mRNA_P-fluviatile_contig14.2072.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.2072.1
Unique NamemRNA_P-fluviatile_contig14.2072.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig14.2072.1 vs. uniprot
Match: D7FNG9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG9_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 2.410e-117
Identity = 191/314 (60.83%), Postives = 219/314 (69.75%), Query Frame = 1
Query:   61 MTTLDFRGLLKQERERERERTLRQDPPKAADPAATCSSRSAVTL---------KGDSIQRGEVSPWFGELARRPFLEMEKMRVGDTPSVFYVPDFILEADEQQILARTYPTNVDRDAGNEWVSLRSRRLKCWGGKPGEKFCPEPLPPWVEALCDSLVARGVFAEENRPNHVLLNEYQPGQGIMAHTDGPYYEPRTATLSLGSDAVMHFSPRLAAADVGRPGVEYRPQSSLVLRARCLVVFADDAYSRQLHGIDAVREEMVGSSSXXXXXXX---------APVINAEAANAPEGTVLRRKLRVSLTFRRIRTGD 948
            MT+LDF+ LLKQE+  +R +  +     A                        +   +   E SP   +LA RP L+MEKMRVG+TPS+FYVPDFI  ADEQQ+L R +     + + NEWV+LRSRRLKCWGG+PGE F PEPLPPWV+ALC+SLV RGVF+EE RPNHVLLNEYQPGQGIMAHTDGP+YEPRTATLSLGSDAVMHFSPR+  + +GRPGVE RPQ+SLVLRA  LVVFADDAYSR LH IDAVREE VG                   APVIN  AA APEGT+LRRKLRVSLTFRR+R  D
Sbjct:    1 MTSLDFQSLLKQEKALQRVQLAQSTRTTAVQXXXXXXXXXXXXXXXXXXXXXXESKVVGTKEPSPLLVKLAGRPSLDMEKMRVGNTPSIFYVPDFISGADEQQLLERIHA----QASSNEWVTLRSRRLKCWGGQPGESFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCGGSSGDVGKRGGGGVGGGAPVINGAAAGAPEGTILRRKLRVSLTFRRVRAAD 310          
BLAST of mRNA_P-fluviatile_contig14.2072.1 vs. uniprot
Match: A0A835ZDT2_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT2_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.190e-53
Identity = 111/241 (46.06%), Postives = 140/241 (58.09%), Query Frame = 1
Query:  253 PFLEMEKMRVGDTPSVFYVPDFILEADEQQILARTYPTNVDRDAGNEWVSLRSRRLKCWGGK---PGEKFCPEPLPPWVEALCDSLVARGVFAEENRPNHVLLNEYQPGQGIMAHTDGPYYEPRTATLSLGSDAVMHFSPR-LAAADVGRPGVEYRPQSSLVLRARCLVVFADDAYSRQLHGIDAVREEMVGSSSXXXXXXXAPVINA-EAANAPEGTVLRRKLRVSLTFRRI----RTGD 948
            P ++++  R G  PSV+Y PDF+  +   +I+ + Y      +    W  LR+RRL+CWGG+    G    P  L PW++ LC  LV  G+F     PNHVL+NEYQPGQGIM HTDGP Y PRTATLSL SDAV   + R  +  D+G   V+  P  +L+LR R LVVFAD AY+   HGID V EE VG  S         V+N  EA  A E  V+ R LR+SLTFR +    RTG 
Sbjct:    6 PTVDLQSHRTGTIPSVYYNPDFVTASLADEIIKQVYAVP---EGHARWTVLRTRRLQCWGGQLQADGRAHDPSDLCPWLQQLCTLLVTCGIFPAHAPPNHVLINEYQPGQGIMPHTDGPMYYPRTATLSLMSDAVFKLAQRPRSPGDIG--SVDLSPTEALLLRNRSLVVFADAAYTDFTHGIDFVHEEAVGDGSGGT----CSVVNGPEAGVAEEEVVVERALRISLTFRHVPDAARTGQ 237          
BLAST of mRNA_P-fluviatile_contig14.2072.1 vs. uniprot
Match: A0A7S2G6U9_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6U9_9STRA)

HSP 1 Score: 197 bits (500), Expect = 7.840e-53
Identity = 110/239 (46.03%), Postives = 147/239 (61.51%), Query Frame = 1
Query:  226 PWFGELARRPFLEMEKMRVGDT-PSVFYVPDFILEADEQQILARTYPTNVDRDAGNEWVSLRSRRLKCWGGKPGEKFCPEPLPPWVEALCDSLVARGVFAEENRPNHVLLNEYQPGQGIMAHTDGPYYEPRTATLSLGSDAVMHFSPRLAAADVGRPGVEYRPQSSLVLRARCLVVFADDAYSRQLHGIDAVREEMVGSSSXXXXXXXAPVINAEAANAPEGTVLRRK-LRVSLTFRRI 936
            P F     RP +++    V     +V Y+P+++ E +E  I+A+TY      D+   WV+LR RRL+CWGG+P      EPLPPW++ L + LV  G+F  E  PNHVLLNEY+ G+GIMAHTDG +Y P+TATLSLG  AVM F+PR+    VG   V+ RP + +VLR R LVVF ++AY   LH I A   + VG++        APV N E+A A  G V+ R  +R+SLTFR I
Sbjct:   77 PPFDRWTSRPRVKLTDYDVDSKLKTVSYLPEWVAEDEEAAIMAQTYAVP---DSHPSWVTLRGRRLQCWGGEPRRDSAAEPLPPWLQRLSEGLVEAGIFPAEVAPNHVLLNEYKAGEGIMAHTDGDFYHPQTATLSLGGTAVMTFAPRVQPRAVGL--VDGRPVAEVVLRPRSLVVFREEAYLDHLHAIAASHSDEVGAA--------APVANLESAGARLGEVIARPAVRLSLTFRHI 302          
BLAST of mRNA_P-fluviatile_contig14.2072.1 vs. uniprot
Match: A0A4D9DGD1_9STRA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DGD1_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.440e-50
Identity = 111/276 (40.22%), Postives = 152/276 (55.07%), Query Frame = 1
Query:  139 PKAADPAATCSSRSAVTLKGDSIQ---RGEVSP-WFGELARRPFLEMEKMRVGDTPSVFYVPDFILEADEQQILARTYPTNVDRDAGNEWVSLRSRRLKCWGGKPGEK---FCPEPLPPWVEALCDSLVARGVFAEENRPNHVLLNEYQPGQGIMAHTDGPYYEPRTATLSLGSDAVMHFSPRLAAADVGRPGVEYRPQSSLVLRARCLVVFADDAYSRQLHGIDAVREEMVGSSSXXXXXXXAPVINAEAANAP--EGTVLRRKLRVSLTFRRIR 939
            P+  D     ++ + V  +G+ ++   R  ++P +         L    MR G    VFYVP++I +  EQ+I+   +   V     N+WV LR RRL+C+GGKP E    F  E LPPW+  +C +L+  GVF EE  PNHVLLNEY+PGQGIMAH DGP+Y  R A +SLG  A+  F  RL A ++     E  P  ++VL  R L+VF  +AY   LH I AV EE+VG +         PV+N E        G  L+R LR+SLT RR++
Sbjct:   78 PEDGDMDIMVTAAAKVVEEGEQVRHCLRARLNPEYLTRATTERDLSKHAMR-GPPDGVFYVPEYISKEMEQEIMEVAHSMPV-----NQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESGPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVGGTEGT-----TPVLNLERLEGRINVGDRLKRALRLSLTCRRVK 342          
BLAST of mRNA_P-fluviatile_contig14.2072.1 vs. uniprot
Match: A0A7S2G3H8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3H8_9STRA)

HSP 1 Score: 174 bits (440), Expect = 8.920e-48
Identity = 89/184 (48.37%), Postives = 118/184 (64.13%), Query Frame = 1
Query:  394 WVSLRSRRLKCWGGKPGE--KFCPEPLPPWVEALCDSLVARGVFAEENRPNHVLLNEYQPGQGIMAHTDGPYYEPRTATLSLGSDAVMHFSPRLAAADVGRPGVEYRPQSSLVLRARCLVVFADDAYSRQLHGIDAVREEMVGSSSXXXXXXXAPVINAEAANAPEGTVLRRK-LRVSLTFRRI 936
            W+SL  RR++CWGG+P E  KF PEPLPPW+  +C +LV  GVF  E RPNHVL+NEY  G+GI+ H+DGP Y P+TATLSLG  A+M F PR+++ D+G   V   P   ++LR R LVVF D AY   +H I + + + VGS         A  IN   + A  G +++R  +RVSLTFR +
Sbjct:   16 WISLSGRRVQCWGGQPNERTKFVPEPLPPWLVDICTALVDAGVFPSEVRPNHVLINEYANGEGILPHSDGPMYFPKTATLSLGGSAIMTFEPRISSGDIGE--VSSDPICEVILRPRSLVVFEDAAYIDYMHAIASRQTDQVGSR--------AVPINLALSGARHGEMVQRPAIRVSLTFRHV 189          
BLAST of mRNA_P-fluviatile_contig14.2072.1 vs. uniprot
Match: A0A6A3DJB9_9STRA (Fe2OG dioxygenase domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DJB9_9STRA)

HSP 1 Score: 158 bits (399), Expect = 4.790e-41
Identity = 88/250 (35.20%), Postives = 131/250 (52.40%), Query Frame = 1
Query:   70 LDFRGLLKQERERERERTLRQDPPKAADPAATCSSRSAVTLKGDSIQRGEVSPWFGELARRPFLEMEKMRVGDTPSVFYVPDFILEADEQQILARTYPTNVDRDAGNEWVSLRSRRLKCWGGKPGEKFCPEPLPPWVEALCDSLVARGVFAEENRPNHVLLNEYQPGQGIMAHTDGPYYEPRTATLSLGSDAVMHFSPRLAAADVGRPGV-------EYRPQSSLVLRARCLVVFADDAYSRQLHGIDAV 798
            +DFR LL++ER R RE T  Q      +P    ++ +    K   +Q   +  W    A+R  +++++ R G  P V+Y+P++I + +E+ IL R Y    D D    WV L+ RRL+ WGG+    F P+PLP W+  +  +LV  G+F+EE +PNH L+NEY  G  IM H DGP Y P  + +S G++  + F P  A A              E  P     L  R L++F  +AY+R LH ID +
Sbjct:    1 MDFRQLLREERRRAREATQSQK----TEPQGATTTSTEDEEKAMQLQAATLKVW----AKRVKIDIDEFRRGPIPGVYYIPNWITQDEEEAILERVYAVPDDSDL---WVRLKHRRLQMWGGEVKAPFDPKPLPRWLMQISQTLVDAGIFSEEKKPNHALINEYGVGDCIMPHEDGPAYYPFVSIISTGAECRVTFEPHRALASTDSTAESSSATVSEVVPHFDFQLERRSLLLFTGEAYTRYLHSIDNI 239          
BLAST of mRNA_P-fluviatile_contig14.2072.1 vs. uniprot
Match: A0A8K1CCV7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCV7_PYTOL)

HSP 1 Score: 156 bits (394), Expect = 2.300e-40
Identity = 90/244 (36.89%), Postives = 131/244 (53.69%), Query Frame = 1
Query:   70 LDFRGLLKQERERERERTLRQDPPKAADPAATCSSRSAVTLKGDSIQRGEVSPWFGELARRPFLEMEKMRVGDTPSVFYVPDFILEADEQQILARTYPTNVDRDAGNEWVSLRSRRLKCWGGKPGEKFCPEPLPPWVEALCDSLVARGVFAEENRPNHVLLNEYQPGQGIMAHTDGPYYEPRTATLSLGSDAVMHFSP-RLAAADVGRPGVEYRPQSSLVLRARCLVVFADDAYSRQLHGIDAV 798
            +DFR LL++ER+R  +R  + D   A       +S      + + +    ++ W      RP L++ + RV    SV+YVP+++ + +E  IL R Y           WVSL+ RRL+ +GG+    F PEPLP W+  +   LV  GVF E  RPNH L+NEY  G+GIM H DGP Y P  A +S G+DA + F+P R   A+          + S ++R R L++F +DAY+  LH ID V
Sbjct:    1 MDFRRLLREERQRALQRKSQGDETAAPTENEESASNDEKAAEAE-LSNEPLTGW----RIRPQLDLTQFRVDGIRSVYYVPEWLTQEEEDAILGRVYGAPATM-----WVSLKRRRLQMYGGQVKAPFSPEPLPLWLTQIASGLVDAGVFVEATRPNHALINEYGVGEGIMPHEDGPAYHPMVAIISTGADARVTFAPHRKWTAETPDVPDTALTEVSFMVRRRSLLLFTEDAYTEYLHSIDGV 234          
BLAST of mRNA_P-fluviatile_contig14.2072.1 vs. uniprot
Match: A0A226EQ42_FOLCA (Alpha-ketoglutarate-dependent dioxygenase alkB 6 n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226EQ42_FOLCA)

HSP 1 Score: 152 bits (384), Expect = 2.830e-39
Identity = 85/217 (39.17%), Postives = 120/217 (55.30%), Query Frame = 1
Query:  283 GDTPSVFYVPDFILEADEQQILARTYPTNVDRDAGNEWVSLRSRRLKCWGGKPGEK-FCPEPLPPWVEALCDSLVARGVFAEENRPNHVLLNEYQPGQGIMAHTDGPYYEPRTATLSLGSDAVMHFSPRLAAADVGRPGVEYRPQSSLVLRARCLVVFADDAYSRQLHGIDAVREEMVGSSSXXXXXXXAPVINAEAANAPEGTVLRRKLRVSLTFR 930
            G  PS+FYVP+FI E DE  +LA+ Y     +     W  L +RRL+ WGG P  +    E LPPW++   D +    +F     PNHVL+NEY+PGQGIM H DG  + P   T++LGS ++++F   L+      P  + R + SL+L  R L+V  D+ Y+  LHGID   +++V  S          VIN+++A+   G  L R  RVSLT R
Sbjct:   10 GGPPSIFYVPNFISEEDETVLLAKIYQAPKPK-----WTVLTNRRLQNWGGLPHPRGMIAEKLPPWLKKYVDDIAELNLF-NGKLPNHVLVNEYRPGQGIMPHLDGSLFHPTITTINLGSHSIINFYTPLSNVSKEVPDYKQRLRFSLMLEPRSLLVLQDECYNNYLHGIDETTKDVVSES----------VINSKSAHVTVGQELDRGTRVSLTIR 210          
BLAST of mRNA_P-fluviatile_contig14.2072.1 vs. uniprot
Match: A0A7S0PB53_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PB53_CAFRO)

HSP 1 Score: 155 bits (391), Expect = 3.270e-39
Identity = 91/193 (47.15%), Postives = 114/193 (59.07%), Query Frame = 1
Query:  379 DAGNEWVSLRSRRLKCWGGKP--GEKFCP-EPLPPWVEALCDSLVARGVFAEENRPNHVLLNEYQPGQGIMAHTDGPYYEPRTATLSLGSDAVMHFSPRLAAADVGRPG---VEYRPQSSLVLRARCLVVFADDAYSRQLHGIDAVREEMVGSSSXXXXXXXAPVINAEAANAPEGTVL-RRKLRVSLTFRRI 936
            +A   WV LR RRL  +GG P  G +    EPLPPW+ A+ D LVA G F E+ RPNHVL+N Y PG+GI+ HTDGP Y P TATLSLGSDAVM F+PR+ +  VG      +E        L  R LVVF+D+AY+  LH + AV E  V           A  +NA +    EG+++ R  LRVSLT R +
Sbjct:  123 EASGRWVRLRGRRLLQFGGTPMPGPRLLGREPLPPWLGAVVDRLVATGAFPEDKRPNHVLVNAYGPGEGILPHTDGPLYFPCTATLSLGSDAVMRFAPRVPSELVGTSSQSHLEAAKSFDAGLARRSLVVFSDEAYTSALHDVAAVGEHRV----------TAKCLNAASLGWAEGSLIPRAPLRVSLTMRHV 305          
BLAST of mRNA_P-fluviatile_contig14.2072.1 vs. uniprot
Match: A0A2R5GWX9_9STRA (Alpha-ketoglutarate-dependent dioxygenase alkB-like 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWX9_9STRA)

HSP 1 Score: 153 bits (386), Expect = 7.510e-39
Identity = 88/211 (41.71%), Postives = 117/211 (55.45%), Query Frame = 1
Query:  298 VFYVPDFILEADEQQILARTYPTNVDRDAGNEWVSLRSRRLKCWGGKPGEKFCPEPLPPWVEALCDSLVARGVFAEENRPNHVLLNEYQPGQGIMAHTDGPYYEPRTATLSLGSDAVMHFSPRLAAADVGRPGVEYRPQSSLVLRARCLVVFADDAYSRQLHGIDAVREEMVGSSSXXXXXXXAPVINAEAANAPEGTVLRRKLRVSLTFR 930
            V+Y+P+F    +   +L +TY           W  +RSRRL+C+         PE +PPW++ L  SLV  G+F+   RPNH LLNEY+PGQGI+ HTDGP Y    A +SLGS A   F+ RL   ++G    E R  ++L+L+ R LVVFA DAY   LH + A+ EE+V           A V N EAA A  G  + R  RVS+T R
Sbjct:   92 VWYIPNFCTVEEHDDMLEQTYSKAAS------WKDIRSRRLQCYRE-------PE-MPPWLDTLASSLVQAGIFSPAQRPNHALLNEYEPGQGILGHTDGPVYHSLVACISLGSPATFRFTERLLTDEIGVR--EARELATLLLQPRSLVVFAADAYREALHSVPALLEEVVS----------ADVANIEAAQASVGDRIPRTTRVSITMR 276          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2072.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNG9_ECTSI2.410e-11760.83Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A835ZDT2_9STRA1.190e-5346.06Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S2G6U9_9STRA7.840e-5346.03Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A4D9DGD1_9STRA1.440e-5040.22Fe2OG dioxygenase domain-containing protein n=2 Ta... [more]
A0A7S2G3H8_9STRA8.920e-4848.37Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6A3DJB9_9STRA4.790e-4135.20Fe2OG dioxygenase domain-containing protein n=3 Ta... [more]
A0A8K1CCV7_PYTOL2.300e-4036.89Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A226EQ42_FOLCA2.830e-3939.17Alpha-ketoglutarate-dependent dioxygenase alkB 6 n... [more]
A0A7S0PB53_CAFRO3.270e-3947.15Hypothetical protein n=1 Tax=Cafeteria roenbergens... [more]
A0A2R5GWX9_9STRA7.510e-3941.71Alpha-ketoglutarate-dependent dioxygenase alkB-lik... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:695840..699029 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score361.7
Seed ortholog evalue3.7e-97
Seed eggNOG ortholog2880.D7FNG9
KEGG koko:K10768
EggNOG free text desc.ferrous iron binding
EggNOG OGsKOG3200@1,KOG3200@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAlpha-ketoglutarate-dependent dioxygenase AlkB-like
Ec32 orthologEc-01_005500.1
Exons3
Model size1624
Cds size993
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2072.1prot_P-fluviatile_contig14.2072.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 696411..698969 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815602.1392078-UTR-P-fluviatile_contig14:695839..6964101622815602.1392078-UTR-P-fluviatile_contig14:695839..696410Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 695840..696410 -
1693562389.0208633-UTR-P-fluviatile_contig14:695839..6964101693562389.0208633-UTR-P-fluviatile_contig14:695839..696410Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 695840..696410 -
1622815602.1889105-UTR-P-fluviatile_contig14:698969..6990291622815602.1889105-UTR-P-fluviatile_contig14:698969..699029Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 698970..699029 -
1693562389.065208-UTR-P-fluviatile_contig14:698969..6990291693562389.065208-UTR-P-fluviatile_contig14:698969..699029Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 698970..699029 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815602.1512055-CDS-P-fluviatile_contig14:696410..6969071622815602.1512055-CDS-P-fluviatile_contig14:696410..696907Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 696411..696907 -
1693562389.0326362-CDS-P-fluviatile_contig14:696410..6969071693562389.0326362-CDS-P-fluviatile_contig14:696410..696907Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 696411..696907 -
1622815602.1619842-CDS-P-fluviatile_contig14:697159..6974421622815602.1619842-CDS-P-fluviatile_contig14:697159..697442Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 697160..697442 -
1693562389.042343-CDS-P-fluviatile_contig14:697159..6974421693562389.042343-CDS-P-fluviatile_contig14:697159..697442Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 697160..697442 -
1622815602.1783297-CDS-P-fluviatile_contig14:698756..6989691622815602.1783297-CDS-P-fluviatile_contig14:698756..698969Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 698757..698969 -
1693562389.0532596-CDS-P-fluviatile_contig14:698756..6989691693562389.0532596-CDS-P-fluviatile_contig14:698756..698969Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 698757..698969 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.2072.1

>prot_P-fluviatile_contig14.2072.1 ID=prot_P-fluviatile_contig14.2072.1|Name=mRNA_P-fluviatile_contig14.2072.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=331bp
MTTLDFRGLLKQERERERERTLRQDPPKAADPAATCSSRSAVTLKGDSIQ
RGEVSPWFGELARRPFLEMEKMRVGDTPSVFYVPDFILEADEQQILARTY
PTNVDRDAGNEWVSLRSRRLKCWGGKPGEKFCPEPLPPWVEALCDSLVAR
GVFAEENRPNHVLLNEYQPGQGIMAHTDGPYYEPRTATLSLGSDAVMHFS
PRLAAADVGRPGVEYRPQSSLVLRARCLVVFADDAYSRQLHGIDAVREEM
VGSSSGGGSGGGAPVINAEAANAPEGTVLRRKLRVSLTFRRIRTGDAMHM
AGAEPKTLTLTQVRGRGGTVDSTASLGSKS*
back to top

mRNA from alignment at P-fluviatile_contig14:695840..699029-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.2072.1 ID=mRNA_P-fluviatile_contig14.2072.1|Name=mRNA_P-fluviatile_contig14.2072.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3190bp|location=Sequence derived from alignment at P-fluviatile_contig14:695840..699029- (Porterinema fluviatile SAG_2381)
CTGCGCCTTGCGTCTCTGCTTGCCGCCGTGGGCAGTCTACATCACGTTTA CTCGAGTATCATGACAACCCTTGACTTTCGCGGCCTACTGAAGCAAGAAC GAGAGCGAGAGAGAGAAAGGACGCTGCGACAGGATCCCCCCAAAGCTGCA GACCCTGCCGCGACTTGCTCATCTCGAAGTGCTGTGACTCTAAAGGGAGA TAGTATTCAGCGAGGAGAGGTGTCACCGTGGTTCGGGGAGCTTGCGAGGC GGCCATTCCTTGAGATGGAGAAGGCGAGATTGGCGTTTACTCCTTGCACG AAACACTGCATTATTTTGAGGATCGACAGCCGAAAGAGAGGGTGCACGAA CGAACCTGGAACGGACGTTCGACGGAGCTCTCAAAAGCTGTTATAGACTA GACAATGTGTGCATCTGGGCGACTGCAGACGGCCGCAGGGGCGGGTATCC CAAGCTCGACTTTGATTTTGTCTTTATTCCAGGTGGATGAGAACTGTAAC GATGGGCACTGACTTCTTTTCACCCGACATCGACGGTGTCCTTGTGAGAC TCCCCACATCATTGAGCTTCGTTGGATGCAACATTAGTCTGCGCTTAACC TGGTTGCTGGTTTCCTAGTTTGCGCGGGAAACACAGGGCATCCTCCAAAA TGAAACGTACACACGCGTACACACGCACATCCAAAGTCAAGAACTTGTGC GCTGTGCTTCACGGGTCCCCCGAGCAAGTGATGCGGCAGGAGAGCCATCG CGCTGCCGGCAGTGGCGGCGCCCATGACCTTCAGGGTGTTTTTGTCGTCC TCTGTAACTGCCATGAGTGGAGCGCGGCATACACCTCGGACTTTAGTTGG CGTCCCCCGGGCTCGACTCATGGAGTGCGTTGAAGACTGCGAGGAGATCA TTAAGGCAGTGAGAGCCCCAATTGCCGTGGACGCGATTGCTTTCCCAGCC GGATAAGGTGCCAGGGGCGCAGTGAAGCACAGCGCACGCGTTCTTTGACT TTGAATCGGGCGTGTGTGTTTCCGGTGGGGGCATTCTCGGTGTTTTGTCA CGGGCAAAGCGGTAAACCGTGTGAAGTTTAGACTACTCACCACGCTCAGC TCTTCCTCAGACGCGCACAGACGAATGCGTGTAACGATGTAAGAAAACCA GATCCAAAACGCTCGAAGCGTCAAGGACATTACATGAAGATTGTACGAAA AAGTTCGAAATATGCAAAAATTCCATCAGAGGCCCGGCTTTGAAACAATT TCTACAGAGATCTTGCGATTGGACTCCTGGTTGGAGTTGTATCCAGTGCA ATCTTGGTAGACCGGGAACCTGCAGCGTGTTGTGGAATGACGTGGAATCG GACCGGGTACCCGGCGGGTATGCTTGTGATTCACTGCGATGCGTACGAGG ATATGCTCTCGAACAAATCTCTAGCAAAGCTTCCACAAAACCAGTGTCGA CGGCGGGCGGCGTCTGCGCCACACTTTCATTTGATGAAGGAGCACCCAAT TCAATGGACAGCAGTAATCATCTCCGATCCCCTCCGCGAGTCCACATACT AAATAGCTGGGACGCCGAAAAATGACGCCGCCCGCAGATGCGAGTGGGCG ACACGCCCTCCGTATTCTACGTTCCTGATTTCATCTTGGAGGCGGACGAG CAACAAATCCTGGCGCGGACATACCCTACGAATGTTGACAGGGACGCGGG CAATGAGTGGGTCTCGCTGAGGTCGCGCCGGTTGAAATGCTGGGGGGGGA AGCCTGGGGAGAAATTCTGCCCGGAGCCCCTGCCACCGTGGGTGGAGGCG CTGTGCGACTCGCTCGTAGCCCGCGGTGTTTTCGCCGAGGAGAATCGACC GAACCATGTTCTGCTCAACGGTGAGGATAAGGATGTTGTGGCGAGAGGAA CAAGCGTTCGTCGTGAATTTCAAAACGTTGTTGTCGCGGGCGCCGCCGTC ATCGTATCCCGAGGGAAGTCGCCGACGCTGTCCACCAGCATTCCTCTGTA CCGTGAACCATTAATAAATTTCGTGCGCCACACCCCGTTTCGCCCCGCTC CATATCCTAAGTCAAATCGCCGCATCTCCGCTTCCTCGTGTGCCTTGACT CGGACGCGCAATCTCTTTCCAGAGTATCAGCCGGGCCAGGGCATCATGGC CCACACCGATGGGCCCTACTACGAGCCGCGCACAGCCACCCTCAGCCTGG GGAGCGACGCCGTGATGCACTTCTCTCCCCGGCTGGCGGCCGCGGACGTA GGGCGGCCGGGGGTGGAGTACCGACCGCAGTCGTCCCTGGTGTTGAGAGC GCGCTGCTTGGTGGTCTTCGCCGACGATGCATACTCCAGGCAGCTGCACG GCATCGACGCGGTAAGGGAGGAAATGGTGGGCAGCAGCAGCGGCGGCGGC AGCGGCGGCGGCGCCCCCGTCATCAACGCGGAGGCGGCGAACGCGCCGGA GGGGACCGTGCTCAGACGAAAGCTGAGGGTGTCGCTCACCTTCAGGAGGA TCAGAACCGGTGATGCAATGCATATGGCAGGGGCCGAGCCAAAAACCCTG ACGCTAACGCAAGTGCGAGGCAGAGGAGGCACAGTTGACAGCACAGCTTC CCTCGGGTCAAAATCTTGATAACCGGCCTAATAGTCTGTTCACCACTTGC TGGGTTGCACAAAACTTCGGGGCTTTTTGCAATGTAGTCGTTTGACGATG CCGGAGATGGCTTACGTAGATACGGCGGAGTCACACCATACAGCCACTCG CGGCCAGAGTATTGTGATAGTTTTCGTATATGCGAAGGCAACGGCGCGGT GGGGCAGTGTCACGCATCCTTTGTGGTAGTCTGTACGTCATGGGAAAAGC AGGATTTTTGCGACGAGTGCGGCGTTGGAGTCAACAGGTCTCGGGCATTT TGTGGGCGGGCACTTGATCGACGCATGGTGTTGTAACATATTCCTCATGT GCTCATCGAAATTGTCGGCGTTCGGCACGCCGACTTTCTTGGAAAAATGA CCCACAGTTCGATTGGAAGGACGAGTTCGTTCAAGCCGGCCATGGTTGCG GAGGAGTGATCAGGTGAAAGTTTGGGGAAATAGATATGGCTGGTTGAAAG CGGATCCCTTCGAAAGGCAAGCCCGTGGTATGCGTGTTGTGGGCAGCCAT CACCGGGAGACTCAGCTGGGAGGGAATTGAGCGATTTCCT
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig14:695840..699029-

>mRNA_P-fluviatile_contig14.2072.1 ID=mRNA_P-fluviatile_contig14.2072.1|Name=mRNA_P-fluviatile_contig14.2072.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1986bp|location=Sequence derived from alignment at P-fluviatile_contig14:695840..699029- (Porterinema fluviatile SAG_2381)
ATGACAACCCTTGACTTTCGCGGCCTACTGAAGCAAGAACGAGAGCGAGA
GAGAGAAAGGACGCTGCGACAGGATCCCCCCAAAGCTGCAGACCCTGCCG
CGACTTGCTCATCTCGAAGTGCTGTGACTCTAAAGGGAGATAGTATTCAG
CGAGGAGAGGTGTCACCGTGGTTCGGGGAGCTTGCGAGGCGGCCATTCCT
TGAGATGGAGAAGATGACAACCCTTGACTTTCGCGGCCTACTGAAGCAAG
AACGAGAGCGAGAGAGAGAAAGGACGCTGCGACAGGATCCCCCCAAAGCT
GCAGACCCTGCCGCGACTTGCTCATCTCGAAGTGCTGTGACTCTAAAGGG
AGATAGTATTCAGCGAGGAGAGGTGTCACCGTGGTTCGGGGAGCTTGCGA
GGCGGCCATTCCTTGAGATGGAGAAGATGCGAGTGGGCGACACGCCCTCC
GTATTCTACGTTCCTGATTTCATCTTGGAGGCGGACGAGCAACAAATCCT
GGCGCGGACATACCCTACGAATGTTGACAGGGACGCGGGCAATGAGTGGG
TCTCGCTGAGGTCGCGCCGGTTGAAATGCTGGGGGGGGAAGCCTGGGGAG
AAATTCTGCCCGGAGCCCCTGCCACCGTGGGTGGAGGCGCTGTGCGACTC
GCTCGTAGCCCGCGGTGTTTTCGCCGAGGAGAATCGACCGAACCATGTTC
TGCTCAACGATGCGAGTGGGCGACACGCCCTCCGTATTCTACGTTCCTGA
TTTCATCTTGGAGGCGGACGAGCAACAAATCCTGGCGCGGACATACCCTA
CGAATGTTGACAGGGACGCGGGCAATGAGTGGGTCTCGCTGAGGTCGCGC
CGGTTGAAATGCTGGGGGGGGAAGCCTGGGGAGAAATTCTGCCCGGAGCC
CCTGCCACCGTGGGTGGAGGCGCTGTGCGACTCGCTCGTAGCCCGCGGTG
TTTTCGCCGAGGAGAATCGACCGAACCATGTTCTGCTCAACGAGTATCAG
CCGGGCCAGGGCATCATGGCCCACACCGATGGGCCCTACTACGAGCCGCG
CACAGCCACCCTCAGCCTGGGGAGCGACGCCGTGATGCACTTCTCTCCCC
GGCTGGCGGCCGCGGACGTAGGGCGGCCGGGGGTGGAGTACCGACCGCAG
TCGTCCCTGGTGTTGAGAGCGCGCTGCTTGGTGGTCTTCGCCGACGATGC
ATACTCCAGGCAGCTGCACGGCATCGACGCGGTAAGGGAGGAAATGGTGG
GCAGCAGCAGCGGCGGCGGCAGCGGCGGCGGCGCCCCCGTCATCAACGCG
GAGGCGGCGAACGCGCCGGAGGGGACCGTGCTCAGACGAAAGCTGAGGGT
GTCGCTCACCTTCAGGAGGATCAGAACCGGTGATGCAATGCATATGGCAG
GGGCCGAGCCAAAAACCCTGACGCTAACGCAAGTGCGAGGCAGAGGAGGC
ACAGTTGACAGCACAGCTTCCCTCGGGTCAAAATCTTGAAGTATCAGCCG
GGCCAGGGCATCATGGCCCACACCGATGGGCCCTACTACGAGCCGCGCAC
AGCCACCCTCAGCCTGGGGAGCGACGCCGTGATGCACTTCTCTCCCCGGC
TGGCGGCCGCGGACGTAGGGCGGCCGGGGGTGGAGTACCGACCGCAGTCG
TCCCTGGTGTTGAGAGCGCGCTGCTTGGTGGTCTTCGCCGACGATGCATA
CTCCAGGCAGCTGCACGGCATCGACGCGGTAAGGGAGGAAATGGTGGGCA
GCAGCAGCGGCGGCGGCAGCGGCGGCGGCGCCCCCGTCATCAACGCGGAG
GCGGCGAACGCGCCGGAGGGGACCGTGCTCAGACGAAAGCTGAGGGTGTC
GCTCACCTTCAGGAGGATCAGAACCGGTGATGCAATGCATATGGCAGGGG
CCGAGCCAAAAACCCTGACGCTAACGCAAGTGCGAGGCAGAGGAGGCACA
GTTGACAGCACAGCTTCCCTCGGGTCAAAATCTTGA
back to top