mRNA_P-fluviatile_contig14.2216.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2216.1 vs. uniprot
Match: D7FNQ5_ECTSI (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNQ5_ECTSI) HSP 1 Score: 319 bits (818), Expect = 6.360e-106 Identity = 159/170 (93.53%), Postives = 166/170 (97.65%), Query Frame = 1
Query: 25 RGYSSTSRREMNYLPMVLESTPRGERAYDIYSRLLRERIICLHGPVTEQVSSLVTAQLLFLESEDPEKPINMYINSPGGVVTAGLAIYDTMQYVRPDICTICMGQAASMGSLLLTAGSPEMRFILPNAKVMLHQPSGGANGMAADIQIMAEEIIKTRARLNDLYAEHTGR 534
R YSST R EMNYLPMVLESTPRGERAYDIYSRLLRERIIC+HGPVTEQ++SLVTAQLLFLESE+P+KPINMYINSPGGVVTAGLAIYDTMQYVRP+ICTICMGQAASMGSLLLTAGSPEMRFILPNAKVMLHQPSGGANGMAADI IMAEEIIKTRARLND+YAEHTGR
Sbjct: 30 RAYSSTRRVEMNYLPMVLESTPRGERAYDIYSRLLRERIICMHGPVTEQMTSLVTAQLLFLESENPDKPINMYINSPGGVVTAGLAIYDTMQYVRPEICTICMGQAASMGSLLLTAGSPEMRFILPNAKVMLHQPSGGANGMAADIAIMAEEIIKTRARLNDIYAEHTGR 199
BLAST of mRNA_P-fluviatile_contig14.2216.1 vs. uniprot
Match: A0A6U3X7K7_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3X7K7_9STRA) HSP 1 Score: 254 bits (649), Expect = 8.330e-81 Identity = 123/171 (71.93%), Postives = 147/171 (85.96%), Query Frame = 1
Query: 64 LPMVLESTPRGERAYDIYSRLLRERIICLHGPVTEQVSSLVTAQLLFLESEDPEKPINMYINSPGGVVTAGLAIYDTMQYVRPDICTICMGQAASMGSLLLTAGSPEMRFILPNAKVMLHQPSGGANGMAADIQIMAEEIIKTRARLNDLYAEHTGRVRERIPTKAD-DRW 573
+P+VLE T RGERAYDIYSRLLRERIICLHGPVTE ++SLVTAQLLFLESE P++P++MYINSPGG+V+AGLAIYDTMQY++P++ T+CMGQAASMGSLLL G+P R+ LPNAK+MLHQPSGGA GMA+DI I AEEI+KTRA LN+LY HTG+ +R+ D D W
Sbjct: 21 VPIVLEQTSRGERAYDIYSRLLRERIICLHGPVTEDMASLVTAQLLFLESELPDQPLSMYINSPGGLVSAGLAIYDTMQYIKPEVRTMCMGQAASMGSLLLAGGAPGHRYALPNAKIMLHQPSGGAQGMASDIAIQAEEILKTRATLNNLYVRHTGQPLDRVEKAMDRDTW 191
BLAST of mRNA_P-fluviatile_contig14.2216.1 vs. uniprot
Match: A0A835Z6X3_9STRA (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6X3_9STRA) HSP 1 Score: 253 bits (646), Expect = 4.450e-80 Identity = 128/180 (71.11%), Postives = 153/180 (85.00%), Query Frame = 1
Query: 64 LPMVLESTP-RGERAYDIYSRLLRERIICLHGPVTEQVSSLVTAQLLFLESEDPEKPINMYINSPGGVVTAGLAIYDTMQYVRPDICTICMGQAASMGSLLLTAGSPEMRFILPNAKVMLHQPSGGANGMAADIQIMAEEIIKTRARLNDLYAEHTGRVRERIPT--KADDRWKEQQRLA 594
+PMV+ESTP +GER +DIYSRLLRERI+ L GPV+E+++S+VTAQLLFLESEDPEKPI+MYINSPGG+VTAGLAIYDTMQYV P ICT+CMGQAASM SLLLTAG P MR+ILPNA+VMLHQPSGGA+GMAADI I+AEEI++TR+ LN+LY+ HTG+ I D + QQ +A
Sbjct: 31 VPMVVESTPGKGERGFDIYSRLLRERIVFLQGPVSEEMASVVTAQLLFLESEDPEKPISMYINSPGGLVTAGLAIYDTMQYVGPKICTVCMGQAASMASLLLTAGEPGMRYILPNARVMLHQPSGGAHGMAADIAIVAEEILRTRSVLNNLYSHHTGQPVSEIEKVMDRDTHYDAQQAIA 210
BLAST of mRNA_P-fluviatile_contig14.2216.1 vs. uniprot
Match: B8BVD6_THAPS (ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVD6_THAPS) HSP 1 Score: 240 bits (613), Expect = 1.170e-75 Identity = 117/167 (70.06%), Postives = 137/167 (82.04%), Query Frame = 1
Query: 64 LPMVLESTPRGERAYDIYSRLLRERIICLHGPVTEQVSSLVTAQLLFLESEDPEKPINMYINSPGGVVTAGLAIYDTMQYVRPDICTICMGQAASMGSLLLTAGSPEMRFILPNAKVMLHQPSGGANGMAADIQIMAEEIIKTRARLNDLYAEHTGRVRERIPTKAD 564
+P+VLES GERA+DIYSRLLRERIIC+HG VT+ ++SLVTAQLLFLE+E PEKP+ MYINSPGG+VTAG+A+YDTMQY+ P++ TICMGQAASMGSLLL GS RF LPNA++MLHQPSGGA GMA+DI I A EI++TRA LN LY HTGR E I D
Sbjct: 2 VPVVLESGTTGERAFDIYSRLLRERIICVHGEVTDSMASLVTAQLLFLEAEAPEKPVYMYINSPGGLVTAGMAMYDTMQYIHPEVHTICMGQAASMGSLLLAGGSAGCRFALPNARIMLHQPSGGAQGMASDIDIQAREILRTRANLNQLYVHHTGRELEEIERVMD 168
BLAST of mRNA_P-fluviatile_contig14.2216.1 vs. uniprot
Match: A0A200QNT2_9MAGN (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200QNT2_9MAGN) HSP 1 Score: 241 bits (614), Expect = 2.560e-75 Identity = 116/170 (68.24%), Postives = 142/170 (83.53%), Query Frame = 1
Query: 40 TSRREMNYLPMVLESTPRGERAYDIYSRLLRERIICLHGPVTEQVSSLVTAQLLFLESEDPEKPINMYINSPGGVVTAGLAIYDTMQYVRPDICTICMGQAASMGSLLLTAGSPEMRFILPNAKVMLHQPSGGANGMAADIQIMAEEIIKTRARLNDLYAEHTGRVRERI 549
T++R +PMV+E T RGERAYDI+SRLL+ERI+C+ GP+++ +S+V AQLLFLESE+P KPINMYINSPGGVVTAGLAIYDTMQY+R + T+C+GQAASMGSLLLTAG+ R LPNA+VM+HQPSGGA+G A DI+I AEEI+K R RLN LY EHTG+ E+I
Sbjct: 3 TTKRSYGLIPMVIEHTSRGERAYDIFSRLLKERIVCISGPISDDTASVVVAQLLFLESENPSKPINMYINSPGGVVTAGLAIYDTMQYIRSPVSTLCIGQAASMGSLLLTAGAKGKRRALPNARVMIHQPSGGASGQATDIKIQAEEILKVRQRLNLLYTEHTGQKIEKI 172
BLAST of mRNA_P-fluviatile_contig14.2216.1 vs. uniprot
Match: A0A6S9KWE2_HETAK (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KWE2_HETAK) HSP 1 Score: 241 bits (615), Expect = 3.360e-75 Identity = 115/160 (71.88%), Postives = 138/160 (86.25%), Query Frame = 1
Query: 58 NYLPMVLESTPRGERAYDIYSRLLRERIICLHGPVTEQVSSLVTAQLLFLESEDPEKPINMYINSPGGVVTAGLAIYDTMQYVRPDICTICMGQAASMGSLLLTAGSPEMRFILPNAKVMLHQPSGGANGMAADIQIMAEEIIKTRARLNDLYAEHTGRV 537
N +PMVLES+ RGERAYDIYSRLLRERII +HGP+TEQ++S+VTAQLLFLE+EDP+K + MYINSPGGVVTAG+AIYDTMQ+++ D+ TICMGQAASMGSLLL G+P R LPNA++MLHQPSGGA GMA+DI I AEEI++ R+ LN LY HTG+
Sbjct: 40 NLVPMVLESSNRGERAYDIYSRLLRERIIYVHGPITEQLASVVTAQLLFLEAEDPDKKLYMYINSPGGVVTAGMAIYDTMQFIQSDVATICMGQAASMGSLLLAGGAPGQRSALPNARIMLHQPSGGAQGMASDIAIQAEEILRIRSSLNQLYQHHTGQA 199
BLAST of mRNA_P-fluviatile_contig14.2216.1 vs. uniprot
Match: I1IZU5_BRADI (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1IZU5_BRADI) HSP 1 Score: 243 bits (619), Expect = 4.990e-75 Identity = 121/180 (67.22%), Postives = 148/180 (82.22%), Query Frame = 1
Query: 10 SSSSCRGYSSTSRREMNYLPMVLESTPRGERAYDIYSRLLRERIICLHGPVTEQVSSLVTAQLLFLESEDPEKPINMYINSPGGVVTAGLAIYDTMQYVRPDICTICMGQAASMGSLLLTAGSPEMRFILPNAKVMLHQPSGGANGMAADIQIMAEEIIKTRARLNDLYAEHTGRVRERI 549
SSS GY T+RRE +PMV+E T RGERAYDI+SRLL+ERI+C+HGP+ + +SLV AQLLFLESE+P KPI++YINSPGGVVTAGLAIYDTMQY+R + T+C+GQAASMGSLLL AG+P R LPNA+VM+HQPSGGA+G A+DI I A+EI+K R RLN +YA+HTG+ E I
Sbjct: 62 SSSPPAGY--TARREYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPAKPIHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIESI 239
BLAST of mRNA_P-fluviatile_contig14.2216.1 vs. uniprot
Match: A9P1N5_PICSI (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9P1N5_PICSI) HSP 1 Score: 241 bits (614), Expect = 5.410e-75 Identity = 116/168 (69.05%), Postives = 143/168 (85.12%), Query Frame = 1
Query: 46 RREMNYLPMVLESTPRGERAYDIYSRLLRERIICLHGPVTEQVSSLVTAQLLFLESEDPEKPINMYINSPGGVVTAGLAIYDTMQYVRPDICTICMGQAASMGSLLLTAGSPEMRFILPNAKVMLHQPSGGANGMAADIQIMAEEIIKTRARLNDLYAEHTGRVRERI 549
RR +PMV+E T RGERAYDI+SRLL+ERIIC++GP+ ++ +S+V AQLLFLESE+P+KPINMYINSPGGVVTAGLAIYDTMQY++ + T+C+GQAASMGSLLL AGS R LPNA+VM+HQPSGGA+G A+DI I A+EI+KTR RLN LYA+HTG+ E+I
Sbjct: 32 RRSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPIADETASVVVAQLLFLESENPQKPINMYINSPGGVVTAGLAIYDTMQYIKSPVTTLCIGQAASMGSLLLAAGSHGERRALPNARVMIHQPSGGASGQASDIAIHAKEILKTRERLNGLYAKHTGQTIEKI 199
BLAST of mRNA_P-fluviatile_contig14.2216.1 vs. uniprot
Match: A0A1D5UFU5_WHEAT (ATP-dependent Clp protease proteolytic subunit n=7 Tax=Triticinae TaxID=1648030 RepID=A0A1D5UFU5_WHEAT) HSP 1 Score: 242 bits (617), Expect = 9.980e-75 Identity = 115/168 (68.45%), Postives = 142/168 (84.52%), Query Frame = 1
Query: 46 RREMNYLPMVLESTPRGERAYDIYSRLLRERIICLHGPVTEQVSSLVTAQLLFLESEDPEKPINMYINSPGGVVTAGLAIYDTMQYVRPDICTICMGQAASMGSLLLTAGSPEMRFILPNAKVMLHQPSGGANGMAADIQIMAEEIIKTRARLNDLYAEHTGRVRERI 549
RRE +PMV+E T RGERAYDI+SRLL+ERI+C+HGP+ + +SLV AQLLFLESE+P KPI++YINSPGGVVTAGLAIYDTMQY+R + T+C+GQAASMGSLLL AG+P R LPNA+VM+HQPSGGA+G A+DI I A+EI+K R RLN +YA+HTG+ +RI
Sbjct: 74 RREYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPAKPIHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGASGQASDIAIQAKEILKVRDRLNKIYAKHTGQAIDRI 241
BLAST of mRNA_P-fluviatile_contig14.2216.1 vs. uniprot
Match: B5Y5T1_PHATC (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y5T1_PHATC) HSP 1 Score: 239 bits (609), Expect = 1.360e-74 Identity = 115/167 (68.86%), Postives = 138/167 (82.63%), Query Frame = 1
Query: 64 LPMVLESTPRGERAYDIYSRLLRERIICLHGPVTEQVSSLVTAQLLFLESEDPEKPINMYINSPGGVVTAGLAIYDTMQYVRPDICTICMGQAASMGSLLLTAGSPEMRFILPNAKVMLHQPSGGANGMAADIQIMAEEIIKTRARLNDLYAEHTGRVRERIPTKAD 564
+P+VLES GER++DIYSRLLRERIIC+HG V++ ++SLVTAQLLFLE+E PEKP+ MYINSPGG+VTAG+A+YDTMQY+RPD+ TICMGQAASMGSLLL G+P RF LPN+++MLHQPSGGA GMAADI I A EI++TRA LN LY HTG+ I D
Sbjct: 19 VPIVLESGALGERSFDIYSRLLRERIICVHGEVSDHMASLVTAQLLFLEAEHPEKPVYMYINSPGGLVTAGMAMYDTMQYIRPDVHTICMGQAASMGSLLLAGGTPGCRFALPNSRIMLHQPSGGAQGMAADIDIQAREILRTRANLNRLYVHHTGQELSEIERVMD 185 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2216.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2216.1 >prot_P-fluviatile_contig14.2216.1 ID=prot_P-fluviatile_contig14.2216.1|Name=mRNA_P-fluviatile_contig14.2216.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=225bp MNYLPMVLESTPRGERAYDIYSRLLRERIICLHGPVTEQVSSLVTAQLLFback to top mRNA from alignment at P-fluviatile_contig14:1847016..1849824+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2216.1 ID=mRNA_P-fluviatile_contig14.2216.1|Name=mRNA_P-fluviatile_contig14.2216.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2809bp|location=Sequence derived from alignment at P-fluviatile_contig14:1847016..1849824+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:1847016..1849824+ >mRNA_P-fluviatile_contig14.2216.1 ID=mRNA_P-fluviatile_contig14.2216.1|Name=mRNA_P-fluviatile_contig14.2216.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1350bp|location=Sequence derived from alignment at P-fluviatile_contig14:1847016..1849824+ (Porterinema fluviatile SAG_2381)back to top |