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Homology
BLAST of mRNA_P-fluviatile_contig14.2159.1 vs. uniprot
Match: D7FQB1_ECTSI (SAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB1_ECTSI) HSP 1 Score: 575 bits (1482), Expect = 2.350e-190 Identity = 401/643 (62.36%), Postives = 437/643 (67.96%), Query Frame = 3
Query: 780 MVRDDGFAAAPPMQ--HPSLPVSRHHL--------HATSRDVLSDGSFMGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKIKTGCNMWVDQRALKLTITGPDLACVEHAAKSVDAYVAAAPIKAGAVEAAVTKTLDCPPQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDVRSVELASASVQVMITNALNGNYGLDLRVNTPDSHGSYGGGG-----------YFPDGSISNXXXXXXXXXXXXXXXXXXXXXXXXGESHTSAP----------HFRDDNHHRP-----RSAVTPEFRHLAPWQQEQQLLELKGDLSCQQQQPLHRGHQXXXXXXXXXXXXXXXXXXXIETVSLVSMGARTPVSSTAGSPRVAASYTTSPALSAMASTPIGDWSLFSGGFGLGVAAL-EGESS-SRSSTPTASITT-RVHFPEGLHALGEGGDDSISGGSDDGRASAAP-----IEGATGLLSPSTRAASAPNEASLSAAAHGRGKPMGSRAPPPSPASAAGGDMSHRPRSLPVPEARVLSLLEGEEADDDDQEDAETRSVAAGGDGA------QDVAEKVARLGKLLQAMGLGKYCEKFANNEVDLEALGLMSEGDLADIGIPKGPRLKILNAVGARA 2558
MVRDDGFAAAP MQ H S+ SRHH + R+VL +GSFMGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMK KTGCNMWVDQRALKLTITGPDL VEHAAKSVDAYVAAAPIKAGAVEAAVTKT++CPPQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGD RSV+LA SV+ MI NA++G+YGL LRV+TPDSHGS+G GG YFPDG++S XXXXXXXXX XXXXG H P H D HH + T EF HLA WQQEQ XXXXXXXXXXXXXXXX IETVSL S+GARTPVSSTAGSPRV SY TSPALS ASTP+GDWSLFSGGFG+G+AAL EGESS SRSSTPT + TT RVHFPEGL AL G GRASAA + +GLLSP++ A N SPA AGG+ S R LPVPEA+VLS LEG+ +D ++ +D+++KVARLGK+LQ MGLGKYC KFA NEVDLEALGLMSE DLADIGIPKGPRLKILNAVGARA
Sbjct: 1 MVRDDGFAAAPQMQQHHGSMSASRHHQPQQQPLGSSSAGREVLGEGSFMGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKHKTGCNMWVDQRALKLTITGPDLPSVEHAAKSVDAYVAAAPIKAGAVEAAVTKTIECPPQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDHRSVDLAYESVRAMIHNAVHGSYGLGLRVSTPDSHGSFGVGGXXXXXXXXXXXYFPDGAMSXXXXXXXXXXMRSPLVSGAVAXXXXGMHHLMLPSTAGGAGGSSHADPDLHHLAAPDYRHARDTAEFHHLATWQQEQXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXDSEIETVSLGSIGARTPVSSTAGSPRVVGSYNTSPALSGTASTPVGDWSLFSGGFGIGMAALQEGESSTSRSSTPTTARTTPRVHFPEGLRALVGGA----------GRASAASAGDLAVLKGSGLLSPASAADG--NSGXXXXXXXXXXXXXXXXXXXXSPALTAGGEASRRMAGLPVPEAQVLSALEGQTSDGEEXXXXXXXXXXXXXXXXXXXXXXEDISDKVARLGKVLQTMGLGKYCPKFAENEVDLEALGLMSESDLADIGIPKGPRLKILNAVGARA 627
BLAST of mRNA_P-fluviatile_contig14.2159.1 vs. uniprot
Match: A0A835ZGS8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS8_9STRA) HSP 1 Score: 243 bits (619), Expect = 8.140e-70 Identity = 132/185 (71.35%), Postives = 147/185 (79.46%), Query Frame = 3
Query: 831 LPVSRHHLHA--TSRDVLSDGSFM---GRG-----YSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKIKTGCNMWVDQRALKLTITGPDLACVEHAAKSVDAYVAAAPIKAGAVEAAVTKTLDCPPQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDVRSVELASASVQVMITNA 1355
L +S+HH A T D + F G G YSIKRCQGFVRCDMDIDAEVVGWVIGK+GSTIKD+K KTGCNMWVDQRALKLTITGPD+ VEHAAKSV+AYVAAAPIKAGAVEAAVT++LDCPP LLD LGDR TIARIVKET AQVVVNKK+ R+IVRG +V++A VQ +IT A
Sbjct: 7 LHLSQHHYGAGLTEHDYGTSSDFSLLSGLGSPFSTYSIKRCQGFVRCDMDIDAEVVGWVIGKSGSTIKDLKNKTGCNMWVDQRALKLTITGPDVRTVEHAAKSVEAYVAAAPIKAGAVEAAVTRSLDCPPHLLDVLGDRATIARIVKETRAQVVVNKKMARVIVRGGPHAVQMACGKVQAIITAA 191
BLAST of mRNA_P-fluviatile_contig14.2159.1 vs. uniprot
Match: A0A835YT56_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT56_9STRA) HSP 1 Score: 239 bits (610), Expect = 8.640e-66 Identity = 125/191 (65.45%), Postives = 146/191 (76.44%), Query Frame = 3
Query: 792 DGFAAAPPMQHPSL---PVSRHHLHATSRDVLSDGSFMGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKIKTGCNMWVDQRALKLTITGPDLACVEHAAKSVDAYVAAAPIKAGAVEAAVTKTLDCPPQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDVRSVELASASVQVMITNA 1355
+G+A PP Q P L P +L++ YSIKRCQGF+RCDMDIDAEVVGWVIG+NGSTIKD+K KTGCNMWVDQRALKLTITGPD+ VEHAAK V+AYVAAAPIKAGAVEAAVT++L+CPP LLD LGDR TIARIVKET AQVVVNKK+ R+I+RG+ +V +A +Q +I A
Sbjct: 16 EGWATPPPGQLPHLYGEPGDMERQQYDELSLLNNIMAPFSPYSIKRCQGFIRCDMDIDAEVVGWVIGRNGSTIKDLKNKTGCNMWVDQRALKLTITGPDVCAVEHAAKCVEAYVAAAPIKAGAVEAAVTRSLECPPHLLDMLGDRATIARIVKETRAQVVVNKKMARVIIRGNAHAVHMACGRIQTIIAAA 206
BLAST of mRNA_P-fluviatile_contig14.2159.1 vs. uniprot
Match: D7FHT5_ECTSI (SAM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT5_ECTSI) HSP 1 Score: 122 bits (305), Expect = 9.430e-25 Identity = 70/162 (43.21%), Postives = 103/162 (63.58%), Query Frame = 3
Query: 912 IKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKIKTGCNMWVDQRALKLTITGPDLACVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTLDCPPQLLDDLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDVRSVELASASVQVMITNALNGNYGLDL 1382
++R GFVRC MDI EVVGWVIG++G+ IK+MK ++GC MWVDQ+ LKL ITG D+ + AA V ++ AP+ AG + + ++CPP L+ L R +TI RI +E+ A VV+N+K+ ++IV G +SV L A ++ +IT + +G L
Sbjct: 25 LERFPGFVRCVMDIAPEVVGWVIGRSGAHIKEMKHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVITFGRSAEHGAGL 186
BLAST of mRNA_P-fluviatile_contig14.2159.1 vs. uniprot
Match: A0A835YRS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRS0_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.870e-20 Identity = 60/127 (47.24%), Postives = 86/127 (67.72%), Query Frame = 3
Query: 912 IKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKIKTGCNMWVDQRALKLTITGPDLACVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTLDCPPQLLDDLGDR--TTIARIVKETHAQVVVNKKI 1277
+++ GFVRC +DI EVVGWVIG++GS IK+MK ++GC MWVDQ+ LKL ITG D+ + AA V ++ AP+ AG + V++ +DCPP L+ L R +TI RI +E+ A VV+N+K+
Sbjct: 292 LEKFPGFVRCVIDIAPEVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKAPVNMNAAGVDDEVVSQMIDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKM 418
BLAST of mRNA_P-fluviatile_contig14.2159.1 vs. uniprot
Match: A0A836CJQ9_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJQ9_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.910e-15 Identity = 61/165 (36.97%), Postives = 88/165 (53.33%), Query Frame = 3
Query: 960 EVVGWVIGKNGSTIKDMKIKTGCNMWVDQRALKLTITGPDLACVEHAAKSVDAYVAAAPI---------------------------------KAGAVEAAVTKTLDCPPQLLDDLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDVRSVELASASVQVMIT 1349
EVVGWVIG++GS IK+MK ++GC MWVDQ+ LKL ITG D+ + AA V ++ P AG + V++ +DCPP L+ L R +TI RI +E+ A VV+N+K+ ++IV G +SV LA A ++ + T
Sbjct: 318 EVVGWVIGRSGSHIKEMKHRSGCGMWVDQKDLKLYITGTDMPRIHIAAGMVADLISKVPYVPSFKGMYRAYQXXXXXXXXXXXXXXXXXVNVSAAGVEDEVVSQMMDCPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLAVAMIEDVFT 482
BLAST of mRNA_P-fluviatile_contig14.2159.1 vs. uniprot
Match: A0A6H5JET1_9PHAE (SAM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET1_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 1.560e-10 Identity = 47/127 (37.01%), Postives = 76/127 (59.84%), Query Frame = 3
Query: 1008 MKIKTGCNMWVDQRALKLTITGPDLACVEHAAKSVDAYVAAAPIK---AGAVEAAVTKTLDCPPQLLDDLGDR--TTIARIVKETHAQVVVNKKIGRIIVRGDVRSVELASASVQVMITNALNGNYG 1373
++ ++GC MWVDQ+ LKL ITG D+ + AA V ++ AP+ AG + + ++CPP L+ L R +TI RI +E+ A VV+N+K+ ++IV G +SV L A ++ +IT + +G
Sbjct: 59 LRHRSGCGMWVDQKDLKLYITGADMPRIHAAAALVGDLISKAPVNVNSAGVEDEVTSHMIECPPHLIGLLIGRGGSTIKRIKEESRANVVINQKMMKVIVSGIPQSVRLGVAMIEDVITFGRSAEHG 185
BLAST of mRNA_P-fluviatile_contig14.2159.1 vs. uniprot
Match: A0A382VC15_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382VC15_9ZZZZ) HSP 1 Score: 63.9 bits (154), Expect = 7.490e-8 Identity = 37/126 (29.37%), Postives = 63/126 (50.00%), Query Frame = 3
Query: 2403 LQAMGLGKYCEKFANNEVDLEALGLMSEGDLADIGIPKGPRLKILNAVGARAGPRPTTPPPSEAWIVLDKSFSRSSNSARGGLEV------GYRERFRALPSNKSSV*SSG*PPGRPLLIIKFGSS 2762
L +GL KY + FA NE+DL+A+GL+SE D ++G+P GPR K+L AV P SE +LD++ ++ R + G+ + + ++ +G G ++ ++G S
Sbjct: 9 LDNLGLSKYADVFAENEIDLDAVGLLSEEDFKELGLPMGPRRKLLAAVDGIQSPTV-----SEKSEILDETILANNQGERRQVTALFADIAGFTRLSSGMDAEETHAMLNGFFAGVDQMVTRYGGS 129
BLAST of mRNA_P-fluviatile_contig14.2159.1 vs. uniprot
Match: A0A7S1SBX6_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1SBX6_ALECA) HSP 1 Score: 65.9 bits (159), Expect = 2.720e-7 Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 3
Query: 2373 AEKVARLGKLLQAMGLGKYCEKFANNEVDLEALGLMSEGDLADIGIPKGPRLKILNAVG 2549
A + A L LLQ++GLGKY E+ EVDL AL L+SE DLAD+G+P GPR K+ A+G
Sbjct: 421 ARRSAALDDLLQSLGLGKYVERLRAEEVDLAALRLLSERDLADLGLPLGPRRKLQAAIG 479
BLAST of mRNA_P-fluviatile_contig14.2159.1 vs. uniprot
Match: A0A1X7U136_AMPQE (SAM domain-containing protein n=3 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7U136_AMPQE) HSP 1 Score: 65.1 bits (157), Expect = 9.430e-7 Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 3
Query: 2391 LGKLLQAMGLGKYCEKFANNEVDLEALGLMSEGDLADIGIPKGPRLKILNAVGAR 2555
L LL +GL KY F NE+D AL LMSE D A++GIPKGPR+K+LNA+G +
Sbjct: 2689 LSGLLDKLGLSKYHNLFQKNEIDHHALLLMSEKDFAEVGIPKGPRVKLLNAIGRK 2743
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Metazoa |
| Seed ortholog score | 64.3 |
| Seed ortholog evalue | 2.6e-07 |
| Seed eggNOG ortholog | 400682.PAC_15712215 |
| Preferred name | ANKRD17 |
| KEGG ko | ko:K16726 |
| GOs | GO:0000785,GO:0001568,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0001817,GO:0001819,GO:0001944,GO:0001955,GO:0002376,GO:0002682,GO:0002684,GO:0002697,GO:0002699,GO:0002831,GO:0002833,GO:0003674,GO:0003682,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005694,GO:0005737,GO:0006275,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007005,GO:0007010,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007346,GO:0007399,GO:0007423,GO:0007492,GO:0008150,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009887,GO:0009888,GO:0009889,GO:0009892,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010506,GO:0010507,GO:0010556,GO:0010564,GO:0010639,GO:0010646,GO:0010647,GO:0010821,GO:0010823,GO:0010927,GO:0010941,GO:0012505,GO:0016020,GO:0016043,GO:0019219,GO:0019222,GO:0019730,GO:0019899,GO:0019900,GO:0019901,GO:0021700,GO:0022008,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030036,GO:0030154,GO:0030182,GO:0030239,GO:0031032,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031329,GO:0031330,GO:0031347,GO:0031349,GO:0031430,GO:0031672,GO:0031674,GO:0031965,GO:0031967,GO:0031975,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032989,GO:0033043,GO:0039531,GO:0039533,GO:0039535,GO:0040011,GO:0042692,GO:0042742,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043122,GO:0043123,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043292,GO:0043900,GO:0043902,GO:0044085,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0045087,GO:0045088,GO:0045089,GO:0045214,GO:0045595,GO:0045596,GO:0045787,GO:0045931,GO:0046530,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048592,GO:0048646,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0050688,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051093,GO:0051128,GO:0051129,GO:0051146,GO:0051147,GO:0051148,GO:0051150,GO:0051151,GO:0051171,GO:0051239,GO:0051240,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0055001,GO:0055002,GO:0060255,GO:0060361,GO:0060548,GO:0061061,GO:0065007,GO:0070925,GO:0071695,GO:0071840,GO:0072358,GO:0072359,GO:0080090,GO:0080134,GO:0090068,GO:0090596,GO:0097435,GO:0098542,GO:0099080,GO:0099081,GO:0099512,GO:1900087,GO:1900245,GO:1900246,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902531,GO:1902533,GO:1902806,GO:1902808,GO:1903146,GO:1903147,GO:2000045,GO:2000112 |
| EggNOG free text desc. | positive regulation of MDA-5 signaling pathway |
| EggNOG OGs | 38I05@33154,3BHRH@33208,COG0666@1,KOG0504@2759,KOG4369@1,KOG4369@2759 |
| COG Functional cat. | T |
| Best tax level | Metazoa |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03036 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | K Homology domain |
| Ec32 ortholog | Ec-01_006780.1 |
| Exons | 2 |
| Model size | 3200 |
| Cds size | 2121 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815613.4978297-UTR-P-fluviatile_contig14:1413855..1414442 | 1622815613.4978297-UTR-P-fluviatile_contig14:1413855..1414442 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig14 1413856..1414442 + |
| 1693562437.9424114-UTR-P-fluviatile_contig14:1413855..1414442 | 1693562437.9424114-UTR-P-fluviatile_contig14:1413855..1414442 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig14 1413856..1414442 + |
| 1622815613.5362802-UTR-P-fluviatile_contig14:1418483..1418975 | 1622815613.5362802-UTR-P-fluviatile_contig14:1418483..1418975 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig14 1418484..1418975 + |
| 1693562437.9739282-UTR-P-fluviatile_contig14:1418483..1418975 | 1693562437.9739282-UTR-P-fluviatile_contig14:1418483..1418975 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig14 1418484..1418975 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815613.510897-CDS-P-fluviatile_contig14:1414442..1414845 | 1622815613.510897-CDS-P-fluviatile_contig14:1414442..1414845 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1414443..1414845 + |
| 1693562437.9564276-CDS-P-fluviatile_contig14:1414442..1414845 | 1693562437.9564276-CDS-P-fluviatile_contig14:1414442..1414845 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1414443..1414845 + |
| 1622815613.5243022-CDS-P-fluviatile_contig14:1416765..1418483 | 1622815613.5243022-CDS-P-fluviatile_contig14:1416765..1418483 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1416766..1418483 + |
| 1693562437.9658434-CDS-P-fluviatile_contig14:1416765..1418483 | 1693562437.9658434-CDS-P-fluviatile_contig14:1416765..1418483 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 1416766..1418483 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2159.1 >prot_P-fluviatile_contig14.2159.1 ID=prot_P-fluviatile_contig14.2159.1|Name=mRNA_P-fluviatile_contig14.2159.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=707bp
MSPIYPQHQIVDSHHMAHAAAWDGSSRQPRPSAPYAHQHQQHQQDQHQWP VQGPLHINNPAAAGMVRDDGFAAAPPMQHPSLPVSRHHLHATSRDVLSDG SFMGRGYSIKRCQGFVRCDMDIDAEVVGWVIGKNGSTIKDMKIKTGCNMW VDQRALKLTITGPDLACVEHAAKSVDAYVAAAPIKAGAVEAAVTKTLDCP PQLLDDLGDRTTIARIVKETHAQVVVNKKIGRIIVRGDVRSVELASASVQ VMITNALNGNYGLDLRVNTPDSHGSYGGGGYFPDGSISNRRSGGGGGASP GMGMHHMMPPSSSGESHTSAPHFRDDNHHRPRSAVTPEFRHLAPWQQEQQ LLELKGDLSCQQQQPLHRGHQHHHQHHHGRGGGSDSDESEIETVSLVSMG ARTPVSSTAGSPRVAASYTTSPALSAMASTPIGDWSLFSGGFGLGVAALE GESSSRSSTPTASITTRVHFPEGLHALGEGGDDSISGGSDDGRASAAPIE GATGLLSPSTRAASAPNEASLSAAAHGRGKPMGSRAPPPSPASAAGGDMS HRPRSLPVPEARVLSLLEGEEADDDDQEDAETRSVAAGGDGAQDVAEKVA RLGKLLQAMGLGKYCEKFANNEVDLEALGLMSEGDLADIGIPKGPRLKIL NAVGARAGPRPTTPPPSEAWIVLDKSFSRSSNSARGGLEVGYRERFRALP SNKSSV* back to topmRNA from alignment at P-fluviatile_contig14:1413856..1418975+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig14.2159.1 ID=mRNA_P-fluviatile_contig14.2159.1|Name=mRNA_P-fluviatile_contig14.2159.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5120bp|location=Sequence derived from alignment at P-fluviatile_contig14:1413856..1418975+ (Porterinema fluviatile SAG_2381) TGTACTAAGTGTATGTCTCTCCATTCGGCGTGCGGGCCACGGGAAGCCAA
GGAACGTCGGGAATGGTCCTCAAAAATAACCCGAGGTTCTGAATTCTCGG
CCAATCAAGGGGCGCCAACTCCCCCTGCATGCCCCCTATCCCTCTCCCGG
GGAAACACCCACGTACGACCCGATTTTTGTCTCTTTTCCTCTCTCCGGTC
GCTCTCTCCTCCGACACAATCTCCCTTCCAGAATAACGCGTACGCGCATT
GTATAATTCAACGCTAGACGCGGTGCGACCTGAATCAGAGACCGCGACAG
CCCCAGCTCCCGCCAGAAGATCAGCTCGCTCACTTCCTCCTCGGGTTCAG
CTTCGATCGATTTCCTCGGGTCGACAACAGCAGCAGCGCCGGGTGCGCCT
CTCTTCTGACGCGAATTTGCCGACCTTTCCCGGGCCAGCCTCCCGCTATC
CCACAACGCAACCACACCAGACGCCGAGGGAGAAGCGGGACGTGTTCAGC
AGAGAAACTCTGCAGAACAACGCCGCCGGGGACCGAAATAAGCTGGAGGA
CTTTTGGGCCAAGGCAGAGCAGCTGGAGGCGGAGAAGATGTCGCCGATTT
ATCCACAGCACCAGATCGTAGATAGCCACCACATGGCCCACGCGGCGGCC
TGGGACGGCAGCAGCAGGCAGCCACGCCCGAGCGCGCCCTACGCTCATCA
GCACCAGCAGCACCAGCAGGACCAGCACCAATGGCCCGTACAAGGACCGC
TCCACATCAACAACCCGGCGGCGGCGGGGATGGTCCGCGATGACGGATTC
GCTGCTGCTCCGCCGATGCAGCACCCGAGTCTTCCCGTTTCTCGCCACCA
CCTTCACGCCACAAGCCGGGATGTCCTCAGCGATGGATCCTTTATGGGGC
GAGGCTACAGCATCAAGCGGTGCCAGGGATTCGTGAGGTGTGACATGGAC
ATTGACGCTGAGGTTGTCGGATGGGTCATCGGAAAAAATGGTGAGCGAGA
GAATGAGCGCGCACACGAGTGTGTGTGTCGTGACACACTCGATTTTTGTA
TTCACCTGTGTTCGAAAGGACACGGCGCAGTTGAGAACGGAAAGACCGAC
GGAGTATAATGCCACTTTTCCCCCGGGAGATCAAGAGAACGGGCACCCGA
CGCAAGTACACCCACCCCGTAGCATTCCTCGTTTACGCTTAATTGTAGCC
TTCGCCTGTCGTGCGATGCAGCCAGGCCCTTTCCTCTCGTTCCACGCGCG
GGTCTTTTTATCGGATGCCCAACTGAATCCAGAGGTGGACACGCGCACAC
GAGTGCGGTTTTTTTCCGTGAAGGGCCGCGCGTTAAACGTCACGTACATC
GAGTCAAAAGTGCCTAATAGCATGGTCTCGACTCTTCTCCGCCTTCGAGC
TCCCCTCACATGCATTATACCTGAAGGCTCCTGTACCCGCATACCCTCTG
ACTCATAGCATATACATACCCGAAAATTTCCGCCCCGCGTTTCGAAAAGG
GCCCTTTTGAAAACGTAGTCCGTGATTCAACTTGAGCGAACCCACGAGCA
ACAATCTGTCATTTTGCGAACATGATCGGAGAATACCCACCGCTTCGTAG
ACTCTGGTTTTTTGTCGTGGATCGCCAACAATTTTCTTTTCCTGCTTGCG
ATTTGGGCGTGCCCATGTGTTTTGCGCTCGACCTTAATGCATCGGTGAAA
GGCAAAGACACGCTGGAAATGCCTTTCGCACTCAAAACTGTCATGATACT
GGATGTGATGGTCAATTTTGGACGTGCTTCGTATGCAGATCTCCGCTCAC
GATCAACAATTTCATTCTCGACTGCGCGAAGTGCTCGTTGGACTGCGGTC
CTCACAAAGCGTTAGCACGTGTGCGTGCAGCATCCCCGGAGCCGTTGGTA
TCTTGTTTGGCAGCCGGCAGCTCCTGTCGTACCCCGCTCTCGTCCCGTGA
GAGTCAATTTTTTTTCTTTTTCCATCCGTCCGTTCACCCTTCGTGTGTGT
GTTGTCGTTCGGAATAGTGGCCGTTATTTCGTCCAGCCGCCGGAGTCACG
TACTTGCATTTGTTTCAGTCCTTTCTTTCTCCCTTTGTCTCGGGTGCGCG
GTGTTTTTCCACGTGCCTCACTCTCTCGTCCTCGCCCGAGATCAAGCGTT
TCTTATGAAGAGTCAGCGGGGGTTGATGTAACTGCGATTCAGTCCGGAAA
GAACGATGCCTCTTGCTGGACACCTGTGCTGAAAACGTCCCTCACACTCA
GCTGGCTCTCTAGCTCAGCCGACTTGCTTTGGATACTCGTCTCATCCTGC
GCTCGCTTTGAGAATTATCGTGTTTGCACGTACGCAGCGTACGCGCGGCT
TGTGGTGCGCACTCGCCTCTTCCCCGAGCTTCTTCTGTTCTCGGTAGACG
CGCTAAAAGGTGGCCGGATAGAGGAAATGTAGCTGGTGACACAGAAATGA
GAGCATGAACGCGCCGCCATTTTTGCCATCCCCCCTGGCGGCATTCGCCA
CTTTAAGGATTAGGATGTGTGGCGTCGTCGCCGGTTTATGCTGATAGGTC
GAAGTCTCAACGTATCTCGTCGATCTATCATACGAAGTTCGAACCTTCTC
TCACAGTTGATCCCTCCACTTGATCCGGTACTCAACCGCATCGTCCGGCG
AGGGCGTGTTCGTACTGCCGCGCGATAGGTGGCAGTGTATGCGCGAAGAC
AACTTCCAAGCAAAGATAGATCGTGACGATTCTCAATGAACTGAAGATGA
AACTGGGCTCACAGGCCATTTTCTGCACGTCCAATCTCCGCCTCCGTTCG
AAATTTTCGCCGAATACCGGTCCGCCTTGGAACATCCGTCCTCGCCCACT
CACCCTCCCCCACCCCTCTTCGCCACCCCTGCTTCATCCTGTGTTTAATA
ATACTTTTAGGAAGCACAATCAAGGACATGAAGATTAAGACCGGGTGCAA
CATGTGGGTGGACCAGCGAGCGCTCAAGCTCACAATCACCGGCCCGGACC
TGGCTTGCGTGGAGCACGCCGCCAAGTCTGTGGACGCATACGTGGCCGCT
GCGCCCATCAAAGCCGGCGCAGTTGAGGCTGCGGTGACCAAGACCCTCGA
TTGCCCGCCGCAGCTGCTCGATGACCTCGGCGACCGCACCACGATCGCCC
GCATCGTCAAGGAGACGCACGCGCAAGTGGTGGTGAACAAGAAGATCGGT
CGCATCATCGTGCGCGGAGACGTCCGCTCCGTCGAGCTCGCCTCTGCGAG
CGTTCAGGTCATGATCACCAACGCGTTGAACGGCAACTACGGCCTCGACC
TCAGGGTCAACACCCCCGATAGCCACGGCTCCTACGGCGGCGGCGGGTAC
TTCCCGGACGGCTCCATCAGCAACCGCCGCAGCGGCGGCGGCGGCGGTGC
GTCGCCGGGGATGGGCATGCACCACATGATGCCCCCGTCGTCTAGCGGTG
AGTCCCACACGTCAGCCCCCCACTTTCGCGACGACAACCACCACCGCCCC
CGGTCGGCCGTCACGCCGGAGTTTCGCCACCTAGCCCCATGGCAGCAGGA
GCAGCAGCTGCTGGAGCTCAAGGGGGACCTCTCCTGCCAGCAGCAGCAGC
CGCTCCACCGCGGCCACCAGCATCACCACCAGCACCACCACGGGCGGGGA
GGGGGCTCCGACTCGGACGAGTCCGAGATCGAGACGGTGTCCCTCGTATC
CATGGGCGCCCGCACCCCAGTTAGCTCCACCGCCGGATCCCCTCGCGTGG
CGGCGTCATACACCACGAGCCCGGCTCTGTCGGCGATGGCGTCTACCCCT
ATCGGCGACTGGTCTCTATTCTCGGGGGGCTTCGGCCTGGGCGTGGCCGC
CCTCGAGGGAGAGTCGTCGTCGCGCTCGAGCACGCCGACCGCGTCCATTA
CCACGCGCGTTCACTTCCCCGAGGGTCTCCATGCACTCGGCGAGGGCGGC
GACGACAGCATCAGCGGCGGTAGCGACGACGGTCGGGCCTCCGCCGCGCC
GATCGAGGGAGCGACGGGGTTACTGTCTCCGTCCACCCGGGCAGCGTCCG
CGCCCAACGAGGCGTCCCTCTCCGCCGCCGCCCATGGGAGAGGCAAGCCG
ATGGGGTCGCGTGCACCCCCACCCTCTCCGGCGTCCGCGGCCGGCGGCGA
CATGTCTCACAGGCCGCGGAGCCTCCCGGTCCCTGAGGCGCGCGTGTTGA
GCCTGCTGGAGGGCGAGGAGGCCGACGATGACGACCAGGAGGACGCAGAG
ACGCGATCTGTGGCGGCGGGGGGCGACGGGGCGCAGGACGTCGCGGAGAA
GGTCGCTCGCCTCGGGAAGCTGCTCCAGGCGATGGGGCTCGGCAAGTACT
GCGAGAAGTTCGCCAACAACGAAGTGGACCTGGAGGCGCTGGGCCTCATG
AGCGAGGGCGACCTCGCGGACATTGGCATCCCCAAGGGCCCTCGCCTGAA
GATCCTGAACGCGGTTGGCGCCCGCGCGGGGCCGCGGCCAACCACCCCCC
CGCCGTCTGAAGCGTGGATTGTCCTGGACAAAAGTTTCTCAAGAAGCTCG
AACAGTGCAAGAGGTGGGTTGGAGGTGGGTTACAGGGAAAGATTCCGCGC
ACTACCCTCCAACAAGTCAAGTGTTTAATCGTCGGGCTGACCGCCGGGTC
GGCCGTTGCTAATCATCAAGTTCGGTTCGTCGTGGTCTTATGGGTGGTTG
CGTGGTGTATTTTTTTCTTTATTTGCAGTGTTAGAGAAGTGTCGGTCGAA
CGAGTTGTGCCCCCCGTCATTTCTCGCTGATGGGGCGAATGCGATGAGCG
CAAAGGCAGGGAGGGTGCTTAAGCTTCCGTGACGCAACCCCTcCCCTCGC
AGGCAAGTTTGCGCCAGATGACGTAGCACCGGGAGAAAAACGATACACGT
GAGGAAAAAGAGGAGCGGAGCTGAGATCAGAGAATGTTGGGTTTAACGGT
TTgGGGAGAGAAATAAACACGGAGGAAAAACAGGTGGGAACGCCTTTGAC
GTTCCCGAACAACCCGGGCGCCTTTAGTAGTCGAATATCACCTCGCATTA
TGTTTACTTTGTTTTTTTTTAGGAGAGAGGAAAGGTGCCAGATCAGGTCA
TGTCGTGTCGTTGCTGTCTC back to topCoding sequence (CDS) from alignment at P-fluviatile_contig14:1413856..1418975+ >mRNA_P-fluviatile_contig14.2159.1 ID=mRNA_P-fluviatile_contig14.2159.1|Name=mRNA_P-fluviatile_contig14.2159.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4242bp|location=Sequence derived from alignment at P-fluviatile_contig14:1413856..1418975+ (Porterinema fluviatile SAG_2381) ATGTCGCCGATTTATCCACAGCACCAGATCGTAGATAGCCACCACATGGC CCACGCGGCGGCCTGGGACGGCAGCAGCAGGCAGCCACGCCCGAGCGCGC CCTACGCTCATCAGCACCAGCAGCACCAGCAGGACCAGCACCAATGGCCC GTACAAGGACCGCTCCACATCAACAACCCGGCGGCGGCGGGGATGGTCCG CGATGACGGATTCGCTGCTGCTCCGCCGATGCAGCACCCGAGTCTTCCCG TTTCTCGCCACCACCTTCACGCCACAAGCCGGGATGTCCTCAGCGATGGA TCCTTTATGGGGCGAGGCTACAGCATCAAGCGGTGCCAGGGATTCGTGAG GTGTGACATGGACATTGACGCTGAGGTTGTCGGATGGGTCATCGGAAAAA ATGATGTCGCCGATTTATCCACAGCACCAGATCGTAGATAGCCACCACAT GGCCCACGCGGCGGCCTGGGACGGCAGCAGCAGGCAGCCACGCCCGAGCG CGCCCTACGCTCATCAGCACCAGCAGCACCAGCAGGACCAGCACCAATGG CCCGTACAAGGACCGCTCCACATCAACAACCCGGCGGCGGCGGGGATGGT CCGCGATGACGGATTCGCTGCTGCTCCGCCGATGCAGCACCCGAGTCTTC CCGTTTCTCGCCACCACCTTCACGCCACAAGCCGGGATGTCCTCAGCGAT GGATCCTTTATGGGGCGAGGCTACAGCATCAAGCGGTGCCAGGGATTCGT GAGGTGTGACATGGACATTGACGCTGAGGTTGTCGGATGGGTCATCGGAA AAAATGGAAGCACAATCAAGGACATGAAGATTAAGACCGGGTGCAACATG TGGGTGGACCAGCGAGCGCTCAAGCTCACAATCACCGGCCCGGACCTGGC TTGCGTGGAGCACGCCGCCAAGTCTGTGGACGCATACGTGGCCGCTGCGC CCATCAAAGCCGGCGCAGTTGAGGCTGCGGTGACCAAGACCCTCGATTGC CCGCCGCAGCTGCTCGATGACCTCGGCGACCGCACCACGATCGCCCGCAT CGTCAAGGAGACGCACGCGCAAGTGGTGGTGAACAAGAAGATCGGTCGCA TCATCGTGCGCGGAGACGTCCGCTCCGTCGAGCTCGCCTCTGCGAGCGTT CAGGTCATGATCACCAACGCGTTGAACGGCAACTACGGCCTCGACCTCAG GGTCAACACCCCCGATAGCCACGGCTCCTACGGCGGCGGCGGGTACTTCC CGGACGGCTCCATCAGCAACCGCCGCAGCGGCGGCGGCGGCGGTGCGTCG CCGGGGATGGGCATGCACCACATGATGCCCCCGTCGTCTAGCGGTGAGTC CCACACGTCAGCCCCCCACTTTCGCGACGACAACCACCACCGCCCCCGGT CGGCCGTCACGCCGGAGTTTCGCCACCTAGCCCCATGGCAGCAGGAGCAG CAGCTGCTGGAGCTCAAGGGGGACCTCTCCTGCCAGCAGCAGCAGCCGCT CCACCGCGGCCACCAGCATCACCACCAGCACCACCACGGGCGGGGAGGGG GCTCCGACTCGGACGAGTCCGAGATCGAGACGGTGTCCCTCGTATCCATG GGCGCCCGCACCCCAGTTAGCTCCACCGCCGGATCCCCTCGCGTGGCGGC GTCATACACCACGAGCCCGGCTCTGTCGGCGATGGCGTCTACCCCTATCG GCGACTGGTCTCTATTCTCGGGGGGCTTCGGCCTGGGCGTGGCCGCCCTC GAGGGAGAGTCGTCGTCGCGCTCGAGCACGCCGACCGCGTCCATTACCAC GCGCGTTCACTTCCCCGAGGGTCTCCATGCACTCGGCGAGGGCGGCGACG ACAGCATCAGCGGCGGTAGCGACGACGGTCGGGCCTCCGCCGCGCCGATC GAGGGAGCGACGGGGTTACTGTCTCCGTCCACCCGGGCAGCGTCCGCGCC CAACGAGGCGTCCCTCTCCGCCGCCGCCCATGGGAGAGGCAAGCCGATGG GGTCGCGTGCACCCCCACCCTCTCCGGCGTCCGCGGCCGGCGGCGACATG TCTCACAGGCCGCGGAGCCTCCCGGTCCCTGAGGCGCGCGTGTTGAGCCT GCTGGAGGGCGAGGAGGCCGACGATGACGACCAGGAGGACGCAGAGACGC GATCTGTGGCGGCGGGGGGCGACGGGGCGCAGGACGTCGCGGAGAAGGTC GCTCGCCTCGGGAAGCTGCTCCAGGCGATGGGGCTCGGCAAGTACTGCGA GAAGTTCGCCAACAACGAAGTGGACCTGGAGGCGCTGGGCCTCATGAGCG AGGGCGACCTCGCGGACATTGGCATCCCCAAGGGCCCTCGCCTGAAGATC CTGAACGCGGTTGGCGCCCGCGCGGGGCCGCGGCCAACCACCCCCCCGCC GTCTGAAGCGTGGATTGTCCTGGACAAAAGTTTCTCAAGAAGCTCGAACA GTGCAAGAGGTGGGTTGGAGGTGGGTTACAGGGAAAGATTCCGCGCACTA CCCTCCAACAAGTCAAGTGTTTAAGAAGCACAATCAAGGACATGAAGATT AAGACCGGGTGCAACATGTGGGTGGACCAGCGAGCGCTCAAGCTCACAAT CACCGGCCCGGACCTGGCTTGCGTGGAGCACGCCGCCAAGTCTGTGGACG CATACGTGGCCGCTGCGCCCATCAAAGCCGGCGCAGTTGAGGCTGCGGTG ACCAAGACCCTCGATTGCCCGCCGCAGCTGCTCGATGACCTCGGCGACCG CACCACGATCGCCCGCATCGTCAAGGAGACGCACGCGCAAGTGGTGGTGA ACAAGAAGATCGGTCGCATCATCGTGCGCGGAGACGTCCGCTCCGTCGAG CTCGCCTCTGCGAGCGTTCAGGTCATGATCACCAACGCGTTGAACGGCAA CTACGGCCTCGACCTCAGGGTCAACACCCCCGATAGCCACGGCTCCTACG GCGGCGGCGGGTACTTCCCGGACGGCTCCATCAGCAACCGCCGCAGCGGC GGCGGCGGCGGTGCGTCGCCGGGGATGGGCATGCACCACATGATGCCCCC GTCGTCTAGCGGTGAGTCCCACACGTCAGCCCCCCACTTTCGCGACGACA ACCACCACCGCCCCCGGTCGGCCGTCACGCCGGAGTTTCGCCACCTAGCC CCATGGCAGCAGGAGCAGCAGCTGCTGGAGCTCAAGGGGGACCTCTCCTG CCAGCAGCAGCAGCCGCTCCACCGCGGCCACCAGCATCACCACCAGCACC ACCACGGGCGGGGAGGGGGCTCCGACTCGGACGAGTCCGAGATCGAGACG GTGTCCCTCGTATCCATGGGCGCCCGCACCCCAGTTAGCTCCACCGCCGG ATCCCCTCGCGTGGCGGCGTCATACACCACGAGCCCGGCTCTGTCGGCGA TGGCGTCTACCCCTATCGGCGACTGGTCTCTATTCTCGGGGGGCTTCGGC CTGGGCGTGGCCGCCCTCGAGGGAGAGTCGTCGTCGCGCTCGAGCACGCC GACCGCGTCCATTACCACGCGCGTTCACTTCCCCGAGGGTCTCCATGCAC TCGGCGAGGGCGGCGACGACAGCATCAGCGGCGGTAGCGACGACGGTCGG GCCTCCGCCGCGCCGATCGAGGGAGCGACGGGGTTACTGTCTCCGTCCAC CCGGGCAGCGTCCGCGCCCAACGAGGCGTCCCTCTCCGCCGCCGCCCATG GGAGAGGCAAGCCGATGGGGTCGCGTGCACCCCCACCCTCTCCGGCGTCC GCGGCCGGCGGCGACATGTCTCACAGGCCGCGGAGCCTCCCGGTCCCTGA GGCGCGCGTGTTGAGCCTGCTGGAGGGCGAGGAGGCCGACGATGACGACC AGGAGGACGCAGAGACGCGATCTGTGGCGGCGGGGGGCGACGGGGCGCAG GACGTCGCGGAGAAGGTCGCTCGCCTCGGGAAGCTGCTCCAGGCGATGGG GCTCGGCAAGTACTGCGAGAAGTTCGCCAACAACGAAGTGGACCTGGAGG CGCTGGGCCTCATGAGCGAGGGCGACCTCGCGGACATTGGCATCCCCAAG GGCCCTCGCCTGAAGATCCTGAACGCGGTTGGCGCCCGCGCGGGGCCGCG GCCAACCACCCCCCCGCCGTCTGAAGCGTGGATTGTCCTGGACAAAAGTT TCTCAAGAAGCTCGAACAGTGCAAGAGGTGGGTTGGAGGTGGGTTACAGG GAAAGATTCCGCGCACTACCCTCCAACAAGTCAAGTGTTTAA back to top
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