mRNA_P-fluviatile_contig14.2113.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2113.1 vs. uniprot
Match: D7FQF2_ECTSI (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQF2_ECTSI) HSP 1 Score: 455 bits (1170), Expect = 1.150e-145 Identity = 217/279 (77.78%), Postives = 248/279 (88.89%), Query Frame = 1
Query: 568 RDGLFDNVVIGEGVTSESLKGALSGRSIMEVRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGEKRLEFC-FKITEEWPPRFTKLELQMSNGTCLALTDPRRLARVRLREEPESSPPISLLGPDPVTHPLSLEVFAAALAKSTAPIKAVLLAQDRVVSGIGNWVSDEVCFQGRVHPGARCNTLSPEQVAALHAKLLSVCREACEVQADYTAFPVDWLFHHRWSKGKNSQGAPRVSSGDPVLFDVVGGRTTAVVPALQKMGLLVSPQSGAGGKPGQSSAPA 1401
RDG FD++VIGE +T++SLK L GR I+E+RRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGEKR +F FK++EEWPPRF KLE+QMSNG CLALTDPRRL+RV+LR EPE+SPPISLLGPDP+THPLSLE FAAALAK TAPIKAVLLAQDRVVSG+GNWV+DEVCFQ VHPGA CNTL PEQ+AALH++LLSVCREACE +ADYT+FP +WLFHHRW KGKNS+GAPRVSSG P++FDVVGGRTTA+VPA+QK GLL SP + +GG G+ S A
Sbjct: 36 RDGQFDDIVIGEDMTAKSLKDTLEGRKIVELRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGEKRHKFVKFKVSEEWPPRFAKLEIQMSNGACLALTDPRRLSRVKLRAEPEASPPISLLGPDPLTHPLSLETFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQACVHPGAACNTLDPEQIAALHSRLLSVCREACEARADYTSFPKEWLFHHRWGKGKNSEGAPRVSSGHPIVFDVVGGRTTAIVPAVQKKGLLRSPTAASGGVDGRRSGSA 314
BLAST of mRNA_P-fluviatile_contig14.2113.1 vs. uniprot
Match: A0A6H5JAV5_9PHAE (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV5_9PHAE) HSP 1 Score: 386 bits (991), Expect = 2.680e-116 Identity = 200/294 (68.03%), Postives = 232/294 (78.91%), Query Frame = 1
Query: 568 RDGLFDNV-VIGEGVTSESLKGALSG-RSIMEVRRRG---KQMWFVLDKPPHPLFHFGMTGAFTVKGEKRLEFC-FKITEEWPPRFTKLELQMSNGTCLALTDPRRLARVRLREEPESSPPISLLGPDPVTHPLSLEVFAAALAKSTAPIKAVLLAQDRVVSGIGNWVSDEVCFQGRVHPGARCNTLSPEQVAALHAKLLSVCREACEVQADYTAFPVDWLFHHR--------------WSKGKNSQGAPRVSSGDPVLFDVVGGRTTAVVPALQKMGLLVSPQSGAGGKPGQS 1389
++ LFD V V+ + ESL +SG R + +R R ++ + +PPHPLFHFGMTGAFTVKGEKR +F FK++EEWPPRF KLELQMSNG CLALTDPRRL+RV+LR EPE+SPPISLLGPDP+THPLSLE FAAALAK TAPIKAVLLAQDRVVSG+GNWV+DEVCFQ VHPGA CNTL PEQVAALH++LLSVCREACE +ADYT+FP +WLFHHR W KGKNS+GAPRVSSG P++FDVVGGRTTA+VPA+QK GLL SP + +GG G S
Sbjct: 263 KEHLFDVVEVVVKTEFEESLWLKISGERGMQNIRVRPPLISRLHPIASRPPHPLFHFGMTGAFTVKGEKRHKFVKFKVSEEWPPRFAKLELQMSNGACLALTDPRRLSRVKLRAEPEASPPISLLGPDPLTHPLSLETFAAALAKPTAPIKAVLLAQDRVVSGVGNWVADEVCFQACVHPGAACNTLDPEQVAALHSRLLSVCREACEARADYTSFPKEWLFHHRQGMHHPRSPTRTLLWGKGKNSEGAPRVSSGHPIVFDVVGGRTTAIVPAVQKKGLLRSPTAASGGVGGSS 556
BLAST of mRNA_P-fluviatile_contig14.2113.1 vs. uniprot
Match: A0A7S1N840_9EUGL (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N840_9EUGL) HSP 1 Score: 278 bits (712), Expect = 7.320e-81 Identity = 142/259 (54.83%), Postives = 176/259 (67.95%), Query Frame = 1
Query: 568 RDGLFDNVVIGEGVTSESLKGALSGRSIMEVRRRGKQMWFVLDKPP-HPLFHFGMTGAFTVKGEKRLEFC-FKITEE-WPPRFTKLELQMSNGTCLALTDPRRLARVRLREEPESSPPISLLGPDPVTHPLSLEVFAAALAKSTAPIKAVLLAQDRVVSGIGNWVSDEVCFQGRVHPGARCNTLSPEQVAALHAKLLSVCREACEVQADYTAFPVDWLFHHRWSKGKNSQGAPRVSSGDPVLFDVVGGRTTAVVPALQK 1335
RDG FD++VIGEGVT E L ++ GR ++ V R+GKQ+WF L PLFHFGMTG+FTVKG K L++ F + +E WPPRFTKLEL + G LA TDPRRL RV+LR P + PPISLL PDPVT P E F+ L K+ PIKAVLL Q+R V G+GNWV+DEV FQ ++PG L+ QV LHA ++ VC+EAC+ QAD FP+DWLFH+RW GK+ A R+ G + F+ GRTTA VP QK
Sbjct: 50 RDGQFDDIVIGEGVTPEKLTKSMKGRKLVAVHRKGKQLWFELGGGDLSPLFHFGMTGSFTVKGVKALKYKEFLVRDEVWPPRFTKLELVFTGGVRLAFTDPRRLGRVKLRAAPVTEPPISLLAPDPVTGPFHCEAFSQILRKAQTPIKAVLLDQERAVCGVGNWVADEVLFQSGIYPGTTAAQLTDAQVETLHATIIRVCKEACQAQADSDRFPLDWLFHYRWGHGKS---ADRLPDGRRIAFETCAGRTTAWVPEAQK 305
BLAST of mRNA_P-fluviatile_contig14.2113.1 vs. uniprot
Match: A0A7S2UZQ4_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZQ4_9STRA) HSP 1 Score: 264 bits (675), Expect = 4.170e-74 Identity = 131/275 (47.64%), Postives = 175/275 (63.64%), Query Frame = 1
Query: 568 RDGLFDNVVIGEGVTSESLKGALSGRSIMEVRRRGKQMWFVLDKPP-----------------HPLFHFGMTGAFTVKGEKRLEFCFKITEE---WPPRFTKLELQMSNGTCLALTDPRRLARVRLREEPESSPPISLLGPDPVTHPLSLEVFAAALAKSTAPIKAVLLAQDRVVSGIGNWVSDEVCFQGRVHPGARCNTLSPEQVAALHAKLLSVCREACEVQADYTAFPVDWLFHHRWSKGKNSQGAPRVSSGDPVLFDVVGGRTTAVVPALQ 1332
R+GLFD +++GEG+ +E++ A+ GR + V RRGKQ+WF + P H LFH GMTG+F ++G+ + + E+ WPPRF KLEL NG +A DPRRL R++LR P SPPISLL DPV P +L F L + +AP+KA LL Q ++VSG+GNW++DEVCFQ RVHP RCN L+ E A LH+ LL +C+ A +V+ADY FP WLFH+RW KG + ++ +GD + F VGGRTTAVVPA+Q
Sbjct: 36 REGLFDEIIMGEGLDAENITKAMLGRRLQAVGRRGKQLWFTFSEKPTEKSKKKKEDAAESCSSHVLFHLGMTGSFRIQGKDGVCYVRLKPEDKTVWPPRFCKLELVFENGVRVAFCDPRRLGRIKLRSNPLESPPISLLARDPVEDPPTLAQFQDRLKELSAPVKAALLDQSKIVSGVGNWIADEVCFQARVHPATRCNDLTEEMSARLHSSLLDICKFAVDVEADYHQFPDSWLFHYRWGKGNKTNS--KMPNGDKIEFSEVGGRTTAVVPAVQ 308
BLAST of mRNA_P-fluviatile_contig14.2113.1 vs. uniprot
Match: A0A835YY62_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY62_9STRA) HSP 1 Score: 264 bits (674), Expect = 2.310e-73 Identity = 134/281 (47.69%), Postives = 179/281 (63.70%), Query Frame = 1
Query: 568 RDGLFDNVVIGEGVTSESLKGALSGRSIMEVRRRGKQMWFVLD-KPPHPLFHFGMTG---------------AFTVKGEKRLE----FC---FKITEEWPPRFTKLELQMSNGTCLALTDPRRLARVRLREEPESSPPISLLGPDPVTHPLSLEVFAAALAKSTAPIKAVLLAQDRVVSGIGNWVSDEVCFQGRVHPGARCNTLSPEQVAALHAKLLSVCREACEVQADYTAFPVDWLFHHRWSKGKNSQGAPRVSSGDPVLFDVVGGRTTAVVPALQKMG 1341
RDG FD++++GEGVT E + AL GR ++ R+GK +W L+ K HP H GMT AFTV ++ +C ++ +EWP RFTKLE+ SNG LA TDPRRL R+ LR +P+S PPIS L PDP+ P ++E A AK +AP+KAVLL Q+R+V G+GNWV+DEVC+Q +HPG+ CNTLS EQ++ LH L+ V ACE AD +P WLFH+RWSK +N+ G + G+P+ F+ VGGRTTA+VP + K G
Sbjct: 36 RDGQFDDIIMGEGVTEEDVVAALKGRKLLHAGRKGKNLWLELEGKGKHPTMHLGMTACNFRSEQRQLFFLLCAFTVHHNSLMDVLVTWCCSLLQVGDEWPLRFTKLEIDFSNGVKLAFTDPRRLGRICLRADPKSEPPISTLAPDPLYEPPTVEDLVARFAKISAPLKAVLLDQNRIVCGVGNWVADEVCYQAGIHPGSPCNTLSAEQISQLHEALIQVVTVACEANADSDKYPKSWLFHYRWSK-RNNGGKVTDAHGNPIEFETVGGRTTALVPKVMKKG 315
BLAST of mRNA_P-fluviatile_contig14.2113.1 vs. uniprot
Match: A0A7S2W0X7_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0X7_9STRA) HSP 1 Score: 256 bits (653), Expect = 5.250e-73 Identity = 134/274 (48.91%), Postives = 169/274 (61.68%), Query Frame = 1
Query: 568 RDGLFDNVVIGEGVTSESLKGALSGRSIMEVRRRGKQMWFVL-DKPPHP--------------LFHFGMTGAFTVKGEKRLEFC-FKITEEWPPRFTKLELQMSNGTCLALTDPRRLARVRLREEPESSPPISLLGPDPVTHPLSLEVFAAALAKSTAPIKAVLLAQDRVVSGIGNWVSDEVCFQGRVHPGARCNTLSPEQVAALHAKLLSVCREACEVQADYTAFPVDWLFHHRWSKGKNSQGAPRVSSGDPVLFDVVGGRTTAVVPALQKMG 1341
R+G FD++VIGEGV+ + AL R + RRGKQ+WF L D P LFH GMTG+F VKG R+ + FK+ E WPP+FTKL L+ G +A DPRRL R+ LR PE PPIS L PDP+ PL F + L + P+K+VLL Q++VV G+GNWV+DEV +Q RVHP A+ N+LS Q A+H L VCR A V A AFP DWLFH RW KGK G + + G V+F+ +GGRT+A+VPA QKMG
Sbjct: 4 REGQFDDIVIGEGVSEADITAALVSRRFVSAHRRGKQVWFCLSDHKPGSRSGTKGLAGEATAVLFHCGMTGSFAVKGVDRVSYVRFKVDEAWPPKFTKLLLKFEGGVEVAFCDPRRLGRILLRRCPEEEPPISKLAPDPIEQPLQSAEFCSRLQSFSGPVKSVLLDQEKVVCGVGNWVADEVLYQARVHPNAKANSLSDSQALAVHESLDVVCRTAVSVNARSAAFPEDWLFHVRWGKGK---GPVKDAQGQRVVFETIGGRTSAIVPARQKMG 274
BLAST of mRNA_P-fluviatile_contig14.2113.1 vs. uniprot
Match: A0A516AG26_LINPO (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Lingulodinium polyedra TaxID=160621 RepID=A0A516AG26_LINPO) HSP 1 Score: 249 bits (637), Expect = 8.300e-71 Identity = 132/263 (50.19%), Postives = 167/263 (63.50%), Query Frame = 1
Query: 571 DGLFDNVVIGEGVTSESLKGALSGRSIMEVRRRGKQMWFVLD-KPPHPLFHFGMTGAFTVKGEKRLEF-CFKITEEWPPRFTKLELQMSNG----TCLALTDPRRLARVRLREEPESSPPISLLGPDPVTHPLSLEVFAAALAKSTAPIKAVLLAQDRVVSGIGNWVSDEVCFQGRVHPGARCNTLSPEQVAALHAKLLSVCREACEVQADYTAFPVDWLFHHRWSKGKNSQGAPRVSSGDPVLFDVVGGRTTAVVPALQKMG 1341
DG FD+ VIGEGV + L+ AL R ++ RRRGK +W L + P LFH GMTGA + G +R F F++ E WPPRFTKL+L++ T LA DPRR +V LR+ PP+SLLGPDP+ P LE FA L +S AP+KA+LL Q++ V G+GNWV+DEV + RVHP A TLS Q+AALH +LSV + A V AD FP +WLFH RW +G + G + G V F+ VGGRTTA VPALQ+ G
Sbjct: 37 DGKFDSKVIGEGVGPQQLEAALLRRPVLAARRRGKHLWLELGGQGPQLLFHCGMTGALAIDGVERFSFQSFRVDEAWPPRFTKLQLELGGRGQEPTRLAFADPRRFGKVLLRQNAAEEPPVSLLGPDPLASPFPLEAFAEQLRRSAAPVKALLLDQEKAVCGVGNWVADEVLREARVHPAAPARTLSDGQLAALHRGVLSVLKRAVAVDADAARFPKNWLFHCRWGQGPSGAGVC-LPDGSEVAFEDVGGRTTAYVPALQRPG 298
BLAST of mRNA_P-fluviatile_contig14.2113.1 vs. uniprot
Match: A0A516AGR0_CRYCO (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=2 Tax=Crypthecodinium cohnii TaxID=2866 RepID=A0A516AGR0_CRYCO) HSP 1 Score: 231 bits (590), Expect = 8.370e-64 Identity = 127/271 (46.86%), Postives = 161/271 (59.41%), Query Frame = 1
Query: 568 RDGLFDNVVIGEGVTSESLKGALSGRSIMEVRRRGKQMWFVLDKP-PHPLFHFGMTGAFTVKGEKRLEF-CFKITEEWPPRFTKLELQM-------SNGTCLALTDPRRLARVRLREEPESSPPISLLGPDPVTHPLSLEVFAAALAKSTAPIKAVLLAQDRVVSGIGNWVSDEVCFQGRVHPGARCNTLSPEQVAALHAKLLSVCREACEVQADYTAFPVDWLFHHRWSKGKNSQGAPRVSSGDPVLFDVVGGRTTAVVPALQKMGLLVS 1353
R G FD++VIGE V ++ L R I V+R GKQ+W L H LFH GMTG +V+G KRL+F F +EWPP+FTKL+L + L DPRRL R+ LRE+P S PPI L PDP+ L+VF L+KS P+KAVLL Q ++V+G+GNWV+DEV R+HP A TLS QVA+L + S+ R A +V AD FP WLFH RW G + G ++F V GRTTA+VP+ QKMGLL S
Sbjct: 52 RTGKFDSIVIGERVKEQTFVKTLQNRRITAVKRIGKQIWLELSGDGAHLLFHCGMTGCLSVEGAKRLKFQYFGKGKEWPPKFTKLQLVCKKKGAPGNKSKRLVFFDPRRLGRILLREQPRSEPPICHLAPDPLVELPRLDVFCEVLSKSNMPVKAVLLDQTKLVAGVGNWVADEVLHAARIHPAAIAKTLSKAQVASLRRSISSIVRAAVKVDADAERFPKKWLFHKRWQAGSQRRDVQLPGHGGTLVFRTVAGRTTALVPSRQKMGLLAS 322
BLAST of mRNA_P-fluviatile_contig14.2113.1 vs. uniprot
Match: A0A2P6TC37_CHLSO (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TC37_CHLSO) HSP 1 Score: 234 bits (596), Expect = 1.010e-63 Identity = 124/246 (50.41%), Postives = 161/246 (65.45%), Query Frame = 1
Query: 607 VTSESLKGALSGRSIMEVRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGEKRLEFCFKITEE--WPPRFTKLELQMSNGTCLALTDPRRLARVRLREEPESSPPISLLGPDPVTHPLSLEVFAAALAKSTAPIKAVLLAQDRVVSGIGNWVSDEVCFQGRVHPGARCNTLSPEQVAALHAKLLSVCREACEVQADYTAFPVDWLFHHRWSKGKNSQGAPRVSSGDPVLFDVVGGRTTAVVPALQKM 1338
V + L+ AL GR+I+ +RRGKQMW+ LD P L HFGMTG VKG + + ++ WPPRF K+EL++ +GT +A D RR A+VR E+PE PPIS LG DP+ + +LE F AALA IKA+LL Q +GIGNWV+DEV +Q RVHP NT+ +QVAALHA + VCR A EV+AD FP+DWLFH+RW KG + ++ SG + VGGRT+AVVPA+QK+
Sbjct: 38 VKPQELQAALVGRTIVAAKRRGKQMWWELDAGPSLLLHFGMTGGLVVKGIGAAHYKSFVIDDSAWPPRFCKIELKLEDGTQVAFCDSRRFAKVRFLEDPEGRPPISELGWDPLLNMPALEAFQAALAGQRRAIKALLLDQS-FSAGIGNWVADEVLYQSRVHPEQPANTIPADQVAALHAAIRDVCRLASEVEADADRFPLDWLFHYRWGKGNGQKS--KMPSGQAIEHLTVGGRTSAVVPAVQKL 280
BLAST of mRNA_P-fluviatile_contig14.2113.1 vs. uniprot
Match: A0A507CH30_9FUNG (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CH30_9FUNG) HSP 1 Score: 230 bits (586), Expect = 7.840e-63 Identity = 117/254 (46.06%), Postives = 161/254 (63.39%), Query Frame = 1
Query: 583 DNVVIGEGVTSESLKGALSGRSIMEVRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGEKRLEFC-FKI-TEEWPPRFTKLELQMSNGTCLALTDPRRLARVRLREEPESSPPISLLGPDPVTHPLSLEVFAAALAKSTAPIKAVLLAQDRVVSGIGNWVSDEVCFQGRVHPGARCNTLSPEQVAALHAKLLSVCREACEVQADYTAFPVDWLFHHRWSKGKNSQGAPRVSSGDPVLFDVVGGRTTAVVPALQKM 1338
++ ++ G++ AL GR+I R GK W LD+ PH + HFGMTG+ VKG+K LE+ FK +E WPPRF K L +SNG+ LA D RRLARVR+ + + PPIS L PD +P SL VF + +K APIK++LL Q+ +V+GIGN++ DE+ +Q VHPG + LS E+ + K+ + + A E AD+ FP DWLFHHRW KGK A SSG ++F+ VGGRT+A+VP +QK+
Sbjct: 29 EDSLVFSGISHTDFAKALVGRTITSTGRHGKNFWISLDQAPHAVMHFGMTGSILVKGQKGLEYKDFKTDSETWPPRFHKFILVLSNGSELAFADARRLARVRIVNDILNEPPISELAPDAYLNPPSLPVFLSQTSKRNAPIKSILLDQNAIVAGIGNYLVDEILYQAHVHPGQHGSVLSKEEAGNILTKMAEILKVAVEANADFHQFPQDWLFHHRWGKGKGKLSA--TSSGQKIIFETVGGRTSAIVPEVQKL 280 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2113.1 >prot_P-fluviatile_contig14.2113.1 ID=prot_P-fluviatile_contig14.2113.1|Name=mRNA_P-fluviatile_contig14.2113.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=447bp MEVRRRGKQMWFVLDKPPHPLFHFGMTGAFTVKGEKRLEFCFKITEEWPPback to top mRNA from alignment at P-fluviatile_contig14:1066547..1072087+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2113.1 ID=mRNA_P-fluviatile_contig14.2113.1|Name=mRNA_P-fluviatile_contig14.2113.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5541bp|location=Sequence derived from alignment at P-fluviatile_contig14:1066547..1072087+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:1066547..1072087+ >mRNA_P-fluviatile_contig14.2113.1 ID=mRNA_P-fluviatile_contig14.2113.1|Name=mRNA_P-fluviatile_contig14.2113.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2682bp|location=Sequence derived from alignment at P-fluviatile_contig14:1066547..1072087+ (Porterinema fluviatile SAG_2381)back to top |