mRNA_P-fluviatile_contig14.2077.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2077.1 vs. uniprot
Match: D8LM78_ECTSI (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM78_ECTSI) HSP 1 Score: 1408 bits (3644), Expect = 0.000e+0 Identity = 1016/1903 (53.39%), Postives = 1150/1903 (60.43%), Query Frame = 2
Query: 77 MGNYDRPPSVAGNREYKYG-----PLSQHCGSGAGEDL------RLIFWPVLDLLLLASLLLPIQLYRNITLEQCWDPWSYKAGEGLWLRAIRGTWILWLFHASGIIDEALRVFLGLRLTMGLGSPTSVDKTYTKMSRKAEIVAEGIAVDDFPALTSLYAGAQPPSANKRSSSATLRLGDGREG--EATSYAAGVAAA-RARVNRSLVMSVEKIAATAQLWSLVPWSSVRRYDRVHVKGITLRLKQVNGILNFSFVALDVKKGRVGA----GSGAVVGAAAXXXXXXXXXXXXXXXXXXXXXXXGCPSCFDGSAAP-AQFSGCGISMEDLDGIDTDGEYTTDTDEPLDGSGRAQEKGHGGXXXXXXXXXXSMYGGAIDAELPSAAAAQHCAGSAVGGKYSVDDGSGFTRRRSRSSSKAT-SAEENPLRPQSASTFAGAVGAGTRKASAPWTAQAAHGRLASGQGAHRGAAGRQERPVSLAARP-----------------KRSKPQSSSSSENLGNLGVFKVLGEAGDAFMRRFNAYSEQVSAAFDRVSDIKVVPNFWRWGGKRQGPRKRKRYEVGEIFLEDVCICVDAGVWNDLLGDQVGAAFSPEFRLSVNVGPKELLTPNGKGRLPGDIGKLVNDKLVRLLSRLVMRETLKTSTLTSVVIASLALDTDARRXXXXXXXXXXXXXXXXXXQAGQEPGQRFAERVAPARRGSFGSGSDMAVVAEATETAATAGDHRSGKFWRHFATHSSTTPGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSSGQNQPYINGSGHRWKQPPSGSDGTSIPDNSLNGHSPADANALSVTGGGGAEGARGRRAHRAKITLPGIGTWRRNSESAPSATFAGXXXXXXXXXXXXXXXXXXXXXXXXGVWNGGGADIDDSEGEDGRGDLARSWWLGGKRGVRERRGTTGDIGVAGVEEGGGESFETVAKVPPWMEGVEATAEYEEMKPTLDVIKQTVLLAVLQQSNRAADQSALY----QAHTDADAKQNGRTWGRRQASRSKS-----GEEL-LRGEDK-TVEEEMQRFLVAAKEAGGDVDRIVMERLLDGVRESGPDTAYKALASIELSSFLDNLSNGTRFAQHLDHLGIDVARVSRSLAGITARDIMEGVKDTAGKVGGEARRLRTEAVRVQRELLEETGILPLLNDAGGGNDATSLAAAVGLLSDALTGEHNASGPGXXXXXXXXXX-----------SKESWERGVSVPSNPDEEGHSVENGLRRTSI----GGDAEEVDEVDVIMQMLDLIDAVERLKKGIVEGGVSLGKVEQAVGRVAEGIDVYLILAASESMLGFLLERLGKLPVGHAKFASKGVEARVWNLDLEGVHVKRENVDLVMKGFRLPKRGTPVMTMFGPGKIKRYKKRSRCFVVNLDWTMSNGKPVKAYLQPNDIEILEGHEGHLTDEEAATENGCTKVTVENVDVESAIPSLGVPESSKGGGSSAGRGAXGGADGSSTFPQPSPIHRSHSGTTSGGSAPALPP-RSDKGGRWHVLPRIWNRRKSTGAAAAPPDS--------VGLRHESEKAVTAGCRGGGGKAAVGRTTAGRKTAVRAASAPAMVGGSTT---PRPSSSCSTSKAALEGTPEGLDDLDCAVA-SVTESEILPTEDDPS---VAGAAIAASEXXXXXXXXXXXXXXXXXXXXDAEG---VRCRRQRSGSQGSITGPSRSEVMSAPFLVARISGVGAELEDIMWSVRQTHFPHLRTTGSLQATLSGLTIELELDTQDLPTEPGGKKHQGGGTFGNEGLAENGGGDGVXXXXXXXXXXXXXXXXXXXXXRVSVLLVKVQVKNNALSAVYNLAASAFEAAVKRYVVESVEAAVRRNVTSLLTIVNTQLIRKWGVLCKVGGGMGS 5539
MG +DRPPS AG+ E++Y PL + G E R I PVLD LLLA++LLP L+ ++ EQCW+P SYKA E LR RG WI WL HA+G++DEALRVFLG+RLTMGLGSPTSVDKTYTKMSR+AEIVAEGIAVDDFPAL LYAGA+PP ANKRSSS T R G GR G + TSYAAG+AAA RARVN+SLVM VE+IAATA+LWSLVPWS VRRYDRVHVKGITLRL+QVNGILNFSF+AL KKGR G G A V XXXXXXX G + +GSA A G G S+EDLDGIDTDGE TTDTDE L+ KG + YG DA+L ++A AG+ D + RRR+RSSS + SA+E LR QS +T +GA G R+ + PW A A KR K SSSEN GNLGVFKVLGEA FMRRFNAYS+QVSAAFDRVSDIKVVP WRWG KR GP++RKR+EVGEIFLEDVCICVD+GVWNDLLGDQVGAAFSPEFRLSV VGPKELLTPNGKGRLPGDIGKL+NDKLVRLL+RLVMRETLKTSTLTSVVI SLALDTDAR P +R R A A S + + V A A TAA +S T A + +NSL+ P + GG GIG XXXXXXXXXXXXXXXXXXXXXXXX +S ETVAKVPPWMEGVEA+ EYEEMKPTLDVIKQTVLLA+LQQ+NR+ D S Q D +AK NGRTWGRR ASRS S GE L L GEDK T+E MQR ++AA+EAGGDVDR+VM+RLL GVR+SGPDTAYKALASIELSSF+D +S GTRFAQHLDHLGIDV R+SRSL+G+TA ++MEGVKDTAGKVG EARRLRTEAVRVQ+ELL+E+GILPLLNDAGG +DATSLAAAVGLL+DAL+GEHN + XXXXXXXXXX +ESWERGV+VP++P+EEGHSVE+GLR I GGD + ERLKK IVEGGVSLGKVEQAVG+VA+GIDVYLILAASESMLGFLLERLGKLPVGHAKFA KGVEARVWNLDLEGVHVKRENVDLVMKGFRLPKRGT VMT FGPG IKRYKKRSRCFVVNLDW + +GK VKAYLQPNDIEILEGHEG L+DEE E+G TKVTV+ + +++ + P SK AP+LPP R+++GGRW LPRIWNRRKS GA A + VG E+ V A + GG + G+ A R ASAP ++ STT P+ S + P G D A A ++E + S AG D G V R +R SQG ITGP+ ++VMSAPFLVARISGVGAEL+DIMW+V+QTHFP+LRT GSLQATLSGLTIELELDTQ+LP KK QGGG+ + E+ XXX RVSVL VKV VKNNALSAVYNLAASAFEAAVKR+VVE+VEAAVR+NVTSLLTI+NTQL KW VLCKVGGG GS
Sbjct: 1 MGKFDRPPSAAGHAEFEYVHYDGMPLQRLASEGPEEAAAREEHNRRILRPVLDFLLLAAVLLPWTLWWDMAGEQCWNPSSYKATEPTLLRVTRGVWIAWLTHAAGLLDEALRVFLGIRLTMGLGSPTSVDKTYTKMSRQAEIVAEGIAVDDFPALVRLYAGAEPPRANKRSSSGTARSGSGRIGGDDGTSYAAGLAAAARARVNKSLVMRVERIAATARLWSLVPWSDVRRYDRVHVKGITLRLRQVNGILNFSFLALK-KKGRSGVVGLVGDAAAVXXXXXXXXXXXGADMAGGSRRAMSFGGGPAAGPEGSAGVGAPGYGNGRSLEDLDGIDTDGEDTTDTDELLEYEEEDDHKGE-------EEGDGACYGPVNDADLLASAGGGDAAGN-------CDAIALLGRRRARSSSSSMMSADEASLRSQSVTT-SGAPGCEARRGTTPWAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRKKAAPLSSSENHGNLGVFKVLGEA---FMRRFNAYSDQVSAAFDRVSDIKVVPKLWRWGKKR-GPKRRKRFEVGEIFLEDVCICVDSGVWNDLLGDQVGAAFSPEFRLSVRVGPKELLTPNGKGRLPGDIGKLLNDKLVRLLARLVMRETLKTSTLTSVVITSLALDTDAR---------GRRLQGKHNKSLSPPPIERGHRRHAGA------SETTLPVHASAVATAAP----------------TSATASAGS----------------------------------------------------------------ENSLSQSPPPRSRVRQRPGG--------------LAARSGIGAVSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVETVAKVPPWMEGVEASPEYEEMKPTLDVIKQTVLLAMLQQTNRSVDLSTEGFEEPQHQGDINAKHNGRTWGRRHASRSSSTSKNAGEMLELEGEDKRTLERRMQREIIAAEEAGGDVDRLVMKRLLAGVRDSGPDTAYKALASIELSSFIDKVSKGTRFAQHLDHLGIDVKRLSRSLSGLTAGEMMEGVKDTAGKVGDEARRLRTEAVRVQKELLDESGILPLLNDAGGRDDATSLAAAVGLLTDALSGEHNTASXXXXXXXXXXXXXXXXXXXLVPQDEESWERGVAVPNDPEEEGHSVESGLRSAGIVGGGGGDLDXXXXXXXXXXXXXXXXXXERLKKSIVEGGVSLGKVEQAVGKVAQGIDVYLILAASESMLGFLLERLGKLPVGHAKFAGKGVEARVWNLDLEGVHVKRENVDLVMKGFRLPKRGTAVMTKFGPGNIKRYKKRSRCFVVNLDWRLGSGKRVKAYLQPNDIEILEGHEGRLSDEEEVKESGHTKVTVDTSEADASTLAPEEPGGSK--------------SXXXXXXXXXXXXXXXXXXXXXXXAPSLPPPRAERGGRWPSLPRIWNRRKSAGAPQAAASAELGPVGVGVGDGXXXERVVAAAGKPGG--------SGGKTMARRTASAPVLLLPSTTGALPQQQGEGDPSARVVSTEPLGEDLCSSAFAREAGQAETTSSSVSSSWREAAGTTTCHPARENAPPRSRILDDGDDGVAEDGRGFGEVHRRTERINSQGPITGPNSADVMSAPFLVARISGVGAELKDIMWAVKQTHFPYLRTQGSLQATLSGLTIELELDTQELPAGQR-KKPQGGGSGSGGAVGESD----XXXXIDRGGSGGSPTGLKLTRLRVSVLAVKVHVKNNALSAVYNLAASAFEAAVKRHVVENVEAAVRKNVTSLLTIINTQLSEKWNVLCKVGGGNGS 1730
BLAST of mRNA_P-fluviatile_contig14.2077.1 vs. uniprot
Match: A0A836CGM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGM5_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 5.680e-16 Identity = 236/979 (24.11%), Postives = 349/979 (35.65%), Query Frame = 2
Query: 1517 GVFKVLGEAGDAFMRRFNAYSEQVSAAFDRVSDIKVVPNFWRWGGKRQG---PRKRKRYEVGEIFLEDVCICVDAGVWNDLLGDQVGAAFSPEFRLSVNVGPKELLTPNG-----KGRLPG-----------------------------------------DIGKLVNDKLVRLLSRLVMRETLKTSTLTSVVIASLALDTDARRXXXXXXXXXXXXXXXXXXQAGQEPGQRFAERVAPARRGSFGSGSDMAVVAEATETAATAGDH--RSGKFWRHFATHSSTTPGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSSGQNQPYINGSGHRWKQPPSGSDGTSIPDNSLNGHSPADANALSVTGGGGAEGARGRRAHRAKITLPGIGTWRRNSESAPSATFAGXXXXXXXXXXXXXXXXXXXXXXXXGVWNGGGADIDDSEGEDGRGDLARSWWLGGKRGVRERRGTTGDIGVAGVEEGGGESFETVAKVPPWMEGVEATAEYEEMKPTLDVIKQTVLLAVLQQSNRAADQSALYQAHTDADAKQNGRTWGRRQASRSKSGEELLRGEDKTVEEEMQRFLVA--------AKEAG-GDVDRIVMERLLDGVRESGPDTAYKALASIELSSFLDNLSNGTRFAQHLDH--LGIDVARVSRSLAGITARDIME-GVKDTAGKVGGEARRLRTEAVRVQRELLEETGILPLLNDAGGGNDATSLAAAVGLL------SDALTGEHNASGPGXXXXXXXXXXSKESWERGVSVPSNPDEEGHSVENGLRRTSIGGDAEEVDE--VDVIMQMLDLIDAVERLKKGIVEGGVSLGKVEQAVGRVAEGIDVYLI-------LAASESMLGFLLERLGKLPVGHAKFASKGVEARVWNLDLEGVHVKRENVDLVMKGFRLPKRGTPVMTMFGPGKIKRYKKRSRCFVVNLDWTMSNGKPVKAYLQPNDIEILEGHEG 4219
G F L E G+AF + F Y +QV AF RV IK++ G+ +G P++R++Y +G I ++D C+ V VW LLG+ VGAAF+P+ R V + EL+ +G +G G +IG++V D++V L + ++ E T L ++V+ +LA+D R XXXXXXXXXXXXXX G A A ++GS A+ A AT + H G+ WR GAA XXXX RW S DG + P A ++ GGG R LP + RR S+ SA SE G RG +++ G A G G +F V A + + L+V+K+T LLA+L+Q + + S+ +LR ++ + E+ L+A A AG +D + L V L R A L H G D+ R+ G+T ++E T + A LR EA R+Q +LL TG AG G+ ++ A S + T E A+G G + ++ +V ++ G E + + EE+ V ++ + + +DA + + I LAA E++L +L LGKLPV A A G N+DL G+ VD+ M+G RLP+R V T G G+I Y R+RCF+V LDW + +G+ + Y QP D+ +L G EG
Sbjct: 290 GSFGALRELGEAFSKTFQGYLDQVGEAFRRVGRIKLI-------GRPRGVGPPKRRRKYIIGSIRIDDACVAVGPSVWRQLLGEHVGAAFAPDLRAVVRLRTHELVRADGTGGGGRGGXXGVAXXXXXXXXXXXXXXXXXXGTVRXXXXXXXXXXXTGLYVREIGRMVQDRVVHQLCKGILNELGSTRMLATMVMGTLAVDARVRAAAGSXXXXXXXXXXXXXXXXXXXXG-------ASAAPSAYGS---PALSAMATPLGSDLDAHYFAHGEQWRRNTGEGLPEDGAADAAAXXXXEGDEQWRQRRRSRWGRLRGAAAAV------------------RWVSRLSSGDGDA--------ERPPAGGAGALRGGG-----LXXXXSRGTSPLPTPSSLRRPRPSSWSA----------------------------------------SE---------------GMRGFAQQQRAVSYNGAAAGGSGSGSAFAGGNPV--------AIGMVDTVSVVLEVVKRTALLAILRQGAXXXXXXXXXXXXXXXXE------YAAPECLCSEEDRRVLRAVEEGRDAEVMDALIAQVHRVSPAATYAGLAAIDLAALLHELHVVXXXXXXXXXXXXXXXXXXXXXRALQRDPRLALLLAHRPAGFDLRRLEAQCRGVTVGALLERAAAGTQQWLRERAGALRCEAERIQNDLLGGTG-----GGAGAGDARCAMGRAXXXXXXXXXRSPSAT-EAAAAGAGGADDGGRGFATL--FQVVSAVKADRPARGVVGEEAWLQAQRNAEREELRARMVALLRRGVAQLDAYQXXXXXXXXXXXXXXXXXXXHASATASLSEMRIRVLNLNVLAAVEALLRCVLGNLGKLPVARAHVARGGFAFDFSNVDLRGLSAPPA-VDVAMRGVRLPRRYAHVTTPLGRGRIASYMIRTRCFLVLLDWRLRDGRHARGYFQPRDVTVLSGREG 1142 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2077.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2077.1 >prot_P-fluviatile_contig14.2077.1 ID=prot_P-fluviatile_contig14.2077.1|Name=mRNA_P-fluviatile_contig14.2077.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=2103bp MGNYDRPPSVAGNREYKYGPLSQHCGSGAGEDLRLIFWPVLDLLLLASLLback to top mRNA from alignment at P-fluviatile_contig14:761062..779428- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2077.1 ID=mRNA_P-fluviatile_contig14.2077.1|Name=mRNA_P-fluviatile_contig14.2077.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=18367bp|location=Sequence derived from alignment at P-fluviatile_contig14:761062..779428- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:761062..779428- >mRNA_P-fluviatile_contig14.2077.1 ID=mRNA_P-fluviatile_contig14.2077.1|Name=mRNA_P-fluviatile_contig14.2077.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=12618bp|location=Sequence derived from alignment at P-fluviatile_contig14:761062..779428- (Porterinema fluviatile SAG_2381)back to top |