mRNA_P-fluviatile_contig14.2206.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.2206.1
Unique NamemRNA_P-fluviatile_contig14.2206.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig14.2206.1 vs. uniprot
Match: A0A6H5L6A2_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A2_9PHAE)

HSP 1 Score: 485 bits (1249), Expect = 1.120e-162
Identity = 251/418 (60.05%), Postives = 295/418 (70.57%), Query Frame = 1 
Query:    1 RNRRRPFHLPFFPTVALLLVAGGSLLGSSGAVSSTTLNDPLVSLDTATLTSNMRHWTKDYAVMFYAPWCKHCKEDFLPLWEGVSKQLAHKDPKGKRKLVMGKFNCEQDTAAAQFCQDVRLEYYPTFMFFGAGKFHDHDPLSGAILGPRPTEHESTAKFPSGAMVYHEVMADWAETMHLISSSNRVMEKINIFRWGRGRGKEKASEQEQLIAEIEALERKAQHLEQTMARAGGAEAAVQEASSLPYGYGDPYRELMEVGYDPEFEPVMQCVIDMAGQYCEAEGIKELDPWCSILDSCVATDFQGAECWPSSCPLLDEGCQITSFCLAPELVELYIDLHTKHLEDNKGLAGGEARELGIRPEGGLAEAAEQSGEQPAVQSGEAAT---LPPFFGR---RHGAGAGGVDRTGDERGETVAA 1236
            R RRR F  P     ALLLV+G SLLGS    +ST+L +PL  LDTATLTSNMRHWT DYAVMFYAPWC+HCKE F+PLWE VS Q+A +DP+GKRKLV+GKFNCEQDT AA FCQ++ L++YPTFMFFGAGKFHDHDPLSG +LGPRPTEH+S+AKFP+GA+VYHEV+A W +TMH IS  NRVME++N+F   RG  K++A+ +E+L+AEIEALERK   L+Q M    G EA   + SSLPYG+GDPY EL +V YD EFEPVM CVIDMA QYC+ EG+KE DPWC  L+SC+AT+F G ECWPSSCP  + GCQITSFCL PE+ + Y+ L  +H     G A     E G     G AE                A    LPPFFGR     G G  GVDR  DERG    A
Sbjct:    8 RYRRRVFPAPSVAVTALLLVSG-SLLGSCPTSASTSLAEPLAPLDTATLTSNMRHWTTDYAVMFYAPWCQHCKELFMPLWEDVSMQMAEEDPRGKRKLVLGKFNCEQDTTAAAFCQEINLQFYPTFMFFGAGKFHDHDPLSGMVLGPRPTEHDSSAKFPAGAVVYHEVLAGWTKTMHFISGYNRVMERLNVF-GSRGGRKDRAASEERLLAEIEALERKNHQLQQAMT---GGEA---QESSLPYGHGDPYNELWKVAYDAEFEPVMSCVIDMAMQYCDVEGVKESDPWCRTLESCIATEFVGDECWPSSCPFQEGGCQITSFCLTPEVFDAYMQLIDEH-----GAAAAAEEEAGEGVGAGWAEXXXXXXXXXXXXXXXXAAAPGLPPFFGRPAGSQGGGGVGVDRKSDERGGEAVA 412
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BLAST of mRNA_P-fluviatile_contig14.2206.1 vs. uniprot
Match: D7FNN2_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNN2_ECTSI)

HSP 1 Score: 337 bits (865), Expect = 1.720e-107
Identity = 170/257 (66.15%), Postives = 204/257 (79.38%), Query Frame = 1 
Query:    1 RNRRRPFHLPFFPTVALLLVAGGSLLGSSGAVSSTTLNDPLVSLDTATLTSNMRHWTKDYAVMFYAPWCKHCKEDFLPLWEGVSKQLAHKDPKGKRKLVMGKFNCEQDTAAAQFCQDVRLEYYPTFMFFGAGKFHDHDPLSGAILGPRPTEHESTAKFPSGAMVYHEVMADWAETMHLISSSNRVMEKINIFRWGRGRGKEKASEQEQLIAEIEALERKAQHLEQTMARAGGAEAAVQEASSLPYGYGDPYRELMEV 771
            R RRR    P     ALLLV+G SLLGS    +ST+L +PL  LDTATLTSNMRHWT DYAVMFYAPWC+HCKE F+PLWE VS Q+A +DP+GKRKLV+ KFNCEQDT AA FCQ++ L++YPTFMFFGAGKFHDHDPLSG +LGPRPTEH+S+AKFP+GA+VYHEV+A W +TMH IS  NRVME++N+F  GRG  K++A+ +E+L+AEIEALERK   L+Q M   GG     QE SSLPYG+GDPY EL ++
Sbjct:    8 RYRRRLSPAPSAAVTALLLVSG-SLLGSCPTSASTSLAEPLAPLDTATLTSNMRHWTTDYAVMFYAPWCQHCKELFMPLWEDVSMQMAEEDPRGKRKLVLAKFNCEQDTTAAAFCQEINLQFYPTFMFFGAGKFHDHDPLSGMVLGPRPTEHDSSAKFPAGAVVYHEVLAGWTKTMHFISGYNRVMERLNVF-GGRGGRKDRAASEERLLAEIEALERKNHQLQQAMT--GG---ETQE-SSLPYGHGDPYNELWKM 256
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BLAST of mRNA_P-fluviatile_contig14.2206.1 vs. uniprot
Match: A0A7S2XXY5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXY5_9STRA)

HSP 1 Score: 139 bits (351), Expect = 3.610e-32
Identity = 97/358 (27.09%), Postives = 155/358 (43.30%), Query Frame = 1 
Query:  115 DPLVS-LDTATLTSNMRHWTKDYAVMFYAPWCKHCKEDFLPLWEGVSKQLAHKDPKGKRKLVMGKFNCEQDTAAAQFCQDVRLEYYPTFMFFGAGKFHDHDPLSGAILGPRPTEHESTAKFPSGAMVYHEVMADWAETMHLISSSNRVMEKINIF-------RWGRGRG--KEKASEQEQLIAEIEALERKAQHL-------------------------------EQTMARAGGAEAAVQ------------------EASSLPYGYG---DPYRELMEVGYDPEFEPVMQCVIDMAGQYCEAEGIKELDPWCSILDSCVATDFQGAECWPSSCPLLD-EGCQITSFCLAPELVELY 999
            DPLV  L    +  N+  W  DY VMFYAPWC HC++   PL+E +SK++   D      + +GKFNCE      QFC  + ++ YP  MFFG G F   + L  A+   +P   ++ +      +++ E + DWA+T   +S  +R  + +          +W +      E  + +E+L AE+ AL++  Q                                 + T  +A GA   +Q                  E +++   Y    DP+  L E GY  E   +  CV DMA  YCE       +P+C  +  CV   F+  +C P +CP +D  GC+++  C   ++++ Y
Sbjct:   25 DPLVQQLSANDIVDNIEVWNSDYMVMFYAPWCPHCRQ-LSPLYEEISKEITKPD------MQLGKFNCEGSQTNLQFCNALNVDRYPMIMFFGYGSFPQGNLLKQALTKTQPALPQAIS---FDGLLFPEAIKDWAKTCRAVSRFHRFKDNVKALFSFNKLGQWQQAAALTNEALAAKEELQAELAALQQDHQLXXXXXXXXXXXXXXXGANAVPAAGSASSSWFGDLTTPQADGASPDLQQNNQQAIEEYVQQLLDNAEGAAIAEEYATAEDPFVVLKEAGYPDEMIALRSCVADMAATYCETVVDPSSEPFCESISLCVMEGFESDQCRPPTCPFVDPRGCELSKVCFQQDVLDEY 372
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BLAST of mRNA_P-fluviatile_contig14.2206.1 vs. uniprot
Match: A0A7S2CKY2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CKY2_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.520e-25
Identity = 93/349 (26.65%), Postives = 162/349 (46.42%), Query Frame = 1 
Query:   43 VALLLVAGGSLLGSSGAVSSTTLNDPLVSLDTATLTSNMRHWTKDYAVMFYAPWCKHCKEDFLPLWEGVSKQLAHKDPKGKRKLVMGKFNCEQDTAAAQFCQDVRLEYYPTFMFFGAGKFHDHDPLSGAILGPRPTEHESTAKFPSGAMVYHEVMADWAETMHLISSSNRVMEKINIFRWGRGRGKEKASEQEQLIAEIEALERKAQHLEQTMARAGGAEAAVQEASSLPYGYGDPYRELM----------------EVGYDPEFE-------PVMQCVIDMAGQYCEAEGIKELDP-----WCSILDSCVATDFQGAECWPSSCPLLDEGCQITSFCLAPELVELYID 1005
            +ALL +A    + S    S    + P  ++    L  ++  W +DYAV+F++ +C +C++ F P+W  +S+  A     G + L +  F+CE  T   + C    ++ YP+ MF G G F  +DP+S    G   +  E T  +     +Y   + DW   M  IS+ +R          GR    + ASE ++L  E  AL ++ + +  T +      +A ++ +         ++EL+                E G++            + QCV ++A ++C A  +K  D      +C IL  C A DF+ A C P +CPL ++GC++TS C+ P++V+ Y+D
Sbjct:   14 LALLQLAPLPFVSSKAVGSQRDYSLPPRTIQADELRESIEEWDRDYAVLFHSKYCVYCRQ-FKPIWHQISRLYA-----GTKNLDVVSFDCEATTENKKLCIYAGVQQYPSVMFVGHGSFMQNDPISSLFRGVSLSP-EKTIMYQGE--LYLAAVRDWTRAMRFISTLSRWHSTFMAI-IGREPSNQ-ASELKRLRRE-NALLKEGKKITDTASPYSSTSSAAEQTAGDTSMSPTQHQELIKKYKTKEDSFAVLGTGEYGHNETTSNSNSLLLAIRQCVAEVAWEHCAAR-VKAGDATGGSAYCGILQECYADDFKTAACRPDTCPLDEQGCELTSICMNPDIVKRYLD 349
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BLAST of mRNA_P-fluviatile_contig14.2206.1 vs. uniprot
Match: A0A835YNV7_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNV7_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.360e-24
Identity = 100/374 (26.74%), Postives = 146/374 (39.04%), Query Frame = 1 
Query:   46 ALLLVAGGSLLGSSGAVSSTTLNDP---LVSLDTATLTSNMRHWTKDYAVMFYAPWCKHCKEDFLPLWEGVSKQLAHKDPKGKRKLVMGKFNCEQ--DTAAAQFCQDVRLEYYPTFMFFGAGKFHDHDPLSG-AILGPRPTEHESTAKFPSGAMVYHEVMADWAETMHLISSSNRVMEKINIFRWGRGRGKEKASEQEQLIAEIEALERKAQHLEQTMARAGGAEAAVQEASSLPYG------------------------------------------YGDPYRE-----LMEVGYDPEFEPVMQCVIDMAGQYCEA---EGIKELDPWCSILDSCVATDFQGAECWPSSCPLLDEGCQITSFCLAPELVELY 999
            A L  A    LG++ A +     DP   LV L    L SN+  W +D AVMFYAPWC HCK+ FLP W  ++  +           ++G+F+CE       AQFC D+ +  YPTF  FG G F D   L+  A    R T ++   +F    + Y+  + DW   M  +S+  R   ++ +   G     + A + ++L A+   L    + L                                                                 Y D  RE     L   GY  +   ++ CV D A +YC+A    G    + WC+ LD+C+   F+GA C P+ CP  D GC   + C   +L   Y
Sbjct:    5 AHLATATLGCLGAACAAAVYKAVDPARSLVELTAEDLQSNLEFWRQDIAVMFYAPWCPHCKK-FLPTWALIADDVKALYGTDDAAHLVGRFDCESLAHPDNAQFCSDIGIRSYPTFKVFGFGDFRDRSALASLAWWRRRDTTYDGVVEFRG--LRYYAALRDWVRAMFGVSALQRAQARV-LGLLGLSSALDPAPQLQRLAADNRVLRGAVRQLAAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFAADRYDDTLREDLFAVLAAGGYGDD--ALLACVADRAAEYCDALEDAGQLSTEAWCATLDACLDAGFEGAACRPAVCPFADVGCTHVAQCARDDLRREY 372
[Close]
BLAST of mRNA_P-fluviatile_contig14.2206.1 vs. uniprot
Match: D7FNN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNN1_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 1.490e-24
Identity = 70/184 (38.04%), Postives = 92/184 (50.00%), Query Frame = 1 
Query:  799 MQCVIDMAGQYCEAEGIKELDPWCSILDSCVATDFQGAECWPSSCPLLDEGCQITSFCLAPELVE----LYIDLHTKHLEDNKGLAGGEARELGIRPEGGLAEAAEQSGE-------QPAVQSGEAAT------------------------LPPFFGRRHGA---GAGGVDRTGDERGETVAA 1236
            M CVIDMA QYC+ EG+KE DPWCS L+SC+AT+F G ECWPSSCP  + GCQITSFCL PE+ +    + +++        +     +A  + +  E   A  AE++GE       +   ++G A                          LPPFFGR  G+       VDR  DERG    A
Sbjct:    1 MSCVIDMAMQYCDVEGVKESDPWCSTLESCIATEFVGDECWPSSCPFQEGGCQITSFCLTPEMFDANERVLVEVAPGANPSGQTTTAQQAY-MQLTDEHDTAATAEEAGEGGGAGWAEAGAETGTAXXXXXXXXXXXXXXXXXXXXXXXXXGLPPFFGRPAGSQXXXXXXVDRKSDERGGEAVA 183
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BLAST of mRNA_P-fluviatile_contig14.2206.1 vs. uniprot
Match: A0A6J3LTB7_9PEZI (protein disulfide isomerase n=1 Tax=Dissoconium aciculare CBS 342.82 TaxID=1314786 RepID=A0A6J3LTB7_9PEZI)

HSP 1 Score: 74.3 bits (181), Expect = 5.410e-10
Identity = 44/129 (34.11%), Postives = 72/129 (55.81%), Query Frame = 1 
Query:   49 LLLVAGGSLLGSSGAVSSTTLNDPL---VSLDTATLTSNMRHWTKDYAVMFYAPWCKHCKEDFLPLWEGVSKQLAHKDPKGKRKLVMGKFNCEQDTAAAQFCQDVRLEYYPTFMFFGAGKFHDHDPLSG 426
            +L  A  SL+GS   VS++T  +PL   V L   T    +      + V FYAPWC HC +D  P W+G+++++       +R+L +G+ NCE      + C+D++++ YPT +FF  G+  ++D L G
Sbjct:  215 VLSTAKSSLVGSRVGVSTSTKPNPLGKSVELTPGTFQELVTDTRDPWFVKFYAPWCHHC-QDLAPNWQGMARKM-------ERQLNIGEVNCELHK---KLCKDLKVQGYPTILFFREGERVEYDGLRG 332
[Close]
BLAST of mRNA_P-fluviatile_contig14.2206.1 vs. uniprot
Match: A0A167QYB3_9PEZI (Disulfide isomerase n=1 Tax=Sporothrix insectorum RCEF 264 TaxID=1081102 RepID=A0A167QYB3_9PEZI)

HSP 1 Score: 67.0 bits (162), Expect = 1.060e-7
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 1 
Query:  184 VMFYAPWCKHCKEDFLPLWEGVSKQLAHKDPKGKRKLVMGKFNCEQDTAAAQFCQDVRLEYYPTFMFFGAGKFHDHDPLSG 426
            + FYAPWC HCK      WE ++K++       + +L +G+ NCE++T   + C+DVRL+ YPT +FF  G+  ++D L G
Sbjct:  313 IKFYAPWCHHCKA-MAASWEQLAKEM-------QGRLNVGEVNCEKET---RLCKDVRLQGYPTILFFRGGERVEYDGLRG 382
[Close]
BLAST of mRNA_P-fluviatile_contig14.2206.1 vs. uniprot
Match: A0A2C5XD58_9PEZI (Thioredoxin domain-containing protein n=2 Tax=Ceratocystis TaxID=5157 RepID=A0A2C5XD58_9PEZI)

HSP 1 Score: 65.5 bits (158), Expect = 3.120e-7
Identity = 33/101 (32.67%), Postives = 56/101 (55.45%), Query Frame = 1 
Query:  124 VSLDTATLTSNMRHWTKDYAVMFYAPWCKHCKEDFLPLWEGVSKQLAHKDPKGKRKLVMGKFNCEQDTAAAQFCQDVRLEYYPTFMFFGAGKFHDHDPLSG 426
            VSLD  +  + +    + + + FYAPWC HC+    P W  ++K +       K +L +G+ NCE+++     C D++L+ YPT +FF  G+  ++D L G
Sbjct:  259 VSLDAMSFANQVVATREPWFIKFYAPWCHHCQA-MAPNWMQLAKNM-------KDRLNVGEVNCEKES---HLCSDIKLDGYPTMLFFQGGQRVEYDGLRG 348
[Close]
BLAST of mRNA_P-fluviatile_contig14.2206.1 vs. uniprot
Match: A0A136IME0_9PEZI (Thioredoxin n=1 Tax=Microdochium bolleyi TaxID=196109 RepID=A0A136IME0_9PEZI)

HSP 1 Score: 63.9 bits (154), Expect = 9.260e-7
Identity = 35/101 (34.65%), Postives = 56/101 (55.45%), Query Frame = 1 
Query:  124 VSLDTATLTSNMRHWTKDYAVMFYAPWCKHCKEDFLPLWEGVSKQLAHKDPKGKRKLVMGKFNCEQDTAAAQFCQDVRLEYYPTFMFFGAGKFHDHDPLSG 426
            VSL   +  S +    + + + FYAPWC HC+      W+ ++K++       K KL +G+ NCE   A ++ C+DVR+  YPT +FF  G+  D++ L G
Sbjct:  256 VSLSAESFQSLVTMTQEPWFIKFYAPWCHHCQA-MASNWQQLAKEM-------KGKLNVGEVNCE---AESRLCKDVRVNGYPTILFFRGGERVDYNGLRG 345
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2206.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5L6A2_9PHAE1.120e-16260.05Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
D7FNN2_ECTSI1.720e-10766.15Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A7S2XXY5_9STRA3.610e-3227.09Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2CKY2_9STRA2.520e-2526.65Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835YNV7_9STRA1.360e-2426.74Thioredoxin domain-containing protein n=1 Tax=Trib... [more]
D7FNN1_ECTSI1.490e-2438.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6J3LTB7_9PEZI5.410e-1034.11protein disulfide isomerase n=1 Tax=Dissoconium ac... [more]
A0A167QYB3_9PEZI1.060e-739.51Disulfide isomerase n=1 Tax=Sporothrix insectorum ... [more]
A0A2C5XD58_9PEZI3.120e-732.67Thioredoxin domain-containing protein n=2 Tax=Cera... [more]
A0A136IME0_9PEZI9.260e-734.65Thioredoxin n=1 Tax=Microdochium bolleyi TaxID=196... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:1788868..1795051 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score91.3
Seed ortholog evalue1e-15
Seed eggNOG ortholog159749.K0RDP0
EggNOG free text desc.Thioredoxin
EggNOG OGs2E5JJ@1,2SCCT@2759,2XCA9@2836
COG Functional cat.O
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-01_004880.1
Exons8
Model size2279
Cds size1083
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2206.1prot_P-fluviatile_contig14.2206.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 1789908..1794895 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815619.3343446-UTR-P-fluviatile_contig14:1788867..17899071622815619.3343446-UTR-P-fluviatile_contig14:1788867..1789907Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1788868..1789907 -
1693562472.240491-UTR-P-fluviatile_contig14:1788867..17899071693562472.240491-UTR-P-fluviatile_contig14:1788867..1789907Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1788868..1789907 -
1622815619.4381096-UTR-P-fluviatile_contig14:1794895..17950511622815619.4381096-UTR-P-fluviatile_contig14:1794895..1795051Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1794896..1795051 -
1693562472.3237422-UTR-P-fluviatile_contig14:1794895..17950511693562472.3237422-UTR-P-fluviatile_contig14:1794895..1795051Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 1794896..1795051 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815619.3453717-CDS-P-fluviatile_contig14:1789907..17901531622815619.3453717-CDS-P-fluviatile_contig14:1789907..1790153Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1789908..1790153 -
1693562472.2523336-CDS-P-fluviatile_contig14:1789907..17901531693562472.2523336-CDS-P-fluviatile_contig14:1789907..1790153Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1789908..1790153 -
1622815619.3576677-CDS-P-fluviatile_contig14:1790654..17907651622815619.3576677-CDS-P-fluviatile_contig14:1790654..1790765Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1790655..1790765 -
1693562472.2675068-CDS-P-fluviatile_contig14:1790654..17907651693562472.2675068-CDS-P-fluviatile_contig14:1790654..1790765Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1790655..1790765 -
1622815619.368029-CDS-P-fluviatile_contig14:1791067..17911811622815619.368029-CDS-P-fluviatile_contig14:1791067..1791181Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1791068..1791181 -
1693562472.2756238-CDS-P-fluviatile_contig14:1791067..17911811693562472.2756238-CDS-P-fluviatile_contig14:1791067..1791181Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1791068..1791181 -
1622815619.377923-CDS-P-fluviatile_contig14:1792051..17921621622815619.377923-CDS-P-fluviatile_contig14:1792051..1792162Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1792052..1792162 -
1693562472.283795-CDS-P-fluviatile_contig14:1792051..17921621693562472.283795-CDS-P-fluviatile_contig14:1792051..1792162Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1792052..1792162 -
1622815619.3874655-CDS-P-fluviatile_contig14:1792650..17928361622815619.3874655-CDS-P-fluviatile_contig14:1792650..1792836Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1792651..1792836 -
1693562472.2918518-CDS-P-fluviatile_contig14:1792650..17928361693562472.2918518-CDS-P-fluviatile_contig14:1792650..1792836Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1792651..1792836 -
1622815619.397213-CDS-P-fluviatile_contig14:1793309..17934591622815619.397213-CDS-P-fluviatile_contig14:1793309..1793459Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1793310..1793459 -
1693562472.2995477-CDS-P-fluviatile_contig14:1793309..17934591693562472.2995477-CDS-P-fluviatile_contig14:1793309..1793459Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1793310..1793459 -
1622815619.4155345-CDS-P-fluviatile_contig14:1793879..17939821622815619.4155345-CDS-P-fluviatile_contig14:1793879..1793982Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1793880..1793982 -
1693562472.307592-CDS-P-fluviatile_contig14:1793879..17939821693562472.307592-CDS-P-fluviatile_contig14:1793879..1793982Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1793880..1793982 -
1622815619.426701-CDS-P-fluviatile_contig14:1794833..17948951622815619.426701-CDS-P-fluviatile_contig14:1794833..1794895Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1794834..1794895 -
1693562472.3156805-CDS-P-fluviatile_contig14:1794833..17948951693562472.3156805-CDS-P-fluviatile_contig14:1794833..1794895Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1794834..1794895 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.2206.1

>prot_P-fluviatile_contig14.2206.1 ID=prot_P-fluviatile_contig14.2206.1|Name=mRNA_P-fluviatile_contig14.2206.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=361bp
MRHWTKDYAVMFYAPWCKHCKEDFLPLWEGVSKQLAHKDPKGKRKLVMGK
FNCEQDTAAAQFCQDVRLEYYPTFMFFGAGKFHDHDPLSGAILGPRPTEH
ESTAKFPSGAMVYHEVMADWAETMHLISSSNRVMEKINIFRWGRGRGKEK
ASEQEQLIAEIEALERKAQHLEQTMARAGGAEAAVQEASSLPYGYGDPYR
ELMEVGYDPEFEPVMQCVIDMAGQYCEAEGIKELDPWCSILDSCVATDFQ
GAECWPSSCPLLDEGCQITSFCLAPELVELYIDLHTKHLEDNKGLAGGEA
RELGIRPEGGLAEAAEQSGEQPAVQSGEAATLPPFFGRRHGAGAGGVDRT
GDERGETVAA*
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mRNA from alignment at P-fluviatile_contig14:1788868..1795051-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.2206.1 ID=mRNA_P-fluviatile_contig14.2206.1|Name=mRNA_P-fluviatile_contig14.2206.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6184bp|location=Sequence derived from alignment at P-fluviatile_contig14:1788868..1795051- (Porterinema fluviatile SAG_2381)
AGAAATCGGAGACGACCCTTTCATCTACCTTTTTTCCCGACGGTGGCGCT
ATTGCTCGTGGCAGGGGGGAGCTTGCTTGGTTCCTCGGGGGCGGTGTCAT
CAACCACCCTCAACGATCCCCTCGTCTCGCTCGATACGGCAACGTTGACG
AGCAACATGCGTCATTGGACCAAGGATTACGCGGTCATGTTCTACGCTCC
TTGGTGCAAACACTGCAAGTACGTGCTTATCGTCTCGACCGCTGTGTCTT
CGAATGAGATGTTGGTTTGTCATTCTCAGTGGCTTATCTGCGATCTGATT
CAACATGTCTGTATCGAGCATGCGCTGCCAGTCTCGTTCCTGCTGCAGTA
TTCAGGACCGATCCCCGACGAATCTCTTCGCATGTTGTTCAATGTACCAT
CGACCAGCCATTTCCCCCCCATGCAGAATGCACCCATCAGTAATTGAACG
CCGTGGAGATCATAGTTTTATAACGGCGAAAAAGCTTATCCCCCACGGCA
TGTTACACGTGTCATCGCACTCCACCACAGCGGACTGACGCGAGTGGCTG
TCGGACCCATGAGGGCATTCTCTCCGCAATTTCGAACCACAAACTATTCG
TGTCCGAAGACCGGAAGATAGAAATTTAGCCGCCAGGAACCTCGTTGGGG
CACATTCAGGATGGTTGGAACGGTGTTGGCACACAGCAGCGGCCACTTCC
TCTTGGTGATTGTAAGGTGTATGTAGACGTTGCCGTTGCTTGCGACGAAA
CCGGCATGATCAACATTCAGGACGATACGGCCAAGACCGCAGGCGGCGTA
CAGCAAGGCCAGAGAGTTGAACAAGAGAAGGGCTTCCCCGGCTTGGCATG
ATGGCTTCAACACGAGACGACAAAGTCCGCCGATGTTCGCGGTTTCGCGC
GCCCCCCCATTTCTCTTCACAGAGCGAAATGTTTTCATCGAGATCCTCGG
AGGGCCGCAGCCGTCGCAAGGTTGGGTACACGGCGAGTGTACCACAACAC
AGAGTGCTTGTGCAAACACCATGTTCGCCTTGTTCTGCGTGGCTATGTTC
CTCTCGTTTTTCGTCACAGGGAGGACTTCTTACCTCTCTGGGAAGGTGTG
TCGAAGCAGCTGGCGCACAAGGACCCCAAAGGGAAGCGAAAGCTGGTGAT
GGGCAAATTCAACTGCGAGCAGGTTTGTCCATGATACCGAGAGCGGTGAT
GTTGTCGTAGACCTTTCGACACAACCTTGTTATGCAGCAGTACCAGCCAC
CTACTCTTGGGGAGAAATTTGAGCGTGTCGAAGTGCAGTGGCTTTTTTGT
GTGCAAGCTTCGTGGTTTCTGCCTCAGAGGAGAGTTTTCGCCCCGCCTCC
CGTGTTTGCCAGTTCCGTCACCCTCGGCGCAATTGTTGTCGGACTTTGCT
GGTGGCATCGTTTGCCGCGCAGCCCCTCACGTACAACGCGTCAGCGACAG
AAGTGCGCTTTAACGGAATTTGTGCGCTTTGACAATATCTCCGAGTCGCT
GCTTGTAATCTCCTGCAAATATCTTCGATTGCCATTTTCTGGCGTCCTGC
CCCTTCACCAACGCTCGTTCCCCCTCTCCCAAACCCCGCTAGGATACAGC
CGCGGCTCAGTTTTGCCAGGATGTCAGGCTAGAATACTACCCTACCTTCA
TGTTCTTCGGAGCTGGAAAATTCCACGACCACGACCCGTTGTCGGGGGCG
ATTCTGGGGCCCCGGCCGACAGAGCACGAGTCGACAGCGAAGGTAAGGCT
CCATTTTGGACCTTTACCTCAACCTCGATCCCGACCGCTGGGCACCAGGC
CCTGGATTCTACAAGGTGCCGAGCAAATCAGAAGTCACCTTTCCTTCCCG
CAGAACGTGGCTTCTTTGTCGAGAGCGATTTCGAGGTCGATCCCGACCAG
AGAGGAAACTCGTCAGCGGACCGGCGTGCCACCGCGTGTGCACGTGTGAC
CTCACAACTCGGTGCTCTGCACAAGACCGGGTCCGTGCCATGTTCCGCAA
CTGACGCCGTCGCTTACTTGCCTGCTTTCTTGCCTGTCTGCCTCCTGTCT
TCCTGCTGTTCGCATCCCCTCCACTATTTGTCGGTTCCTCTCCTCCCGGA
ATTCCACGCATCCTGGGTTTGCACGGTGCGGCGCGGCATGGCATGGTACA
CCGTTGCGGATGCCACGCGGTGCAAACAAAATTGAACAAAAAAATTACTG
ACGGAATCCCATCAGTTCCCGTCGGGCGCGATGGTGTACCACGAGGTCAT
GGCGGACTGGGCCGAGACGATGCACCTCATCAGCAGCTCCAACCGAGTGA
TGGAGAAGATTAATATCTTTAGATGGGGCCGAGGCCGGGGGAAAGAGAAA
GCCTCCGAACAGGAGCAGTTGATCGCGGAGATCGAAGCCTTGGAGCGAAA
GGTGCGCGTCCCGCGCGCGGGAAGGGACGGGGCCGGTGGACTGCGACGGG
GACCGGAAGCGGGTGGCGCCGCGTCACCGGTATAACTAGTGGTGAAAATG
ATACGTGTGAAATCCCTGTCGCCGGAACCTGTCTCTCCCGTGGAGAACAC
AAATGGTTTCCGGTCAAGCTTCCTCGCTTTGTGGAGGCGTCTATCGGTTG
GAAGTCGCGAGTCAGGCCTCAAGCGAGGATTCCATTGTATCGTTGGTCGT
TGTCCGCTTCTTTCCTGTCGACACGTGCGGCGTGTCAGGTCCGACTGCCG
TGATTCCGAAGGCAGGCAGGCATGCTGGGGTCCACACCCTCCCTGAAGTG
CAGGCCATACCCTCTCTGAAGTGCGGGCTTGCCTCACCGGATGCAAAGCG
CCGGCGCGTGGTTTGTGGTCCACGCGTGCCGATTGCACAGTGCCTTGCTG
ATCGTCCGTACTCGCGCATGCTCTTCATCTCCTTCACAGGCCCAGCACTT
GGAACAGACGATGGCCCGTGCCGGCGGAGCCGAAGCGGCTGTGCAGGAGG
CGAGCAGTCTGCCATACGGCTACGGGGATCCTTACAGGGAGCTTATGGAG
GTACGGCGTGGCTGGCCCCAAACCATTCATGCAAATGCGCTGAAGCGCAT
GGAGAGGTAGCAGCGTGGTTGAGCACCGCCTTTCGGACACGATCTTTTAG
TTGCTTTGCGTGCATCTGTTTAATGTGTTGCTGTGCGACGTAGTCACGGG
TGGCTTCACACGAGCCATCTGACACTGGTTGTCGGCCTTAGTGGAAGGGT
GTCGCTTCACCGTGCAAGTTTGACGAAGAGACTCTCGATTCCATGGTCAA
GCTATGCTCATGTTGTGGCAATATTATTTAATGTTGCGGGGTGCGCGTTC
GATGCCTCCCGTGGGTATGCGTGCAAGAGCGGGCTCCAATCCGTGACGCA
TGTCTGAGTCGGCGAGCGCTGAAGTCTCCTTGCAGTTCAGCTTTCTCTGA
CCAGCGTCGGGTTTGACGTCAACTTGCTCGTAAGGGACCTGGGCAAGCGC
TGAATTCTCCTTGTGTTTCAGCTCGTACTTGCGAGCTTCGAGTTTGACGT
CAACGTGCTCGTAGGGGATCCGAGCTCCGCACTGCCGTGCTTGTGGTTTC
TATTTGGTCATCTGCTGGGTGGCCGATGTGCCCTATTGTACTGTCGAGTA
TACTTCCCGGAGAAAGGCAATGCCGAGTCATGCCGAAGAACACGTCTCGT
GAAAACGAGCGCGACCAGTCGACCGGATGGATGGACGGGGGCAGCATCCA
AACAAGCGACTTGTTTGCGTTCCGTGGAAGAAGCAGGCAGAGAGAGCGTT
CCCAGTTCTTAGCGCCTCCCCGCTCCTGCGGTCAGATCGCCTCCGCCCAC
GGCATGGTATTTGCACGGCATGGCCTCTTTCACCATGACATGCTGTTGCG
GCCCGTCCCTGTATATCCAGGTGGGCTACGACCCCGAGTTTGAGCCGGTG
ATGCAGTGCGTCATCGACATGGCGGGGCAGTACTGCGAAGCGGAGGGCAT
CAAGGAGCTTGACCCTTGGTGCAGCATCCTTGATGTAGGTGACTTTTGAT
AAGAGAGACCTCCTTGCTTGAGGCGTGGACGCCCAAGGGCACTGGGCTTG
GGTTCATCTGTTGCGTCAAGCGTCTTGGTATAAATAATGTAACATTTCGG
AGTTCGCCAAAGACCTGCGGCTGGACTTCCACATCGCGGCCGTCCCCTGC
TTGGTGTGAGTATTCGCATAAAGGGGTACCACGTGTGCTTTCGTTGCGAC
GCTGACAAACTTGCCCGATCGCATGTGGATCGTGCGTTTGTCTGTTTCTG
TTTCTGTGTATCTCTTCGTCTCCTTCAAATCAACAGTCTTGCGTCGCCAC
GGACTTTCAAGGGGCAGAGTGCTGGCCTTCGAGCTGCCCTCTTCTCGATG
AGGGTTGCCAGATCACTAGCTTCTGCCTTGCACCAGAGCTAGTTGAGGTG
AGCGAAAGCATCAACATGGCATCGGCAGTCACTGATACGAGCGAAAATCT
TTTGGGGGCTGGTGTAGTGCACTTCCTTGCTCGTCTCAGCTAAGCACACG
AACGATGGCGTTCGTTTCCGTAGCAGTGGTAGCAGCAGGAGGATCAGGAG
GCAAAACGAGAGGGGATGGGCAGGGAATGAAAGCATTTCAGATTCGCGTC
GAGCTTGATCTATGCTGGTTGCCAGCCGTCTAGAGATGGAGATTATTTGC
AGGGTGTCGAACAGTTCGACGGTCGGCTTGTGATTGACGTTGTTTCGCAA
GGACTGATCTGGCACTCGTTCGTGACCTCGAACATTTGTTTTGCATCAAT
TCCCTAACCCCCACCCTCGCCCTTGAAAAGAGGAAACCACGTTTTATGCT
CGGGCCCTGCTGCCGGTACGTCTCCGACGCCAAACCAACTCACGCCCTAC
GCCCCGCCCTCCCTCGCCCCTTCTTTTCTCAAATACTCCGGAGTAAAGCT
GTATATTGACCTTCACACCAAACATCTCGAAGATAACAAGGGACTCGCTG
GCGGGGAGGCGAGAGAACTCGGGATTCGGCCGGAAGGGGGGTTGGCAGAG
GCGGCGGAGCAGTCTGGGGAACAACCAGCGGTGCAATCAGGGGAAGCGGC
CACCCTTCCACCCTTCTTCGGGCGTCGACACGGTGCTGGTGCTGGCGGGG
TAGATAGGACAGGGGACGAGAGAGGGGAAACTGTCGCGGCATAATTTTCG
AGGATTTGGGGTGTTGCGAGAGTGTTCCTTCTGTCTGATGCAAAAGCCGA
CCGCGGATCACGTAGAGCATGCGTACATCGGTGGAGTCGCGTTTTCTCTA
GTTGCAGATGTGCGTAATTGTGGGAGTTCTTCGACCGGCGGTACATGCAG
CCGGTTCTGGTGGACGGAGGAATTTGTAGTGTTTTTTTATTTAGGCTTTT
GTTGTAGGACACATGAAAACGCCGTGCGTTCGTTTCACCTGCAACGTGAT
AATGGAGTGTTTGATTTTCTGTTCATTCGAAGTAGATCCAACAAATTGTA
TGGCGCAGCGTTCACGACTTCTGAGGATATTTGACCCGCTCTACCCGTTT
CCATGTAGCGAGATTCAAGGATACCATCGCCCTTGTAGAGTCAGTCATTG
TCGCGCAAGTTTATCACTGGTCAAGCGAAAAATACAACAGCAGTAGACGT
ATCACAGAAAATGCTTCAGTAGGACAATTTCTACGTTGACGGCAGCCCAA
GCGACGTCTGTTGAGGAACGGTTGGACGCGCGCGCCGGATCAGAGTTCCG
ATGCTCGTGAAGATTATAGTATTTTACGGTCGTAGCGAGCCTAGACTGCA
TGAGCTCGGGGCGCCGGGGGTAGAAGAAGCGGGCAAAAATGTGAGAGCAA
AGAACCTGGTTTGTGTGGGAAATAGGAGTGTGCTGCCGATGCCGTTTGAA
GGTCTTCGCGAGCAAGATAGTTTGCTCCAAAGCTTGACAGCGGGCAAACG
ATACTTGCGGCGAATACGAGTGCCATTCTTTCATCGAGGCGAACCTCGCC
CTTTCCCACCCCGGTGGCCTAGTTGGTATCCCCGTACCCTCCTAGCAGGC
AAGGGCGTGGGTTCGAATCCCAGCGTAAGCGACTTTTTCTCACGAAACGT
GTTTATTCTTGCGTTCTTGCCGGTGGATAGCGCGTAGTGCGCGTTCACAC
ACGTGGACAGATGTTGCTGAGACTGGTCTAGCGATAAAAACTATCAGTCG
GCACAACCGGAGGACGGGAGTGGGGACCTCAGGG
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Coding sequence (CDS) from alignment at P-fluviatile_contig14:1788868..1795051-

>mRNA_P-fluviatile_contig14.2206.1 ID=mRNA_P-fluviatile_contig14.2206.1|Name=mRNA_P-fluviatile_contig14.2206.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2166bp|location=Sequence derived from alignment at P-fluviatile_contig14:1788868..1795051- (Porterinema fluviatile SAG_2381)
ATGCGTCATTGGACCAAGGATTACGCGGTCATGTTCTACGCTCCTTGGTG
CAAACACTGCAAATGCGTCATTGGACCAAGGATTACGCGGTCATGTTCTA
CGCTCCTTGGTGCAAACACTGCAAGGAGGACTTCTTACCTCTCTGGGAAG
GTGTGTCGAAGCAGCTGGCGCACAAGGACCCCAAAGGGAAGCGAAAGCTG
GTGATGGGCAAATTCAACTGCGAGCAGGGAGGACTTCTTACCTCTCTGGG
AAGGTGTGTCGAAGCAGCTGGCGCACAAGGACCCCAAAGGGAAGCGAAAG
CTGGTGATGGGCAAATTCAACTGCGAGCAGGATACAGCCGCGGCTCAGTT
TTGCCAGGATGTCAGGCTAGAATACTACCCTACCTTCATGTTCTTCGGAG
CTGGAAAATTCCACGACCACGACCCGTTGTCGGGGGCGATTCTGGGGCCC
CGGCCGACAGAGCACGAGTCGACAGCGAAGGATACAGCCGCGGCTCAGTT
TTGCCAGGATGTCAGGCTAGAATACTACCCTACCTTCATGTTCTTCGGAG
CTGGAAAATTCCACGACCACGACCCGTTGTCGGGGGCGATTCTGGGGCCC
CGGCCGACAGAGCACGAGTCGACAGCGAAGTTCCCGTCGGGCGCGATGGT
GTACCACGAGGTCATGGCGGACTGGGCCGAGACGATGCACCTCATCAGCA
GCTCCAACCGAGTGATGGAGAAGATTAATATCTTTAGATGGGGCCGAGGC
CGGGGGAAAGAGAAAGCCTCCGAACAGGAGCAGTTGATCGCGGAGATCGA
AGCCTTGGAGCGAAAGTTCCCGTCGGGCGCGATGGTGTACCACGAGGTCA
TGGCGGACTGGGCCGAGACGATGCACCTCATCAGCAGCTCCAACCGAGTG
ATGGAGAAGATTAATATCTTTAGATGGGGCCGAGGCCGGGGGAAAGAGAA
AGCCTCCGAACAGGAGCAGTTGATCGCGGAGATCGAAGCCTTGGAGCGAA
AGGCCCAGCACTTGGAACAGACGATGGCCCGTGCCGGCGGAGCCGAAGCG
GCTGTGCAGGAGGCGAGCAGTCTGCCATACGGCTACGGGGATCCTTACAG
GGAGCTTATGGAGGCCCAGCACTTGGAACAGACGATGGCCCGTGCCGGCG
GAGCCGAAGCGGCTGTGCAGGAGGCGAGCAGTCTGCCATACGGCTACGGG
GATCCTTACAGGGAGCTTATGGAGGTGGGCTACGACCCCGAGTTTGAGCC
GGTGATGCAGTGCGTCATCGACATGGCGGGGCAGTACTGCGAAGCGGAGG
GCATCAAGGAGCTTGACCCTTGGTGCAGCATCCTTGATGTGGGCTACGAC
CCCGAGTTTGAGCCGGTGATGCAGTGCGTCATCGACATGGCGGGGCAGTA
CTGCGAAGCGGAGGGCATCAAGGAGCTTGACCCTTGGTGCAGCATCCTTG
ATTCTTGCGTCGCCACGGACTTTCAAGGGGCAGAGTGCTGGCCTTCGAGC
TGCCCTCTTCTCGATGAGGGTTGCCAGATCACTAGCTTCTGCCTTGCACC
AGAGCTAGTTGAGTCTTGCGTCGCCACGGACTTTCAAGGGGCAGAGTGCT
GGCCTTCGAGCTGCCCTCTTCTCGATGAGGGTTGCCAGATCACTAGCTTC
TGCCTTGCACCAGAGCTAGTTGAGCTGTATATTGACCTTCACACCAAACA
TCTCGAAGATAACAAGGGACTCGCTGGCGGGGAGGCGAGAGAACTCGGGA
TTCGGCCGGAAGGGGGGTTGGCAGAGGCGGCGGAGCAGTCTGGGGAACAA
CCAGCGGTGCAATCAGGGGAAGCGGCCACCCTTCCACCCTTCTTCGGGCG
TCGACACGGTGCTGGTGCTGGCGGGGTAGATAGGACAGGGGACGAGAGAG
GGGAAACTGTCGCGGCATAACTGTATATTGACCTTCACACCAAACATCTC
GAAGATAACAAGGGACTCGCTGGCGGGGAGGCGAGAGAACTCGGGATTCG
GCCGGAAGGGGGGTTGGCAGAGGCGGCGGAGCAGTCTGGGGAACAACCAG
CGGTGCAATCAGGGGAAGCGGCCACCCTTCCACCCTTCTTCGGGCGTCGA
CACGGTGCTGGTGCTGGCGGGGTAGATAGGACAGGGGACGAGAGAGGGGA
AACTGTCGCGGCATAA
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