mRNA_P-fluviatile_contig14.2138.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2138.1 vs. uniprot
Match: A0A6H5JL98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL98_9PHAE) HSP 1 Score: 257 bits (656), Expect = 5.820e-79 Identity = 158/328 (48.17%), Postives = 196/328 (59.76%), Query Frame = 2
Query: 11 ENSRQYVAQGAAGLA----GLLCLERPIPTEVLRGLGYLAGVAAPFKIEALRVGEDPG----VDGDDECWSHILTAKFENIQCSDSAGNSEGVDLDGIAAEAEEQLFLTTSEGGRSERGPSVTRITVARDQKLTAAQQQQEQRQLANEAQEAARWLKTDIEHLASLFARQALALAAAKSPSREGPTLLDTRRQLPREEA---VTVKLELLDKGKCPRYHLDKVPIRLICTYVGPSTEWLDAYDKWEMINNRRPPPACNIKISAGREPRSAGPGDVLIFRGQPEEGLVQGS---ALAVAHRSPDTLDGQRRLVLTMDVGDVRASAASAP 952
E+ R VA AG+A GLLCLER IP +++RGL A AAPFK+E LR G G D + E W + A N S +AG + E EE+ + R +G ++ + L + QQQ L EAQ A RWLK DI+ +A +FAR+ L+ P + T ++E VTVKLELL +GKCPR+HLDKVPIRLICTYVGPSTEWLDAYDKWEM NNR PPACN+KIS GRE + A PGDVLIFRG+P+ GL +G A AVAHRSPDT++GQRRL+LTMD G++ A +P
Sbjct: 103 EHPRNGVAAEEAGVARLAAGLLCLERQIPDQIMRGLEEFADNAAPFKVEVLRPGSRRGDSDDADNEGEGWLDKIAASIGNSSSSSNAGGRDN--------EGEERRSENLAR--RRVQGETLQDYESPLNLNLPSLQQQ-----LDVEAQAAVRWLKADIKRVARIFAREISVLS--DEPGETSLLGVATEPSAGKDERTFDVTVKLELLKRGKCPRFHLDKVPIRLICTYVGPSTEWLDAYDKWEMENNRSMPPACNVKISGGREAQRARPGDVLIFRGKPQGGLTKGGGSGAFAVAHRSPDTVEGQRRLLLTMDAGELITKAPVSP 413
BLAST of mRNA_P-fluviatile_contig14.2138.1 vs. uniprot
Match: D7FQC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQC5_ECTSI) HSP 1 Score: 253 bits (645), Expect = 1.840e-78 Identity = 159/323 (49.23%), Postives = 190/323 (58.82%), Query Frame = 2
Query: 11 ENSRQYVAQGAAGL----AGLLCLERPIPTEVLRGLGYLAGVAAPFKIEALRVGEDPG----VDGDDECWSHILTAKFENIQCSDSAGNSEGVDLDGIAAEAEEQLFLTTSEGGRSERGPSVTRITVARDQKLTAAQQQQEQRQLANEAQEAARWLKTDIEHLASLFARQALALAAAKSP-SREGPTLLDTRRQLPREEAVTVKLELLDKGKCPRYHLDKVPIRLICTYVGPSTEWLDAYDKWEMINNRRPPPACNIKISAGREPRSAGPGDVLIFRGQPEEGLVQGS---ALAVAHRSPDTLDGQRRLVLTMDVGDVRASAA 943
E+ R VA AG AGLLCLER IP ++LRGL LA A PFK+E LR G G D + + W L A N S +AG + A E L R +G + KL QQQ L +AQ AARWLK DI+ +A +FAR+ L+ S G R+ R VTVKLELL +GKCPR+HLDKVPIRLICTYVGPSTEWLD YDKWEM NN+ PPACN+KIS GRE R A PGDVLIFRG+P++GL +G A AVAHRSPDT++GQRRL+LTMD G++ + A
Sbjct: 13 EHPRSGVAAEGAGAGRLAAGLLCLERQIPDQILRGLEELADNATPFKVEVLRPGSRRGDSDDADNEGDGWLDNLVASIGNSSSSSNAGGRDN------AGEEPRSENLAR----RRIQGEILQDDASPLHPKLPNLQQQ-----LDVKAQAAARWLKADIKRVARIFAREISVLSDEPGETSLLGIATEPLARKDKRTVDVTVKLELLTRGKCPRFHLDKVPIRLICTYVGPSTEWLDVYDKWEMENNKSMPPACNLKISGGREARRARPGDVLIFRGKPQDGLAKGGGSGAFAVAHRSPDTVEGQRRLLLTMDAGELVTTKA 320
BLAST of mRNA_P-fluviatile_contig14.2138.1 vs. uniprot
Match: A0A2P4ES10_9GAMM (DUF1826 domain-containing protein n=6 Tax=Pseudomonadales TaxID=72274 RepID=A0A2P4ES10_9GAMM) HSP 1 Score: 83.6 bits (205), Expect = 4.040e-15 Identity = 63/168 (37.50%), Postives = 83/168 (49.40%), Query Frame = 2
Query: 449 WLKTDIEHLASLFARQALALAAAKSPSREGPTLLDTRRQLPRE--------EAVTVKLELLDKGKCPRYHLDKVPIRLICTYVGPSTEWLDAYDKWEMINNRRPPPACNI-KISAGREP---RSAGPGDVLIFRGQPEEGLVQGSALAVAHRSPDTLDGQRRLVLTMD 916
WL E LAS A Q A P + GP + D QL E E V V+L +L+K CPR+H D +P+RL+ TY+GP +EWL + RR ++ K REP R G GDV + +G G V + HRSP DGQ+RL+LT+D
Sbjct: 59 WLGIPGETLASELAAQLPA------PGQAGPLVADV--QLLAEATACLFGVERVAVRLRMLEKAMCPRFHCDNLPVRLVTTYLGPGSEWLP-----DSAVERRGLGVPDLGKPDPVREPGAIRQLGCGDVALLKGS---GWVGNEERGIVHRSPALKDGQQRLLLTLD 210
BLAST of mRNA_P-fluviatile_contig14.2138.1 vs. uniprot
Match: A0A8H8XKA1_9PSED (Uncharacterized protein n=1 Tax=Pseudomonas sp. OF001 TaxID=2772300 RepID=A0A8H8XKA1_9PSED) HSP 1 Score: 82.0 bits (201), Expect = 1.470e-14 Identity = 50/124 (40.32%), Postives = 70/124 (56.45%), Query Frame = 2
Query: 545 LLDTRRQLPREEAVTVKLELLDKGKCPRYHLDKVPIRLICTYVGPSTEWLDAYDKWEMINNRRPPPACNIKISAGREPRSAGPGDVLIFRGQPEEGLVQGSALAVAHRSPDTLDGQRRLVLTMD 916
LL+ RR V V+L +LDK CPR+H+D+VP+RL+ TY GP ++WL D + +R P+C A R S PG V + +G+ EG A+ HRSP G+RRL+LT+D
Sbjct: 104 LLEARR-------VGVRLRVLDKAMCPRFHVDRVPLRLVTTYAGPGSQWLAEGD---LPRHRLADPSCAPDEVAVR---SMEPGHVALLKGERWEGNEH---TAIVHRSPMLAAGERRLLLTLD 211
BLAST of mRNA_P-fluviatile_contig14.2138.1 vs. uniprot
Match: UPI00188E7BEE (DUF1826 domain-containing protein n=1 Tax=Methylophilus sp. 13 TaxID=2781018 RepID=UPI00188E7BEE) HSP 1 Score: 81.3 bits (199), Expect = 4.000e-14 Identity = 61/175 (34.86%), Postives = 89/175 (50.86%), Query Frame = 2
Query: 440 AARWLKTDIEHLASL---FARQALALAAAKSPSREG-----PTLLDTRRQLPREEAVTVKLELLDKGKCPRYHLDKVPIRLICTYVGPSTEWLD-AYDKWEMINNRRP--PPACNIKISAG-----REPRSAGPGDVLIFRGQPEEGLVQGSALAVAHRSPDTLDGQRRLVLTMD 916
AAR L + ++ SL A Q AL P RE L+ +L + V ++LE+L K CP++H+D IRL+CTY+GP TEWL+ A+ + +R PP N + AG R R A D+++ +G +G G A+ HRSP +GQ R+VL +D
Sbjct: 59 AARSLAPGLRNVISLQPALAPQLRALPLPAQPGREAFIQELAQLVTVFAELLDCQTVGLRLEVLQKAMCPQFHVDHTGIRLLCTYMGPGTEWLEEAFADRSYLKHRSHLNPPGLNNQQRAGVVLDARGIRQADAFDIVLLKGSQWQGNTVGGAI---HRSPVVPEGQTRVVLALD 230
BLAST of mRNA_P-fluviatile_contig14.2138.1 vs. uniprot
Match: UPI0012656E64 (DUF1826 domain-containing protein n=1 Tax=Pseudomonas sp. SCB32 TaxID=2653853 RepID=UPI0012656E64) HSP 1 Score: 80.1 bits (196), Expect = 6.600e-14 Identity = 40/111 (36.04%), Postives = 64/111 (57.66%), Query Frame = 2
Query: 584 VTVKLELLDKGKCPRYHLDKVPIRLICTYVGPSTEWLDAYDKWEMINNRRPPPACNIKISAGREPRSAGPGDVLIFRGQPEEGLVQGSALAVAHRSPDTLDGQRRLVLTMD 916
+ ++L LD+ CPR+H+D VP+RL+ TY+GP+++WL+ +W M R P + + R GDV +F+G+ G + G + HRS G+RRL+LT+D
Sbjct: 105 IGLRLRSLDRAMCPRFHVDHVPLRLVTTYIGPASQWLE---EWAMARTRLADPTAEPNDAV--QIRQMAAGDVGLFKGEKWAGNLGGG---IVHRSSQPASGERRLLLTLD 207
BLAST of mRNA_P-fluviatile_contig14.2138.1 vs. uniprot
Match: A0A2E2KL00_9GAMM (Succinylglutamate desuccinylase n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A2E2KL00_9GAMM) HSP 1 Score: 79.0 bits (193), Expect = 1.570e-13 Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 2
Query: 578 EAVTVKLELLDKGKCPRYHLDKVPIRLICTYVGPSTEWLDAY--DKWEMINNRRPPPACNIKISAGREP-RSAGPGDVLIFRGQPEEGLVQGSALAVAHRSPDTLDGQRRLVLTMD 916
+ V ++L++LD+ CPR+H DK+ RL+ Y G TEWLD + D+ ++ P + A +E A GDVL+ +G EG G V HRSP L GQ+RLV T+D
Sbjct: 92 DEVGLRLQVLDRAMCPRFHTDKLGCRLVTAYQGAGTEWLDEHQLDRTKLGAGNGGLPDAESGLYADQEQINQASVGDVLLLKG---EGWFGGEGKGVVHRSPAVLSGQKRLVATLD 204
BLAST of mRNA_P-fluviatile_contig14.2138.1 vs. uniprot
Match: A0A1B8UZZ5_9PSED (Uncharacterized protein n=14 Tax=Pseudomonas TaxID=286 RepID=A0A1B8UZZ5_9PSED) HSP 1 Score: 78.6 bits (192), Expect = 2.330e-13 Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 2
Query: 578 EAVTVKLELLDKGKCPRYHLDKVPIRLICTYVGPSTEWLDAYDKWEMINNRRPPPACNIKISAGREPRSAGPGDVLIFRGQPEEGLVQGSALAVAHRSPDTLDGQRRLVLTMD 916
+ + ++L LDK CPR+H+D VP+RL+ TY GP+++WL+ +W M R A A E R GDV +F+G+ G + GS + HRSP G+RRL+LT+D
Sbjct: 103 QRIGLRLRSLDKAMCPRFHVDHVPLRLVTTYAGPASQWLE---EWAMARARLGDAAAEPASRA--EIRQMAAGDVGLFKGEKWAGNL-GSG--IIHRSPLPAPGERRLLLTLD 207
BLAST of mRNA_P-fluviatile_contig14.2138.1 vs. uniprot
Match: UPI00201FF04D (DUF1826 domain-containing protein n=1 Tax=Pseudomonas sp. NW5 TaxID=2934934 RepID=UPI00201FF04D) HSP 1 Score: 78.6 bits (192), Expect = 2.370e-13 Identity = 54/156 (34.62%), Postives = 79/156 (50.64%), Query Frame = 2
Query: 461 DIEHLASLFAR---QALALAAAKSPSREGPTLLDTRRQLPREEAVTVKLELLDKGKCPRYHLDKVPIRLICTYVGPSTEWLDAYDKWEMINNRRPPPACNIKISAGREP-RSAGPGDVLIFRGQPEEGLVQGSALAVAHRSPDTLDGQRRLVLTMD 916
++ HLAS F+ A +A + LLD RR V ++L LLDK CPR+H+D+VP+RL+ TYVG ++WL + N+ + + S GDV + +G+ EG G A+ HRSP D +RRL+LT+D
Sbjct: 70 ELHHLASEFSNLPGYAAFIADVSWLLQAYACLLDARR-------VGLRLRLLDKAMCPRFHVDRVPLRLVTTYVGAGSQWLADTPLARLQ-------LSNLALEVAEDMIHSMRTGDVALLKGERWEGNEHG---AIIHRSPPVSDDERRLLLTLD 208
BLAST of mRNA_P-fluviatile_contig14.2138.1 vs. uniprot
Match: A0A1H1XWC5_9PSED (Uncharacterized protein n=1 Tax=Pseudomonas oryzae TaxID=1392877 RepID=A0A1H1XWC5_9PSED) HSP 1 Score: 78.6 bits (192), Expect = 2.470e-13 Identity = 48/126 (38.10%), Postives = 70/126 (55.56%), Query Frame = 2
Query: 545 LLDTRRQLPREEAVTVKLELLDKGKCPRYHLDKVPIRLICTYVGPSTEWL--DAYDKWEMINNRRPPPACNIKISAGREPRSAGPGDVLIFRGQPEEGLVQGSALAVAHRSPDTLDGQRRLVLTMD 916
LLDTRR V ++L +LD+ CPR+H+D+VP+RL+ TY GP ++WL A + + + PPA I R+ G V + +G+ EG A+ HRSP G+RRL+LT+D
Sbjct: 103 LLDTRR-------VGLRLRVLDRAMCPRFHVDRVPLRLVTTYAGPGSQWLAEGALARARLGDPAAEPPAQAI--------RTLQAGHVALLKGERWEGNEH---TAIVHRSPPLAAGERRLLLTLD 210 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2138.1 >prot_P-fluviatile_contig14.2138.1 ID=prot_P-fluviatile_contig14.2138.1|Name=mRNA_P-fluviatile_contig14.2138.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=92bp MINNRRPPPACNIKISAGREPRSAGPGDVLIFRGQPEEGLVQGSALAVAHback to top mRNA from alignment at P-fluviatile_contig14:1255900..1257550- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2138.1 ID=mRNA_P-fluviatile_contig14.2138.1|Name=mRNA_P-fluviatile_contig14.2138.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1651bp|location=Sequence derived from alignment at P-fluviatile_contig14:1255900..1257550- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:1255900..1257550- >mRNA_P-fluviatile_contig14.2138.1 ID=mRNA_P-fluviatile_contig14.2138.1|Name=mRNA_P-fluviatile_contig14.2138.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=552bp|location=Sequence derived from alignment at P-fluviatile_contig14:1255900..1257550- (Porterinema fluviatile SAG_2381)back to top |