mRNA_P-fluviatile_contig14.2140.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.2140.1
Unique NamemRNA_P-fluviatile_contig14.2140.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig14.2140.1 vs. uniprot
Match: D7FQC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQC6_ECTSI)

HSP 1 Score: 527 bits (1357), Expect = 3.730e-176
Identity = 376/708 (53.11%), Postives = 445/708 (62.85%), Query Frame = 1
Query:   10 AGSATSCDPFLVKESLAALARIGFGKREARLGPHRYHGVAARTRLSVAGKRSMATTSQHRYQHHKERVTISQVDDLADIAREIDGFTKAGLRIPVAVWEKYDRINKRHKKHEDMLSIAAKTRSKNNRQRASKKAQGQEL--------LARINKPTPEVATS-----SSSSSCRNQSVAKQTRTSPLSTVSSHERSSLPTASNRQTRRFSASAPFQGR-RCTFGTGRGGKEA--FETLTRSASQASAASPGGGPCAS-WGQQERDKLNEIYWELGRPPRRGAAAERELFSRYTQRYCMVFPHRSPAEVVERLKLMFRYNSMKEPNEREYWLGLNARRRLF-LPRQ--GSAAAHTSGYVNHSAEPATATKSRRTVNVSVVESEPKESVGFKRSLSAAHKPHSAGLGEQDQASLPKDGSGGGTLAGGDGVGAGGSEWLSSAAASCAADAK-VASLPFSSSRRPRAGLRERGTAF-PFYDPVRPNSPAWGFGEAPPLR--SSGAASHGEESRGGGRSRGASGGAGGLH---------LYDDGNGGGVNGSVGDDDGRPEETELLDYTSLGPQIISSRASSPAFAFSRDGLGTN--SGFQAHKTPEPGPGSFRPNLSATSTHPGVRCGVIMGGRTSRGIEGGGVSEGGSSGAXXXXXXXXXXXXXXXXEXXSASRPSPGPGQYSAWDAIGRQILSTRPSSPVVTFAAGNWELR 2028
            AGS    DPFL KESL+AL R+GFGKREARLGPHRYHGVAARTRLSVAGK SM TTS HR+QHHKERVTI+QV+DLA+IAREID FT AG RIPVAVWEKYDRINKRHKKHEDM++IAA+ R K  R+   ++ QGQE            ++ P  +  T+     SS+ + R+  V+  T +S   T  S E S       R  +R +A +PFQG  RCTFG+GRG +EA   E L R  + AS A    GP +S WG QERDKLNEIYW+LGRPPRRG  AERE F RYTQR+C++FP RSPAEV+ RLKLMFRYN++KEPNERE+WL LNA+R  F  P+Q   +AA+ T    + +  P   T+ R++++ S + SEP+        L    +P     G +++    +                             AA+AK  AS+  S SRR RA LR  G    PFYDPVRPNSPAWGFGEAPP+   SS   S G                             L D+ +  GV     DD G  EETELLDYTSLG Q ISSRA+SPAF F+RDGLG+   S FQA K PEPGPGSFRPNLSATSTHPGVRCGV+M                     XXXXXXXXXXXXXXX    +++RPSPGPGQY AWD IGRQILSTRPSSPVVTFA+G+W+LR
Sbjct:    5 AGSTMEFDPFLGKESLSALGRMGFGKREARLGPHRYHGVAARTRLSVAGKSSMVTTSHHRHQHHKERVTINQVNDLAEIAREIDSFTTAGKRIPVAVWEKYDRINKRHKKHEDMMAIAAEARKKMKRRTRKREEQGQEAGQGCTADNKKDLDGPDQKEGTAFSTDKSSTGTRRHHPVSNNTPSSSSFTADSTELSL-----ERMPKRHTAPSPFQGGGRCTFGSGRGEEEADALEKLARREAHASTAKSRAGPSSSSWGPQERDKLNEIYWDLGRPPRRGVHAEREHFFRYTQRHCLLFPRRSPAEVIARLKLMFRYNTLKEPNEREHWLKLNAKRGFFPQPQQKANAAASSTRNDTSRAVMPTATTEPRQSLDFSSLASEPEHPTAT-NGLQKWPRP-----GSEEEPLFRRXXXXXXXXXXXX-------XXXXXXXXXYAAEAKRTASVASSPSRRLRASLRAGGAPVSPFYDPVRPNSPAWGFGEAPPVSPCSSRPCSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDDNAHAEGV-----DDGGGHEETELLDYTSLGLQTISSRATSPAFGFARDGLGSENLSMFQADKKPEPGPGSFRPNLSATSTHPGVRCGVLMXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXGVGETSTRPSPGPGQYMAWDGIGRQILSTRPSSPVVTFASGDWDLR 682          
BLAST of mRNA_P-fluviatile_contig14.2140.1 vs. uniprot
Match: A0A6H5JI11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI11_9PHAE)

HSP 1 Score: 362 bits (928), Expect = 1.180e-112
Identity = 317/713 (44.46%), Postives = 381/713 (53.44%), Query Frame = 1
Query:   31 DPFLVKESLAALARIGFGKREARLGPHRYHGVAARTRLSVAGKRSMATTSQHRYQHHKERVTISQVDDLADIAREIDGFTKAGLRIPVAVWEKYDRINKRHKKHEDMLSIAAKTRSKNNRQRASKKAQGQELLARINKPTPEVATSSSSSSCRNQSVAKQTRTSPLSTVSSHERSSLPTASN------------RQTRRFSASAPFQGR-RCTFGTGRG--GKEAFETLTRSASQASAASPGGGPCAS-WGQQERDKLNEIYWELGRPPRRGAAAERELFSRYTQRYCMVFPHRSPAEVV---ERLKLMFRYNSMKEPNEREYWLGLNARRRLF-LPRQ--GSAAAHTSGYVNHSAEPATATKSRRTVNVSVVESEPKESV---GFKRSLSAAHKPHSAGLGEQDQASLPKDGSGGGTLAGGDGVGAGGSEWLSSAAASCAADAK-VASLPFSSSRRPRAGLRERGTAF-PFYDPVRPNSPAWGFGEAPPLRSSGAASHGEESRGGGRSRGASGGAGGLH------------------LYDDGNGGGVNGSVGDDDGRPEETELLDYTSLGPQIISSRASSPAFAFSRDGLGTN--SGFQAHKTPEPGPGSFRPNLSATSTHPGVRCGVIMGGRTSRGIEGGGVSEGGSSGAXXXXXXXXXXXXXXXXEXXSASRPSPGPGQYSAWDAIGRQILSTRPSSPVVTFAAGNWELR 2028
            + FL KESLAAL R+GFGKREARLGPHRYHGVAARTRLSVAGK                      V+DLA+I REID FT AG RIPVAVWEKYDRINKRHKKH+DM++IAA+ R K  R+   ++ QGQ         + +    S     + + +A  T  S       H  S+ P++S+            R  ++ +A +PFQG  RCTFG+GRG  G +A ETL R  + AS A    GP +S WG QERDKLNEI              E +  +   QR  + FP+ S         RL  +     ++EPNERE+WL LNA+R  F  P+Q   +AA  T    +    PA  T+ R+ ++ S + SEP+      G ++ L A  +                                               +AK  A L  S SRR  A LR  GT   PF+DPVRPNSPAWGFGEAPP+           SR G                                L D+ +  GV     DD G  EETELLDYTSLG Q ISSRA+SPAF F+RDGLG+   S FQA K PEPGPGSF PNLS+TSTHPGVRCGV+MGGR                  XXXXXXXXXXXXXXXX   S++RPSPGPGQY  WDAIGRQILSTRPSSPVVTFA+G+W+LR
Sbjct:    4 ESFLGKESLAALGRMGFGKREARLGPHRYHGVAARTRLSVAGK----------------------VNDLAEITREIDSFTSAGKRIPVAVWEKYDRINKRHKKHDDMMAIAAEARIKIKRRTRKREEQGQAAGQGCTADSKKNLDGSD----QKEGIAFSTDKSSTGIRRHHPLSNNPSSSSSFTADSTELSLERMPKQRTAPSPFQGGGRCTFGSGRGEEGGDALETLARREAHASTAKSRAGPSSSSWGPQERDKLNEI-------------CESDCSN---QR--LSFPNTSSCSYCCTSSRLCAV-----VQEPNEREHWLKLNAKRGFFPQPQQKANAAAGSTRNDTSRVVMPAATTEPRQPLDFSSLASEPQHPAATNGLQKWLPAGSEEEPLFRXXXXXXXXXXXXX----------------XXXXXXXXXYTTEAKRTAFLESSPSRRLHASLRASGTPVSPFHDPVRPNSPAWGFGEAPPVSP-------RSSRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDDNAHAEGV-----DDGGGHEETELLDYTSLGVQTISSRATSPAFGFARDGLGSENLSMFQADKRPEPGPGSFCPNLSSTSTHPGVRCGVLMGGRXXX------XXXXXXXXXXXXXXXXXXXXXXXXXVGGSSTRPSPGPGQYMVWDAIGRQILSTRPSSPVVTFASGDWDLR 633          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2140.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQC6_ECTSI3.730e-17653.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JI11_9PHAE1.180e-11244.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:1258636..1262669 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-01_006610.1
Exons5
Model size2031
Cds size2031
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2140.1prot_P-fluviatile_contig14.2140.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 1258636..1262669 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815610.8152156-CDS-P-fluviatile_contig14:1258635..12587941622815610.8152156-CDS-P-fluviatile_contig14:1258635..1258794Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1258636..1258794 +
1693562409.2320058-CDS-P-fluviatile_contig14:1258635..12587941693562409.2320058-CDS-P-fluviatile_contig14:1258635..1258794Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1258636..1258794 +
1622815610.841934-CDS-P-fluviatile_contig14:1259015..12590811622815610.841934-CDS-P-fluviatile_contig14:1259015..1259081Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1259016..1259081 +
1693562409.2413955-CDS-P-fluviatile_contig14:1259015..12590811693562409.2413955-CDS-P-fluviatile_contig14:1259015..1259081Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1259016..1259081 +
1622815610.8613675-CDS-P-fluviatile_contig14:1260073..12606141622815610.8613675-CDS-P-fluviatile_contig14:1260073..1260614Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1260074..1260614 +
1693562409.2507362-CDS-P-fluviatile_contig14:1260073..12606141693562409.2507362-CDS-P-fluviatile_contig14:1260073..1260614Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1260074..1260614 +
1622815610.8784711-CDS-P-fluviatile_contig14:1260892..12610471622815610.8784711-CDS-P-fluviatile_contig14:1260892..1261047Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1260893..1261047 +
1693562409.2655983-CDS-P-fluviatile_contig14:1260892..12610471693562409.2655983-CDS-P-fluviatile_contig14:1260892..1261047Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1260893..1261047 +
1622815610.8947558-CDS-P-fluviatile_contig14:1261559..12626691622815610.8947558-CDS-P-fluviatile_contig14:1261559..1262669Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1261560..1262669 +
1693562409.273354-CDS-P-fluviatile_contig14:1261559..12626691693562409.273354-CDS-P-fluviatile_contig14:1261559..1262669Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 1261560..1262669 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.2140.1

>prot_P-fluviatile_contig14.2140.1 ID=prot_P-fluviatile_contig14.2140.1|Name=mRNA_P-fluviatile_contig14.2140.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=677bp
MVQAGSATSCDPFLVKESLAALARIGFGKREARLGPHRYHGVAARTRLSV
AGKRSMATTSQHRYQHHKERVTISQVDDLADIAREIDGFTKAGLRIPVAV
WEKYDRINKRHKKHEDMLSIAAKTRSKNNRQRASKKAQGQELLARINKPT
PEVATSSSSSSCRNQSVAKQTRTSPLSTVSSHERSSLPTASNRQTRRFSA
SAPFQGRRCTFGTGRGGKEAFETLTRSASQASAASPGGGPCASWGQQERD
KLNEIYWELGRPPRRGAAAERELFSRYTQRYCMVFPHRSPAEVVERLKLM
FRYNSMKEPNEREYWLGLNARRRLFLPRQGSAAAHTSGYVNHSAEPATAT
KSRRTVNVSVVESEPKESVGFKRSLSAAHKPHSAGLGEQDQASLPKDGSG
GGTLAGGDGVGAGGSEWLSSAAASCAADAKVASLPFSSSRRPRAGLRERG
TAFPFYDPVRPNSPAWGFGEAPPLRSSGAASHGEESRGGGRSRGASGGAG
GLHLYDDGNGGGVNGSVGDDDGRPEETELLDYTSLGPQIISSRASSPAFA
FSRDGLGTNSGFQAHKTPEPGPGSFRPNLSATSTHPGVRCGVIMGGRTSR
GIEGGGVSEGGSSGAGSGGGLGGAGGGTSTGEGASASRPSPGPGQYSAWD
AIGRQILSTRPSSPVVTFAAGNWELR*
back to top

mRNA from alignment at P-fluviatile_contig14:1258636..1262669+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.2140.1 ID=mRNA_P-fluviatile_contig14.2140.1|Name=mRNA_P-fluviatile_contig14.2140.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4034bp|location=Sequence derived from alignment at P-fluviatile_contig14:1258636..1262669+ (Porterinema fluviatile SAG_2381)
ATGGTTCAAGCGGGATCTGCGACCAGTTGTGACCCTTTCCTTGTGAAGGA GAGCCTCGCGGCGCTTGCCAGGATTGGCTTCGGCAAACGAGAGGCCCGGC TTGGACCACATCGTTATCACGGGGTTGCCGCGAGGACAAGGCTCTCCGTT GCGGGAAAGGTGGGTGCTCTCCTGGTGTGCACCGCTGAGCGAAATCGAAC GCAAAGGAAGTAAATATCCTGCTCCGTGCCGTCGACGTGAAGTCGATGAA AAATTATGCTGGTGTGGTTCATTTTCAGTGAGAAAACATTTCACACAAAT AGCTGCATGGTAACCGCGCGGGTGGCTTGTGGCTTGTTTCCTAACGCTTC TTTTGATACCCGCTCGTTGATACCCAACAGCGTTCGATGGCGACAACGTC TCAACACCGGTATCAGCATCATAAGGAACGAGTCACGATCAGTCAGGTGA ACACCGATGCGGCTGAAACAACAATGGCCGAAACTACCGTACTCTCGAGC GGCTATTGCGCGAGGCTCAGTGGATTACGAACCATTGGTAATGAGGCCAC TCCTCGAATTTGTTTACTCCTAATCAAATGTAAACACAACTTGTTTAAGC AGGAATAAAAGTGGACGCCACAGTTTAAATCTCAACAGGAGGATTCCTGT GTTACTGAAATATCACCACTTTCTACGGAGAGGTTTTATTTTACACTAGA AGTATTTCAGCACAGCACTACTGCCTGTAGTGAGCGCCATTGTGTTCGTG CAGATGCGATTCAATTTGATAACAAATGAATGCGGCTGGTGAAACGTCAT CTGGTAGAAAGTTCAAGGAAACACTCGAAAAAAGTCATGGGTGTGGCCAC AGGATACATTCTTCCGGCCCGATCTTCCGCCTTTGATGTACCGGCACGCC GTTGCTCTGAGATCAGAAACGATTGGGGCACGGGCAACTAGCGTCTTTGT GCTCCATTCATGCATACATAAGTCCAAGTGCCCAACGATTGTGGGGGGTA GAGTGCCTTTCATACGTCAACCTTGACTGAAAAACACTCTGTATGATTTC CTTCACCTTGTGACGCTATGTATCGGCTCCAGCCTTTCGGTTGTTCAATG CCGGAGTAATAGATTTCACCCGTAATCGTATGTGTGTTACCTTCACATAA AACCCCCTCTCCGCTCACTCCCAGTGCCTCCAAGTGTCTTCCCCTTTTCT GTTGGGGAACGATTCCTTGGTCACAGGCTACAAAAAGATGGTGATCCCCT TTCTGTTTGGATTCCATCTTAAAAAAACAATCGGTCCCAGACTTCTAGCA CCATACGAAACGAAATACATGACAAGACACAAAAACAAAGCAACCCATTA TCCTCCTCTCGATTATGTCGTGGGCGTAGTAGCGTCTATCCATTATGCAT GAAGTTCCGTGACCACTTTGACCACCTTTCAAAACCAGGTTGACGATCTG GCAGATATCGCTCGCGAGATTGATGGTTTCACCAAGGCTGGCCTTCGAAT ACCTGTCGCTGTTTGGGAGAAGTACGACCGCATCAACAAGCGCCACAAGA AGCACGAAGACATGCTTTCGATCGCGGCCAAAACTCGCAGCAAAAACAAT CGGCAAAGAGCATCCAAAAAGGCACAAGGGCAAGAGCTCCTTGCACGAAT CAACAAACCAACTCCAGAGGTGGCAACTAGCAGCAGCAGCAGCAGCTGTA GAAATCAATCTGTGGCAAAACAGACCAGAACGTCGCCGTTGTCGACAGTC AGCAGTCATGAACGCTCATCGCTGCCCACGGCATCTAATAGACAAACTAG GCGATTCTCAGCCTCCGCCCCGTTCCAAGGCAGGCGTTGTACCTTCGGTA CAGGTAGAGGAGGTAAAGAAGCCTTCGAGACACTCACGAGAAGCGCTTCC CAAGCTTCAGCGGCTTCGCCCGGGGGTGGTCCTTGTGCATCGTGGGGACA GCAAGAACGAGACAAACTCAACGAAATTTGTGAGCCGAACAGCTTCAGTG CCGCCTGCAATCGTCTTACCCGTTTGTTCCGTTGAAGTCAAGTCTCATGC TGTGAATGTGGCAGCGGAAAAGTATTTTGAACCTCCACTCTTCAAGATGA GCGGGCGAAATGACGCGCAGGCTTCCTGAACATCAGCACCCACCGTGGAA TATTTCTTTCATCTGGAGCCGCTTGGTTCAACCTGTACCTGGTTCTAGAC TACCCTACTCTCATAAATATTCTCGTGAAAATTTGTGCAAATCCTCCACT TGCACAGATTGGGAACTTGGGCGACCTCCGCGGCGTGGCGCTGCCGCCGA ACGCGAGCTTTTTTCCCGCTACACGCAAAGGTATTGCATGGTCTTCCCTC ACCGATCCCCTGCTGAGGTTGTGGAAAGGCTCAAGCTTATGTTCCGCTAC AATTCAATGAAGGTAAAATATTAATACGAAATCAGCAACAGGAAAGCAGA GCAGCAGCAACAAGTGCCAACTTGTGTGATGACTTATCGCGTACTCAATT CCGCGAGATTAAAACGACGTCAAATTTTCAATAATTTGCTCCGTAACAAG TATGGCTCTGAAAAGGGGGAGAACGTAGACCCATGTCAGGCGGGGGTTCC TGGTTTGATGTCGCTTTTTCTTCCCTCTAAGACGGTTGAACGGTGTCAGG ACAGAATTGGTCATTCTCATTTCGATAAAGTCGCGGTGAACAATATTACA GGTACGGATACCACAGGTCCCGAGGGTTGGAATAGCCAGGGATATTTGTG AATCGAGTTTTCGAGGTGGCGAAATTTCTTAATTGTCCGTTGGTCCGGCG AACTTGTTCAATGTTAGCAGTTCGCCCAGGTGTCATACAGGATGCAACCG ATCATGAACACCGCTGCTTCACGCTTGTCATGACGCGAACAAATCCTCCG CTTCGGCATTTACCTTTTGTGCAGGAGCCGAATGAGCGAGAGTACTGGCT TGGGTTAAACGCAAGGCGACGATTATTTCTGCCGCGGCAAGGGAGTGCGG CTGCGCATACAAGCGGTTACGTCAACCATTCCGCTGAACCAGCCACCGCT ACAAAATCTCGACGAACGGTCAACGTTTCCGTCGTTGAGTCGGAGCCCAA GGAGTCGGTGGGTTTTAAAAGAAGTCTCTCAGCGGCTCACAAGCCACATT CTGCAGGTTTGGGAGAGCAGGACCAAGCCAGTCTTCCCAAAGATGGCAGT GGCGGTGGAACGCTTGCTGGTGGTGATGGTGTTGGTGCTGGCGGTAGTGA ATGGTTGTCATCCGCCGCAGCGTCGTGCGCTGCTGACGCAAAAGTCGCCT CTCTTCCGTTTTCCTCGTCTCGACGGCCGCGGGCTGGCCTTCGTGAAAGA GGCACCGCTTTTCCCTTCTACGATCCCGTCCGCCCAAATTCTCCCGCCTG GGGGTTTGGGGAAGCGCCGCCACTCCGCTCCTCCGGGGCCGCCTCGCACG GCGAGGAAAGTCGCGGAGGCGGCAGGTCTCGGGGTGCGTCGGGGGGGGCG GGAGGCCTGCACCTTTACGACGACGGCAACGGTGGCGGCGTCAACGGAAG CGTCGGTGACGATGACGGCAGACCAGAAGAAACGGAGCTGCTCGACTACA CCTCGCTGGGCCCACAGATAATCTCCAGCCGGGCAAGCTCGCCGGCGTTT GCTTTTTCCAGGGACGGCCTCGGCACGAACTCGGGGTTTCAGGCGCATAA GACACCAGAGCCGGGTCCCGGGAGCTTCCGGCCGAACCTCTCGGCGACAA GCACACACCCGGGCGTGCGTTGCGGGGTGATAATGGGTGGACGCACATCT CGTGGCATCGAGGGCGGGGGCGTGAGTGAGGGCGGCAGCAGTGGGGCCGG CAGCGGTGGGGGCTTAGGTGGTGCGGGAGGTGGTACATCGACGGGAGAAG GTGCGTCGGCCTCAAGACCAAGCCCAGGGCCAGGGCAATACTCGGCGTGG GACGCGATCGGGAGACAGATTTTATCGACAAGACCGTCTTCGCCGGTCGT GACATTTGCTGCCGGCAATTGGGAGTTGCGTTGA
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig14:1258636..1262669+

>mRNA_P-fluviatile_contig14.2140.1 ID=mRNA_P-fluviatile_contig14.2140.1|Name=mRNA_P-fluviatile_contig14.2140.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4062bp|location=Sequence derived from alignment at P-fluviatile_contig14:1258636..1262669+ (Porterinema fluviatile SAG_2381)
ATGGTTCAAGCGGGATCTGCGACCAGTTGTGACCCTTTCCTTGTGAAGGA
GAGCCTCGCGGCGCTTGCCAGGATTGGCTTCGGCAAACGAGAGGCCCGGC
TTGGACCACATCGTTATCACGGGGTTGCCGCGAGGACAAGGCTCTCCGTT
GCGGGAAAGATGGTTCAAGCGGGATCTGCGACCAGTTGTGACCCTTTCCT
TGTGAAGGAGAGCCTCGCGGCGCTTGCCAGGATTGGCTTCGGCAAACGAG
AGGCCCGGCTTGGACCACATCGTTATCACGGGGTTGCCGCGAGGACAAGG
CTCTCCGTTGCGGGAAAGCGTTCGATGGCGACAACGTCTCAACACCGGTA
TCAGCATCATAAGGAACGAGTCACGATCAGTCAGCGTTCGATGGCGACAA
CGTCTCAACACCGGTATCAGCATCATAAGGAACGAGTCACGATCAGTCAG
GTTGACGATCTGGCAGATATCGCTCGCGAGATTGATGGTTTCACCAAGGC
TGGCCTTCGAATACCTGTCGCTGTTTGGGAGAAGTACGACCGCATCAACA
AGCGCCACAAGAAGCACGAAGACATGCTTTCGATCGCGGCCAAAACTCGC
AGCAAAAACAATCGGCAAAGAGCATCCAAAAAGGCACAAGGGCAAGAGCT
CCTTGCACGAATCAACAAACCAACTCCAGAGGTGGCAACTAGCAGCAGCA
GCAGCAGCTGTAGAAATCAATCTGTGGCAAAACAGACCAGAACGTCGCCG
TTGTCGACAGTCAGCAGTCATGAACGCTCATCGCTGCCCACGGCATCTAA
TAGACAAACTAGGCGATTCTCAGCCTCCGCCCCGTTCCAAGGCAGGCGTT
GTACCTTCGGTACAGGTAGAGGAGGTAAAGAAGCCTTCGAGACACTCACG
AGAAGCGCTTCCCAAGCTTCAGCGGCTTCGCCCGGGGGTGGTCCTTGTGC
ATCGTGGGGACAGCAAGAACGAGACAAACTCAACGAAATTTGTTGACGAT
CTGGCAGATATCGCTCGCGAGATTGATGGTTTCACCAAGGCTGGCCTTCG
AATACCTGTCGCTGTTTGGGAGAAGTACGACCGCATCAACAAGCGCCACA
AGAAGCACGAAGACATGCTTTCGATCGCGGCCAAAACTCGCAGCAAAAAC
AATCGGCAAAGAGCATCCAAAAAGGCACAAGGGCAAGAGCTCCTTGCACG
AATCAACAAACCAACTCCAGAGGTGGCAACTAGCAGCAGCAGCAGCAGCT
GTAGAAATCAATCTGTGGCAAAACAGACCAGAACGTCGCCGTTGTCGACA
GTCAGCAGTCATGAACGCTCATCGCTGCCCACGGCATCTAATAGACAAAC
TAGGCGATTCTCAGCCTCCGCCCCGTTCCAAGGCAGGCGTTGTACCTTCG
GTACAGGTAGAGGAGGTAAAGAAGCCTTCGAGACACTCACGAGAAGCGCT
TCCCAAGCTTCAGCGGCTTCGCCCGGGGGTGGTCCTTGTGCATCGTGGGG
ACAGCAAGAACGAGACAAACTCAACGAAATTTATTGGGAACTTGGGCGAC
CTCCGCGGCGTGGCGCTGCCGCCGAACGCGAGCTTTTTTCCCGCTACACG
CAAAGGTATTGCATGGTCTTCCCTCACCGATCCCCTGCTGAGGTTGTGGA
AAGGCTCAAGCTTATGTTCCGCTACAATTCAATGAAGATTGGGAACTTGG
GCGACCTCCGCGGCGTGGCGCTGCCGCCGAACGCGAGCTTTTTTCCCGCT
ACACGCAAAGGTATTGCATGGTCTTCCCTCACCGATCCCCTGCTGAGGTT
GTGGAAAGGCTCAAGCTTATGTTCCGCTACAATTCAATGAAGGAGCCGAA
TGAGCGAGAGTACTGGCTTGGGTTAAACGCAAGGCGACGATTATTTCTGC
CGCGGCAAGGGAGTGCGGCTGCGCATACAAGCGGTTACGTCAACCATTCC
GCTGAACCAGCCACCGCTACAAAATCTCGACGAACGGTCAACGTTTCCGT
CGTTGAGTCGGAGCCCAAGGAGTCGGTGGGTTTTAAAAGAAGTCTCTCAG
CGGCTCACAAGCCACATTCTGCAGGTTTGGGAGAGCAGGACCAAGCCAGT
CTTCCCAAAGATGGCAGTGGCGGTGGAACGCTTGCTGGTGGTGATGGTGT
TGGTGCTGGCGGTAGTGAATGGTTGTCATCCGCCGCAGCGTCGTGCGCTG
CTGACGCAAAAGTCGCCTCTCTTCCGTTTTCCTCGTCTCGACGGCCGCGG
GCTGGCCTTCGTGAAAGAGGCACCGCTTTTCCCTTCTACGATCCCGTCCG
CCCAAATTCTCCCGCCTGGGGGTTTGGGGAAGCGCCGCCACTCCGCTCCT
CCGGGGCCGCCTCGCACGGCGAGGAAAGTCGCGGAGGCGGCAGGTCTCGG
GGTGCGTCGGGGGGGGCGGGAGGCCTGCACCTTTACGACGACGGCAACGG
TGGCGGCGTCAACGGAAGCGTCGGTGACGATGACGGCAGACCAGAAGAAA
CGGAGCTGCTCGACTACACCTCGCTGGGCCCACAGATAATCTCCAGCCGG
GCAAGCTCGCCGGCGTTTGCTTTTTCCAGGGACGGCCTCGGCACGAACTC
GGGGTTTCAGGCGCATAAGACACCAGAGCCGGGTCCCGGGAGCTTCCGGC
CGAACCTCTCGGCGACAAGCACACACCCGGGCGTGCGTTGCGGGGTGATA
ATGGGTGGACGCACATCTCGTGGCATCGAGGGCGGGGGCGTGAGTGAGGG
CGGCAGCAGTGGGGCCGGCAGCGGTGGGGGCTTAGGTGGTGCGGGAGGTG
GTACATCGACGGGAGAAGGTGCGTCGGCCTCAAGACCAAGCCCAGGGCCA
GGGCAATACTCGGCGTGGGACGCGATCGGGAGACAGATTTTATCGACAAG
ACCGTCTTCGCCGGTCGTGACATTTGCTGCCGGCAATTGGGAGTTGCGTT
GAGAGCCGAATGAGCGAGAGTACTGGCTTGGGTTAAACGCAAGGCGACGA
TTATTTCTGCCGCGGCAAGGGAGTGCGGCTGCGCATACAAGCGGTTACGT
CAACCATTCCGCTGAACCAGCCACCGCTACAAAATCTCGACGAACGGTCA
ACGTTTCCGTCGTTGAGTCGGAGCCCAAGGAGTCGGTGGGTTTTAAAAGA
AGTCTCTCAGCGGCTCACAAGCCACATTCTGCAGGTTTGGGAGAGCAGGA
CCAAGCCAGTCTTCCCAAAGATGGCAGTGGCGGTGGAACGCTTGCTGGTG
GTGATGGTGTTGGTGCTGGCGGTAGTGAATGGTTGTCATCCGCCGCAGCG
TCGTGCGCTGCTGACGCAAAAGTCGCCTCTCTTCCGTTTTCCTCGTCTCG
ACGGCCGCGGGCTGGCCTTCGTGAAAGAGGCACCGCTTTTCCCTTCTACG
ATCCCGTCCGCCCAAATTCTCCCGCCTGGGGGTTTGGGGAAGCGCCGCCA
CTCCGCTCCTCCGGGGCCGCCTCGCACGGCGAGGAAAGTCGCGGAGGCGG
CAGGTCTCGGGGTGCGTCGGGGGGGGCGGGAGGCCTGCACCTTTACGACG
ACGGCAACGGTGGCGGCGTCAACGGAAGCGTCGGTGACGATGACGGCAGA
CCAGAAGAAACGGAGCTGCTCGACTACACCTCGCTGGGCCCACAGATAAT
CTCCAGCCGGGCAAGCTCGCCGGCGTTTGCTTTTTCCAGGGACGGCCTCG
GCACGAACTCGGGGTTTCAGGCGCATAAGACACCAGAGCCGGGTCCCGGG
AGCTTCCGGCCGAACCTCTCGGCGACAAGCACACACCCGGGCGTGCGTTG
CGGGGTGATAATGGGTGGACGCACATCTCGTGGCATCGAGGGCGGGGGCG
TGAGTGAGGGCGGCAGCAGTGGGGCCGGCAGCGGTGGGGGCTTAGGTGGT
GCGGGAGGTGGTACATCGACGGGAGAAGGTGCGTCGGCCTCAAGACCAAG
CCCAGGGCCAGGGCAATACTCGGCGTGGGACGCGATCGGGAGACAGATTT
TATCGACAAGACCGTCTTCGCCGGTCGTGACATTTGCTGCCGGCAATTGG
GAGTTGCGTTGA
back to top