mRNA_P-fluviatile_contig14.2274.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.2274.1
Unique NamemRNA_P-fluviatile_contig14.2274.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:2377978..2381366 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1951
Cds size1041
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2274.1prot_P-fluviatile_contig14.2274.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 2378793..2381271 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815589.7003915-UTR-P-fluviatile_contig14:2377977..23787921622815589.7003915-UTR-P-fluviatile_contig14:2377977..2378792Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 2377978..2378792 -
1693562363.9435892-UTR-P-fluviatile_contig14:2377977..23787921693562363.9435892-UTR-P-fluviatile_contig14:2377977..2378792Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 2377978..2378792 -
1622815589.7356062-UTR-P-fluviatile_contig14:2381271..23813661622815589.7356062-UTR-P-fluviatile_contig14:2381271..2381366Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 2381272..2381366 -
1693562363.967176-UTR-P-fluviatile_contig14:2381271..23813661693562363.967176-UTR-P-fluviatile_contig14:2381271..2381366Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 2381272..2381366 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815589.7128477-CDS-P-fluviatile_contig14:2378792..23796181622815589.7128477-CDS-P-fluviatile_contig14:2378792..2379618Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2378793..2379618 -
1693562363.9515724-CDS-P-fluviatile_contig14:2378792..23796181693562363.9515724-CDS-P-fluviatile_contig14:2378792..2379618Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2378793..2379618 -
1622815589.7232103-CDS-P-fluviatile_contig14:2381056..23812711622815589.7232103-CDS-P-fluviatile_contig14:2381056..2381271Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2381057..2381271 -
1693562363.9592993-CDS-P-fluviatile_contig14:2381056..23812711693562363.9592993-CDS-P-fluviatile_contig14:2381056..2381271Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2381057..2381271 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.2274.1

>prot_P-fluviatile_contig14.2274.1 ID=prot_P-fluviatile_contig14.2274.1|Name=mRNA_P-fluviatile_contig14.2274.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=347bp
MAEQSTDIFHIHTHHATFRRTLGLRTSRQLVRRAARHPSRRSRADDGAGE
SAAHSLPASKMAYATHEASRHGSWQQQQQQQEQQRQQPPEQREEDHSGVD
GGARAAAPSRLLVEGEKRPAGSGSRPLSVLPSPPPPPPPLTILKHSRSEG
ISLVTMGTSSGKNPHGTVNGPPAPSSSLTSWRQPVSTGSGGAGTGGGAQA
AGGGRDGRQRKTGGSSWLPSRAPGQLCELARAHKTLNTKQRATTRRRRVH
FDPCVRMVLVPARKDLDEVIVRGVWWSAADVAQFRFAATKFFLRHGGGTT
TRSRPMIGSGEATLSEAESEGEEGEGAMPPMAAQRAAASDAKKAAD*
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mRNA from alignment at P-fluviatile_contig14:2377978..2381366-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.2274.1 ID=mRNA_P-fluviatile_contig14.2274.1|Name=mRNA_P-fluviatile_contig14.2274.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3389bp|location=Sequence derived from alignment at P-fluviatile_contig14:2377978..2381366- (Porterinema fluviatile SAG_2381)
CACAGGACTCAAGCAATTGGTCCCGCCTGGCAAGTACAGTACCAGCAGAA
CGGTCGATACGCGGGACACTATCAAACGTAGTGTATCCCGCGGGAATGGC
CGAACAGAGCACAGACATTTTTCACATACATACACACCACGCCACATTTC
GGCGCACGTTGGGTCTGCGGACAAGCAGGCAGCTCGTTCGAAGGGCAGCT
CGTCATCCTTCGCGGAGAAGCAGGGCCGACGACGGTGCGGGAGAGAGCGC
GGCTCACAGTCTACCAGCAAGTAAGATGGCCTACGCTACCCACGAGGCTT
CTCGTCACGGGTGAGAGAGCTGTGCGAGAGCCCAGCGGTGGATGCGGAGA
ACTCTACGATCGGATACATGTAATAGACTCTTAACAGACTTTTAGTCTAG
ACTATCATTGTTTTTTCCACCTGCGACGCGAACAACGGATATTGTGAGGC
TTGCTTGTATATCAGCGATTTGCTCGATGACCGGTGGGATAAAGAAGCAT
TTCTCCTACCTCCTGGGGAAAGCAGCGCTTAAGCTTTCAAACAAATCGCT
GTGCGTGAAGAGCAGACCTTTTGCGACCACAACCAAACGCACCGGCTCTT
TTTCCGTATCTGGAACCTCCATCCACGGTTCGTGTTTGTGCGTCATCAGG
CCGGGAAGGCGCGGCGGTCTGGTTTGTATGGCATTGTCTCAACTTCTCCG
TGACGCTCTCGATGCGATGCTCTGCACATCGTTTTTTTTTTAGCAAGGTG
GTTCAACGTGAAGGTTTCGGCGCAGACCCAGTGGGTAGCCTGCGGCTTTC
GTCGCGCCTCTCCTCGCACCCGGCAGGACCACTTTTTTTTGCTGCACCCC
TGCCCCCGAGTCCTGTGCACGTTGCTTTCTTTCCGGGCTTCACAATCACA
CGCATCATGGAAACCTACCTCAATGCCTATCTGACCAAAAGTTTTAACAA
CCGCGCTGGGCTCGACCAAGAAAGAGAGAAGGTCCGTTCTTATCTACAGA
CTCTCGACGACTTGACAGGCGTTCAGTCGATGGTCTCTCGTGCGGTGGGA
GTGTCGAAAATAGCGACCGTGTTGTTCAAGTTGTATTATCAACCCAACAA
AGTTGAACTCACGAATGAGGTTTTACGGTTGCAATTGAGCAAAAATCCGG
GTACACCATCGGATTCATCAAACTCTGGCGCTTGGTTTTCCATGGAAGGG
AATAACATAACATGCTGTTTATCCCTGACCAAAAAGCCCTATTAATAGCT
CTGAATTCACGAAGTCATTGCCAACGCGGGGGAATACCAGCAGCTTCCTG
ATGCGGCCGGGACAGAGTGTGGAAAGATGGGGCAGGGGTGGAGGGGGTCG
AGGGGCGGCTGGGGCAAGGTTTTTGACAAAATGTAGCGTATGAATCGTTT
TGGGTGTAAGGAGTTTATGTCTCCAACCTGATTTACATCTCGCGCGAAAG
CATATGTCGCAGCTCTTTTCACATCTTCATATCGAAAAACCACCCGCTTT
GACGAACCTATGGTGTTGTGTAGTGTGGTTGTACTGCTATGCGAGTGTCG
AAGGGAGTGGGATAGAGGCGTATCGGCCGAAAGAACAGGGCCGAGCCCTT
CAAATGAGGAATGGTTCGCAGCAACCAAGCCGAAAACCAGCGAGGAGCAT
GTATTTCTAGGATTTCGCGTTGAAATCAACCGGCTCTCTCATATCCTTAC
AACCTCGGTCCGACACGTCCATCGCTTTCTCCGCACTATCAAGAACAGCT
CGTGGCAGCAGCAACAGCAGCAGCAGGAACAGCAGCGGCAGCAGCCGCCG
GAACAGAGGGAGGAGGATCACAGTGGTGTCGATGGAGGGGCGAGAGCTGC
AGCGCCATCAAGACTCCTCGTCGAAGGAGAAAAGAGACCGGCTGGGTCGG
GCTCAAGGCCGCTATCCGTCTTGCCATCGCCGCCGCCGCCGCCACCTCCG
CTGACCATACTCAAGCACAGCAGGAGCGAAGGAATCAGCTTGGTCACCAT
GGGCACGTCAAGCGGCAAGAATCCCCACGGGACGGTAAACGGTCCACCGG
CACCGTCGTCGTCACTGACATCGTGGCGGCAGCCGGTCTCGACCGGCAGC
GGTGGCGCTGGAACCGGTGGCGGTGCGCAAGCGGCGGGAGGGGGTCGGGA
CGGCAGGCAGCGCAAGACCGGAGGGTCTTCTTGGCTGCCGTCGCGCGCAC
CGGGCCAGCTGTGCGAGCTGGCGCGGGCGCACAAAACGCTGAACACGAAG
CAGCGGGCCACAACGCGTCGAAGAAGGGTGCACTTCGACCCGTGCGTGCG
CATGGTCCTCGTGCCCGCCCGGAAGGACCTCGACGAGGTGATCGTTCGCG
GAGTGTGGTGGAGCGCGGCGGACGTGGCGCAGTTCCGGTTCGCCGCAACA
AAGTTCTTCCTGAGGCATGGCGGCGGGACGACTACCAGGAGCCGCCCGAT
GATAGGCAGCGGCGAGGCAACCTTGTCCGAGGCAGAGTCAGAAGGAGAAG
AAGGCGAGGGCGCAATGCCGCCGATGGCCGCGCAAAGGGCTGCCGCCAGC
GACGCCAAGAAGGCCGCGGATTAACACCAGCAGCGGGATTGTGGACGCTA
CCGTGGCACGATCTTCAAATGACAACGACGACGACGACGACGACGACAAC
GACGACGACGACGACGACGCGTTCGTCTGCAAAATTTATTTTTATTCGGC
AGTGAGATTAAGCGGGCGGGCATGACGCAGAGCCACGCCGGTTGGCACGG
AGTCAGGGTGAGAATGAGCGTCAGCATAAGGGGGCAGGTTTCGGGGCAGG
GCAGCGACACCATAATATGTGTCGCCGTTTACTAGTGCCATCTTGCCCAA
TACCCACCCGGTACCTAAGGTGGTGGAAGCATTAGCCTACGACCGGAGGC
AGACTGCGTTTCTCTTGTGGCGCTCTATCCATGAAAGAGGTCCAAAGAAA
GCGAGCGTGGAGGACGCGGAGTACCGGGGGTGGGGAGATCCAATATTCCA
GTAACATGCGCGAGAAGAGCTGCATCTCGGCTGGATCTTCTCATGGCCCA
GCGTCAAGGAGATATCCTGGTAGATATGGTATCTATCCAATCTGGGTTGT
GTGCATATGGGTGGGCCACTCTCTTCGGCCGACATAGGTTTTTGTTGCTG
TATTTTTATGTTGAAGGGCGATTCGTCGGTTCTTTGAAACCGCGGAAAAA
TTTATCCTACGTACATTCTCGAGATCGGCCAAGATGCCCTGATGGCGACC
TTGAAAGCGAAATCCAAACTTTAAAATGTGCATTTTTGAGCCGAGCCGAA
ACCGCGAATCTGCGGCTCGACGTCGGGCAGGCGCCGGAAGGGGTTGTCGC
AATCGATACAGCTGAGAGGGCGGGGGCAATTTTCAGGAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig14:2377978..2381366-

>mRNA_P-fluviatile_contig14.2274.1 ID=mRNA_P-fluviatile_contig14.2274.1|Name=mRNA_P-fluviatile_contig14.2274.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2082bp|location=Sequence derived from alignment at P-fluviatile_contig14:2377978..2381366- (Porterinema fluviatile SAG_2381)
ATGGCCGAACAGAGCACAGACATTTTTCACATACATACACACCACGCCAC
ATTTCGGCGCACGTTGGGTCTGCGGACAAGCAGGCAGCTCGTTCGAAGGG
CAGCTCGTCATCCTTCGCGGAGAAGCAGGGCCGACGACGGTGCGGGAGAG
AGCGCGGCTCACAGTCTACCAGCAAGTAAGATGGCCTACGCTACCCACGA
GGCTTCTCGTCACGGATGGCCGAACAGAGCACAGACATTTTTCACATACA
TACACACCACGCCACATTTCGGCGCACGTTGGGTCTGCGGACAAGCAGGC
AGCTCGTTCGAAGGGCAGCTCGTCATCCTTCGCGGAGAAGCAGGGCCGAC
GACGGTGCGGGAGAGAGCGCGGCTCACAGTCTACCAGCAAGTAAGATGGC
CTACGCTACCCACGAGGCTTCTCGTCACGGCTCGTGGCAGCAGCAACAGC
AGCAGCAGGAACAGCAGCGGCAGCAGCCGCCGGAACAGAGGGAGGAGGAT
CACAGTGGTGTCGATGGAGGGGCGAGAGCTGCAGCGCCATCAAGACTCCT
CGTCGAAGGAGAAAAGAGACCGGCTGGGTCGGGCTCAAGGCCGCTATCCG
TCTTGCCATCGCCGCCGCCGCCGCCACCTCCGCTGACCATACTCAAGCAC
AGCAGGAGCGAAGGAATCAGCTTGGTCACCATGGGCACGTCAAGCGGCAA
GAATCCCCACGGGACGGTAAACGGTCCACCGGCACCGTCGTCGTCACTGA
CATCGTGGCGGCAGCCGGTCTCGACCGGCAGCGGTGGCGCTGGAACCGGT
GGCGGTGCGCAAGCGGCGGGAGGGGGTCGGGACGGCAGGCAGCGCAAGAC
CGGAGGGTCTTCTTGGCTGCCGTCGCGCGCACCGGGCCAGCTGTGCGAGC
TGGCGCGGGCGCACAAAACGCTGAACACGAAGCAGCGGGCCACAACGCGT
CGAAGAAGGGTGCACTTCGACCCGTGCGTGCGCATGGTCCTCGTGCCCGC
CCGGAAGGACCTCGACGAGGTGATCGTTCGCGGAGTGTGGTGGAGCGCGG
CGGACGTGGCGCAGTTCCGGTTCGCCGCAACAAAGTTCTTCCTGAGGCAT
GGCGGCGGGACGACTACCAGGAGCCGCCCGATGATAGGCAGCGGCGAGGC
AACCTTGTCCGAGGCAGAGTCAGAAGGAGAAGAAGGCGAGGGCGCAATGC
CGCCGATGGCCGCGCAAAGGGCTGCCGCCAGCGACGCCAAGAAGGCCGCG
GATTAACTCGTGGCAGCAGCAACAGCAGCAGCAGGAACAGCAGCGGCAGC
AGCCGCCGGAACAGAGGGAGGAGGATCACAGTGGTGTCGATGGAGGGGCG
AGAGCTGCAGCGCCATCAAGACTCCTCGTCGAAGGAGAAAAGAGACCGGC
TGGGTCGGGCTCAAGGCCGCTATCCGTCTTGCCATCGCCGCCGCCGCCGC
CACCTCCGCTGACCATACTCAAGCACAGCAGGAGCGAAGGAATCAGCTTG
GTCACCATGGGCACGTCAAGCGGCAAGAATCCCCACGGGACGGTAAACGG
TCCACCGGCACCGTCGTCGTCACTGACATCGTGGCGGCAGCCGGTCTCGA
CCGGCAGCGGTGGCGCTGGAACCGGTGGCGGTGCGCAAGCGGCGGGAGGG
GGTCGGGACGGCAGGCAGCGCAAGACCGGAGGGTCTTCTTGGCTGCCGTC
GCGCGCACCGGGCCAGCTGTGCGAGCTGGCGCGGGCGCACAAAACGCTGA
ACACGAAGCAGCGGGCCACAACGCGTCGAAGAAGGGTGCACTTCGACCCG
TGCGTGCGCATGGTCCTCGTGCCCGCCCGGAAGGACCTCGACGAGGTGAT
CGTTCGCGGAGTGTGGTGGAGCGCGGCGGACGTGGCGCAGTTCCGGTTCG
CCGCAACAAAGTTCTTCCTGAGGCATGGCGGCGGGACGACTACCAGGAGC
CGCCCGATGATAGGCAGCGGCGAGGCAACCTTGTCCGAGGCAGAGTCAGA
AGGAGAAGAAGGCGAGGGCGCAATGCCGCCGATGGCCGCGCAAAGGGCTG
CCGCCAGCGACGCCAAGAAGGCCGCGGATTAA
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