mRNA_P-fluviatile_contig14.2046.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2046.1 vs. uniprot
Match: D7FQA2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQA2_ECTSI) HSP 1 Score: 527 bits (1357), Expect = 3.090e-161 Identity = 385/850 (45.29%), Postives = 498/850 (58.59%), Query Frame = 2
Query: 512 ARSALDETTMIGYDDITTASTAD--AKQIEAFEYQDLTNVAETVKTAFDEFLGVSPLWFSVEKDDGHGADGHFYGGGGFEMFGDWRVEESLVDAFESQPQARSDTQEIVKAVNALLAVYDENGIKQRKGLEECVLAFQRAIEGGLDQQLNMLNQQCTQRWSEETARVEAANVGLVEMEASNAARLEGLAQMLKDRRRTVLEELKHEREANTRKLLAATLGDPLEESRKLFERQLEETELEGMLKQRRRLLDLKSKGVQLREDEVEGALLKAARDKVENLMQVVEKMQNQQTKLILTLQAEKKNVSAMRQRVSRRLHPSTNNKVTLKEAPTTAKGGGKSTSTIRKRAAAKKLKSAGLAVAACIAFTKDKKGDAREKGGEGGEFEGHEPKDNDLGERRGELSGLDLLDACDQLENDNLRLRNRLAKLELQTMQREHGAEDGQLDDESLLMP-VLKEKRELQAQLEGLNMANERQLQELERVRGESPPPQMTMAAARTTMTGARMVTSATITPAAPKAEPGKIQDTEDSIAREFKASIEAETKSLNGKVRTLRRKLVFKLACKIMRRRFEEAGLGAGDDPEPPPGPVDGYRNQVEIRVCHGLAPEIQLHATLLQQRKAVKCGIERAAREAEELQRMIDGALGVGSSAAMGAGGSNPTTAEAEGSRRDSEEGSGXXXRGSGGEEGWAED--EGG--------------EETGRPRAGKSTVVTVSTVQGVGEGG-GVPATRSNDQPENM--RKSSVLRTCSHFLLVSPSCRFRALTQKKVEVQKRLAALQSIHEENEKAVRANDIDDVDREAIEAVLRNEDIVRAKALAVLDVLCSSAMTKARARWLREALNRS 2995
+RS T + YD T +T D Q EAFEYQDL +VAETVK AFD+ G +I+ VNAL+A YDEN KQR+GLEEC++AF +A+EG LD +L+ + QQCT+R EE + EAA GLVE+E ARLE L ++LKDR+ TVL LKHEREANTRK+LA+TLGDPLEE RKLF +Q+EETELEG LKQRRRLLDL S+GV ++++E+E A+LKA+RD+V+NLMQVV+KMQNQQTKL++TLQAEKKN+SAMRQ VS+RL S +N+ A T + GG S KR A+KK K+A LAV A AFT G+ D D + +LSG++LL AC++LEN N+ LR RLAKLELQTMQ+EHG ++ +L+ +P VL+ K+EL+ +LEGL MANE + +ELER+RG P A T M+ + + T TP P K D + + +F A+IEAET +L KV+TLRR LVF LACK+MRRRF++AGLG G+DP PP GP+ +Q+E GL P++Q+HA L+Q+ AV+ IE+ R +ELQ I+ T ++ G R E SG ED EGG EE GR GK + +GVG+GG G P + + P M +SV T ++ + S R R L + QKRL LQS+ +NE+A + N +D VD EA+EAVLRNE I R KALAVLD+LCS M KARARWL++AL RS
Sbjct: 44 SRSEAATTAIEPYDATPTKTTEDNPPTQFEAFEYQDLADVAETVKGAFDDLTG-----------------------------------------------------DILTKVNALVATYDENSAKQRQGLEECMVAFNKAVEGDLDTRLDTMTQQCTERHIEEKEKTEAAQAGLVELEEQTVARLEALGKVLKDRQETVLVALKHEREANTRKILASTLGDPLEEGRKLFNKQVEETELEGKLKQRRRLLDLNSQGVSVQQEEIEAAMLKASRDEVDNLMQVVDKMQNQQTKLLVTLQAEKKNISAMRQHVSKRLGASVDNESI---AATPPREGGPSGGI--KRHASKKGKTAALAVTA--AFTMSNPGEGI-------------LDDGDSLDVISQLSGIELLHACERLENHNVTLRQRLAKLELQTMQKEHGGDEDELNKTDSRLPRVLETKKELEGKLEGLQMANEERSKELERIRGGGDVPTTKSAGPTTAMSS---IPTTTETPG-----PVKRPDANGNGSDDFMATIEAETTTLTQKVKTLRRTLVFNLACKVMRRRFKDAGLGPGNDPNPPKGPIVVDDSQLEGAGDRGLPPDMQVHAARLEQKNAVQREIEQTERREQELQHAIENTTSTNRETL--------TDGDSTGKRLAGEVASG------------GEDVMEGGLGRXXXXXXXXXXXEENGRRHTGKRP--STREDEGVGDGGEGQPKLKKSKVPSRMPTEAASVGTTAANM---NASARIRTLQSMQATAQKRLDILQSLAAKNEEAAKENSLDAVDSEAVEAVLRNESIAREKALAVLDLLCSREMAKARARWLKQALERS 787 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2046.1 >prot_P-fluviatile_contig14.2046.1 ID=prot_P-fluviatile_contig14.2046.1|Name=mRNA_P-fluviatile_contig14.2046.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1808bp MLELGHLGRWTVKNDVQGAEGNARSALDETTMIGYDDITTASTADAKQIEback to top mRNA from alignment at P-fluviatile_contig14:451328..470316+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2046.1 ID=mRNA_P-fluviatile_contig14.2046.1|Name=mRNA_P-fluviatile_contig14.2046.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=18989bp|location=Sequence derived from alignment at P-fluviatile_contig14:451328..470316+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:451328..470316+ >mRNA_P-fluviatile_contig14.2046.1 ID=mRNA_P-fluviatile_contig14.2046.1|Name=mRNA_P-fluviatile_contig14.2046.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=10848bp|location=Sequence derived from alignment at P-fluviatile_contig14:451328..470316+ (Porterinema fluviatile SAG_2381)back to top |