mRNA_P-fluviatile_contig14.2002.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.2002.1
Unique NamemRNA_P-fluviatile_contig14.2002.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig14.2002.1 vs. uniprot
Match: A0A6H5JZQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ7_9PHAE)

HSP 1 Score: 479 bits (1232), Expect = 7.120e-150
Identity = 333/582 (57.22%), Postives = 377/582 (64.78%), Query Frame = 1
Query:   61 SGGFGLAQGGGGQTTXXXXXXAD--------GVGEGGKAFVEGASKALAMNRERVMGWMKELRPKDWTPKEEESGETVEEESIQELRRAVRRLYLDAPDPAVHTAMVVARARPPAPK-AGEAMEAAAVGGSATTAVAAA---------ARGVDRVVGTGADRHLTKLVWFRSSSSRGFAEIKGVHGPYYQPSADDVGMRICIKCTLAGPALDLGGTGG---LSPAGGGRGRRDRHAGGGGRNSHPL---SPQWRQAQITFAEVGPIVLDSAVGAEVDRLLAADGVAVFQGLVRRDTPGDTVRVRVDIGPGQVRVLAEPDGAPAAVAAADGKYRGKEQAAASVGSGGDVISVEAPPGARGGTAEGTAHPAAASSKGATGEDXXXXXXXXEGVVGQPGGKSEQAGASAVAAGKGGVYGGESPGDVAEPAAPEEAVEKTDESTAEGAVTAAAAVAASEGELLAEGLYSSGVLVALDPARPTIFKLTVGAAVGGGGK---------TP--AVFLLGATDGRQRDVLALTLRGRRLAALGPEVSVDDFPEETKAQRAEEDYLNLKAAAANFARAYDEDGMSAAEKTG 1701
            +GGFGL QG GG+  XXXXXX D        GVGEGGKAFVEGASKALA+NRER+MGWMKELRPKDW+PKE E    VEEESIQELRRAVRRLYLDAPDPA+HTA++VARARP APK A  A E  A G +A  A AA          A  VDRV+GTGAD+ LTKLVWFRSSS  GFAEIKGV GP+YQPSADD+G RICIKCTLAG AL+LGGTG    LSP   G+ RR RH    GR        SPQ +Q Q++FAEVGPIVLDSAVGAEVD+LL+ADG AVF+GLVRRDTPG+TVRVRV++G  Q+RV+A+P G  AA A ADG   G E                 PPG    T E TA  A+    GA  E         E  +    G+ +   A+    G GG     + G    P+A           T++    A A V      +LAEG YSSGVLV L+PARPT  +LTVG   GG            TP   V LLGA DG QRDVLALTLRGRR AALGP ++VDD+PEETKA +A EDYL LKAAAANFA AYDEDG SA  K+G
Sbjct:  301 NGGFGLPQGVGGRGXXXXXXXXDQTVGGATEGVGEGGKAFVEGASKALAVNRERMMGWMKELRPKDWSPKEAERA--VEEESIQELRRAVRRLYLDAPDPAIHTAIIVARARPSAPKSAAAAAEXXAEGPTAEEAAAAVGEVAETPKEAGAVDRVIGTGADKRLTKLVWFRSSSGGGFAEIKGVEGPFYQPSADDLGSRICIKCTLAGTALNLGGTGSGGFLSPTNRGKERRGRH----GRXXXXXXSRSPQRQQDQVSFAEVGPIVLDSAVGAEVDKLLSADGPAVFRGLVRRDTPGETVRVRVEVGREQIRVVAQP-GDAAAAAVADGNSPGAE-----------------PPGV---TVE-TAAAASVQPAGAVAEGSP------EAALATGSGEKDDGAAAEEETGAGGEVAAAADGGKPSPSA-----------TSQDGAEATAVV------VLAEGRYSSGVLVTLEPARPTALRLTVGRRQGGEAAAAVGVSQAPTPPAVVLLLGAVDGIQRDVLALTLRGRRQAALGPGITVDDYPEETKAHQAHEDYLELKAAAANFASAYDEDGTSATSKSG 831          
BLAST of mRNA_P-fluviatile_contig14.2002.1 vs. uniprot
Match: D7FUZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ4_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 1.940e-90
Identity = 212/414 (51.21%), Postives = 240/414 (57.97%), Query Frame = 1
Query:  505 LVWFRSSSSRGFAEIKGVHGPYYQPSADDVGMRICIKCTLAGPALDLGGTGG---LSPAGGGRGRRDRHAGGGGRNSHPLSPQWRQAQITFAEVGPIVLDSAVGAEVDRLLAADGVAVFQGLVRRDTPGDTVRVRVDIGPGQVRVLAEPDGAPAAVAAADGKYRGKEQAAASVGSGGDVISVEAPPGARGGTAEGTAHPAAASSKGATGEDXXXXXXXXEGVVGQPGGKSEQAGASAVAAGKGGVYGGESPGDVAEPAAPEEAVEKTDESTAEGAVTAAAAVAASEGELLAEGLYSSGVLVALDPARPTIFKLTVGAAVGGGGK---------TP--AVFLLGATDGRQRDVLALTLRGRRLAALGPEVSVDDFPEETKAQRAEEDYLNLKAAAANFARAYDEDGMSAAEKTGS 1704
            LVWFRSSS  GFAEIKGV GPYYQPSADD+G RICIKCTLAG AL+ GGTG    LSP  GG+GRR     GGGR S   SPQ +Q Q++FAE GPIVLDS VGAEVD+LL+ADG AVF+GLVRRDTPG+TVRVRV++G  Q+RV+AEP  A    AAADG   G E                 PPG        T   AAA+S               + +    GG  E A A+     + G                                            +LAEG YS GVLV L+PARPT+ +LTVG   GG            TP   V LLGA DG QRDVLALTLRGRR AALGP V+VDD+PEETKA +A EDYL LKAAAANFA AYDEDG SA  ++GS
Sbjct:   11 LVWFRSSSGGGFAEIKGVEGPYYQPSADDLGSRICIKCTLAGTALNFGGTGSGGFLSPTNGGKGRRXXXXXGGGR-SGSRSPQRQQDQVSFAEGGPIVLDSPVGAEVDKLLSADGPAVFRGLVRRDTPGETVRVRVEVGREQIRVVAEPGDA---AAAADGNSPGAE-----------------PPGV-------TVETAAAAS--------------VQPLDDVTGGSPEAALATGSGEKRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLAEGRYSPGVLVTLEPARPTVLRLTVGRGQGGEAAAAVGVRQAPTPPAVVLLLGAVDGIQRDVLALTLRGRRQAALGPGVTVDDYPEETKAHQAHEDYLELKAAAANFASAYDEDGTSATSRSGS 382          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZQ7_9PHAE7.120e-15057.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUZ4_ECTSI1.940e-9051.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:107630..113452 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-01_008740.1
Hectar predicted targeting categoryother localisation
Exons8
Model size2113
Cds size2112
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.2002.1prot_P-fluviatile_contig14.2002.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 107631..113452 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815593.2257066-CDS-P-fluviatile_contig14:107630..1079421622815593.2257066-CDS-P-fluviatile_contig14:107630..107942Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 107631..107942 -
1693562372.8922825-CDS-P-fluviatile_contig14:107630..1079421693562372.8922825-CDS-P-fluviatile_contig14:107630..107942Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 107631..107942 -
1622815593.239313-CDS-P-fluviatile_contig14:108269..1084611622815593.239313-CDS-P-fluviatile_contig14:108269..108461Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 108270..108461 -
1693562372.9034462-CDS-P-fluviatile_contig14:108269..1084611693562372.9034462-CDS-P-fluviatile_contig14:108269..108461Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 108270..108461 -
1622815593.2536366-CDS-P-fluviatile_contig14:109137..1092431622815593.2536366-CDS-P-fluviatile_contig14:109137..109243Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 109138..109243 -
1693562372.9185302-CDS-P-fluviatile_contig14:109137..1092431693562372.9185302-CDS-P-fluviatile_contig14:109137..109243Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 109138..109243 -
1622815593.2642815-CDS-P-fluviatile_contig14:109539..1101201622815593.2642815-CDS-P-fluviatile_contig14:109539..110120Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 109540..110120 -
1693562372.9269896-CDS-P-fluviatile_contig14:109539..1101201693562372.9269896-CDS-P-fluviatile_contig14:109539..110120Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 109540..110120 -
1622815593.2750475-CDS-P-fluviatile_contig14:110401..1105481622815593.2750475-CDS-P-fluviatile_contig14:110401..110548Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 110402..110548 -
1693562372.935236-CDS-P-fluviatile_contig14:110401..1105481693562372.935236-CDS-P-fluviatile_contig14:110401..110548Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 110402..110548 -
1622815593.2855263-CDS-P-fluviatile_contig14:110861..1111311622815593.2855263-CDS-P-fluviatile_contig14:110861..111131Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 110862..111131 -
1693562372.9440396-CDS-P-fluviatile_contig14:110861..1111311693562372.9440396-CDS-P-fluviatile_contig14:110861..111131Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 110862..111131 -
1622815593.295907-CDS-P-fluviatile_contig14:112587..1128231622815593.295907-CDS-P-fluviatile_contig14:112587..112823Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 112588..112823 -
1693562372.954334-CDS-P-fluviatile_contig14:112587..1128231693562372.954334-CDS-P-fluviatile_contig14:112587..112823Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 112588..112823 -
1622815593.3102398-CDS-P-fluviatile_contig14:113184..1134521622815593.3102398-CDS-P-fluviatile_contig14:113184..113452Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 113185..113452 -
1693562372.9632351-CDS-P-fluviatile_contig14:113184..1134521693562372.9632351-CDS-P-fluviatile_contig14:113184..113452Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 113185..113452 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.2002.1

>prot_P-fluviatile_contig14.2002.1 ID=prot_P-fluviatile_contig14.2002.1|Name=mRNA_P-fluviatile_contig14.2002.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=704bp
GVGSSFAGVGAKLRFKFRKPSGGFGLAQGGGGQTTATGGGGADGVGEGGK
AFVEGASKALAMNRERVMGWMKELRPKDWTPKEEESGETVEEESIQELRR
AVRRLYLDAPDPAVHTAMVVARARPPAPKAGEAMEAAAVGGSATTAVAAA
ARGVDRVVGTGADRHLTKLVWFRSSSSRGFAEIKGVHGPYYQPSADDVGM
RICIKCTLAGPALDLGGTGGLSPAGGGRGRRDRHAGGGGRNSHPLSPQWR
QAQITFAEVGPIVLDSAVGAEVDRLLAADGVAVFQGLVRRDTPGDTVRVR
VDIGPGQVRVLAEPDGAPAAVAAADGKYRGKEQAAASVGSGGDVISVEAP
PGARGGTAEGTAHPAAASSKGATGEDETGEEARGEGVVGQPGGKSEQAGA
SAVAAGKGGVYGGESPGDVAEPAAPEEAVEKTDESTAEGAVTAAAAVAAS
EGELLAEGLYSSGVLVALDPARPTIFKLTVGAAVGGGGKTPAVFLLGATD
GRQRDVLALTLRGRRLAALGPEVSVDDFPEETKAQRAEEDYLNLKAAAAN
FARAYDEDGMSAAEKTGSSSSDEDDDDDDDGCGGGSGGGADSGGEFDDDE
EPNSTSCYDTSDDGGEATAREGDSTTESEIGERDSRHSSSSRRGGGDSVG
NAPAANDRGGFSSDGGDGPAEGAGAGALPRREAEGWLLWRRRPGKRPPVV
AAVE
back to top

mRNA from alignment at P-fluviatile_contig14:107630..113452-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.2002.1 ID=mRNA_P-fluviatile_contig14.2002.1|Name=mRNA_P-fluviatile_contig14.2002.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5823bp|location=Sequence derived from alignment at P-fluviatile_contig14:107630..113452- (Porterinema fluviatile SAG_2381)
GGGGTCGGGTCGTCTTTCGCCGGCGTGGGCGCCAAGCTCCGTTTCAAGTT CAGGAAGCCGAGCGGCGGGTTTGGGCTTGCACAAGGCGGTGGTGGCCAGA CGACGGCGACGGGAGGAGGAGGAGCCGATGGCGTGGGAGAGGGCGGGAAG GCATTTGTCGAGGGGGCTTCGAAAGCTCTGGCGATGAACCGCGAGAGAGT GATGGGCTGGATGAAAGAATTGAGACCCAAGGATTGGACCCCAAAGGAAG AGGAATCAGGAGAGACAGGTAAGCGTCATTGTTCGGGGACTTGGGGAAAG TTCCGACGTTGGTCGGAGAAGTCAACCCTCAAGCGTACTTGAAAAACATG TCTGAACGCGCAACGAATGCGAGGCAAGTACACAGCACCATAGCTGGTGG AAATCTGGACTTGGCAGCGTGCCTCTTTCCCTCCCTCCCTCAACCCTCAT TACCTTTCTGTCGCAGCTCCTTCGCCACATCCTCCTCCGGGTCCGAAAAA TTTTTCATCGGTGTTTTCCTTTGTGCACGGCCGCACGGCCCTCCGTTGGG CTGCTGCTGCTGCTGCTTCACTTGTGCTCACCGACATCACGTTCACGCAA CACTCCTCCTCCTCCTCCTCGCGTCGCAGTCGAGGAGGAATCGATCCAGG AGTTGCGTAGGGCGGTGCGGCGTCTCTACCTCGACGCACCCGACCCCGCC GTGCACACGGCTATGGTGGTGGCGCGCGCACGGCCGCCGGCACCAAAGGC GGGCGAGGCGATGGAGGCGGCGGCGGTGGGGGGGTCGGCGACAACGGCAG TAGCAGCAGCAGCTCGCGGTGTAGACCGGGTCGTCGGTACGGGGGCCGAC AGGCATCTCACCAAGGTGGGACTACTATGGGACTACAGCCGTATGGCGTT TCAATACGATGAGGGTTTGGAGGGAGGAAGGGGAGGGTGAGGTGTTCGTT TTGGGACGGTTTGCCGTGTTGAGTGATGGGTCATTTTTAGGCTCTGAAAC TTTGTTTTGCCAGATTCGTCGGAGCGTGTCCGCGGCGGGCCTGAACCGCT TGCACTTCTGCATTCGGCAGATGGGGAGCGGGGGCGTACTCATGTTTTGC ATGCCTTAGTTGTTAGACCATTGACCACGCGTCCTCGAGAGGACGGAGCA TTGTTCCCGCAGGATCGACCACCGATGGCCAATCGTTCCTTCCTACTTTG CCAAAGGTGGCTCAAAAATGTTTTCCCTAAACTGTCTACTTTATACCTGT CCGTCCTGGGCCACATCTTACACCCGAGTACCGCTACCGTCTTCTCCTCT TTGTTCCATGCCTCAAACTTCTCTCTATACCGACTGTCTACTTTTTCCAG CTCAACGATGTACCCTTCTCTCTCCTGATCGTACAACGGGCATTCCGCAA CTACATGTACCCGGTCTTCGCATTCGGCGCCGCAGTCACATTTGAACTTG TCTTCGTCGTCGTCTACCTTCCTAAACCTCCTTCTACGTTCCCGAAGGTC AATGTCGCCCGTTCTAAATTTGACCTTCATCTTTGTCCCTTCATCCAATG GTCCGTTCAGGTACTCCTTGAACCCTATTCCTTCGTTCAGCCTTCCGTAC ACTTCTAGAACCTCCTTTTCCTTGGTCTCTTTCCGCAAGCTTTGGTCTTC TCTATTTTCAAAGGCTTCTGAGATGCTCTTCTTGTACCCTTCTAAGCTTT CCGCTCCCGTCGTCTCCCGTTCGTCAATATCTAACCCACTCCACACTCCC TGTACAACCGGGGGCGTACTCATGTTTTGCATGCCTTAGTTGTTAGACCA TTGACCACGCGTCCTCGAAGGACGGAGCATTGTTCCCGCAGGATGGACCA CCGATGGCCAATCGCTCCTTCCTACTTTGCCAAAGGTGGCTCAAAAATGT TTTCCCTAACCTGTCTACTTTATACTTGTCCTTCCTGGGCCACATATTAC ACCCGAGCACCGCTACCGTCTTCTCTTTGTTCCATGCCTCAAACTTCTCT CTATACCGACTGTCTACTTTTTCCAGCTCAACCATGTACCCTTCTCTCTC CTGATCGTATAACGGGCATTCTGCAACTACATGTACCCGGTCTTCGCATA TATGGGGAGCGGGGGGCAATACGTGCATTTTGCTCCAAACAAACAAAAAT CTTAACTCAACGTCGCTTCAATATTTCCATCACGTCCGTACCCGCGGCTC TTCTCCCTCTCCTCGAAATTGCCCTTACGCTTTCACCGGAACAACGACGG CCGCCCCTGACGTGGGACACGCTCCGTGACGCGTCCCGCGGCTCAAAAAC GCTGAACCGAAAACACGGCAGCTGGTCTGGTTTCGGTCCTCTTCCAGCAG GGGCTTCGCCGAGATCAAGGGCGTCCACGGCCCGTACTACCAGCCCAGTG CTGACGACGTTGGTATGCGTATCTGCATCAAGTGCACGCTCGCGGGGCCG GCGCTCGATCTCGGTGGCACCGGCGGTCTGTCGCCGGCGGGGGGCGGCAG GGGAAGACGCGACCGTCACGCTGGTGGCGGCGGTAGAAACTCGCACCCGC TGAGCCCCCAATGGCGCCAGGCTCAGATAACGTTTGCTGAGGTAAGAGTG CGAGCGGCGGCTTGTGATCAGGTAGTGTAAGGAGCTTCCTCGACAGCTTT GTGCCGGCCTGCGGGATGCTTGCTTTTGCATTGTTTGTTTGAACAATAGT CAAGCGCCGAGTCGCCCGTTTCTTCCGCCCGATTAGGTTTTGCGTCTCGC TCTGTTAGTCTGTGGTGCGACAGCATAGGGCTGGTGGCCTTGTAGTCCTC CAATACAGCAGCTTTTGCCAGACACATGTCCCACGTTCTTCGTGCTTGTG TTGTTTGCCCTGTTTTGGCTCGTTTCTCTCTCGCCCGTGTGCTGTCCCAA AAAGGTGGGCCCAATCGTTTTGGACTCGGCGGTCGGGGCGGAGGTGGACA GGCTCCTGGCGGCGGATGGCGTGGCGGTGTTCCAAGGGCTCGTCAGGAGA GACACCCCGGGCGATACCGTGCGCGTCCGTGTCGACATTGGGCCAGGGCA GGTAGCACTTTGTTACGATGGTTGATTGCTTGTTGTGTGTTATATGTTGT GCGGCGTGCTTCTTGTTGCCGTTATGATTATGGTTGTGGTTACGGTTATG GCTGTTGTGGTTGTTGTTGTTGTTGTTGAGTTGTTGTTGTTGTCATTGTT GTTGTTATTGTTGTTGCTGTTGCTGTTGCTGTTCCTGTTGTTGTTGTGTT GTTGCCGTTTTTCAGATTCCGTTTTAACATTCCGTGTGCTCGCTGGTCCG TTTTACACGCCGGTCTTGGGTGACAAACGAAGGTCCGTGTGCTGGCAGAG CCTGACGGCGCCCCCGCCGCCGTCGCCGCTGCCGACGGCAAGTACCGAGG AAAAGAGCAGGCCGCTGCTAGCGTAGGCAGTGGCGGCGACGTGATATCGG TGGAGGCACCACCCGGCGCACGAGGCGGCACCGCGGAAGGAACGGCGCAT CCAGCAGCGGCGAGCTCAAAGGGTGCGACCGGGGAGGACGAGACAGGTGA AGAGGCTCGAGGCGAGGGAGTCGTCGGGCAGCCGGGTGGCAAATCTGAGC AAGCGGGTGCTTCAGCCGTCGCCGCCGGGAAGGGCGGGGTTTACGGCGGC GAAAGCCCGGGGGATGTCGCGGAGCCGGCTGCCCCTGAGGAAGCTGTTGA GAAGACGGATGAGTCGACGGCGGAAGGGGCGGTGACGGCAGCAGCAGCGG TAGCTGCAAGCGAGGGGGAACTTTTGGCCGAAGGTCTGTACTCGTCCGGC GTGCTGGTGGCCCTAGACCCGGCACGGCCGACAATTTTCAAGCTCACAGT CGGGGCGGCAGTGGGCGGCGGAGGCAAGACCCCTGCCGTCTTCCTGTTGG GAGCGACTGACGGGTGAGTACAGAACGAGTTGAACACAGCCTGTGCAAGC GGTTCTCGGTTGCAATATGATTAAACAGATGGTAGTGCCCGGGATAAAAC TGGTTCTGGCCTTGAGCTACCAGTGGACCTCTGCCAGAAGTGCAAACGGA CACACGGGCAAGGAGTTGGGATGTCCTGCGATTTTGCAGAGGAGGCCGAG GCCGCAGCGATTGCTTGCGAGTGCATCCCGCGGTGGGCTGTGATATCCCG TTCACCCTCCCTCCCTTGCTCCTTCCCTTCCCTCCTCTCCTTGGTGATGC ACAAACCAGACGCCAGCGGGATGTGCTGGCGCTGACCCTGAGAGGGCGCA GACTGGCCGCCCTGGGCCCTGAGGTTTCCGTCGACGACTTTCCTGAGGAA ACGAAGGCCCAACGAGTGCGTGGTCGCTTCCGGCGTCTCTAGATCCTGTA GTGTTTTTCCTCCATGGATGTTGCTAAACCCACGTAGACACTCTAAATTT TTTCTGTGCGAAGTTCGAAGCGCAGGCGAAAGCCGTTGCAGCCACTACCT GAGGGTTTTCTTCGGGAATGAGGTTTTGCGCGATTCCCTCGATCACTAGA TTCTTGTGTGCCCACGTTTTGAGCCGCTGCTGCAATTCAGCACGGGTATC GATGCTTTCATGGGATGCTCGTTCCGTGCTTGCCTTCGCTCTCCCCGAAA CGCTTGACTCAACTACCTATCTGCGCACGCTGCAGCTTCCCCCTCTCCTC CGTTCTCCTCCCTCTGTAACTCGTTTTGGGTAAAACTTTCGAAACTGTGA CTCTACGGGTCGAGCCCTCGAGCTCTCATTCGCGACTATCGTGTCAAACT TTGCGAGTGTTCGGTTTTGCTAATGGCGTAGGCAGAGGGACAGTGCTTTC GAATGAGTCATGTCGCTTGATCCGCGAGCCACCCGAGACATGTACATTTT GCCCAAAACTCTCCGCAACAGTCGGATTGGAAGTGTGGTCGAATGATCAA TAGAAGTCCGAACTAAGAAAACAACGCTAGTCGCGCGACTCACCCGACGT GCTTCACATGGCCTACCGGGCGCGCGAACACACTTGCATAGGCTGAAGAG GATTACCTGAACCTCAAGGCGGCGGCGGCGAATTTTGCCAGAGCTTACGA CGAGGACGGCATGAGCGCGGCAGAAAAGACCGGCAGCAGCAGCAGCGACG AAGACGACGACGATGACGACGACGGGTGTGGCGGCGGCAGCGGCGGGGGC GCCGACAGCGGCGGCGAATTCGACGACGATGAAGTGAGTGAAAAACAAAC GCAAAGCAGCTCACTCAGGAGGCTGAGGAATGGCTTGTTCGTGTCTGTTG ATTATTGTTGGCGCATATTGAATGACGGAAGGAGGACGAGGTTCGGGGCG AGACGAAGAGGGCCAAAACATTCGGAGCAATCGGTAGTGCCGAGAGTCAA CGGTCACCCACCGCACACTCAGAGCGCGCGACCTGCGAAACCGAAAACGC TGCTCTTGTGGTCTTTCGAATGGCGATTGCTCGAAATAGCATGGCCCGCA CCCCTTGAAATGAAGTCGGAACCGCCTTGGTCTGTCCCTTTTTTTCACGA TTGGCCACAGGAGCCAAATTCCACCAGCTGCTACGACACTTCCGACGACG GCGGCGAGGCGACGGCGCGAGAGGGGGACTCCACCACCGAAAGCGAAATC GGAGAGAGGGATAGCCGTCACTCCTCCTCAAGCCGCCGCGGCGGCGGCGA TTCTGTGGGTAACGCCCCTGCCGCCAACGATCGGGGGGGTTTCTCGTCCG ACGGGGGCGATGGCCCGGCGGAAGGAGCAGGGGCCGGAGCCCTGCCGCGA AGGGAGGCGGAGGGGTGGTTGTTGTGGCGGCGGCGCCCTGGGAAAAGGCC GCCGGTGGTGGCGGCGGTGGAAA
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig14:107630..113452-

>mRNA_P-fluviatile_contig14.2002.1 ID=mRNA_P-fluviatile_contig14.2002.1|Name=mRNA_P-fluviatile_contig14.2002.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4224bp|location=Sequence derived from alignment at P-fluviatile_contig14:107630..113452- (Porterinema fluviatile SAG_2381)
GGGGTCGGGTCGTCTTTCGCCGGCGTGGGCGCCAAGCTCCGTTTCAAGTT
CAGGAAGCCGAGCGGCGGGTTTGGGCTTGCACAAGGCGGTGGTGGCCAGA
CGACGGCGACGGGAGGAGGAGGAGCCGATGGCGTGGGAGAGGGCGGGAAG
GCATTTGTCGAGGGGGCTTCGAAAGCTCTGGCGATGAACCGCGAGAGAGT
GATGGGCTGGATGAAAGAATTGAGACCCAAGGATTGGACCCCAAAGGAAG
AGGAATCAGGAGAGACAGGGGGTCGGGTCGTCTTTCGCCGGCGTGGGCGC
CAAGCTCCGTTTCAAGTTCAGGAAGCCGAGCGGCGGGTTTGGGCTTGCAC
AAGGCGGTGGTGGCCAGACGACGGCGACGGGAGGAGGAGGAGCCGATGGC
GTGGGAGAGGGCGGGAAGGCATTTGTCGAGGGGGCTTCGAAAGCTCTGGC
GATGAACCGCGAGAGAGTGATGGGCTGGATGAAAGAATTGAGACCCAAGG
ATTGGACCCCAAAGGAAGAGGAATCAGGAGAGACAGTCGAGGAGGAATCG
ATCCAGGAGTTGCGTAGGGCGGTGCGGCGTCTCTACCTCGACGCACCCGA
CCCCGCCGTGCACACGGCTATGGTGGTGGCGCGCGCACGGCCGCCGGCAC
CAAAGGCGGGCGAGGCGATGGAGGCGGCGGCGGTGGGGGGGTCGGCGACA
ACGGCAGTAGCAGCAGCAGCTCGCGGTGTAGACCGGGTCGTCGGTACGGG
GGCCGACAGGCATCTCACCAAGTCGAGGAGGAATCGATCCAGGAGTTGCG
TAGGGCGGTGCGGCGTCTCTACCTCGACGCACCCGACCCCGCCGTGCACA
CGGCTATGGTGGTGGCGCGCGCACGGCCGCCGGCACCAAAGGCGGGCGAG
GCGATGGAGGCGGCGGCGGTGGGGGGGTCGGCGACAACGGCAGTAGCAGC
AGCAGCTCGCGGTGTAGACCGGGTCGTCGGTACGGGGGCCGACAGGCATC
TCACCAAGCTGGTCTGGTTTCGGTCCTCTTCCAGCAGGGGCTTCGCCGAG
ATCAAGGGCGTCCACGGCCCGTACTACCAGCCCAGTGCTGACGACGTTGG
TATGCGTATCTGCATCAAGTGCACGCTCGCGGGGCCGGCGCTCGATCTCG
GTGGCACCGGCGGTCTGTCGCCGGCGGGGGGCGGCAGGGGAAGACGCGAC
CGTCACGCTGGTGGCGGCGGTAGAAACTCGCACCCGCTGAGCCCCCAATG
GCGCCAGGCTCAGATAACGTTTGCTGAGCTGGTCTGGTTTCGGTCCTCTT
CCAGCAGGGGCTTCGCCGAGATCAAGGGCGTCCACGGCCCGTACTACCAG
CCCAGTGCTGACGACGTTGGTATGCGTATCTGCATCAAGTGCACGCTCGC
GGGGCCGGCGCTCGATCTCGGTGGCACCGGCGGTCTGTCGCCGGCGGGGG
GCGGCAGGGGAAGACGCGACCGTCACGCTGGTGGCGGCGGTAGAAACTCG
CACCCGCTGAGCCCCCAATGGCGCCAGGCTCAGATAACGTTTGCTGAGGT
GGGCCCAATCGTTTTGGACTCGGCGGTCGGGGCGGAGGTGGACAGGCTCC
TGGCGGCGGATGGCGTGGCGGTGTTCCAAGGGCTCGTCAGGAGAGACACC
CCGGGCGATACCGTGCGCGTCCGTGTCGACATTGGGCCAGGGCAGGTGGG
CCCAATCGTTTTGGACTCGGCGGTCGGGGCGGAGGTGGACAGGCTCCTGG
CGGCGGATGGCGTGGCGGTGTTCCAAGGGCTCGTCAGGAGAGACACCCCG
GGCGATACCGTGCGCGTCCGTGTCGACATTGGGCCAGGGCAGGTCCGTGT
GCTGGCAGAGCCTGACGGCGCCCCCGCCGCCGTCGCCGCTGCCGACGGCA
AGTACCGAGGAAAAGAGCAGGCCGCTGCTAGCGTAGGCAGTGGCGGCGAC
GTGATATCGGTGGAGGCACCACCCGGCGCACGAGGCGGCACCGCGGAAGG
AACGGCGCATCCAGCAGCGGCGAGCTCAAAGGGTGCGACCGGGGAGGACG
AGACAGGTGAAGAGGCTCGAGGCGAGGGAGTCGTCGGGCAGCCGGGTGGC
AAATCTGAGCAAGCGGGTGCTTCAGCCGTCGCCGCCGGGAAGGGCGGGGT
TTACGGCGGCGAAAGCCCGGGGGATGTCGCGGAGCCGGCTGCCCCTGAGG
AAGCTGTTGAGAAGACGGATGAGTCGACGGCGGAAGGGGCGGTGACGGCA
GCAGCAGCGGTAGCTGCAAGCGAGGGGGAACTTTTGGCCGAAGGTCTGTA
CTCGTCCGGCGTGCTGGTGGCCCTAGACCCGGCACGGCCGACAATTTTCA
AGCTCACAGTCGGGGCGGCAGTGGGCGGCGGAGGCAAGACCCCTGCCGTC
TTCCTGTTGGGAGCGACTGACGGGTCCGTGTGCTGGCAGAGCCTGACGGC
GCCCCCGCCGCCGTCGCCGCTGCCGACGGCAAGTACCGAGGAAAAGAGCA
GGCCGCTGCTAGCGTAGGCAGTGGCGGCGACGTGATATCGGTGGAGGCAC
CACCCGGCGCACGAGGCGGCACCGCGGAAGGAACGGCGCATCCAGCAGCG
GCGAGCTCAAAGGGTGCGACCGGGGAGGACGAGACAGGTGAAGAGGCTCG
AGGCGAGGGAGTCGTCGGGCAGCCGGGTGGCAAATCTGAGCAAGCGGGTG
CTTCAGCCGTCGCCGCCGGGAAGGGCGGGGTTTACGGCGGCGAAAGCCCG
GGGGATGTCGCGGAGCCGGCTGCCCCTGAGGAAGCTGTTGAGAAGACGGA
TGAGTCGACGGCGGAAGGGGCGGTGACGGCAGCAGCAGCGGTAGCTGCAA
GCGAGGGGGAACTTTTGGCCGAAGGTCTGTACTCGTCCGGCGTGCTGGTG
GCCCTAGACCCGGCACGGCCGACAATTTTCAAGCTCACAGTCGGGGCGGC
AGTGGGCGGCGGAGGCAAGACCCCTGCCGTCTTCCTGTTGGGAGCGACTG
ACGGACGCCAGCGGGATGTGCTGGCGCTGACCCTGAGAGGGCGCAGACTG
GCCGCCCTGGGCCCTGAGGTTTCCGTCGACGACTTTCCTGAGGAAACGAA
GGCCCAACGAACGCCAGCGGGATGTGCTGGCGCTGACCCTGAGAGGGCGC
AGACTGGCCGCCCTGGGCCCTGAGGTTTCCGTCGACGACTTTCCTGAGGA
AACGAAGGCCCAACGAGCTGAAGAGGATTACCTGAACCTCAAGGCGGCGG
CGGCGAATTTTGCCAGAGCTTACGACGAGGACGGCATGAGCGCGGCAGAA
AAGACCGGCAGCAGCAGCAGCGACGAAGACGACGACGATGACGACGACGG
GTGTGGCGGCGGCAGCGGCGGGGGCGCCGACAGCGGCGGCGAATTCGACG
ACGATGAAGCTGAAGAGGATTACCTGAACCTCAAGGCGGCGGCGGCGAAT
TTTGCCAGAGCTTACGACGAGGACGGCATGAGCGCGGCAGAAAAGACCGG
CAGCAGCAGCAGCGACGAAGACGACGACGATGACGACGACGGGTGTGGCG
GCGGCAGCGGCGGGGGCGCCGACAGCGGCGGCGAATTCGACGACGATGAA
GAGCCAAATTCCACCAGCTGCTACGACACTTCCGACGACGGCGGCGAGGC
GACGGCGCGAGAGGGGGACTCCACCACCGAAAGCGAAATCGGAGAGAGGG
ATAGCCGTCACTCCTCCTCAAGCCGCCGCGGCGGCGGCGATTCTGTGGGT
AACGCCCCTGCCGCCAACGATCGGGGGGGTTTCTCGTCCGACGGGGGCGA
TGGCCCGGCGGAAGGAGCAGGGGCCGGAGCCCTGCCGCGAAGGGAGGCGG
AGGGGTGGTTGTTGTGGCGGCGGCGCCCTGGGAAAAGGCCGCCGGTGGTG
GCGGCGGTGGAAGAGCCAAATTCCACCAGCTGCTACGACACTTCCGACGA
CGGCGGCGAGGCGACGGCGCGAGAGGGGGACTCCACCACCGAAAGCGAAA
TCGGAGAGAGGGATAGCCGTCACTCCTCCTCAAGCCGCCGCGGCGGCGGC
GATTCTGTGGGTAACGCCCCTGCCGCCAACGATCGGGGGGGTTTCTCGTC
CGACGGGGGCGATGGCCCGGCGGAAGGAGCAGGGGCCGGAGCCCTGCCGC
GAAGGGAGGCGGAGGGGTGGTTGTTGTGGCGGCGGCGCCCTGGGAAAAGG
CCGCCGGTGGTGGCGGCGGTGGAA
back to top