mRNA_P-fluviatile_contig14.2070.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2070.1 vs. uniprot
Match: D7FNH1_ECTSI (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH1_ECTSI) HSP 1 Score: 437 bits (1124), Expect = 2.170e-149 Identity = 226/248 (91.13%), Postives = 242/248 (97.58%), Query Frame = 1
Query: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTDGGVHVLDGAKSLPHDVVQMLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEARGFDVAEYFDTVPELADRAFNRPRKETLETAQIAGVTNRKQLRRVLKKRDASYSELVQRLERAEKMKKAEEHLEAQRTVMNSKGTKRKVREAKDGRPAVFRWKQERSR 744
MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKT+GGVHVLDGA++LPHDVVQ+LKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEA+ FDVA++FDTVPELADRAFNRPRK+TLE AQ+ G TNR+QL++VLKKRDASYSEL+QRLERAEKMKKAE HLEAQR VMNSKGTKRKV+EAKDGRPAV+RWK+ERSR
Sbjct: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAETLPHDVVQLLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEAKEFDVAKHFDTVPELADRAFNRPRKDTLEKAQVTGATNRRQLKKVLKKRDASYSELMQRLERAEKMKKAEVHLEAQRKVMNSKGTKRKVQEAKDGRPAVYRWKKERSR 248
BLAST of mRNA_P-fluviatile_contig14.2070.1 vs. uniprot
Match: A0A836CK24_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK24_9STRA) HSP 1 Score: 280 bits (717), Expect = 5.280e-88 Identity = 141/248 (56.85%), Postives = 186/248 (75.00%), Query Frame = 1
Query: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTDGGVHVLDGAKSLPHDVVQMLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEARGFDVAEYFDTVPELADRAFNRPRKETLETAQIAGVTNRKQLRRVLKKRDASYSELVQRLERAEKMKKAEEHLEAQRTVMNSKGTKRKVREAKDGRPAVFRWKQERSR 744
MSSLRNAVKR HKERAQPASR K GLLEKH DYVLRAR+Y KRDR+ AL+LKA+++NPDEFYF MH+ KT GVH ++G+ SL H+ MLKTQD+ Y+ R+ D +KA +L+ LHML+A P+N HT+F ++++ R FD AEYFDT PELA R FNRPR TLE+ Q+ G +R L++ LK+RDA+Y E+ R ERA KM +A HL AQR +M ++GT KV+ A+ G+P V++WK++R++
Sbjct: 1 MSSLRNAVKRKTHKERAQPASRSKFGLLEKHSDYVLRARDYNAKRDRLNALRLKASLRNPDEFYFGMHKAKTKEGVHQVEGSSSLDHETAHMLKTQDMAYIHMKRAVDIKKAERLKAGLHMLDAPPQNTHTVFVKNKRQRRAFDAAEYFDTAPELAGRTFNRPRMATLESKQVLGAESRADLKKALKQRDAAYQEVEAREERARKMTRAAAHLAAQRALMTARGTVTKVKGAEKGQPPVYKWKRQRAK 248
BLAST of mRNA_P-fluviatile_contig14.2070.1 vs. uniprot
Match: A0A8K1CCZ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCZ2_PYTOL) HSP 1 Score: 248 bits (634), Expect = 1.310e-75 Identity = 135/248 (54.44%), Postives = 179/248 (72.18%), Query Frame = 1
Query: 7 SLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTDGGVHVLDG--AKSLPHDVVQMLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEARGFDVAEYFDTVPELADRAFNRPRKETLETAQIAGVTNRKQLRRVLKKRDASYSELVQRLERAEKMKKAEEHLEAQRTVMNSKGTKRKVREAKDGRPAVFRWKQERSR 744
SLRN VKR EHKER Q R+KLGLLEKHKDYVLRAR+Y KK+DR++ +KLKAA +NPDEFYF M+ +T+ GVHV + ++ L + +++LKTQDL Y+ R+ D RKA KL + LH ++A NKHT+F DS ++ FDVA +FDT PELADRAFNR RKETL+T I T++KQLR + K+RDA Y EL RL RA K+++ + L+ +R V +KG KRKV++ RP V++WK+ER +
Sbjct: 2 SLRNVVKRREHKERGQLQERKKLGLLEKHKDYVLRARDYNKKQDRLRTMKLKAAFRNPDEFYFKMNTTRTEDGVHVSENNHSEKLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLTQGLHFIDAPKNNKHTVFVDSSEDLNTFDVATHFDTAPELADRAFNRLRKETLKTTTIQATTDKKQLRALTKERDAVYRELNDRLIRATKIQQMSDRLDLERKVQ-AKGKKRKVQDGDSSRPPVYKWKKERQK 248
BLAST of mRNA_P-fluviatile_contig14.2070.1 vs. uniprot
Match: K3WAT9_GLOUD (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAT9_GLOUD) HSP 1 Score: 241 bits (614), Expect = 1.320e-72 Identity = 133/251 (52.99%), Postives = 181/251 (72.11%), Query Frame = 1
Query: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTDGGVHVL--DGAKSLPHDVVQMLKTQDLGYVSTHRSADERKAAKLRESLHMLEA-GPRNKHTIFFDSEKEARGFDVAEYFDTVPELADRAFNRPRKETLETAQIAGVTNRKQLRRVLKKRDASYSELVQRLERAEKMKKAEEHLEAQRTVMNSKGTKRKVREAKDGRPAVFRWKQERSR 744
MSSLRN VKR EHKER Q R+KLGLLEKHKDYV RAR+Y KK+D ++AL +KAA +NPDEFYF M+ +T+ GVHV + K L + +++LKTQDL Y+ R+ D RKA KL E LH ++A G NKH +F DS+ E FDVA++FDTVPE+ADRAFNR RK+TL+T + V ++K L+++ +RDA Y EL RL+RA + + L+ +R V +KG K K+++A+DG+PAV+RWK++R +
Sbjct: 1 MSSLRNVVKRREHKERGQLRERKKLGLLEKHKDYVKRARDYNKKQDHLKALAVKAAFRNPDEFYFRMNSTRTEDGVHVSTHNHHKQLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLNEGLHFIDAAGKDNKHVVFVDSKDEVESFDVAKHFDTVPEIADRAFNRLRKDTLKTVSLPAVQDKKTLKKLGIERDAVYRELNDRLQRASTIDRMRAKLDLERKVQ-AKGKKMKIKDAEDGQPAVYRWKKQRQK 250
BLAST of mRNA_P-fluviatile_contig14.2070.1 vs. uniprot
Match: A0A5D6XJY8_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJY8_9STRA) HSP 1 Score: 238 bits (607), Expect = 1.450e-71 Identity = 127/248 (51.21%), Postives = 175/248 (70.56%), Query Frame = 1
Query: 7 SLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTDGGVHVLDG----AKSLPHDVVQMLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEARGFDVAEYFDTVPELADRAFNRPRKETLETAQIAGVTNRKQLRRVLKKRDASYSELVQRLERAEKMKKAEEHLEAQRTVMNSKGTKRKVREAKDGRPAVFRWKQER 738
SLRN VKR EHKER QP R+KLGLLEKHKDYV RAR+Y K+DR++ ++LKAA +NPDEFYF M+ +T+GGVHV D K+L D +++LKTQD+ Y+ R+ D RKA KL LH ++A NKH +F DSE + FDVA +FDT PELADRAFNR R + L+T + V++ K++++ ++RD Y EL RLERA + + L+ +R V +KG K K+++A++G+PAV+RWK++R
Sbjct: 2 SLRNVVKRREHKERGQPQERKKLGLLEKHKDYVKRARDYNSKQDRLRTMQLKAAFRNPDEFYFRMNATRTEGGVHVSDNNRLDGKALTADALKVLKTQDVAYLHLKRAVDMRKAEKLNAGLHFIDAPTANKHVVFVDSEAQLAKFDVAAHFDTAPELADRAFNRVRMDALKTLALPAVSSAKEIKKRNRERDGVYRELSDRLERAATLDRMRAKLDLERKVQ-AKGKKMKIKDAENGQPAVYRWKKQR 248
BLAST of mRNA_P-fluviatile_contig14.2070.1 vs. uniprot
Match: A0A0P1B0R4_PLAHL (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0R4_PLAHL) HSP 1 Score: 234 bits (597), Expect = 4.430e-70 Identity = 132/251 (52.59%), Postives = 176/251 (70.12%), Query Frame = 1
Query: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTDGGVHVL--DGAKSLPHDVVQMLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEARGFDVAEYFDTVPELADRAFNRPRKETLETAQIAGVT-NRKQLRRVLKKRDASYSELVQRLERAEKMKKAEEHLEAQRTVMNSKGTKRKVREAKDGRPAVFRWKQERSR 744
MSSLRN VKR EHKER Q RRKLGLLEKHKDYV RA++Y K+ R++ L+LKAA++NPDEFY MH KT+GGVH+ + KSL + ++ LKTQDL Y+ R+ D RKA +L LH ++A NKHT+F D +++ FDVA+YFDTVPELADRAFNR R+ LE ++ + + KQ ++ +RDA Y EL RL RA+K+ + L+ +R V +KG KRKV+ A++G PAV+RWKQ+R +
Sbjct: 1 MSSLRNVVKRREHKERGQLRDRRKLGLLEKHKDYVKRAQDYNSKQKRLKMLQLKAALRNPDEFYHRMHNNKTEGGVHISTHNHLKSLSTEALRTLKTQDLAYLHLKRAVDLRKAERLNRGLHFVDAPKDNKHTVFVDDKEQVENFDVAQYFDTVPELADRAFNRIRRRDLEMVELPDMAASPKQKYKMQVERDALYRELRDRLTRAKKIGQMSAKLDLERKVQ-AKGRKRKVKAAENGMPAVYRWKQQRQK 250
BLAST of mRNA_P-fluviatile_contig14.2070.1 vs. uniprot
Match: D0NVW8_PHYIT (U3 small nucleolar RNA-associated protein 11 n=14 Tax=Phytophthora TaxID=4783 RepID=D0NVW8_PHYIT) HSP 1 Score: 232 bits (591), Expect = 3.440e-69 Identity = 132/251 (52.59%), Postives = 173/251 (68.92%), Query Frame = 1
Query: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTDGGVHVL--DGAKSLPHDVVQMLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEARGFDVAEYFDTVPELADRAFNRPRKETLETAQIAGVT-NRKQLRRVLKKRDASYSELVQRLERAEKMKKAEEHLEAQRTVMNSKGTKRKVREAKDGRPAVFRWKQERSR 744
MSSLRN VKR EHKER Q RRKLGLLEKHKDYV RAR+Y K+ R++ L+LKAA++NPDEFY M KT+GGVHV + KS+ + ++ LKTQDL Y+ R+ D RKA +L LH ++A N HT+F D E++ FDVAE+FDT PEL DRAFNR RK LETA++ + N KQ ++ ++DA Y EL RL RA K+ + L+ +R V +KG K+KV+ A++G PAV+RWKQ+R +
Sbjct: 1 MSSLRNVVKRREHKERGQLRERRKLGLLEKHKDYVKRARDYNSKQKRLKTLQLKAALRNPDEFYHRMRGTKTEGGVHVSTHNHIKSVETEALRTLKTQDLAYLHMKRAVDLRKAERLNRGLHFVDAPKNNNHTVFVDDEEQVDSFDVAEHFDTAPELVDRAFNRIRKRDLETAELPDLAANPKQKYKMQVEKDAMYRELRDRLARANKLGQMSAKLDLERKVQ-AKGRKKKVKAAENGMPAVYRWKQQRQK 250
BLAST of mRNA_P-fluviatile_contig14.2070.1 vs. uniprot
Match: A0A4D9DA46_9STRA (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA46_9STRA) HSP 1 Score: 231 bits (589), Expect = 7.030e-69 Identity = 129/247 (52.23%), Postives = 177/247 (71.66%), Query Frame = 1
Query: 4 SSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTDGGVHVLDGAK-SLPHDVVQMLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEARGFDVAEYFDTVPELADRAFNRPRKETLET-AQIAGVTNRKQLRRVLKKRDASYSELVQRLERAEKMKKAEEHLEAQRTVMNSKGTKRKVREAKDGRPAVFRWKQER 738
+SLRNA+ R +KER+QPA+R+K GLLEKHKDYV RA +Y +K + +L+ KAA +NPDEFYFAM + +T GVH + A+ SLPHD + +LKTQD+ YV+ R+ D +KA KL+ LH L NKHT+F D+E E FD A++F T P L RAFNRP+ ETLET + GV N +L++V K R+ +Y+EL +RL+R+ K+ EH++ ++ VM KG KRKV+EA+DG+PAVF+WK+ER
Sbjct: 4 ASLRNAIPRKTNKERSQPAARKKFGLLEKHKDYVQRANDYKRKSKALASLREKAAFRNPDEFYFAMTKGQTKEGVHRVRPAEASLPHDHIALLKTQDMRYVTMKRALDVKKAEKLQAGLHFLTEEAANKHTVFVDTEAEVETFDPAKHFGTDPALVTRAFNRPKLETLETPGAVLGVANVGELKKVRKAREKAYTELGERLKRSLSFKEVLEHMQVEKNVMG-KGRKRKVQEAEDGKPAVFKWKRER 249
BLAST of mRNA_P-fluviatile_contig14.2070.1 vs. uniprot
Match: A0A3R7K0P1_9STRA (U3 small nucleolar RNA-associated protein 11 n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K0P1_9STRA) HSP 1 Score: 230 bits (587), Expect = 2.620e-68 Identity = 131/251 (52.19%), Postives = 174/251 (69.32%), Query Frame = 1
Query: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTDGGVHVL--DGAKSLPHDVVQMLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEARGFDVAEYFDTVPELADRAFNRPRKETLETAQIAGVT-NRKQLRRVLKKRDASYSELVQRLERAEKMKKAEEHLEAQRTVMNSKGTKRKVREAKDGRPAVFRWKQERSR 744
MSSLRN VKR EHKER Q RRKLGLLEKHKDYV RA++Y +K+ ++ L+LKA+M+NPDEFY+ M KT+GGVH+ + AK L + ++ LKTQDL Y+ R+ D RKA KL LH ++ NKHT+F D + + FDVAE+FDT PELADRAFNR RK LET ++ + + KQ ++ ++DA Y EL RLERA+K+ + L+ +R V +KG K KV+ A+DG PAV+RWKQ+R +
Sbjct: 22 MSSLRNVVKRREHKERGQLRERRKLGLLEKHKDYVKRAKDYNQKQKHLRNLQLKASMRNPDEFYYKMIHGKTEGGVHISTHNHAKQLNAEALRTLKTQDLAYLHMKRAVDLRKAEKLNRGLHFIDTPKNNKHTVFVDEDDDVNKFDVAEHFDTAPELADRAFNRLRKADLETMELPDLAADPKQKYKMQVEKDAMYRELRDRLERAKKIGRMSAKLDLERKVQ-AKGKKMKVKGAEDGMPAVYRWKQQRQK 271
BLAST of mRNA_P-fluviatile_contig14.2070.1 vs. uniprot
Match: M4BX61_HYAAE (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BX61_HYAAE) HSP 1 Score: 224 bits (572), Expect = 2.630e-66 Identity = 133/251 (52.99%), Postives = 169/251 (67.33%), Query Frame = 1
Query: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTDGGVHVL--DGAKSLPHDVVQMLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEARGFDVAEYFDTVPELADRAFNRPRKETLETAQIAGVT-NRKQLRRVLKKRDASYSELVQRLERAEKMKKAEEHLEAQRTVMNSKGTKRKVREAKDGRPAVFRWKQERSR 744
MSSLRN VKR EHKER Q RRKLGLLEKHKDYV RAR+Y +K+ R+ AL+LKAA++NPDEF M +T+ GVHV + L + + LKTQDL Y R+ D RKA KL LH ++A RNKHT+F D ++ FDVA++FDT PELADRAFNR RK LETA++ +RK ++ + DA Y EL RL RAEK+ L+ +R V +KG KRKVR+A++G PAV+RWKQ+R +
Sbjct: 1 MSSLRNVVKRREHKERGQLRERRKLGLLEKHKDYVQRARDYNQKQKRLTALRLKAALRNPDEFNRRMVSTRTESGVHVSTHNHLHQLDSEALHTLKTQDLAYCHMKRAVDLRKAEKLNHGLHFVDAVKRNKHTVFVDDSEQVNTFDVAQHFDTAPELADRAFNRIRKRELETAELPDPAGDRKHKYKMQVEIDAKYRELRDRLARAEKLGLMSAKLDLERKVQ-AKGMKRKVRDAENGLPAVYRWKQQRQK 250 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2070.1 >prot_P-fluviatile_contig14.2070.1 ID=prot_P-fluviatile_contig14.2070.1|Name=mRNA_P-fluviatile_contig14.2070.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=249bp MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQAback to top mRNA from alignment at P-fluviatile_contig14:682881..689448- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2070.1 ID=mRNA_P-fluviatile_contig14.2070.1|Name=mRNA_P-fluviatile_contig14.2070.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6568bp|location=Sequence derived from alignment at P-fluviatile_contig14:682881..689448- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:682881..689448- >mRNA_P-fluviatile_contig14.2070.1 ID=mRNA_P-fluviatile_contig14.2070.1|Name=mRNA_P-fluviatile_contig14.2070.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1494bp|location=Sequence derived from alignment at P-fluviatile_contig14:682881..689448- (Porterinema fluviatile SAG_2381)back to top |