mRNA_P-fluviatile_contig14.2247.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.2247.1
Unique NamemRNA_P-fluviatile_contig14.2247.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig14.2247.1 vs. uniprot
Match: A0A6H5JGP2_9PHAE (Rho-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP2_9PHAE)

HSP 1 Score: 633 bits (1632), Expect = 3.730e-225
Identity = 330/405 (81.48%), Postives = 362/405 (89.38%), Query Frame = 1
Query:   97 MRDGLRDIQAQVRNFVLATERLFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGLTEYLEAPLKAVLDFCEVIDALAKRRQQLLLDYDHHKRKHEAVEARREAGKG-DMDEEIKARSTKLNVSIDNLKDCTAQILAQVAALAKVEPQLKESLFKGLAACQVFYCQASLSAFETDFVQSPDMQDYVASLQRATSALEKSMPLPPLGEHVAYLENALASAAAEARGEGEVGAVFKRPLSDFEEPPPVLIECMGFLDAHGLYVPGLFRVAGNTETIRQIKSRFDDGENVEFDERIHNVHEVATLLKMYFRELPDPVVPTTHYRTMLEACAKPQPEFVEMARGCVAQFPKINCTCLRLLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNATDMNVMDLQ 1308
            MRDGL+DIQAQVRN+VLA E LFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGLTEYLEAPLKAVLDFC+ ID LAK+R QLLLDYDHHKRKHEA  ARRE+GKG DM++E+KARSTKLN SIDNLKDCT QILAQVAAL+KVEPQLKESLFKGL+ACQVFYCQASLSAFETDFV+S DM+DYV SLQ  T+ LE SMPLPPLGEHVA+L NALASAAAE RGEG++G V+ RPLSD EEPPP+L+EC+GFLDA+GLYVPGLFRV G+TE I+Q+KS FD GE+VEFDERIH+VHEVATLLKMYFRELP+PVVPT  Y  MLEA     PEFVE  R  VAQ P+IN TC+RLLFAFL RVSL SA+N MTTENLGIVFAPNLLRAPNAT++NVMDLQ
Sbjct:    1 MRDGLKDIQAQVRNYVLAMEGLFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGLTEYLEAPLKAVLDFCDGIDLLAKQRGQLLLDYDHHKRKHEA--ARRESGKGGDMEDEVKARSTKLNASIDNLKDCTTQILAQVAALSKVEPQLKESLFKGLSACQVFYCQASLSAFETDFVESTDMRDYVMSLQSTTTTLENSMPLPPLGEHVAFLRNALASAAAEVRGEGKLGYVYGRPLSDLEEPPPLLLECIGFLDANGLYVPGLFRVPGSTEKIQQLKSTFDAGEHVEFDERIHDVHEVATLLKMYFRELPEPVVPTAFYHPMLEA--SDLPEFVETVRVLVAQLPEINRTCVRLLFAFLLRVSLLSAENLMTTENLGIVFAPNLLRAPNATEINVMDLQ 401          
BLAST of mRNA_P-fluviatile_contig14.2247.1 vs. uniprot
Match: D7G3V4_ECTSI (Rho-GAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3V4_ECTSI)

HSP 1 Score: 490 bits (1262), Expect = 2.150e-169
Identity = 283/449 (63.03%), Postives = 303/449 (67.48%), Query Frame = 1
Query:    1 VGEKAIQKIGLAVPSNDANTGDIAQPWNSFCHMRDGLRDIQAQVRNFVLATERLFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGLTEYLEAPLKAVLDFCEVIDALAKRRQQLLLDYDHHKRKHEAVEARREAGKG-DMDEEIKARSTKLNVSIDNLKDCTAQILAQVAALAKVEPQLKESLFKGLAACQVFYCQASLSAFETDFVQSPDMQDYVASLQRATSALEKSMPLPPLGEHVAYLENALASAAAEARGEGEVGAVFKRPLSDFEEPPPVLIECMGFLDAHGLYVPGLFRVAGNTETIRQIKSRFDDGENVEFDERIHNVHEVATLLKMYFRELPDPVVPTTHYRTMLEACAKPQPEFVEMARGCVAQFPKINCTCLRLLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNATDMNVMDLQVSTWASARAVNH 1344
            VGEKAI KIGLA PSNDANTGDI QP +SF  MRDGL+DIQAQVRN+VLA E LFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGLTEYLEAPLKAVLDFC+ ID LAKRR QLLLDY HHKRKHEAVEARRE+GKG DM+EE+KARSTKLN SIDNLKDCT QILAQVAAL+K                      ASLSAFETDFV+S DM+DYV +LQ  T+ LE SMPLPPLGEHVA+L NAL                                                                            IH+VHEVATLLKMYFRELP+PVVPT  Y  MLEA  K   EFVE  R  VAQ P+IN TC+RLLFAFL RVSL SA+N MTTENLGIVFAPNLLRAPNAT+MNVMDLQ +     R  NH
Sbjct:    4 VGEKAILKIGLAAPSNDANTGDIEQPLHSFVQMRDGLKDIQAQVRNYVLAMEGLFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGLTEYLEAPLKAVLDFCDGIDLLAKRRGQLLLDYGHHKRKHEAVEARRESGKGGDMEEEVKARSTKLNASIDNLKDCTTQILAQVAALSK----------------------ASLSAFETDFVESTDMRDYVMNLQSTTTTLENSMPLPPLGEHVAFLRNAL----------------------------------------------------------------------------IHDVHEVATLLKMYFRELPEPVVPTAFYYPMLEASVKDLTEFVETVRVLVAQLPEINRTCVRLLFAFLLRVSLLSAENLMTTENLGIVFAPNLLRAPNATEMNVMDLQRAVVRLDRKDNH 354          
BLAST of mRNA_P-fluviatile_contig14.2247.1 vs. uniprot
Match: A0A836CHK5_9STRA (Rho GTPase activation protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHK5_9STRA)

HSP 1 Score: 248 bits (633), Expect = 8.550e-73
Identity = 181/530 (34.15%), Postives = 264/530 (49.81%), Query Frame = 1
Query:   25 IGLAVPSNDANTGDIAQPWNSFCHMRDGLRDIQAQVRNFVLATERLFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGLTEYLEAPLKAVLDFCEVIDALAKRRQQLLLDYDHHKRKHEAVEAR--------------------REAGKGDMDE-EIKARSTKLNVSIDNLKDCTAQILAQVAALAKVEPQLKESLF------------------KGLAACQVFYCQASLSAFETD-FVQSPDMQDYVASLQRATSALEKSMPLPPLGEHVAYLENALASAAAEAR--------------------------GEGEVGA-----------------------------VFKRPLSDFEEPPPVLIECMGFLDAHGLYVPGLFRVAGNTETIRQIKSRFDDGENVE------FDERIHNVHEVATLLKMYFRELPDPVVPTTHYRTMLEACAKPQPEFVEM-ARGCVAQFPKINCTCLRLLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNATDMNVMDLQ 1308
            +GLA PSND N+  +  P   F   RD L  +Q QV+ +++A E  F  A ++TFL AP +G+TA+ ++ +L +  V +A+++G+ E+L APL+AVL FC+ +DAL K R  L+LDYDHHKRK  A+  R                    R A   D DE ++ AR  KL+ +  +L+  T ++LA++AALA+V  QL ES                    +GLAAC  +    + +  E    + + D+ + VA++ RA +  +    +P   E    + +ALA+AA EAR                          G+ E GA                             +F R LS ++ PP  +   + FLDA+ LY   LFR  G+ ET+ ++K + D             +   H+ H+ + LLKM+FRELP+P+ P   Y   LEA            AR  +A+ P I+  C RLLFA L+RV+LC+ DNKM  ENLGIVFAPNLLR+ +A +  V DLQ
Sbjct:    1 MGLANPSNDENSASLEAPLAEFNQTRDNLALMQKQVKAYMVAVEAEFTMAQHLTFLHAPHTGDTAQFVEAALAKNPVHEALMKGMHEWLCAPLQAVLAFCDEVDALTKARAALVLDYDHHKRKLAAIAQRIAXXXXXXXXXXXXXXXXXVRRASTLDADEKDLTARQAKLDATTADLRGATTELLARLAALAQVHCQLHESTIACXXXXXXXXXXXXXXVCRGLAACTAYRAAEAAAPLEVGGLLAARDVAECVAAM-RACAETDGRAAIP--AEQELCVRDALAAAADEARAMQAASATSSPRSATAACSPAAADAWGDSEGGARGFRSGSSVTARRPSETPXXXXXXXARGALFGRSLSTWDAPPAPVRHLVHFLDANALYTRFLFRQPGSAETVAELKRQLDGXXXXXXXXXXXLEPGAHDAHDASALLKMFFRELPEPLFPAAQYAAALEAXXXXXXXXXXARARALLARAPPIHEACARLLFALLHRVNLCATDNKMPAENLGIVFAPNLLRSADAGEPCVADLQ 527          
BLAST of mRNA_P-fluviatile_contig14.2247.1 vs. uniprot
Match: A0A835YT43_9STRA (Rho GTPase activation protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT43_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.880e-66
Identity = 184/556 (33.09%), Postives = 241/556 (43.35%), Query Frame = 1
Query:   28 GLAVPSNDANTGDIAQPWNSFCHMRDGLRDIQAQVRNFVLATERLFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGLTEYLEAPLKAVL-------------------------------------DFCEVIDALAKRRQQLLLDYDHHKRKHEAVEARREAG-------KGDMDEEIKA-RSTKLNVSIDNLKDCTAQILAQVAALAKVEPQLKESLFKGLAACQVFYCQASLSAFETD--------------------------------FVQSPDMQDYVASLQRATSALEKSMPLPPLGEHVAYLENALASAAAEARGEGEVGAVFKRPLSDFEEPPPVLIECMGFLDAHGLYVPGLFRVAGNTETIRQIKSRFDDGENVEFDE-------------------------------RI-HNVHEVATLLKMYFRELPDPVVPTTHYRTMLEACAKPQ-----PE---------------FVEMARGCVAQFPKINCTCLRLLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNATDMNVMDLQ 1308
            GL  PSND N+G+I  P   F  +RD L  +Q+Q+  +V ATE  F AA  +TFL AP +G+ AK +K +LC   V DA+IRG+ E+L APL+AVL                                      +C+  DALAKRR  L+LDYDHHKRK  A + R  A          D DE   A R  KL  S ++L+  TA +LA +AAL++VE  L++++ +GLAA              T                                                                            A  EA      GA+F R L+ +  PPP L E + +LDAHGLYV GLFR+    + +  +K R+D GE V  D                                R+ H+VH++A LLKM+FRELP+P++P   YR  L+A A P      P+                   AR  +A  P     C RLLFA L+RV LC+ DNKMT ENLGIVFAPNLLR   A    + +LQ
Sbjct:   25 GLTNPSNDENSGNIDAPLAEFARLRDDLSLMQSQIAAYVGATEAEFVAARQLTFLHAPRAGDAAKHVKAALCTSCVHDAVIRGMREHLCAPLRAVLLSLAVTRNCCTSGQPHLMLLFAPRASLIRSAVSVSVTAWCDTTDALAKRRAALVLDYDHHKRKLAAAQQRAAAAHATGRRASADTDERDAALRQAKLAASTNDLRATTADLLAHIAALSRVERALRDAVCRGLAAAXXXXXXXXRLRRWTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELEAH---PPGALFGRSLAAWSAPPPPLREWVAYLDAHGLYVRGLFRLPAALDDVSDLKRRYDAGEAVALDAVSSSSGXXXXXXXXXXXXXXXXXXASGFAAPRLRHSVHDIAALLKMFFRELPEPLIPAASYRAALDAAAAPALAAAAPDGSGAVAXXXXXXXXXXXXXARPLLAALPPTPRACARLLFALLHRVHLCAGDNKMTAENLGIVFAPNLLRPAEAGQPTMAELQ 577          
BLAST of mRNA_P-fluviatile_contig14.2247.1 vs. uniprot
Match: A0A7S2WAA0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WAA0_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.180e-24
Identity = 108/379 (28.50%), Postives = 167/379 (44.06%), Query Frame = 1
Query:  283 EYLEAPLKAVLDFCEVIDALAKRRQQLLLDYDHHKRKHEAVEAR----------------------REAGKGDMDEEIKARSTKLNVSIDNLKDCTAQILAQVAALAKVEPQ--LKESLFKGLAACQVFYCQASLSAFETDFVQSPDMQDYVASLQRATSALEKSMPLPPLGEHVAYLENALASAAAEARGEGEVGAVFKRPLSDFEEPPPVLIECMGFLDAHGLYVPGLFRVAGNTETIRQIKSRFDDGENVEFDERIH--NVHEVATLLKMYFRELPDPVVPTTHYRTMLEACAKP----QPEFVEMARGCVAQFPKINCTCLRLLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNATDMNVM--DLQVSTWA 1323
            E ++A  + +L     ++   + R++L+LDY+   RK+E    R                      R   + ++ EEI  R  KL  +   +  CT  IL Q   +A+      + E     L ACQ+     +    E        ++ +  +L R      K+  L   G  VA++ N+    A + +   E   VF  PL        V+ EC+ FL   GL   G+FRV GN   +  I+ R+D GE     +  H   VH+V TLLK++ RELP+PV+PT +Y  ++           P+        V   P I+   L  L +FL  VS    +NKM+  NL   FAP+L+RAP  T++NV+  D+Q +  A
Sbjct:   84 EEVKAATELLLWQVPEVEDKVRHRKKLVLDYNAQLRKYEHACGRTAQVEYSDMEKGSKKSLKNALYRRKSESEIAEEIANRKIKLEEAELAVDKCTKWILQQFQEIAEKRRTGTILEGPMSALLACQLHLSSHTSQRLEVVKPSFQSVESFATTLARYDKEPPKTHTLDVEG--VAHITNS----ATKRKTVTEDTHVFGVPLE--ASSSIVVSECIAFLQETGLTTEGMFRVPGNQLNVDLIRQRYDKGEKGVISDPKHPARVHDVCTLLKLWMRELPEPVIPTNYYEKLMSLVRSDLKGEDPKTTLHVIAFVDDLPTIHQQLLGTLVSFLDDVSQKKDENKMSAANLATCFAPSLMRAPEGTEINVILQDMQAAITA 454          
BLAST of mRNA_P-fluviatile_contig14.2247.1 vs. uniprot
Match: A0A2R5GAF7_9STRA (Rho GTPase activating protein, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAF7_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.100e-23
Identity = 121/487 (24.85%), Postives = 207/487 (42.51%), Query Frame = 1
Query:    7 EKAIQKIGLAVPSNDANTGDIAQPWNSFCHMRDGLRDIQAQVRNFVLATERLFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGLTEYLEAPLKAVLDFC-----EVIDALAKRRQQLLLDYDHHKRKHE-------AVEARREAG----------------KGDMDEEIKARSTKLNVSIDNLKDCTAQILAQVAALAKVEPQ--LKESLFKGLAACQVFYCQASLSAFET--DFVQSPDMQDYVASLQRATSALEKSMPLPPLGEHVAYLENALASAAAEARGEGEVGAVFKRPLSDFEEPPPVLIECMGFLDAHGLYVPGLFRVAGNTETIRQIKSRFDDGEN---VEFDERIHNVHEVATLLKMYFRELPDPVVPTTHYRTMLEAC----AKPQPEFVEMARGCVAQFPKINCTCLRLLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNATDMNVM--DLQVSTWASARAVNH 1344
            ++A+Q +G+A  + D++  +    + + C     LR       + + A +    A       F   +      + L       +   +  +    E  + A  +       EV D + +RR++LLLDYD H RK+E        ++ R E G                +  + EEI  R  K+  +   + + T  ++ Q   +        L +     L ACQ+ Y + +++  E      +S D+  + A+LQR      ++  L   G  +A + N L +     +     G  F  PLS     PPV+ + + F+ A GL+V G+FRV+ + + + Q+++ +DDG     V  D  + +VH+ A LLK++FRELP P++PT  Y +++       +   P  V          P +N   L  L   L  V+     NKM+  NL    AP+LLRAP     N++  D+Q S  A    + H
Sbjct:   13 QQALQTLGVAEATEDSDFKEDYYAYKNTCVALKSLRKSMEVHLDTIRAMQASAAALTVELAAFHQHTQAAKATVALGQAHAEAERVNLASVERLYEEEVTAATELLLWQVPEVEDNI-RRRKKLLLDYDAHLRKYENAARAANEMQDRTEKGGNKAATGKLPFTRRKSESQIAEEITQRKVKVEQAEAAVDESTKWLMEQFEEMDSHHQSGALLKGPMSALLACQLHYLRETMTRLEEVKPLFESTDL--FAATLQRYDKEPPRAQELDVEG--MANITN-LNATVRRRKTHRPQGVAFGLPLSS--STPPVVCDAIAFIRAKGLHVEGIFRVSASKDVLDQLRALYDDGAQGAIVRTDFEV-SVHDAAGLLKLWFRELPHPLIPTEQYESLVSLVRGDVSLENPLTVSAVLEFSTSLPAVNRELLGFLAKLLAEVADHEPSNKMSAGNLATCLAPSLLRAPEDVPPNIVLRDMQASIAAIKVFIMH 490          
BLAST of mRNA_P-fluviatile_contig14.2247.1 vs. uniprot
Match: UPI0009A40F2E (rho GTPase-activating protein 22-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A40F2E)

HSP 1 Score: 105 bits (262), Expect = 2.240e-22
Identity = 62/158 (39.24%), Postives = 88/158 (55.70%), Query Frame = 1
Query:  841 PVLIE-CMGFLDAHGLYVPGLFRVAGNTETIRQIKSRFDDGENVEFDERIHNVHEVATLLKMYFRELPDPVVPTTHYRTMLEAC---AKPQPEFVEMARGCVAQFPKINCTCLRLLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNATDMNVMD 1302
            P+L+E C+ F+  HGL   GLFR+ G    +++++  FD GE   FD R  +VH VA+LLK+Y RELP+PV+P   Y   L      AK Q E V+     V   P+ N   L+ +  FL  V   S+ NKM+ +NL  VF PN+LR      + +M+
Sbjct:   85 PLLVEQCVDFIREHGLTEEGLFRMPGQANLVKELQDSFDCGEKPLFD-RNTDVHTVASLLKLYLRELPEPVIPFAKYEDFLSCAQLLAKDQEEGVQELIKQVTNLPQANYNLLKYICRFLDEVQSYSSVNKMSVQNLATVFGPNILRPKLEDPVTIME 241          
BLAST of mRNA_P-fluviatile_contig14.2247.1 vs. uniprot
Match: A0A1A8U8T4_NOTFU (Rho GTPase activating protein 22 n=16 Tax=Nothobranchiidae TaxID=405002 RepID=A0A1A8U8T4_NOTFU)

HSP 1 Score: 110 bits (276), Expect = 2.390e-22
Identity = 64/149 (42.95%), Postives = 90/149 (60.40%), Query Frame = 1
Query:  841 PVLIE-CMGFLDAHGLYVPGLFRVAGNTETIRQIKSRFDDGENVEFDERIHNVHEVATLLKMYFRELPDPVVPTTHYRTMLEACAKP-----QPEFVEMARGCVAQFPKINCTCLRLLFAFLYRVSLCSADNKMTTENLGIVFAPNLLR 1269
            PVL+E C+ F+  HGL   GLFR  G T  +R+++  FD GE   FD    +VH VA+LLK+Y RELP+P++P + Y T   +CA+P     +   VE+ +  V   P++N   L+ +  FL  V L S DNKM+ +NL  VF PN+LR
Sbjct:  173 PVLVEQCVCFIRQHGLKEEGLFRAPGQTNHVRELQDSFDRGEKPVFDSST-DVHTVASLLKLYIRELPEPIIPFSKY-TQFISCAQPLTKDKETGIVELGKQ-VKSLPQVNYNILKYICMFLDEVQLHSNDNKMSVQNLATVFGPNILR 318          
BLAST of mRNA_P-fluviatile_contig14.2247.1 vs. uniprot
Match: A0A6B2LGC1_9EUKA (Rho-GAP domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LGC1_9EUKA)

HSP 1 Score: 103 bits (258), Expect = 2.450e-22
Identity = 55/158 (34.81%), Postives = 91/158 (57.59%), Query Frame = 1
Query:  808 KRPLSDFEEPPPVLIECMGFLDAHGLYVPGLFRVAGNTETIRQIKSRFDDGENVEFDERIHNVHEVATLLKMYFRELPDPVVPTTHYRTMLEACAKPQPEFVE-MARGCVAQFPKINCTCLRLLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPN 1278
            K P++ F++ P ++   + +L  HG    G+FR++G  +TI +IK+ +D G  ++F      VH +A +LK+Y RELPDP++  + Y+  +E+      E  +   +  + Q P IN   L LL      +++ SA+NKMT  NL I  APN+L+AP+
Sbjct:    2 KHPMNRFKDIPIIVSNAVNYLSIHGPKTEGIFRLSGKMQTIEEIKTSYDRGVPIDFQNETE-VHAIAGILKLYLRELPDPLLCFSSYKQWIESYCPTDIEGTKHKMKVLLGQLPTINRNILALLMRLCAAITVHSAENKMTFSNLAICLAPNILKAPD 158          
BLAST of mRNA_P-fluviatile_contig14.2247.1 vs. uniprot
Match: UPI000973358F (rho GTPase-activating protein 22 isoform X6 n=1 Tax=Esox lucius TaxID=8010 RepID=UPI000973358F)

HSP 1 Score: 107 bits (267), Expect = 3.110e-22
Identity = 78/225 (34.67%), Postives = 115/225 (51.11%), Query Frame = 1
Query:  649 DMQDYVASLQRATSALEKSMPLPPLGEHV--AYLENALASAAAEARGEGEVGAVFKRPLSDFEEPP--PVLIE-CMGFLDAHGLYVPGLFRVAGNTETIRQIKSRFDDGENVEFDERIHNVHEVATLLKMYFRELPDPVVPTTHYRTML---EACAKPQPEFVEMARGCVAQFPKINCTCLRLLFAFLYRVSLCSADNKMTTENLGIVFAPNLLRAPNATDMNVM 1299
            DM+D+V +++RA  A        PLG  +   +LE+ +   +    G                 PP  P+L++ C+ F+  HGL   GLFR+ G T  +R+++  FD G+   FD    +VH VA+LLK+Y RELP+PVVP  +Y   L   +  AK Q E ++     V   P++N   LR +  FL  V   ++ NKM+ +NL  VF PN+LR P   D   M
Sbjct:  127 DMEDWVKAIRRAIWA--------PLGWGIFGQHLEDTVKCESGSVSG---------------GNPPLVPLLVQQCVRFIRQHGLTEEGLFRMPGQTNHVRELQDAFDCGDKPLFDSNT-DVHTVASLLKLYLRELPEPVVPYKNYTDFLVTAQLLAKDQEEGIQELARQVKALPQVNYNLLRYICRFLDEVQSHASQNKMSVQNLATVFGPNILR-PKLEDPQTM 326          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGP2_9PHAE3.730e-22581.48Rho-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
D7G3V4_ECTSI2.150e-16963.03Rho-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CHK5_9STRA8.550e-7334.15Rho GTPase activation protein n=1 Tax=Tribonema mi... [more]
A0A835YT43_9STRA1.880e-6633.09Rho GTPase activation protein n=1 Tax=Tribonema mi... [more]
A0A7S2WAA0_9STRA1.180e-2428.50Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A2R5GAF7_9STRA1.100e-2324.85Rho GTPase activating protein, putative n=1 Tax=Ho... [more]
UPI0009A40F2E2.240e-2239.24rho GTPase-activating protein 22-like n=1 Tax=Rhin... [more]
A0A1A8U8T4_NOTFU2.390e-2242.95Rho GTPase activating protein 22 n=16 Tax=Nothobra... [more]
A0A6B2LGC1_9EUKA2.450e-2234.81Rho-GAP domain-containing protein n=1 Tax=Arcella ... [more]
UPI000973358F3.110e-2234.67rho GTPase-activating protein 22 isoform X6 n=1 Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:2139853..2147793 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score490.0
Seed ortholog evalue1.2e-135
Seed eggNOG ortholog2880.D7G3V4
EggNOG free text desc.GTPase activator activity
EggNOG OGsKOG4270@1,KOG4270@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons10
Model size1346
Cds size1344
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2247.1prot_P-fluviatile_contig14.2247.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 2139853..2147793 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815624.36433-CDS-P-fluviatile_contig14:2139852..21401011622815624.36433-CDS-P-fluviatile_contig14:2139852..2140101Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2139853..2140101 -
1693562515.603381-CDS-P-fluviatile_contig14:2139852..21401011693562515.603381-CDS-P-fluviatile_contig14:2139852..2140101Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2139853..2140101 -
1622815624.3767443-CDS-P-fluviatile_contig14:2140753..21408641622815624.3767443-CDS-P-fluviatile_contig14:2140753..2140864Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2140754..2140864 -
1693562515.6123137-CDS-P-fluviatile_contig14:2140753..21408641693562515.6123137-CDS-P-fluviatile_contig14:2140753..2140864Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2140754..2140864 -
1622815624.387806-CDS-P-fluviatile_contig14:2141714..21418351622815624.387806-CDS-P-fluviatile_contig14:2141714..2141835Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2141715..2141835 -
1693562515.6194792-CDS-P-fluviatile_contig14:2141714..21418351693562515.6194792-CDS-P-fluviatile_contig14:2141714..2141835Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2141715..2141835 -
1622815624.4001324-CDS-P-fluviatile_contig14:2142418..21425251622815624.4001324-CDS-P-fluviatile_contig14:2142418..2142525Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2142419..2142525 -
1693562515.6268606-CDS-P-fluviatile_contig14:2142418..21425251693562515.6268606-CDS-P-fluviatile_contig14:2142418..2142525Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2142419..2142525 -
1622815624.4163969-CDS-P-fluviatile_contig14:2142894..21430441622815624.4163969-CDS-P-fluviatile_contig14:2142894..2143044Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2142895..2143044 -
1693562515.6404552-CDS-P-fluviatile_contig14:2142894..21430441693562515.6404552-CDS-P-fluviatile_contig14:2142894..2143044Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2142895..2143044 -
1622815624.4293382-CDS-P-fluviatile_contig14:2143958..21440241622815624.4293382-CDS-P-fluviatile_contig14:2143958..2144024Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2143959..2144024 -
1693562515.6516492-CDS-P-fluviatile_contig14:2143958..21440241693562515.6516492-CDS-P-fluviatile_contig14:2143958..2144024Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2143959..2144024 -
1622815624.4413817-CDS-P-fluviatile_contig14:2144979..21451111622815624.4413817-CDS-P-fluviatile_contig14:2144979..2145111Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2144980..2145111 -
1693562515.6587253-CDS-P-fluviatile_contig14:2144979..21451111693562515.6587253-CDS-P-fluviatile_contig14:2144979..2145111Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2144980..2145111 -
1622815624.4538274-CDS-P-fluviatile_contig14:2145557..21457401622815624.4538274-CDS-P-fluviatile_contig14:2145557..2145740Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2145558..2145740 -
1693562515.6666818-CDS-P-fluviatile_contig14:2145557..21457401693562515.6666818-CDS-P-fluviatile_contig14:2145557..2145740Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2145558..2145740 -
1622815624.4686346-CDS-P-fluviatile_contig14:2146453..21465491622815624.4686346-CDS-P-fluviatile_contig14:2146453..2146549Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2146454..2146549 -
1693562515.6752653-CDS-P-fluviatile_contig14:2146453..21465491693562515.6752653-CDS-P-fluviatile_contig14:2146453..2146549Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2146454..2146549 -
1622815624.4826164-CDS-P-fluviatile_contig14:2147664..21477931622815624.4826164-CDS-P-fluviatile_contig14:2147664..2147793Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2147665..2147793 -
1693562515.6842008-CDS-P-fluviatile_contig14:2147664..21477931693562515.6842008-CDS-P-fluviatile_contig14:2147664..2147793Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 2147665..2147793 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.2247.1

>prot_P-fluviatile_contig14.2247.1 ID=prot_P-fluviatile_contig14.2247.1|Name=mRNA_P-fluviatile_contig14.2247.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=448bp
VGEKAIQKIGLAVPSNDANTGDIAQPWNSFCHMRDGLRDIQAQVRNFVLA
TERLFGAAHNMTFLFAPLSGETAKQLKLSLCRVAVQDAMIRGLTEYLEAP
LKAVLDFCEVIDALAKRRQQLLLDYDHHKRKHEAVEARREAGKGDMDEEI
KARSTKLNVSIDNLKDCTAQILAQVAALAKVEPQLKESLFKGLAACQVFY
CQASLSAFETDFVQSPDMQDYVASLQRATSALEKSMPLPPLGEHVAYLEN
ALASAAAEARGEGEVGAVFKRPLSDFEEPPPVLIECMGFLDAHGLYVPGL
FRVAGNTETIRQIKSRFDDGENVEFDERIHNVHEVATLLKMYFRELPDPV
VPTTHYRTMLEACAKPQPEFVEMARGCVAQFPKINCTCLRLLFAFLYRVS
LCSADNKMTTENLGIVFAPNLLRAPNATDMNVMDLQVSTWASARAVNH
back to top

mRNA from alignment at P-fluviatile_contig14:2139853..2147793-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.2247.1 ID=mRNA_P-fluviatile_contig14.2247.1|Name=mRNA_P-fluviatile_contig14.2247.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7941bp|location=Sequence derived from alignment at P-fluviatile_contig14:2139853..2147793- (Porterinema fluviatile SAG_2381)
GTCGGGGAAAAGGCGATCCAAAAGATTGGTCTCGCGGTGCCTAGTAACGA CGCCAACACCGGGGACATTGCTCAGCCGTGGAATAGCTTCTGTCACATGA GGGACGGCCTCAGAGATATACAAGCACAGGTGAGAGAGAAAGTGGATCCA AAACTTTGCAGTCGGCGAGCCGGTCGAGAGTGCAGGCAGTACGCTGCACG CCCAACACTGCGGCAAGCAATGCAATGCACTCTCGCCAAGTCTGATGGAC TATCTGAACGCCGGGGGACCTAGTTTGGGCTCTCACCACTTACCAGTAGG GGGAGGGGGGCTTGGTTCTACTGGAATGTGGCAAAGTCATCCCGTCTGCA CCTTGGCGAGCACCGGCACCTTCAGAAATTTCGGGGAGAAGCCGGTCCCG GTGTGGGCATGAGCGTTCATTGATTGTTATCACCAAACTACTTTTTCTAG TAGGTTATGTTCGATCGCCAACGCCTACCTCCCCTCCCCCACTGCTATAC GTGAGTGTTGCGCGAGAAGAGGTCAGCAACGTTGAAACCGTTCCTCTATC CGTCGCACACGGCTGTGGCACGTTGGGCACCGACAGGGTTACGTATCACG CGTCGAATAACCCGATGGGAATGCTGTTTAGGACAGGAGCGGTGTATCGC ACGACGACAAAAATCTGTGTAAAGGCCGGGTCATAGGCGCAAGTTCTTGA CTTGTTTACGAGGTGTTTTGGCCACGTAAACAATATGAACGCCCGGCCAA GTCGCACCCCCTCGAGGTAAGGACTGCTGTGGTGATTCTTTGGGGGAACT TACAGGGTGGTCGGGCTTGCACGAAATGATAGTTAGTAAGCCTGAATGCG ATGTTCCCATTTCCTCGCACCTCACGGTGCTAACCTCCTTCTACTAGATT TAAACTAGTATTGCACCAGCTCCAAATCAGACCAACCGGCCAGGCTCGCG AGTGAGGTGAGCATGCTGTAGAAATTGGGAGTAAACAATCCTGACCAAAC CTCACCAGTGGCGTTCAAATAATCTGCACCCTTGAACATTTGCGGCACTC ACATTTCTTTAAGATCGTTCAGAATCCAAGTGTGTGCGCCATGTGCTTGG TGTGGGGAAGAAACGAATGAGCGAGGGAGCAACGATCCCAAACCCAGACG GGATCCGAGCGCCGATGTCAAGCACACGTGATTGTGTACGCACGACGTAG CTGTTGTCGTTATTCTCTTCATTAATCGTACACTCCACACATAGGTTCGC AACTTCGTGCTGGCGACGGAGCGGCTGTTCGGAGCGGCCCACAACATGAC GTTCCTCTTCGCGCCGCTATCGGGAGAGACGGCAAAACAGGTGAGCGAAG GAGTCAGCAGCCGACGATGGGTCATGTTTGTGTTTTTGCCCTCGGTGTCG ATTGAAGTTTGTTCACCGATCGTCGCCGATTTGTAGTCCAACGTCCTCGA GTGCTTGTCGCCTCGCGACCTTGACCTCTCCCTCGATCGAGCGAGGCGAG GGACAACACCGAACACCGACACGAACAGACATAAACCTAACTCTCGGCAA CGGATGGATTTTCCCAAAAATTTTGTCGTAGTGCGTGACCTATTATGATC ATGACTCCCTTAGCGCTCCCTGGGCCGACCTTCGTCCCCCTCCCCCCTCC CTCGTCCTCTTCTCCCTGGCCCAATCAGTCCCTTGCTACCACTTGCGTGC CGCGTCACTACTGCTGTGCCGCGATCCAAACCACCAATAGCGTCTCTTGT AGATAGACTCGTCAGACAACAACTCGAACGGACGCCGTCGAATCTTTCTC TCTTATACCGAGTGTCATTATCCTCTCCCGCGCTCTGACCCACGCCACTC CCGCTGTTCATTGGCATGTGCCAATGATCATTCAAGCATTCATGTAAATC AACGAGTTGAACGACCGCAGTTGAAACTGTCGCTGTGCTGGGTACCGATC TCCCCCCCCCTCCCTCTGATCCACGTGACCCCCCGCATTCCACTTTTCGT GCACCGCTCACGTGGCAATCATCGATACATACCCATGAATCGAACGCCTG CAGTTGAAGCTGTCGCTGTGTCGAGTGGCGGTCCAGGACGCCATGATCCG AGGGCTGACGGAGTACCTCGAGGCGCCCCTGAAGGCCGTGCTGGACTTTT GCGAGGTCATCGACGCGCTCGCGAAGCGACGGCAGCAGCTGTTGCTGGAC TACGACCACCATAAGCGAAAACACGAAGCGGTCGAGGTGAGTTTCCTTCT GCCTGGACTAGAGAGAGTCGCAGACGAAGTCGCGCAAACGTGGAGGGAAG GTCTGATGCAAGTGGAGGAGGCGAAGGGAAAGGAGGACGAGTTGAAACCA AAAGGAAAGCAGGCGAAGGGGAAACGGCGAGGACGCGAGGGCAACAGCTT AGGAAAGGACAGGAGGTAAAAGGGAGACAAGGGGCAAGAAAAGGACACCG GGAAAACAACAAGGTGGACCGTTGGAGGTCACCAGGGAAGAGGCGAGGAG GTGTGGTTGAAAAGGAACTACAAATTGAAATCGAAGTAGGACATTGAAGT CGGGGTTGAAGTTGAATGACGCGATGAAATTCAATGTAAAGCGATCCAGT AGCTGAAAAAGAGGCAATTCACTGCGTGCGCTGGCGGTGCTGTCTGTCTG ACCGTCTGTCGGCTGCGGTCGGTCGGTCTCAGGCGCGACGAGAAGCCGGT AAGGGGGACATGGACGAAGAGATCAAGGCGAGGTCGACCAAGCTCAACGT ATCCATCGACAACCTGAAGGACTGCACCGCACAGATCCTGGCGCAGGTGG CTGCGCTTGCAAAGGTAACTTACACGGGAGTGTGATAAACGGGCCTCATT TGCGTTTCATTTTTTGGGAGCTACTTGTGAAAAGGAGGTGTAGAATTGAC TTTTGCCTGCCCTTCAGTGTGGACTGATGTGATGACCGAAGTTCTATTCT GAATATTTTTCGCCACAAGTCACTGTTGCCTCATGGCTGGTGCATGATCT GAACGTGTTGGCTGGGGTCAATCAATGGCCGATGGATCATCTCAACGTGT TTGCCGAGGCCATCCTAGACGGGAAGAACATGTTTGCATGTTTTCCGGTG TTAACCTGGGTGGTAGGTGGATCATCTCGTTCCTGACCTATCCGACGTGT GCATGAGTGCACGCACAAATTGAAGGAAGCTGCGGAAGATACGATATCTC TGTCTTGGTATCTTGGTGATCAACCCACCTCCTAACGCACGCCTCCACGA GCGTATAGCTCAAATACGCCGTTTTGAATCATCGGACCACTCGCGTGGGG TGAGGAAATTGGGCAGGGGAGCCTCATCGAAGTGGGTGGGCCTCGGGGAT CTACAAATGCCAAAGTGCAAATGCCGGGATGTGTTGGACTACTTGCCGGC GGAAACGCAAAGACTAGATCGGCTGCGGACGATCGCCGTCAGTGTTGGTT GCGGCAGGTCCTCGCGAAGGCCCTCACAACAAGCGGTATCAGGGAGCCGA GCAGGGCATGGCGATAAGACAAGGGAAACATGTGTGCGGAGTTTGTGTTG GTATGTTTTTTGCAAAACTATCGAGCCCGCAAACGGCGTTTCGTCTTGAC GGGAGCAAAACTGGCGCTCCGTCTGGAAAGGAAGCCGTAGATGTACGGTC GATCATCGCACGGCCGCACAACTCAATAAACGAACGAGCGCCCCACCCCC CGTACCCCCTCCACCCTCCTCGTTGTTTGCACCCCCACGTACGTTGCGTT TCCTGTGTGGTTGTTCAAGGTGGAGCCTCAGCTGAAGGAGTCGCTATTCA AGGGGTTGGCGGCATGTCAAGTTTTTTATTGCCAGGTGAGTGCATGGTCG TCGTGATCACCGCTGTGTAGCTTGGCTGCGTGCCCCTTCCTCTGGTCTTG AGCACCGGTGCGATATCTTATATAGCAGTCCTTGGTTGTTTAGCCCCGTT CGGTCCACGGGTGGAAGGAGGAGGAGGGGGGGAGAGAGGAATGATGGTGA GGTTTGGAATTGATTGGGCGCGTGTGTATCTTGATAAGGGGCGGGAGTGT CGGGGGGAGGGAGGCACGACCGACGGTGAAGCCGGACCCACCGATTGCCG GTTAATTGGTGCTCGAGTCCAGATGTACGCATATGCCGGCGAGCAATTTG TCAGCGGGTATCTTCGGCGGCGAAATCCCCTCAGTAAATATTTTATAAAT CGGGCAGATTTCGTGTCACGCCCTCAGATTACCATGCAAATGAACGTGGG TCGCGCTCGGTGAGGTGTCCGTTAGTGTTTTTTGAGCCCCCCTTAACTCT GCAGAGTTTCGCGACATGCGAGACAGGTGTCCTCCGTCCCGTTCTACACA CGGCGTAGTCGTTCTTGGGTCCCCGCCCGCACGCCCCCCGTCTTCCGGCC AAAGTGCACTTGCATGCCTCCCCTCCCCTGTGTCCTTCCGGACCTCGTCA TGGCGTCGGTCGGGAATCCTCTGTTTCCTACCCTTTCCGCCGTGGGTACG CGCAGTCTGCCTGCGTCGTTGCTGTCTTAGGTTGCCGTGTTGCTGCTGCT GCGTCGTGCTTATCCTTTCCTGATTCACGCGATGGGCTTCCAACGTTTCT CCCTCGCTCGCATGGTGTCATCTTGGTTCTCCCTCCTGTTGACGTGGCGG TTCCCTCCGTTGTGACCGTTGCGGTCCACCCGCTCGTCGTCCTTCTTGCT GTCCTCCTGTGCTTTCCATCCTGATGCCTTCTGCTCCCTCCTCTCGCAGG CCTCGCTGTCGGCCTTTGAGACGGATTTCGTTCAAAGCCCCGACATGCAA GACTACGTGGCGAGCCTTCAGCGGGCGACGAGTGCGCTGGAGAAAAGCAT GCCGCTGCCGCCCTTAGGGGAGCACGTGGCTTATCTTGAGAACGCTCTCG TGAGTATTGTGCTCGTTTTCGGTAGTTTTCCTGCTGCCGCTGTTCGTGAA TCCCTTCTTTGGTTGAGTTTCCTAGCCCCATGTCGAAGTCGACGGTGAAG GTTTTTGAATGCCATGCTGCGGGTGCGTTGGCGCGTGTTCGGTTGCCAGG AAACGTTTCCCAAATACCTCTGCATGCTTGTGTTTATGGACCTGTTTTGT CTTTTTGACCTGTCTAATTTCTGTCTAATTCCTGTCAAATACTCGTCAAT TTCCTGCATAATTCCTGTCTAATGCCTCCCTAATTTCTGCCTGCTTCCTG CCTAATTCCTGTCGAATTCCTGTCGGTCTGGCTGCCCGCCCGCGTTCCTA TCTATCTCATGCTCGCAGGCTTCGGCGGCGGCAGAGGCGCGTGGGGAGGG CGAGGTCGGGGCGGTGTTTAAGCGACCGCTGTCTGACTTCGAAGAACCTC CGCCGGTGTTGATAGAGTGCATGGGGTGAGTCCTTGAGATAAGGCGAGAA GAGGAGGGAACGAAGCTTGTTTGGCAAACCCATCTGAGGTGTCACAGTTT TGTTTCATTGTTGTTGGGTAACTCCCGTCGGCTGGTGCTGGTGCCGGTTG AGCACGTTGGTGTTTATTGGGACCTTAGCGGTGGTGGTTTTGGTGATGGT AGCGCTACTTTGGCGGTATTTCTTGCTCGTTGTTGTGTCGATGTTAAAGT TATTTGTTTTCATTATTGCTGCTGCTGGTTGTTGTCGCTGCTGCTGCTGC TGCTGCTGCTGCTGCTGTTTTTGTTGTTGCTGCTGCTGCTTGTTGTTGTT GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTAGTTATTGTCGTCGTCGTCC TCGTCGTCGTTGTAGTTCGGATGGAGAAATATGCTGTGCGGGGCACATTT GCCGCACCCGGAACTCCCCCTCCAGCAGGCCCCCGCTCCCTAGCTTCGTC TGCCATCCATCCCCCGCGTCGCCCCTCATTCGACTTTTCACGCGATTCTT GTGTTACATTTGACGTGCTTAATGCCAACCGCGTCCACGCATCGCAACAT GTTTTTAGGTTTCTCGACGCTCACGGGCTGTACGTTCCGGGGCTGTTCCG GGTGGCGGGTAACACGGAGACGATCCGACAAATCAAGTCCAGATTCGATG ACGGGGAGAACGTGGAGTTCGACGAGCGGGTGAGAGCGCGCGGTTTCGTG TCCCAAAAGAAATAATAGGTGCCTTGTCCGTGTTGTGAGATTTCGTCGCA AATAGATCGTTGCTTCTTGTCCGTGTTCCCCCGAGAATTCGCTGGCTTCT CGTCCATGCTTGTGGGATTTTTTGGTCGCCTCCCCTCTTTCACGGCCGAA GCGCATGGTCTCCTGCCGCCTCAGCCTACCAGAGCAAAAATTGCGATGAA CAAGGTGCGGCGGCTGTGCTAAAATTGCCCCTTCGTGGAAGGTTTAGCGC CGACCGTAGGGAATCTGGAGCACGCACTAGCTCGCTCTTTCCACCTCCTG TTCGCGACATGAATTTGAGACCGTCACGCCGTCACCAAGTATCCCTTTAC TGACGTATCGGGAGTCCGATTGTTTCTTGCGGCTTGGAAAACTCCAAGTA AACGAGGCCGGTGCACCACGTTAACCGAAAAAATAGTCGAGAGGCCACGT TTTGCACCACGCACGCACCAGCGGCGTTCGCCGGGGCAGCGTGGGTGCAA AGTACCGCCGCTCTCCAACGAAATCCGTCGTCATCAGTGCTGTTGCGAGG AAGTAGGTGCTCAAGATGCCTGGTCGAGCAAGAGACCCCCGATTCGCCGA TTCTGGACCGAACACCGCACGGAATCCCCGATTCGCGTAGGCGGCAACGC TTTCCAGCCTGAGTCGAACTGAAAACCTTGCAGGCGTGTACGGCTTGGGC TTGGTGAGTGGTCAGGATCTCTTTTCCAATCGACCGTAAGGCATGGTTCA TCGTGAGCATCCCCCTCCCCTCTTGTTCGCTGTTGGGCTCCCCTGTGCCC CCCCTGCGATAAAACGAAACCGCCAAAAGATACACAATGTACACGAGGTA GCCACCTTGCTCAAGATGTACTTCCGCGAGCTGCCGGACCCGGTGGTGCC AACCACCCACTACCGCACGATGCTGGAGGCCTGCGCCAAGGTATGTGGAT GCAGACGTCAGACTGCAAACTGCTTCTCGGTGTGAGCAGACGCATGGGGG TGCTCGACCTTCTTCTATACGGCGGATCTCGTGTGTCTAGTCATGACTTG TGGCATGCCCGATGCCTGTCTTTTCCAGTCTTGAATCGCCTCGCACCGTG CGTATTGGGAAGCTCGCTCACCACGAAACTGTATCGATGGCCGCATTGGA ATGGAAAGTCGTCGGGATTCTGGAGCAGCGGCATCGAATACCGCTGTTCC TGTATAGCCCCTCCAACGCCTTCTGGCTCGACAATAACAGGTTGACGGTT TATCTAATAAACCTGAGGGGCACTGAACACACGATTCCCACGCCGCCCTT CCTCTGCGTGGTCTCCCCCTGTGAAGGTCAGACCACTCAGCCACCCTGCT AACGTGCAACCTCGTGCAGGCTTCGGGCGCTTTTGCAGTACTTGAACCTA CCCGCTCTCTGTCAAGCCGCCGCTTTTCTCGCCACTGGCAAAACCCTTGC ATCCGTAACCCGTCTTGGTCGATCTTCGAAATCATGGACGGCATCTCATG ACCAGGATCTCCCTCCCCAACCCCTCGCGCTCCCCCTTCTCTACCTCCCC GATCCTTGCTGCACCCCAAACACACACATGAACGAATAACAGCCGCAGCC AGAGTTCGTAGAAATGGCCAGGGGCTGCGTCGCCCAGTTCCCGAAAATCA ACTGCACGTGCCTACGGCTCCTGTTCGCGTTCCTGTACCGGGTGAGCCTC TGCTCTGCCGACAACAAGATGACCACGGAAAACCTCGGGATCGTCTTCGC GCCGAACCTGCTCAGAGCGCCGAATGCCACGGACATGAACGTGATGGACC TGCAGGTGAGCACGTGGGCGTCGGCGCGTGCAGTGAACCAC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig14:2139853..2147793-

>mRNA_P-fluviatile_contig14.2247.1 ID=mRNA_P-fluviatile_contig14.2247.1|Name=mRNA_P-fluviatile_contig14.2247.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2688bp|location=Sequence derived from alignment at P-fluviatile_contig14:2139853..2147793- (Porterinema fluviatile SAG_2381)
GTCGGGGAAAAGGCGATCCAAAAGATTGGTCTCGCGGTGCCTAGTAACGA
CGCCAACACCGGGGACATTGCTCAGCCGTGGAATAGCTTCTGTCACATGA
GGGACGGCCTCAGAGATATACAAGCACAGGTCGGGGAAAAGGCGATCCAA
AAGATTGGTCTCGCGGTGCCTAGTAACGACGCCAACACCGGGGACATTGC
TCAGCCGTGGAATAGCTTCTGTCACATGAGGGACGGCCTCAGAGATATAC
AAGCACAGGTTCGCAACTTCGTGCTGGCGACGGAGCGGCTGTTCGGAGCG
GCCCACAACATGACGTTCCTCTTCGCGCCGCTATCGGGAGAGACGGCAAA
ACAGGTTCGCAACTTCGTGCTGGCGACGGAGCGGCTGTTCGGAGCGGCCC
ACAACATGACGTTCCTCTTCGCGCCGCTATCGGGAGAGACGGCAAAACAG
TTGAAGCTGTCGCTGTGTCGAGTGGCGGTCCAGGACGCCATGATCCGAGG
GCTGACGGAGTACCTCGAGGCGCCCCTGAAGGCCGTGCTGGACTTTTGCG
AGGTCATCGACGCGCTCGCGAAGCGACGGCAGCAGCTGTTGCTGGACTAC
GACCACCATAAGCGAAAACACGAAGCGGTCGAGTTGAAGCTGTCGCTGTG
TCGAGTGGCGGTCCAGGACGCCATGATCCGAGGGCTGACGGAGTACCTCG
AGGCGCCCCTGAAGGCCGTGCTGGACTTTTGCGAGGTCATCGACGCGCTC
GCGAAGCGACGGCAGCAGCTGTTGCTGGACTACGACCACCATAAGCGAAA
ACACGAAGCGGTCGAGGCGCGACGAGAAGCCGGTAAGGGGGACATGGACG
AAGAGATCAAGGCGAGGTCGACCAAGCTCAACGTATCCATCGACAACCTG
AAGGACTGCACCGCACAGATCCTGGCGCAGGTGGCTGCGCTTGCAAAGGC
GCGACGAGAAGCCGGTAAGGGGGACATGGACGAAGAGATCAAGGCGAGGT
CGACCAAGCTCAACGTATCCATCGACAACCTGAAGGACTGCACCGCACAG
ATCCTGGCGCAGGTGGCTGCGCTTGCAAAGGTGGAGCCTCAGCTGAAGGA
GTCGCTATTCAAGGGGTTGGCGGCATGTCAAGTTTTTTATTGCCAGGTGG
AGCCTCAGCTGAAGGAGTCGCTATTCAAGGGGTTGGCGGCATGTCAAGTT
TTTTATTGCCAGGCCTCGCTGTCGGCCTTTGAGACGGATTTCGTTCAAAG
CCCCGACATGCAAGACTACGTGGCGAGCCTTCAGCGGGCGACGAGTGCGC
TGGAGAAAAGCATGCCGCTGCCGCCCTTAGGGGAGCACGTGGCTTATCTT
GAGAACGCTCTCGCCTCGCTGTCGGCCTTTGAGACGGATTTCGTTCAAAG
CCCCGACATGCAAGACTACGTGGCGAGCCTTCAGCGGGCGACGAGTGCGC
TGGAGAAAAGCATGCCGCTGCCGCCCTTAGGGGAGCACGTGGCTTATCTT
GAGAACGCTCTCGCTTCGGCGGCGGCAGAGGCGCGTGGGGAGGGCGAGGT
CGGGGCGGTGTTTAAGCGACCGCTGTCTGACTTCGAAGAACCTCCGCCGG
TGTTGATAGAGTGCATGGGGCTTCGGCGGCGGCAGAGGCGCGTGGGGAGG
GCGAGGTCGGGGCGGTGTTTAAGCGACCGCTGTCTGACTTCGAAGAACCT
CCGCCGGTGTTGATAGAGTGCATGGGGTTTCTCGACGCTCACGGGCTGTA
CGTTCCGGGGCTGTTCCGGGTGGCGGGTAACACGGAGACGATCCGACAAA
TCAAGTCCAGATTCGATGACGGGGAGAACGTGGAGTTCGACGAGCGGGTT
TCTCGACGCTCACGGGCTGTACGTTCCGGGGCTGTTCCGGGTGGCGGGTA
ACACGGAGACGATCCGACAAATCAAGTCCAGATTCGATGACGGGGAGAAC
GTGGAGTTCGACGAGCGGATACACAATGTACACGAGGTAGCCACCTTGCT
CAAGATGTACTTCCGCGAGCTGCCGGACCCGGTGGTGCCAACCACCCACT
ACCGCACGATGCTGGAGGCCTGCGCCAAGATACACAATGTACACGAGGTA
GCCACCTTGCTCAAGATGTACTTCCGCGAGCTGCCGGACCCGGTGGTGCC
AACCACCCACTACCGCACGATGCTGGAGGCCTGCGCCAAGCCGCAGCCAG
AGTTCGTAGAAATGGCCAGGGGCTGCGTCGCCCAGTTCCCGAAAATCAAC
TGCACGTGCCTACGGCTCCTGTTCGCGTTCCTGTACCGGGTGAGCCTCTG
CTCTGCCGACAACAAGATGACCACGGAAAACCTCGGGATCGTCTTCGCGC
CGAACCTGCTCAGAGCGCCGAATGCCACGGACATGAACGTGATGGACCTG
CAGGTGAGCACGTGGGCGTCGGCGCGTGCAGTGAACCACCCGCAGCCAGA
GTTCGTAGAAATGGCCAGGGGCTGCGTCGCCCAGTTCCCGAAAATCAACT
GCACGTGCCTACGGCTCCTGTTCGCGTTCCTGTACCGGGTGAGCCTCTGC
TCTGCCGACAACAAGATGACCACGGAAAACCTCGGGATCGTCTTCGCGCC
GAACCTGCTCAGAGCGCCGAATGCCACGGACATGAACGTGATGGACCTGC
AGGTGAGCACGTGGGCGTCGGCGCGTGCAGTGAACCAC
back to top