mRNA_P-fluviatile_contig14.2002.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig14.2002.1 vs. uniprot
Match: A0A6H5JZQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ7_9PHAE) HSP 1 Score: 479 bits (1232), Expect = 7.120e-150 Identity = 333/582 (57.22%), Postives = 377/582 (64.78%), Query Frame = 1
Query: 61 SGGFGLAQGGGGQTTXXXXXXAD--------GVGEGGKAFVEGASKALAMNRERVMGWMKELRPKDWTPKEEESGETVEEESIQELRRAVRRLYLDAPDPAVHTAMVVARARPPAPK-AGEAMEAAAVGGSATTAVAAA---------ARGVDRVVGTGADRHLTKLVWFRSSSSRGFAEIKGVHGPYYQPSADDVGMRICIKCTLAGPALDLGGTGG---LSPAGGGRGRRDRHAGGGGRNSHPL---SPQWRQAQITFAEVGPIVLDSAVGAEVDRLLAADGVAVFQGLVRRDTPGDTVRVRVDIGPGQVRVLAEPDGAPAAVAAADGKYRGKEQAAASVGSGGDVISVEAPPGARGGTAEGTAHPAAASSKGATGEDXXXXXXXXEGVVGQPGGKSEQAGASAVAAGKGGVYGGESPGDVAEPAAPEEAVEKTDESTAEGAVTAAAAVAASEGELLAEGLYSSGVLVALDPARPTIFKLTVGAAVGGGGK---------TP--AVFLLGATDGRQRDVLALTLRGRRLAALGPEVSVDDFPEETKAQRAEEDYLNLKAAAANFARAYDEDGMSAAEKTG 1701
+GGFGL QG GG+ XXXXXX D GVGEGGKAFVEGASKALA+NRER+MGWMKELRPKDW+PKE E VEEESIQELRRAVRRLYLDAPDPA+HTA++VARARP APK A A E A G +A A AA A VDRV+GTGAD+ LTKLVWFRSSS GFAEIKGV GP+YQPSADD+G RICIKCTLAG AL+LGGTG LSP G+ RR RH GR SPQ +Q Q++FAEVGPIVLDSAVGAEVD+LL+ADG AVF+GLVRRDTPG+TVRVRV++G Q+RV+A+P G AA A ADG G E PPG T E TA A+ GA E E + G+ + A+ G GG + G P+A T++ A A V +LAEG YSSGVLV L+PARPT +LTVG GG TP V LLGA DG QRDVLALTLRGRR AALGP ++VDD+PEETKA +A EDYL LKAAAANFA AYDEDG SA K+G
Sbjct: 301 NGGFGLPQGVGGRGXXXXXXXXDQTVGGATEGVGEGGKAFVEGASKALAVNRERMMGWMKELRPKDWSPKEAERA--VEEESIQELRRAVRRLYLDAPDPAIHTAIIVARARPSAPKSAAAAAEXXAEGPTAEEAAAAVGEVAETPKEAGAVDRVIGTGADKRLTKLVWFRSSSGGGFAEIKGVEGPFYQPSADDLGSRICIKCTLAGTALNLGGTGSGGFLSPTNRGKERRGRH----GRXXXXXXSRSPQRQQDQVSFAEVGPIVLDSAVGAEVDKLLSADGPAVFRGLVRRDTPGETVRVRVEVGREQIRVVAQP-GDAAAAAVADGNSPGAE-----------------PPGV---TVE-TAAAASVQPAGAVAEGSP------EAALATGSGEKDDGAAAEEETGAGGEVAAAADGGKPSPSA-----------TSQDGAEATAVV------VLAEGRYSSGVLVTLEPARPTALRLTVGRRQGGEAAAAVGVSQAPTPPAVVLLLGAVDGIQRDVLALTLRGRRQAALGPGITVDDYPEETKAHQAHEDYLELKAAAANFASAYDEDGTSATSKSG 831
BLAST of mRNA_P-fluviatile_contig14.2002.1 vs. uniprot
Match: D7FUZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ4_ECTSI) HSP 1 Score: 301 bits (770), Expect = 1.940e-90 Identity = 212/414 (51.21%), Postives = 240/414 (57.97%), Query Frame = 1
Query: 505 LVWFRSSSSRGFAEIKGVHGPYYQPSADDVGMRICIKCTLAGPALDLGGTGG---LSPAGGGRGRRDRHAGGGGRNSHPLSPQWRQAQITFAEVGPIVLDSAVGAEVDRLLAADGVAVFQGLVRRDTPGDTVRVRVDIGPGQVRVLAEPDGAPAAVAAADGKYRGKEQAAASVGSGGDVISVEAPPGARGGTAEGTAHPAAASSKGATGEDXXXXXXXXEGVVGQPGGKSEQAGASAVAAGKGGVYGGESPGDVAEPAAPEEAVEKTDESTAEGAVTAAAAVAASEGELLAEGLYSSGVLVALDPARPTIFKLTVGAAVGGGGK---------TP--AVFLLGATDGRQRDVLALTLRGRRLAALGPEVSVDDFPEETKAQRAEEDYLNLKAAAANFARAYDEDGMSAAEKTGS 1704
LVWFRSSS GFAEIKGV GPYYQPSADD+G RICIKCTLAG AL+ GGTG LSP GG+GRR GGGR S SPQ +Q Q++FAE GPIVLDS VGAEVD+LL+ADG AVF+GLVRRDTPG+TVRVRV++G Q+RV+AEP A AAADG G E PPG T AAA+S + + GG E A A+ + G +LAEG YS GVLV L+PARPT+ +LTVG GG TP V LLGA DG QRDVLALTLRGRR AALGP V+VDD+PEETKA +A EDYL LKAAAANFA AYDEDG SA ++GS
Sbjct: 11 LVWFRSSSGGGFAEIKGVEGPYYQPSADDLGSRICIKCTLAGTALNFGGTGSGGFLSPTNGGKGRRXXXXXGGGR-SGSRSPQRQQDQVSFAEGGPIVLDSPVGAEVDKLLSADGPAVFRGLVRRDTPGETVRVRVEVGREQIRVVAEPGDA---AAAADGNSPGAE-----------------PPGV-------TVETAAAAS--------------VQPLDDVTGGSPEAALATGSGEKRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLAEGRYSPGVLVTLEPARPTVLRLTVGRGQGGEAAAAVGVRQAPTPPAVVLLLGAVDGIQRDVLALTLRGRRQAALGPGVTVDDYPEETKAHQAHEDYLELKAAAANFASAYDEDGTSATSRSGS 382 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.2002.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig14.2002.1 >prot_P-fluviatile_contig14.2002.1 ID=prot_P-fluviatile_contig14.2002.1|Name=mRNA_P-fluviatile_contig14.2002.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=704bp GVGSSFAGVGAKLRFKFRKPSGGFGLAQGGGGQTTATGGGGADGVGEGGKback to top mRNA from alignment at P-fluviatile_contig14:107630..113452- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig14.2002.1 ID=mRNA_P-fluviatile_contig14.2002.1|Name=mRNA_P-fluviatile_contig14.2002.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5823bp|location=Sequence derived from alignment at P-fluviatile_contig14:107630..113452- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig14:107630..113452- >mRNA_P-fluviatile_contig14.2002.1 ID=mRNA_P-fluviatile_contig14.2002.1|Name=mRNA_P-fluviatile_contig14.2002.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4224bp|location=Sequence derived from alignment at P-fluviatile_contig14:107630..113452- (Porterinema fluviatile SAG_2381)back to top |