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Homology
BLAST of mRNA_P-fluviatile_contig14.2045.1 vs. uniprot
Match: D7FQA1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA1_ECTSI) HSP 1 Score: 254 bits (650), Expect = 4.720e-77 Identity = 132/179 (73.74%), Postives = 153/179 (85.47%), Query Frame = 2
Query: 197 SGNAFTLTARPSVETVRHGGSALTPHQTKLRRRRFRNGNTWGGVSSLRAIGVTSSVIETVAKGVLSLALANPKQATVECTISSSARNLVRGNLDQAKVDGLNWVTPMGMTLRTIALTLNEMQIKPAEVFRGKILFKSPAEGEAILDLDANDFGNFLVHPLLTTADLPSGVFEFRKEGAS 733
+ AF+ TA SV +R+ + P Q K RRRR N + GGVSSL+AIGVTSSVIE+VAKG+L+LALANP+QATVECT++SSA NLVRGNL+QAKVDGLNWVTPMGMTLRTIALTLNEM IKP+EVFRGKILFK PAEGEA+++LDA DFGNFLVHPLLTTADLPSG F+FR+EG +
Sbjct: 30 AAEAFSFTASSSVGALRNVAVSSAPFQRKWRRRRSLNRGS-GGVSSLKAIGVTSSVIESVAKGILNLALANPRQATVECTVNSSAMNLVRGNLEQAKVDGLNWVTPMGMTLRTIALTLNEMNIKPSEVFRGKILFKCPAEGEALIELDAQDFGNFLVHPLLTTADLPSGKFDFRREGTA 207
BLAST of mRNA_P-fluviatile_contig14.2045.1 vs. uniprot
Match: A0A7S2UAU9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAU9_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 6.280e-11 Identity = 46/132 (34.85%), Postives = 73/132 (55.30%), Query Frame = 2
Query: 347 GVTSSVIETVAKGVLSLALANPKQATVECTISS-SARNLVRGNLDQAKVDGLNWVTPMGMTLRTIALTLNEMQIKPAEVF-RGKILFKSPAEGEAILDLDANDFGNFLVHPLLTTADLPSGV---FEFRKEG 727
GVTSS+I +A +++L L + + VEC + SA L++G + V G W +P+G+T R I T+ + + + + K+ PA+GEA++ L A DFGNF+ HPL+ +P +F KEG
Sbjct: 124 GVTSSLISQLA--IVALQLRLKQNSGVECNVQGKSADLLLKGKVGPVTVRGKGWGSPLGLTCRAIEATVGQCDLDLGSIVSKRKLRLTVPAKGEAMIALTAEDFGNFITHPLMKAPAVPGSAEKGVQFCKEG 253
BLAST of mRNA_P-fluviatile_contig14.2045.1 vs. uniprot
Match: D7FWQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWQ0_ECTSI) HSP 1 Score: 72.8 bits (177), Expect = 7.490e-11 Identity = 38/113 (33.63%), Postives = 63/113 (55.75%), Query Frame = 2
Query: 395 LALANPKQATVECTISSSARNLVRGNLDQAKVDGLNWVTPMGMTLRTIALTLNEMQIKPAEVFRGKILF--KSPAEGEAILDLDANDFGNFLVHPLLTTADLPSGVFEFRKEG 727
L L N ++ V C++ S A +L++G L A V G W + +G+T R+I + + +++ +FR ++L + P G AI+ A DFGNFL HPL+ + F F ++G
Sbjct: 3 LVLRNGRETHVSCSVDSDALDLLQGRLRGASVRGRGWASRLGLTARSIDVDVGIVRLDVGALFRHRVLQFEQPPPSGNAIVVFSAEDFGNFLAHPLIRRTVVAGRSFVFDRQG 115
BLAST of mRNA_P-fluviatile_contig14.2045.1 vs. uniprot
Match: A0A383VV08_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VV08_TETOB) HSP 1 Score: 62.4 bits (150), Expect = 5.840e-7 Identity = 37/114 (32.46%), Postives = 64/114 (56.14%), Query Frame = 2
Query: 350 VTSSVIETVAKGVLSLALANPKQATVECTISSSARNLVRGNLDQAKVDGLNWVTPMGMTLRTIALTLNEMQIKPAEV-FRGKILFKSPAEGEAILDLDANDFGNFLVHPLLTTA 688
+T+ ++E V L+L + V+ +IS +L+ G ++ K+ G W +P+ +T + + T+ E + P+ V F+ +IL + G A + +A DFGNFLVHPL+T A
Sbjct: 58 LTADILENVT--CLALRARLKECRAVKTSISCDTWSLLAGRVNGVKIHGEGWRSPLNLTAQVLEATVGEASLDPSAVLFKQQILLTNVPVGTARVMFNAADFGNFLVHPLMTEA 169
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 73.6 |
| Seed ortholog evalue | 2.1e-10 |
| Seed eggNOG ortholog | 2880.D7FWQ0 |
| EggNOG OGs | 2E7A0@1,2SDWV@2759 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | chloroplast |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-01_006920.1 |
| Exons | 4 |
| Model size | 1639 |
| Cds size | 1044 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815598.0897963-UTR-P-fluviatile_contig14:448104..448593 | 1622815598.0897963-UTR-P-fluviatile_contig14:448104..448593 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig14 448105..448593 - |
| 1693562383.6102123-UTR-P-fluviatile_contig14:448104..448593 | 1693562383.6102123-UTR-P-fluviatile_contig14:448104..448593 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig14 448105..448593 - |
| 1622815598.151145-UTR-P-fluviatile_contig14:451201..451307 | 1622815598.151145-UTR-P-fluviatile_contig14:451201..451307 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig14 451202..451307 - |
| 1693562383.66365-UTR-P-fluviatile_contig14:451201..451307 | 1693562383.66365-UTR-P-fluviatile_contig14:451201..451307 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig14 451202..451307 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815598.1053238-CDS-P-fluviatile_contig14:448593..448929 | 1622815598.1053238-CDS-P-fluviatile_contig14:448593..448929 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 448594..448929 - |
| 1693562383.6257064-CDS-P-fluviatile_contig14:448593..448929 | 1693562383.6257064-CDS-P-fluviatile_contig14:448593..448929 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 448594..448929 - |
| 1622815598.1166372-CDS-P-fluviatile_contig14:449585..449796 | 1622815598.1166372-CDS-P-fluviatile_contig14:449585..449796 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 449586..449796 - |
| 1693562383.6340559-CDS-P-fluviatile_contig14:449585..449796 | 1693562383.6340559-CDS-P-fluviatile_contig14:449585..449796 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 449586..449796 - |
| 1622815598.1281278-CDS-P-fluviatile_contig14:450241..450349 | 1622815598.1281278-CDS-P-fluviatile_contig14:450241..450349 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 450242..450349 - |
| 1693562383.6449137-CDS-P-fluviatile_contig14:450241..450349 | 1693562383.6449137-CDS-P-fluviatile_contig14:450241..450349 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 450242..450349 - |
| 1622815598.1392138-CDS-P-fluviatile_contig14:450812..451201 | 1622815598.1392138-CDS-P-fluviatile_contig14:450812..451201 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 450813..451201 - |
| 1693562383.6552439-CDS-P-fluviatile_contig14:450812..451201 | 1693562383.6552439-CDS-P-fluviatile_contig14:450812..451201 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig14 450813..451201 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2045.1 >prot_P-fluviatile_contig14.2045.1 ID=prot_P-fluviatile_contig14.2045.1|Name=mRNA_P-fluviatile_contig14.2045.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=348bp
MRFSILPMSVSRMSAALVVSVLVGVLVVFPSGNAFTLTARPSVETVRHGG SALTPHQTKLRRRRFRNGNTWGGVSSLRAIGVTSSVIETVAKGVLSLALA NPKQATVECTISSSARNLVRGNLDQAKVDGLNWVTPMGMTLRTIALTLNE MQIKPAEVFRGKILFKSPAEGEAILDLDANDFGNFLVHPLLTTADLPSGV FEFRKEGASRCGARPRDLHGGLAGAAGGDGGLSTREVRQDPRPRRSEGPA DRPGHQDAVSRDDGVLQHRRPRPRRYRREVQGHASRLQQQGGALAARDGE RRGAPDSHPGEHEVLRQSPSLGLVCVCMRQRVVRNRVYRVQTGRQAT* back to topmRNA from alignment at P-fluviatile_contig14:448105..451307- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig14.2045.1 ID=mRNA_P-fluviatile_contig14.2045.1|Name=mRNA_P-fluviatile_contig14.2045.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3203bp|location=Sequence derived from alignment at P-fluviatile_contig14:448105..451307- (Porterinema fluviatile SAG_2381) ACCACACACGCCCCCCCCTCCGCCGCTATCCCCACACACAACACACACGT
AAGCCACGCACATACCCCCCTAACCGGCGCTCTCAGGGCCACAGTATCCC
TGGTGAATGAGATTCTCGATTCTGCCGATGTCTGTCTCGAGAATGTCTGC
TGCTCTCGTCGTTTCGGTGCTGGTGGGGGTGCTTGTGGTGTTTCCTTCGG
GGAATGCTTTCACGCTGACGGCGCGCCCTTCGGTCGAAACCGTCCGGCAC
GGAGGGTCGGCGCTAACCCCGCACCAGACGAAGCTGAGACGGAGACGGTT
CAGAAATGGTAACACATGGGGTGGGGTTTCATCTCTGCGGGCGATAGGCG
TGACCTCGTCGGTGATCGAGACGGTAGCCAAGGGCGTTTTGAGCTTGGCG
CTCGCGAATCCCAAGCAGGCGACTGTGGAATGCACGATCAGCAGCTCGGC
GCGAAATCTCGTGCGAGGGAACTTGGACCAGGCAAAGGTCGACGGGTGAG
ATCGCGTTCCAACGCGTAGGGTCTAGAGCTTAGGCCCATAAGCGCATGCA
CATCAAGTCTCGGTGAACCCGCTACTTGTTGGCTCAACAGGCAAGTCAGT
TTACATGCGCAAGGAAGCAACTTGTTTCGGGGACAAGTTGTCCCGCTGGA
ACAGCCAACCAGAGCTCGCGAGGATGCTGCTTGACTCATATTGTCCCCTC
GGGACCCCTCGGGTATACCGGTGCCATGTGGAGAGCTGCGTAGTCTCCGT
GAAAGGATTCCCAACACGTGATCATTTGATCTTTCTCGCTTGCGCGAGTT
TCGCGGTGTGTTGGTGAGGGGCTTGTAGGATTTTACGGCGATACGATGTC
ACCACCGATCGCCCTCAGAGACCCGGATATCTTGCTGTCCCGACCGACCC
CGCCGCCTGTGTTTGACGTTCCCCTCCGCCGAATCACACCAATCGTGCTA
ACAAACAGGTTGAACTGGGTGACGCCGATGGGAATGACGCTGCGGACGAT
CGCGCTCACGCTTAACGAGATGCAGATAAAACCCGCAGAGGTTTTTCGGG
GCAAGATCCTGTTCAAGTGAGTCCGTTTTTCTTCGGGAGCGCGAAATACG
TTACGTCCGCACTCCATGTTCGGAGTGCCACCAGCATCACTCAAACTTGC
CAATTCCCATCCCTCGCCCGATGACTCGCAGCGGCCACACGGTCGGTGCA
AATGCCCGCTTGGCTGCTAATGCCCACCCACCTGCCTAACCCTCTAGCCG
GGCATAACCCAATGTCCTCCGTGCGAGTATTAGTGAGATTTGACCATGCT
ACCTGAACAACCTCTGTGTGGTCACCATATGCTCCCTTCCTGTCGAATCA
TTTATACCTTGTCCGCGGACCATTCTTCACTTGAGACTCTCTTCTTAATC
CAATCCCTCCTGCTCTACCACCGTCTACCACTCCCCTCCCGGTGAATCCA
CGGCGTATTTCGTCTGTGCCTTCTATCTAAAACGGAAAATACACCTCGTG
TTTGTGAGAAGGTCCCCGGCCGAAGGAGAAGCGATCTTGGATCTGGACGC
CAACGACTTCGGCAACTTCCTAGTGCACCCGCTGCTGACGACGGCCGACC
TCCCCAGCGGGGTGTTCGAGTTCCGGAAGGAAGGAGCCTCTCGATGCGGA
GCGCGGCCGCGCGACCTTCACGGGGGTCTGGCAGGGGCAGCCGGTGGTGA
TGGAGGCCTGTCAACCCGAGAGGTATGCGTCGTGCGCTTCGTTTGCTCCT
TAGCGACGTTTAGAGAAATGGTACCAAGTTGCGCGGACGCGTTGTCGTGG
CTCGATGAAAAGTGGGGTGTGGATGCCTTTCTGCGTGAGAGAATGCACCG
TTTCATGCCGGAGCCGAGGAGGGGGCAGGGGCGGGGAAGGGGCGGGGAAG
AGCCGTGAAAGGAAAGGAGGAAGGAAGGAAGGAAGGACAAGAGTGCTCGT
AGCAGTTGCCAAAGTTGCTTCTTTTCTTTCCCGTCCCACTAACTTGTGCT
CGGAGCACTTGTACCGCGAAGCTCTCGTGCGCACGCCCTTTAAGGTGGCG
TTTCTGCAAATGCCGGTTGGTTTGCACGTGGCGCGAGTCCACGAGTCTCT
CTAGGGATTTCGTTGTCAAGTTGGCCGCAGTCACGCTGCCACCGCCGTGC
GGCATCCGCTGCCAAACACTGCTATATTTTCGTTTGTCTGAGCAGCCATT
TCGCTCGGCCGAGCCGCTTTTGATCCCTCCTTCATATCCCGCTCCCTGGC
TTTGACAATTTTCGCCTCTCCTGTCCGCGCGTCGCGTCGCTTTCGTTCCG
CCCCTCGAACTCGCTCGCTCGAAACGTCACAATACATACTTTTCATCAAC
AATTGATGGCAAAAAATACACAACATAGGTTCGGCAAGATCCACGCCCGC
GTCGCTCAGAGGGGCCGGCTGACCGACCTGGGCATCAAGACGCTGTCAGC
CGAGATGACGGAGTTCTTCAACACCGTCGTCCTCGACCTCGACGGTACCG
CCGTGAGGTTCAGGGACATGCATCACGGCTTCAACAGCAAGGGGGAGCCC
TCGCTGCGCGTGACGGTGAGCGTCGTGGTGCACCGGATTCCCACCCGGGA
GAACATGAAGTTCTGAGGCAGTCACCATCGCTCGGTTTGGTTTGCGTTTG
TATGCGACAAAGGGTTGTTCGAAACCGTGTCTATCGGGTTCAGACAGGCC
GGCAAGCGACCTGACCACGGCTGGAGCTATCTCTCTGCCGCTAAAACGAC
GGGGGGGGGGTTCTGGTTGACCGACATTTTGTTAGGAAGTAATCCACGCA
CGTGCAGCCGTTAGCGGTATGATTGGTGAGTTTAGAATCTGCTATAATTG
GAAGGGTGCAAGGTCCCCCTTGCGGAGGATGCACCCCCGCGTCTGAAATA
TTTTCTGTGGGGATGGTTTCAACATTGAATGCGGGACCTGTTGCGAGTTT
GATGTTTCTTGTGTAAGCAGGCAGTTGCTGTTGTAAATTGAAGTGTGGGT
GCAATTGATTGCGGTCGGGCGCGTTATTTGTTTTGAGGAGCCTGATGATG
TGAGGAAGTGCCGAAATGAAAGCTTTTAAAACGTTGCGTGTGCCTCGTCG
TGCGTGAGGGAAGAGCATGTTAGCTTCTAAGTGCCGAATCACATTCTTTC
AGGGGTATTCTCCTGTTCTGGCGAAGTTGAAAGTGTATTTTTGTGTGCGT
GTG back to topCoding sequence (CDS) from alignment at P-fluviatile_contig14:448105..451307- >mRNA_P-fluviatile_contig14.2045.1 ID=mRNA_P-fluviatile_contig14.2045.1|Name=mRNA_P-fluviatile_contig14.2045.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2088bp|location=Sequence derived from alignment at P-fluviatile_contig14:448105..451307- (Porterinema fluviatile SAG_2381) ATGAGATTCTCGATTCTGCCGATGTCTGTCTCGAGAATGTCTGCTGCTCT CGTCGTTTCGGTGCTGGTGGGGGTGCTTGTGGTGTTTCCTTCGGGGAATG CTTTCACGCTGACGGCGCGCCCTTCGGTCGAAACCGTCCGGCACGGAGGG TCGGCGCTAACCCCGCACCAGACGAAGCTGAGACGGAGACGGTTCAGAAA TGGTAACACATGGGGTGGGGTTTCATCTCTGCGGGCGATAGGCGTGACCT CGTCGGTGATCGAGACGGTAGCCAAGGGCGTTTTGAGCTTGGCGCTCGCG AATCCCAAGCAGGCGACTGTGGAATGCACGATCAGCAGCTCGGCGCGAAA TCTCGTGCGAGGGAACTTGGACCAGGCAAAGGTCGACGGATGAGATTCTC GATTCTGCCGATGTCTGTCTCGAGAATGTCTGCTGCTCTCGTCGTTTCGG TGCTGGTGGGGGTGCTTGTGGTGTTTCCTTCGGGGAATGCTTTCACGCTG ACGGCGCGCCCTTCGGTCGAAACCGTCCGGCACGGAGGGTCGGCGCTAAC CCCGCACCAGACGAAGCTGAGACGGAGACGGTTCAGAAATGGTAACACAT GGGGTGGGGTTTCATCTCTGCGGGCGATAGGCGTGACCTCGTCGGTGATC GAGACGGTAGCCAAGGGCGTTTTGAGCTTGGCGCTCGCGAATCCCAAGCA GGCGACTGTGGAATGCACGATCAGCAGCTCGGCGCGAAATCTCGTGCGAG GGAACTTGGACCAGGCAAAGGTCGACGGGTTGAACTGGGTGACGCCGATG GGAATGACGCTGCGGACGATCGCGCTCACGCTTAACGAGATGCAGATAAA ACCCGCAGAGGTTTTTCGGGGCAAGATCCTGTTCAAGTTGAACTGGGTGA CGCCGATGGGAATGACGCTGCGGACGATCGCGCTCACGCTTAACGAGATG CAGATAAAACCCGCAGAGGTTTTTCGGGGCAAGATCCTGTTCAAGTCCCC GGCCGAAGGAGAAGCGATCTTGGATCTGGACGCCAACGACTTCGGCAACT TCCTAGTGCACCCGCTGCTGACGACGGCCGACCTCCCCAGCGGGGTGTTC GAGTTCCGGAAGGAAGGAGCCTCTCGATGCGGAGCGCGGCCGCGCGACCT TCACGGGGGTCTGGCAGGGGCAGCCGGTGGTGATGGAGGCCTGTCAACCC GAGAGGTCCCCGGCCGAAGGAGAAGCGATCTTGGATCTGGACGCCAACGA CTTCGGCAACTTCCTAGTGCACCCGCTGCTGACGACGGCCGACCTCCCCA GCGGGGTGTTCGAGTTCCGGAAGGAAGGAGCCTCTCGATGCGGAGCGCGG CCGCGCGACCTTCACGGGGGTCTGGCAGGGGCAGCCGGTGGTGATGGAGG CCTGTCAACCCGAGAGGTTCGGCAAGATCCACGCCCGCGTCGCTCAGAGG GGCCGGCTGACCGACCTGGGCATCAAGACGCTGTCAGCCGAGATGACGGA GTTCTTCAACACCGTCGTCCTCGACCTCGACGGTACCGCCGTGAGGTTCA GGGACATGCATCACGGCTTCAACAGCAAGGGGGAGCCCTCGCTGCGCGTG ACGGTGAGCGTCGTGGTGCACCGGATTCCCACCCGGGAGAACATGAAGTT CTGAGGCAGTCACCATCGCTCGGTTTGGTTTGCGTTTGTATGCGACAAAG GGTTGTTCGAAACCGTGTCTATCGGGTTCAGACAGGCCGGCAAGCGACCT GAGTTCGGCAAGATCCACGCCCGCGTCGCTCAGAGGGGCCGGCTGACCGA CCTGGGCATCAAGACGCTGTCAGCCGAGATGACGGAGTTCTTCAACACCG TCGTCCTCGACCTCGACGGTACCGCCGTGAGGTTCAGGGACATGCATCAC GGCTTCAACAGCAAGGGGGAGCCCTCGCTGCGCGTGACGGTGAGCGTCGT GGTGCACCGGATTCCCACCCGGGAGAACATGAAGTTCTGAGGCAGTCACC ATCGCTCGGTTTGGTTTGCGTTTGTATGCGACAAAGGGTTGTTCGAAACC GTGTCTATCGGGTTCAGACAGGCCGGCAAGCGACCTGA back to top
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