGAGTTCACGATCGCCATTC
GAACGGAGCAGTACCGGGAGATGCTGCGTCAGGAGCAGCGGTTGCTGGAA
GCACAGCGCGATGTTAAGGGAGATGCTGCGTCAGGAGCAGCGGTTGCTGG
AAGCACAGCGCGATGTTAAGGCCGAGGAGGAGATAGTGACGCGTGCCAAG
GCCAAGCACGCCTCGATGAGGACATTCGTGCAAGGGAGGAAGGAGATCAA
GCACCTCTACGACGTCGGCCGCACGCTTCAGAACGAGTTCAACCCTTACC
GAACACACGACTCGTTCTACGACTTCCAGAAGGCCGAGGAGGAGATAGTG
ACGCGTGCCAAGGCCAAGCACGCCTCGATGAGGACATTCGTGCAAGGGAG
GAAGGAGATCAAGCACCTCTACGACGTCGGCCGCACGCTTCAGAACGAGT
TCAACCCTTACCGAACACACGACTCGTTCTACGACTTCCAGAAGTCCAAG
GGGATGAGAATGGGACCGTACCGAACAATGGCTTCAGACATCGGGAGCAT
GGCGTGGGACCACCGGCCGACGGCACCTGAGTTCGGCCCGATTTGCCACA
CGAAGAACTTCTACGACCGTAGTCACCTGGCAGTGGCCGACGAGGACGCC
TGCGCCGTGCAACAACGGGCACGGCTGCGTTGATCCAAGGGGATGAGAAT
GGGACCGTACCGAACAATGGCTTCAGACATCGGGAGCATGGCGTGGGACC
ACCGGCCGACGGCACCTGAGTTCGGCCCGATTTGCCACACGAAGAACTTC
TACGACCGTAGTCACCTGGCAGTGGCCGACGAGGACGCCTGCGCCGTGCA
ACAACGGGCACGGCTGCGTTGA
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