mRNA_P-fluviatile_contig14.2248.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2248.1 vs. uniprot
Match: A0A6H5JFD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD8_9PHAE) HSP 1 Score: 412 bits (1060), Expect = 1.230e-129 Identity = 392/586 (66.89%), Postives = 419/586 (71.50%), Query Frame = 1
Query: 1 MSRRQQGARGASPEEIFAKRRGEIPYQIYFEISNIGRNVESSKKRARWKFCFGEDGREHEVTLVHSLMSGKKRTIFDGELINEAQKVSKEWVFAWSYGAHLLRVGINMEEYELVIDGISFTNFSRRDPYLAAQLEATKRDSMRSLQSDERRRFDRLGYGG-SGSAGGRSRASERRSSGYSXXXXXXXXXXXXXSMGRSGRTDRDGGGQGRRRESLDERGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPRVMKPPSADSSATAGPTATTNEDILSADPSTLEVNPFD-AHVPAASFDPLNRGL-TGGGSAVAGGGYPNGGGXXXXXXXXXXXXXXXXXXXHDSAAVLQLGMQFEAMGMGSHNQHNQYMQPPQQQQA---------YQTPFDEGVYQKQYDQSGFPMPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGKAPAG-------------------------------GPPASTCTDLAKASPDPWDVARAGMVNIDDITDTKHLPAVEVKPYSNDHRPLADLVRETPPQ 1629
M+R+QQ +RG SPE +FAKRRGEIPYQIYFE+SNIGRNVESSKKRARWKFCFGE+GREHEVTL+HSLMSGKK+TIFDGE+INEAQKVSKEWVFAWS+GAHLLRVGIN EEY LVIDGI F NFSRRDPYLAAQLEATKRDSMRSLQ+DE+RRFDRLGYGG SG XXXXXXXXXXXXXS+ R+ R GG R ++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P A A A P T +DILSADPSTLEVNPFD A VP ASFDPL G TG G A G XXXXXXXXXXXXXX DSAAVLQLGMQFEAMGM Q+ Q PQ Q YQTPFD+GVYQ QYDQSGFP+PQQXXXXXXXXXXXXXXXXXXXXXXXX G A G G PA TCT L+KAS DPWD+AR+GMVNIDDITDTKHLPAVEVKP+++DHRPLADLVRE PP+
Sbjct: 1 MNRQQQLSRGPSPEAVFAKRRGEIPYQIYFEVSNIGRNVESSKKRARWKFCFGEEGREHEVTLIHSLMSGKKKTIFDGEVINEAQKVSKEWVFAWSFGAHLLRVGINFEEYGLVIDGIPFKNFSRRDPYLAAQLEATKRDSMRSLQTDEKRRFDRLGYGGESGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLRRASSNRR--GGLDRDQDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAAKPA-AAPAVT--DDILSADPSTLEVNPFDVAQVPVASFDPLTNGKGTGDGMAAPAG------------XXXXXXXXXXXXXXXDSAAVLQLGMQFEAMGMNP-----QFQQQPQHQPXXXXXXXXXQYQTPFDDGVYQ-QYDQSGFPLPQQXXXXXXXXXXXXXXXXXXXXXXXXHAMPATGPFDAPSVGFSGAP-GTAGGGVDFAGGGFLQPTXXXXXXXXXXXXXXXXXSDGSPAVTCTTLSKASTDPWDMARSGMVNIDDITDTKHLPAVEVKPFTDDHRPLADLVREAPPK 562
BLAST of mRNA_P-fluviatile_contig14.2248.1 vs. uniprot
Match: D7G6N2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N2_ECTSI) HSP 1 Score: 170 bits (431), Expect = 4.060e-43 Identity = 83/93 (89.25%), Postives = 89/93 (95.70%), Query Frame = 1
Query: 202 MSGKKRTIFDGELINEAQKVSKEWVFAWSYGAHLLRVGINMEEYELVIDGISFTNFSRRDPYLAAQLEATKRDSMRSLQSDERRRFDRLGYGG 480
MSGKK+TIF+GELINEAQKVSKEWVFAWS+GAHLLRVGIN EEY LVIDGI F NFSRRDPYLAAQLEATKRDSMRSLQ+DE+RRFDRLG+GG
Sbjct: 1 MSGKKKTIFNGELINEAQKVSKEWVFAWSFGAHLLRVGINFEEYGLVIDGIPFKNFSRRDPYLAAQLEATKRDSMRSLQTDEKRRFDRLGFGG 93
BLAST of mRNA_P-fluviatile_contig14.2248.1 vs. uniprot
Match: A0A835YTU3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTU3_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 4.540e-16 Identity = 38/63 (60.32%), Postives = 49/63 (77.78%), Query Frame = 1
Query: 73 PYQIYFEISNIGRNVESSKKRARWKFCFGEDGREHEVTLVHSLMSGKKRTIFDGELINEAQKV 261
P+QIY E++NIG+ VESSKKR W+F FGE+G EHEV L HS +SGKK+ +GE + E+QKV
Sbjct: 39 PFQIYKEVANIGKTVESSKKRICWRFSFGEEGDEHEVVLEHSTLSGKKKLYVNGEQVFESQKV 101
BLAST of mRNA_P-fluviatile_contig14.2248.1 vs. uniprot
Match: W2LEM7_PHYPR (RanBP2-type domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2LEM7_PHYPR) HSP 1 Score: 78.2 bits (191), Expect = 2.940e-11 Identity = 56/163 (34.36%), Postives = 88/163 (53.99%), Query Frame = 1
Query: 82 IYFEISNIGRNVESSKKRARWKFCFGEDGREHEVTLVHSLMSGKKRTIFDGELINEAQKVS-KEWVFAWSY-GAH----LLRVGINMEE-YELVIDGISFTNFSRR-DPYLAAQLE------ATKRDSMRSLQSDERRRFDRLGYG-GSGSAGGRSRASERRS 525
+Y+E+SN+G+ +ESSKKR W+ E+GRE E++L HSL SGKK DG + +Q +S +W + ++ G H +++ +++ + Y+L++DG+SF R DP + + AT+ S S S + GY GS S GG AS S
Sbjct: 20 LYYEVSNVGKTIESSKKRVVWRLKV-EEGREFEISLTHSLASGKKVLRVDGIVKYTSQSLSFGDWDYVFNLPGGHCVHIIIKPSVDLNDMYDLIVDGMSFRRLPNRLDPSKLPKQQDNVVSSATRTGSSGSRNSSFTYNYSNGGYASGSNSRGGSRNASRENS 181
BLAST of mRNA_P-fluviatile_contig14.2248.1 vs. uniprot
Match: A0A1V9ZWY1_9STRA (RanBP2-type domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWY1_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 3.170e-11 Identity = 49/132 (37.12%), Postives = 79/132 (59.85%), Query Frame = 1
Query: 82 IYFEISNIGRNVESSKKRARWKFCFGEDGREHEVTLVHSLMSGKKRTIFDGELINEAQKVSK-EWVFAWSYGAHLLR------VGINMEEYELVIDGISFTNFSRRDPYLAAQLEATKRDSMRSLQSDERRR 456
+Y+EI+N+G+ VE+SKKR W+ E+G+E+E++L HS+ SGKK DG + ++ S +W + ++ G H+L V +N + Y+L++DG+SF RR P E K S+R+LQS + R
Sbjct: 24 LYYEIANVGKMVEASKKRITWRIKV-EEGKEYEISLTHSIASGKKILRVDGIVAYQSTAFSLGDWDYVFNLGNHVLHCIIKPSVELN-DSYDLIVDGVSF----RRLPEQLKPKE--KNPSVRTLQSKPKSR 147
BLAST of mRNA_P-fluviatile_contig14.2248.1 vs. uniprot
Match: A0A0W8BV35_PHYNI (Sphingomyelin phosphodiesterase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8BV35_PHYNI) HSP 1 Score: 78.2 bits (191), Expect = 5.870e-11 Identity = 56/163 (34.36%), Postives = 88/163 (53.99%), Query Frame = 1
Query: 82 IYFEISNIGRNVESSKKRARWKFCFGEDGREHEVTLVHSLMSGKKRTIFDGELINEAQKVS-KEWVFAWSY-GAH----LLRVGINMEE-YELVIDGISFTNFSRR-DPYLAAQLE------ATKRDSMRSLQSDERRRFDRLGYG-GSGSAGGRSRASERRS 525
+Y+E+SN+G+ +ESSKKR W+ E+GRE E++L HSL SGKK DG + +Q +S +W + ++ G H +++ +++ + Y+L++DG+SF R DP + + AT+ S S S + GY GS S GG AS S
Sbjct: 429 LYYEVSNVGKTIESSKKRVVWRLKV-EEGREFEISLTHSLASGKKVLRVDGIVKYTSQSLSFGDWDYVFNLPGGHCVHIIIKPSVDLNDMYDLIVDGMSFRRLPNRLDPSKLPKQQDNVVSSATRTGSSGSRNSSFTYNYSNGGYASGSNSRGGSRNASRENS 590
BLAST of mRNA_P-fluviatile_contig14.2248.1 vs. uniprot
Match: A0A067C0H7_SAPPC (RanBP2-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C0H7_SAPPC) HSP 1 Score: 77.0 bits (188), Expect = 5.870e-11 Identity = 38/100 (38.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 82 IYFEISNIGRNVESSKKRARWKFCFGEDGREHEVTLVHSLMSGKKRTIFDGELINEAQKVSK-EWVFAWSYGAHLLR------VGINMEEYELVIDGISF 360
+Y+EI+N+G+ VE+SKKR W+ E+G+E+E++L HS+ SGKK DG ++ + S +W + ++ G H+L V +N + Y+L++DG+SF
Sbjct: 24 LYYEIANVGKMVEASKKRITWRIKM-EEGKEYEISLTHSIASGKKNLRIDGIVMYQTSTFSLGDWDYVFNLGNHVLHCIIKPSVELN-DSYDLIVDGVSF 121
BLAST of mRNA_P-fluviatile_contig14.2248.1 vs. uniprot
Match: A0A6G0WGT2_9STRA (RanBP2-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGT2_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 7.260e-11 Identity = 37/99 (37.37%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 82 IYFEISNIGRNVESSKKRARWKFCFGEDGREHEVTLVHSLMSGKKRTIFDGELINEAQKVSK-EWVFAWSYGAHLLRVGINM-----EEYELVIDGISF 360
+Y+EI+N+G+ VE+SKKR W+ E+G+E+E++L HS+ SGKK DG + ++ S +W + ++ G H++ + I + Y+L++DGISF
Sbjct: 24 LYYEIANVGKVVEASKKRITWRIKM-EEGKEYEISLTHSIASGKKVLRIDGIVTYQSSSFSLGDWDYCFNLGNHVIHILIKPSVELNDSYDLIVDGISF 121
BLAST of mRNA_P-fluviatile_contig14.2248.1 vs. uniprot
Match: A0A1V9YNT7_9STRA (RanBP2-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNT7_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.270e-10 Identity = 39/100 (39.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query: 82 IYFEISNIGRNVESSKKRARWKFCFGEDGREHEVTLVHSLMSGKKRTIFDGELINEAQKVSK-EWVFAWSYGAHLLR------VGINMEEYELVIDGISF 360
+Y+EI+N+G+ VE+SKKR W+ E+G+E+E++L HS+ SGKK DG + + S +W + ++ G H+L V +N + Y+L++DGISF
Sbjct: 24 LYYEIANVGKMVEASKKRITWRIKV-EEGKEYEISLTHSIASGKKSLRIDGIVTYQTSTFSLGDWDYVFNLGNHVLHCIIKPSVELN-DSYDLIVDGISF 121
BLAST of mRNA_P-fluviatile_contig14.2248.1 vs. uniprot
Match: A0A8J5IR68_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IR68_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 4.300e-10 Identity = 42/109 (38.53%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 82 IYFEISNIGRNVESSKKRARWKFCFGEDGREHEVTLVHSLMSGKKRTIFDGELINEAQKVS-KEWVFAWSY-GAH----LLRVGINMEE-YELVIDGISFTNFSRR-DP 384
+YFE+SN+G+ +ESSKKR W+ E+GRE E++L HSL SGKK DG + +Q +S +W + ++ G H +++ +++ + Y+L++DG+SF R DP
Sbjct: 3337 LYFEVSNVGKTIESSKKRVVWRLKV-EEGREFEISLTHSLASGKKVLRIDGIVKYTSQSLSFGDWDYVFNLAGGHCVHIIIKPSVDLNDMYDLIVDGMSFRRLPNRLDP 3444 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2248.1 >prot_P-fluviatile_contig14.2248.1 ID=prot_P-fluviatile_contig14.2248.1|Name=mRNA_P-fluviatile_contig14.2248.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=622bp MSRRQQGARGASPEEIFAKRRGEIPYQIYFEISNIGRNVESSKKRARWKFback to top mRNA from alignment at P-fluviatile_contig14:2149834..2161694+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2248.1 ID=mRNA_P-fluviatile_contig14.2248.1|Name=mRNA_P-fluviatile_contig14.2248.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11861bp|location=Sequence derived from alignment at P-fluviatile_contig14:2149834..2161694+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:2149834..2161694+ >mRNA_P-fluviatile_contig14.2248.1 ID=mRNA_P-fluviatile_contig14.2248.1|Name=mRNA_P-fluviatile_contig14.2248.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3732bp|location=Sequence derived from alignment at P-fluviatile_contig14:2149834..2161694+ (Porterinema fluviatile SAG_2381)back to top |