mRNA_P-fluviatile_contig14.2052.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2052.1 vs. uniprot
Match: A0A6H5L295_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L295_9PHAE) HSP 1 Score: 819 bits (2115), Expect = 6.710e-267 Identity = 611/1245 (49.08%), Postives = 710/1245 (57.03%), Query Frame = 2
Query: 635 GNSYSATRKRVRVTDEKLGEFSVLLTPYEGDHNDICEECDSGGDLLCCDFCNLVYHLRCVTPKLTELPNEELWLCPACTTEVTNRQIIKRRRLEDGGGRSASPGAGAS-RHYGQDRLPSFHGVKAENDAFRAFVMYKNQTTDIGLFSTAQEAARAYDRKALSLFGDAAVCNFPADEQVEVEGVATDGSTVKGVVRSFHQWRAELQWGNKKRHLGFFDRLEHAAQAYNRAALYMNGPETPLNPIKEGYKPPPLTERPVRVPRNKLFVQQLPLPLIALAQAVGANGSAEHERRRQQMQGKYHVPLIGENHQVSHLPPLPPPSRPWGGIRPGAAASALAKSRLPPSLQDCSMAV---GVDDETTCRKPPAKPLGKVTAKIENNVVLQAAAAAVAHAAXAVANPAAPGGAVDSAAPASV-------------PQIVIGEGKGPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIAADGVRSCEGHPLPAPAGPPAPHPSQAVLTDVVASCNDDRLECADATPLAIAIESAAXXXXXXXXXXXXXXAGIAGPPAAVSALSCTPKDSAAGVSPAADALEVCSGDLGSPTVGTTGARVPRVGLSSL-----------------NQLADETSAVN---INSSSPGGVVAAAVPV---VSVAMLLQGATEIGAEKKSITASASREAPCPCSAVERTSKILTTVSTASGAQIPGNSGKGEGEPLLDMDTAGFLPAVQQTRTVDSEEGARSSRTIGWCAKGWEGVDTKSTLPAARVAPKLSSAIGIAPTAPWIGL-AEKTPSASARNPVGVAKEGSAIVAAAAAXXXLNPVGTPPISASSPATKTSPSAL----NAASRKRKL---------------PKGPPCSDGGSSGNEDERIGRGNLSYLGSTSSVVRGSSSSGALPMPPPPAPISELTFDDIAELVWDPRSGPKPKGVAEARGSRAAAA-DKSALERAMWDRDSTLLERVAPAHAEKAMQVLQMHRHDVERAAQMLTVRHGIHVIGLSSVRTTRNKRAEQQASNPSAGXXXXXXXXXXXXXXXXXXXXXXXXXXX--ASFEGWQSAAVPK-------------TXXXXXXXXXXXXXXXXXXXXXXPTQRGGNMTDAQGVTREEVKLAGEAFMRHGRDLNAVQKVLGWKKSRVVEYYYCVWKYSPAYQVWKATRHQAGLPGVAAGAGSGGTISSGQSASAGAAMGGGLLHATSDGMRWRGSRLRTLKTPSSQ 4141
GN+ +RKRVRV DEKLGEF+VLL PY+GDHNDICE CD GGDLLCCDFCNLVYHL CVTPKLTELP+E+LW+CPACT EVT+R+I KRRRLEDGG RS SPG G S RH+GQ+R + GVKAENDAFRAFV+YKNQT DIGLF TAQ AARAYDRKALSLFGDAAVCNFPADEQVEVEGVATDG+TVKGVVRSFHQWRAE+QWGNKKRHLGFF+RLEHA+QAYNRAALYMNGPETPLNP KEGY PPPLT R VRVPRNKLFVQQLPLPLIA AQ G+N SAE RRRQQM+GKYH PL+G+NHQVS LPPL P S + +M++ V RK ++ G T ++ LQ ++ + AVA PA P V Q V G+GKG A AA+ C PPA P A + CAD+ P A A A AG A PPAA GVS A V + L SP G T A V G +L +QLAD N ++ ++ V + A P VS G+ I A + + +A P +AV ++ + A G + G+ +P + + + P+ + + +SE G S GWE ++TL A +P AP+ P L A TP ++ G + + + AA A + P+ + SA+ ++ +P A NAA RKR+L I +L+F+D+AELVWDPRSGPKP+G AEARG R AAA ++S LE+AMWDRDS LLERVAPAHAEK+MQVLQMHRHDVERAAQMLTVRHGIHV+GLSSVRTTRNKRAE XXXXXXXXXXXXXXXXXXXXXXXX ASFEGWQ+AA P+ T XXXXXXXXXXXX T R G DAQGVT EE KLAG+AFMRHGRDLNAVQK LGWK+SRVVEYYYCVWKYSPAYQVWKATRH+AGLPGV+ GAG+GG S S+SAG GGG+L A+SDGMRWRGSRLRTLK PSSQ
Sbjct: 122 GNTSGVSRKRVRVRDEKLGEFAVLLAPYKGDHNDICEVCDKGGDLLCCDFCNLVYHLCCVTPKLTELPDEDLWMCPACTAEVTSREIAKRRRLEDGG-RSTSPGPGGSGRHHGQERARGYQGVKAENDAFRAFVLYKNQTMDIGLFPTAQAAARAYDRKALSLFGDAAVCNFPADEQVEVEGVATDGTTVKGVVRSFHQWRAEMQWGNKKRHLGFFERLEHASQAYNRAALYMNGPETPLNPTKEGYVPPPLTGRSVRVPRNKLFVQQLPLPLIAQAQVEGSNNSAEFVRRRQQMRGKYHSPLVGDNHQVSRLPPLXXXXXXXXXXXXXXXXXXXXXXXXPSSTGEAAMSLLGATVAAAPGARKSESRVNGGGTTCVDLPEALQVEVSSKLVISQAVAAPAXXXXXXXXXLPTVVGTVTYSPVVSAVASQAVAGKGKGRAT------------------------------------AAANDTVGC----------PPATKPPPAAV----------EASCADSLPEAAAGAETAFTTKSAIVPAASSSAGFAKPPAAAED----------GVSKHRAAC-VAATALTSPPRGLTKA-VNSTGDGTLLANRGDMMMLDLERPWRSQLADSMEVDNRMGLDEAAANTVASVATPPPADVSGIKAEDGSIVITAGTTTTVSEVFLKAVYPAAAVAVAAEASRSQILAGGCET---FTWGQTKPT-EAEASVAPPSTPRRASAESERGGGSRTADYRPVTGWE----RTTLMRAPSSP--------APSPPQSSLPANGTPILASS---GATRGQAGVGAAETASLAMKPLRSAVASATPASSSVTPPARSPSPNAAGRKRRLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPDLSFEDVAELVWDPRSGPKPRGAAEARGPRGAAATNRSPLEQAMWDRDSALLERVAPAHAEKSMQVLQMHRHDVERAAQMLTVRHGIHVVGLSSVRTTRNKRAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSNGRASFEGWQAAAAPRAPAAAKPVGTASPTHGRASGPRGXXXXXXXXXXXXGGTPRCGKKADAQGVTHEEAKLAGDAFMRHGRDLNAVQKALGWKRSRVVEYYYCVWKYSPAYQVWKATRHKAGLPGVSKGAGTGGAGSGIHSSSAGGLTGGGILKASSDGMRWRGSRLRTLKAPSSQ 1278
BLAST of mRNA_P-fluviatile_contig14.2052.1 vs. uniprot
Match: D7FQ97_ECTSI (Chromodomain helicase-DNA-binding protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ97_ECTSI) HSP 1 Score: 378 bits (970), Expect = 4.880e-116 Identity = 181/214 (84.58%), Postives = 195/214 (91.12%), Query Frame = 2
Query: 653 TRKRVRVTDEKLGEFSVLLTPYEGDHNDICEECDSGGDLLCCDFCNLVYHLRCVTPKLTELPNEELWLCPACTTEVTNRQIIKRRRLEDGGGRSASPGAGAS-RHYGQDRLPSFHGVKAENDAFRAFVMYKNQTTDIGLFSTAQEAARAYDRKALSLFGDAAVCNFPADEQVEVEGVATDGSTVKGVVRSFHQWRAELQWGNKKRHLGFFDRLE 1291
+RKRVRV DEKLGEF+VLL PYEGDHNDICE CD GGDLLCCDFCNLVYHL CVTPKLTELP+E+LW+CPACT EVT+RQI KRRRLEDGG RS SPG G S RH+GQ+R+ + GVKAENDAFRAFV+YKNQT DIGLF TAQ AARAYDRKALSLFGDAAVCNFPADEQVEVEGVATDG+TVKGVVRSFHQWRAE+QWGNKKRHLGFF+R E
Sbjct: 58 SRKRVRVRDEKLGEFAVLLAPYEGDHNDICEICDKGGDLLCCDFCNLVYHLCCVTPKLTELPDEDLWMCPACTAEVTSRQIAKRRRLEDGG-RSTSPGPGGSGRHHGQERVRGYQGVKAENDAFRAFVLYKNQTMDIGLFPTAQAAARAYDRKALSLFGDAAVCNFPADEQVEVEGVATDGTTVKGVVRSFHQWRAEMQWGNKKRHLGFFERRE 270
BLAST of mRNA_P-fluviatile_contig14.2052.1 vs. uniprot
Match: D7FQ98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ98_ECTSI) HSP 1 Score: 345 bits (885), Expect = 7.200e-101 Identity = 243/352 (69.03%), Postives = 265/352 (75.28%), Query Frame = 2
Query: 3167 TSSVVRGSSSSGA-----LPMPPPPAPISELT---FDDIAELVWDPRSGPKPKGVAEARGSRA-AAADKSALERAMWDRDSTLLERVAPAHAEKAMQVLQMHRHDVERAAQMLTVRHGIHVIGLSSVRTTRNKRAEQQASNPSAGXXXXXXXXXXXXXXXXXXXXXXXXXXX--------ASFEGWQSAAVPKTXXXXXXXXXXXXXXXXXXXXXXP----------TQRGGNMTDAQGVTREEVKLAGEAFMRHGRDLNAVQKVLGWKKSRVVEYYYCVWKYSPAYQVWKATRHQAGLPGVAAGAGSGGTISSGQSASAGAAMGGGLLHATSDGMRWRGSRLRTLKTPSSQ 4141
+S V RG + GA L M P + ++ T D+AELVWDPRSGPKP+G AEARG R AAA++S LE+AMWDRDSTLLERVAPAHAEK+MQVLQMHRHDVERAAQMLTVRHGIHV+GLSSVRTTRNKRAE XXXXXXXXXXXXXXXXXXXXXXXXXXX ASFEGWQ+AA P+ XXXXXXXXXX R G DAQGVTREE KLAG+AFMRHGRDLNAVQK LGWK+SRVVEYYYCVWKYSPAYQVWKATRH+AGLPGV+ GAG+GG S SASAG GGG+L+A+SDGMRWRGSRLRTLK PSSQ
Sbjct: 177 SSGVTRGQAGVGAAETASLAMKPLRSAVASATPASSSDVAELVWDPRSGPKPRGAAEARGPRGVAAANRSPLEQAMWDRDSTLLERVAPAHAEKSMQVLQMHRHDVERAAQMLTVRHGIHVMGLSSVRTTRNKRAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRASFEGWQAAAAPRAPPAAKAVGTASPXXXXXXXXXXXXXXXXXXXXGAPRCGKKADAQGVTREEAKLAGDAFMRHGRDLNAVQKTLGWKRSRVVEYYYCVWKYSPAYQVWKATRHKAGLPGVSKGAGTGGAGSGVHSASAGGLTGGGILNASSDGMRWRGSRLRTLKAPSSQ 528
BLAST of mRNA_P-fluviatile_contig14.2052.1 vs. uniprot
Match: D7FP41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP41_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 2.670e-13 Identity = 54/162 (33.33%), Postives = 80/162 (49.38%), Query Frame = 2
Query: 716 YEGDHNDICEECDSGGDLLCCDFCNLVYHLRCVTPKLTELPNEELWLCPACTTEVTN----------RQIIKRRRLEDGGGRSASPGAGASRHYGQDRLPSFHGVKAENDAFRAFVMYKNQTTD---IGLFSTAQEAARAYDRKALSLFGDAAVCNFPADEQ 1162
++ DHND+CE C GGDLLCCD C+LV+H +C P+L E+P + W C C + T+ R + RR+++ G + + + + GV N+ F K+ T + +G F++A EAAR YDR + G A NFP Q
Sbjct: 105 WKEDHNDLCEVCSHGGDLLCCDTCSLVFHTKCHRPELKEVPAGD-WNCQFCVADSTHVPPEDRAEAQRNVAAMRRVQN---MYMPETRGDTLVDEKQKALRYRGVHWANNMFVVTHFDKHGTKEWLTLGKFASADEAARCYDRHVKATDGTKAKLNFPESAQ 262
BLAST of mRNA_P-fluviatile_contig14.2052.1 vs. uniprot
Match: A0A6H5KSV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV1_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 2.860e-13 Identity = 56/171 (32.75%), Postives = 81/171 (47.37%), Query Frame = 2
Query: 689 GEFSVLLTPYEGDHNDICEECDSGGDLLCCDFCNLVYHLRCVTPKLTELPNEELWLCPACTTEVTN----------RQIIKRRRLEDGGGRSASPGAGASRHYGQDRLPSFHGVKAENDAFRAFVMYKNQTTD---IGLFSTAQEAARAYDRKALSLFGDAAVCNFPADEQ 1162
G LL DHND+CE C GGDLLCCD C+LV+H +C P+L E+P + W C C + ++ R + RR+++ G + + + + GV N+ F K+ T + +G F++A EAAR YDR + G A NFP Q
Sbjct: 130 GGLDPLLRFLPEDHNDLCEVCSHGGDLLCCDTCSLVFHTKCHRPELKEVPAGD-WNCQFCVADSSHVPPEDRAEAQRNVAAMRRVQN---MYMPETRGDTLVDEKQKALRYRGVHWANNMFVVTHFDKHGTKEWLTLGKFASADEAARCYDRHVKATDGTKAKLNFPESAQ 296
BLAST of mRNA_P-fluviatile_contig14.2052.1 vs. uniprot
Match: A0A7R9UFM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFM1_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 5.950e-13 Identity = 34/76 (44.74%), Postives = 45/76 (59.21%), Query Frame = 2
Query: 728 HNDICEECDSGGDLLCCDFCNLVYHLRCVTPKLTELPNEELWLCPACTT------------EVTNRQIIKRRRLED 919
HND+CE CD GGD++CCD CNL YH C+ PKL ++P E W+CPAC E NRQ+ + + L +
Sbjct: 12 HNDVCEICDEGGDIICCDTCNLSYHGSCLEPKLEDVP--EFWMCPACRVKFVSAADIAKAKEYVNRQVERVQELRE 85
BLAST of mRNA_P-fluviatile_contig14.2052.1 vs. uniprot
Match: A0A3B4WIL7_SERLL (PHD-type domain-containing protein n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=A0A3B4WIL7_SERLL) HSP 1 Score: 77.4 bits (189), Expect = 7.360e-13 Identity = 31/56 (55.36%), Postives = 36/56 (64.29%), Query Frame = 2
Query: 716 YEGDHNDICEECDSGGDLLCCDFCNLVYHLRCVTPKLTELPNEELWLCPACTTEVT 883
YE DH D CE C GG+LLCCD C YH+ C+ P L E+PN E WLCP CT +
Sbjct: 40 YETDHQDYCEVCQQGGELLCCDTCTSSYHIHCLNPPLPEIPNGE-WLCPRCTVRCS 94
BLAST of mRNA_P-fluviatile_contig14.2052.1 vs. uniprot
Match: A0A8J9RXU9_9CHLO (Probable AP2-like ethylene-responsive transcription factor PLT2 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RXU9_9CHLO) HSP 1 Score: 85.1 bits (209), Expect = 9.570e-13 Identity = 56/153 (36.60%), Postives = 82/153 (53.59%), Query Frame = 2
Query: 938 SPGAGASRHYGQDRLPS-FHGVKAENDA--FRAFVMYKNQTTDIGLFSTAQEAARAYDRKALSLFGDAAVCNFP----ADEQVEVEGVATDG-------STVKGVVRSFHQWRAELQWGNKKRHLGFFDRLEHAAQAYNRAALYMNGPETPLN 1354
+P A R G R S + GV D +RA + Y ++ +G + TA+EAARAYDRKAL G +A+ NFP A E + EG A + S+ +GV R+ +W+A ++ N K+ LG F+ AA+AY+ AA+ + GP N
Sbjct: 76 NPPASGQRIPGMGRGTSLYRGVSKAGDKKKWRAMIQYNHEQHHVGYYPTAEEAARAYDRKALLFMGPSAITNFPPTDYAGEDLTAEGTAEEQAKKRRRTSSFRGVTRAGGKWKAAIRANNVKKDLGVFEDELDAARAYDAAAVQLLGPAAVTN 228
BLAST of mRNA_P-fluviatile_contig14.2052.1 vs. uniprot
Match: I0Z4T9_COCSC (Uncharacterized protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z4T9_COCSC) HSP 1 Score: 80.1 bits (196), Expect = 1.070e-11 Identity = 48/135 (35.56%), Postives = 73/135 (54.07%), Query Frame = 2
Query: 989 FHGVKAENDA--FRAFVMYKNQTTDIGLFSTAQEAARAYDRKALSLFGDAAVCNFP----ADEQVEVEGVATDG-------STVKGVVRSFHQWRAELQWGNKKRHLGFFDRLEHAAQAYNRAALYMNGPETPLN 1354
+ GV D +RA + Y + +G ++TA++AARAYDRKAL G +A+ NFP A E + +G A + S +GV +S +W+A ++ N KR LG F+ AA+AY+ AA+ + G N
Sbjct: 88 YRGVSKAGDKKKWRAMIQYNHMQHHVGYYATAEDAARAYDRKALLFMGPSAITNFPPSNYAGEDLTADGTAEEQAKKRRRTSAFRGVTKSGGKWKASIRANNVKRDLGVFEDELEAARAYDAAAVQLLGESAVTN 222
BLAST of mRNA_P-fluviatile_contig14.2052.1 vs. uniprot
Match: A0A6P8I9V1_ACTTE (PHD finger protein 21A-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8I9V1_ACTTE) HSP 1 Score: 71.2 bits (173), Expect = 7.000e-11 Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 2
Query: 719 EGDHNDICEECDSGGDLLCCDFCNLVYHLRCVTPKLTELPNEELWLCPACTTEVTNRQIIKRRRLED 919
+ DH + C C S G+LL CD CNLVYHL+C+ P LT +P+ +W+CP C ++ ++K R D
Sbjct: 47 DDDHENACTVCKSNGELLMCDTCNLVYHLKCLDPPLTGIPSG-MWICPKCKVRSIDKAVMKLRANTD 112 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2052.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2052.1 >prot_P-fluviatile_contig14.2052.1 ID=prot_P-fluviatile_contig14.2052.1|Name=mRNA_P-fluviatile_contig14.2052.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1318bp MALRLEQAVSRSASHQRSALPKRTPSAQDASVGINTAVAAAPAPNIIKGNback to top mRNA from alignment at P-fluviatile_contig14:534856..545262+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2052.1 ID=mRNA_P-fluviatile_contig14.2052.1|Name=mRNA_P-fluviatile_contig14.2052.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10407bp|location=Sequence derived from alignment at P-fluviatile_contig14:534856..545262+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:534856..545262+ >mRNA_P-fluviatile_contig14.2052.1 ID=mRNA_P-fluviatile_contig14.2052.1|Name=mRNA_P-fluviatile_contig14.2052.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=7908bp|location=Sequence derived from alignment at P-fluviatile_contig14:534856..545262+ (Porterinema fluviatile SAG_2381)back to top |