mRNA_P-fluviatile_contig14.1997.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.1997.1
Unique NamemRNA_P-fluviatile_contig14.1997.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig14.1997.1 vs. uniprot
Match: A0A6H5JVE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE3_9PHAE)

HSP 1 Score: 379 bits (972), Expect = 1.020e-116
Identity = 192/222 (86.49%), Postives = 207/222 (93.24%), Query Frame = 1 
Query: 2302 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVSVTLVGNEANKTFCALFHDREDGATFGRLIASEILNAFLEEHARDIKEATSLNLRDFRAFKHRIPGVVRKSVKPVLEKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAHAGNGCVSMSLESSSNSRILIWRIDVWTLVIAVHKSANRNRYQKHIDEAIGVLQKVLELTFSISHL 2967
            QPRLLGSLLTAMVEFSKVAAGMQVAYVELT V VTLVGNEA  TFCALFHDR DGATFGRLIASEILNAFLE HA+DIKEA+SLNL+DF AFK+RIPG+VRKSV+PVL KLVHVKGILRC LVTETSETFQTAEIDQLGLLANLQAL+ +STDIMA AGNGCVSMSLESSSNSRILIWRID WTLV+AVHK+ANRNRYQKHIDEA+GVLQKVL+LT ++  +
Sbjct:   25 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTSVGVTLVGNEATNTFCALFHDRGDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIVRKSVQPVLGKLVHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLVMAVHKAANRNRYQKHIDEAVGVLQKVLDLTITLGXI 246
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BLAST of mRNA_P-fluviatile_contig14.1997.1 vs. uniprot
Match: D7FUY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUY6_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 1.000e-101
Identity = 173/191 (90.58%), Postives = 181/191 (94.76%), Query Frame = 1 
Query: 2302 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVSVTLVGNEANKTFCALFHDREDGATFGRLIASEILNAFLEEHARDIKEATSLNLRDFRAFKHRIPGVVRKSVKPVLEKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAHAGNGCVSMSLESSSNSRILIWRIDVWTLVIAVHK 2874
            QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGV VTLVGNEA  TFCALFHDREDGATFGRLIASEILNAFLE HA+DIKEA+SLNL+DF AFK+RIPG+VRKSV+PVL KLVHVKGILRC LVTETSETFQTAEIDQLGLLANLQAL+ +STDIMA AGNGCVSMSLESSSNSRILIWRID WTLVIAVHK
Sbjct:  112 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVGVTLVGNEATNTFCALFHDREDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIVRKSVQPVLGKLVHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLVIAVHK 302
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BLAST of mRNA_P-fluviatile_contig14.1997.1 vs. uniprot
Match: A0A835YZ72_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ72_9STRA)

HSP 1 Score: 221 bits (563), Expect = 1.340e-61
Identity = 114/221 (51.58%), Postives = 161/221 (72.85%), Query Frame = 1 
Query: 2302 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVSVTLVGNEANKTFCALFHDREDGATFGRLIASEILNAFLEEHARDIKEATSLNLRDFRAFKHRIPGVVRKSVKPVLEKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAHAGNGCVSMSLESSS--NSRILIWRIDVWTLVIAVHKSANRNRYQKHIDEAIGVLQKVLELTFSI 2958
            QPR++GSLL AM+EFS V AGM V+Y+ELTG+ VT+V NEA K FCALF DREDGA FGRL+A+EIL  F +E+A ++  A +LNL DF  F  ++   ++++ +PVL +LV   G+L+  L+TE+S+TFQTA+IDQLGLLANL AL  LSTDIMAH G+   +++LE  +  NSR+L+WR++  TLV+A  ++     YQ  +DEA+ +L ++  +  S+
Sbjct:   26 QPRMVGSLLIAMLEFSMVTAGMPVSYIELTGLGVTVVWNEAAKVFCALFLDREDGADFGRLLATEILAGFQDEYANELGSA-ALNLVDFSGFHSKLLDAIQRTAQPVLGRLVQAHGVLKAVLITESSQTFQTADIDQLGLLANLGALAGLSTDIMAHCGDSVRTLTLEGDARGNSRVLVWRVEQSTLVVAASRAVTPAHYQPAVDEAVDMLLRLARVLGSL 245
[Close]
BLAST of mRNA_P-fluviatile_contig14.1997.1 vs. uniprot
Match: A0A7R9UFX6_9STRA (Hypothetical protein n=2 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7R9UFX6_9STRA)

HSP 1 Score: 211 bits (536), Expect = 5.990e-58
Identity = 109/225 (48.44%), Postives = 158/225 (70.22%), Query Frame = 1 
Query: 2302 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVSVTLVGNEANKTFCALFHDREDGATFGRLIASEILNAFLEEHARDIKEATSLNLRDFRAFKHRIPGVVRKSVKPVLEKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAHAGNGCVSMSLESSSNSRILIWRIDVWTLVIAVHKSANRNRYQKHIDEAIGVLQKVLELTFSISHLSVR 2976
            QPRL+GSLLT MVEFS +AAGM ++Y+EL GVSVT+V +EA K FCALFHDREDG TFGRLI +E+L  F++  + +I  +   NL+DF  +   I   +R +V PVL K+   +G++   L+TE +E     ++D++G+LANLQ L+S +TDI+AH  + C+ ++LE SS+SRIL+WRID   LV++V K  N  +Y+  ++EA  +L+KV+ L  ++ HL  R
Sbjct:   26 QPRLMGSLLTTMVEFSAMAAGMPISYIELGGVSVTIVLHEAAKVFCALFHDREDGPTFGRLICTEMLYRFIDRFSSEIG-SPGHNLKDFHDYHREIADAIRNAVNPVLAKVQAQRGVILALLITEDAEVHPQTDVDKIGVLANLQPLLSSATDILAHHDDSCLHLALEGSSHSRILLWRIDRAVLVVSVSKQVNSVKYRAAVEEARDMLEKVVYLVSNL-HLVTR 248
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BLAST of mRNA_P-fluviatile_contig14.1997.1 vs. uniprot
Match: A0A0P1A6Z4_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6Z4_PLAHL)

HSP 1 Score: 175 bits (443), Expect = 1.800e-45
Identity = 92/224 (41.07%), Postives = 146/224 (65.18%), Query Frame = 1 
Query: 2302 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVSVTLVGNEANKTFCALFHDREDGATFGRLIASEILNAFLEEHARDIKEATSLNLRDFRAFKHRIPGVVRKSVKPVLEKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAHAGNGCVSMSLESSSNSRILIWRIDVWTLVIAVHKS-ANRNRYQKHIDEAIGVLQKVLELTFSISHLS 2970
            QPRL+GSL+TAM+EFS  A+G  V+Y++++ V+VT++ N+ +K FCA+FHD  DGA++   +A E+L AF+ +H  ++      NLRDF  F++RI  V+R SVKPV+ KL   +GIL+  LV + + T  T ++D +G+LANLQAL++ S D+M+ +G+   SM+++S  NS I +  ++    +I VHK  A  ++    IDE +  L+ V  L  ++   S
Sbjct:   26 QPRLVGSLITAMLEFSNKASGAPVSYIQMSSVAVTMITNDKHKVFCAMFHDTTDGASYSAFVAQELLTAFIAQHGDELGNMGH-NLRDFHRFQYRILSVIRDSVKPVVRKLQKQRGILKAMLVVDGAVTCATGDVDPIGVLANLQALVNSSIDMMSFSGDDVSSMTIQSGRNSCIQVSVVEGTDALIVVHKKGAQTSKNTAAIDECVRALRHVCALARTLQQNS 248
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BLAST of mRNA_P-fluviatile_contig14.1997.1 vs. uniprot
Match: A0A485KWW7_9STRA (Aste57867_12638 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWW7_9STRA)

HSP 1 Score: 171 bits (434), Expect = 2.410e-44
Identity = 93/212 (43.87%), Postives = 140/212 (66.04%), Query Frame = 1 
Query: 2302 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVSVTLVGNEANKTFCALFHDREDGATFGRLIASEILNAFLEEHARDIKEATSLNLRDFRAFKHRIPGVVRKSVKPVLEKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAHAGNGCVSMSLESSSNSRILIWRIDVWTLVIAVHKSA-NRNRYQKHIDEAIGVLQK 2934
            QPRL+GSLLTA++EFS    G+ V+Y+E + V+VT+V NE  K FCA+F+D  DG  FG  IA EIL AF++E+A D+      NLRDF  F ++I  V+R+SVKP+L  L   +GI +  LVT+ + T+ T ++DQLG+L NLQ+L +L+ D+MA  G+   S++++ + N  I +  I+  TLV+   +   + +     I+EAIG+LQ+
Sbjct:   17 QPRLIGSLLTAILEFSTKTTGVPVSYMEFSNVAVTIVMNETAKVFCAIFYDLADGPKFGAFIAKEILTAFVDEYAADLGNVGH-NLRDFHGFHYKISEVIRESVKPILATLQQQRGIQKAILVTDDTVTYATVDVDQLGVLVNLQSLRTLAGDMMAFVGDNAHSVTMQGARNCNIQVSTIENATLVVVYKQGGPHTSMCVAAINEAIGLLQR 227
[Close]
BLAST of mRNA_P-fluviatile_contig14.1997.1 vs. uniprot
Match: A0A7S2B5T7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5T7_9STRA)

HSP 1 Score: 171 bits (434), Expect = 3.150e-44
Identity = 97/228 (42.54%), Postives = 145/228 (63.60%), Query Frame = 1 
Query: 2299 TQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVSVTLVGNEANKTFCALFHDREDGATFGRLIASEILNAFLEEHARDIKEATSLNLRDFRAFKHRIPGVVRKSVKPVLEKLV--HVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAHAGNGCVSMSLESSSNSRILIWRIDVWTLVIAVHKSANRNRYQKHIDEAIGVLQKVLELTFSISHLSVR 2976
            +QPR++G LLTAM+E S    G+ V Y+EL+ V+VT++ +E  K  CALFHDR DG  FG+LIAS+IL AFLEE++ ++  +   NL+DF  F  +I G VR S++PVL +L   H + I +  LVTE +     + +D+L LLANLQAL+ LS++++A   + C  + LE S + R L+WRI+    ++ V+KS     Y+  ++EA  +L +V     S +HL  R
Sbjct:   26 SQPRMIGGLLTAMMESSVRTTGLPVTYIELSNVAVTIMKDEVVKVCCALFHDRSDGPAFGKLIASQILCAFLEEYSGNLT-SPGRNLKDFHGFHLKIAGAVRNSIRPVLNRLHGHHSRAIQKAMLVTEDAIVQTGSAVDELALLANLQALLYLSSELLAQRDDLCSQIVLEGSGDVRTLLWRIEHAVFIVVVNKSVRPTHYRAALNEAAKMLGQVC-FVMSNNHLIWR 251
[Close]
BLAST of mRNA_P-fluviatile_contig14.1997.1 vs. uniprot
Match: A0A6G0WTP7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTP7_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.220e-42
Identity = 96/226 (42.48%), Postives = 141/226 (62.39%), Query Frame = 1 
Query: 2302 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVSVTLVGNEANKTFCALFHDREDGATFGRLIASEILNAFLEEHARDIKEATSLNLRDFRAFKHRIPGVVRKSVKPVLEKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAHAGNGCVSMSLESSSNSRILIWRIDVWTLVIAVHKSANRNRYQ-KHIDEAIGVLQKVLELTFSISHLSVR 2976
            QPRL+GSLLTA++EFS    G  V+Y+E T V+VT+V NE+ K FCA+F D  DG  FG  +A EIL AF++E+A D+      NLRDF  F ++I  V+R+SVKP+L  L   +GI +  LVT+ + T+ T E+DQLG+L N+Q+L +L+ D MA  G+   S+++  + NS I +  I+  TLV++  +           I+EAI +LQ+V  L   +   +V 
Sbjct:   26 QPRLIGSLLTAILEFSAKTTGAPVSYMEFTNVAVTIVVNESAKVFCAIFFDVADGPKFGAFLAKEILAAFVDEYAGDLGNIGH-NLRDFHGFHYKISEVIRESVKPILSTLQQQRGIQKAILVTDDAVTYATVEVDQLGVLVNMQSLRTLAADTMAFVGDNAHSITILGARNSSIQVRAIENATLVVSFKQGGPYTAVCIAAINEAIFMLQRVCLLLKHLHQTAVH 250
[Close]
BLAST of mRNA_P-fluviatile_contig14.1997.1 vs. uniprot
Match: F0WRA1_9STRA (Uncharacterized protein AlNc14C210G8908 n=2 Tax=Albugo TaxID=65356 RepID=F0WRA1_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.010e-41
Identity = 91/217 (41.94%), Postives = 138/217 (63.59%), Query Frame = 1 
Query: 2299 TQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVSVTLVGNEANKTFCALFHDREDGATFGRLIASEILNAFLEEHARDIKEATSLNLRDFRAFKHRIPGVVRKSVKPVLEKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAHAGNGCVSMSLESS-SNSRILIWRIDVWTLVIAVHKSANRNRYQKHIDEAIGVLQKVLEL 2946
            +QPRL+GSL+TAM+EFS    G+ V+Y++   V+VT+V NEA K FCA+FHD  DGA+F   IA+EIL AF+ E A ++      N+R F  F  RI G++R S++ +L++L   +GIL+   V + S    TAE+DQ+G+LANLQ L++ S D+MA   N   S++++SS S    +I  +D  TL++   K  +  ++   I E + +L+KV  L
Sbjct:   25 SQPRLIGSLMTAMLEFSAKVTGLPVSYIKFAKVAVTVVSNEAAKVFCAMFHDPSDGASFSSFIANEILEAFIVEFAAELGNVGH-NVRQFDRFHLRIVGIIRHSIQRLLKQLQQQRGILKAIFVADGSIIHATAEVDQIGVLANLQVLVNASLDMMAAVNNTVNSVTIQSSRSTCTEVIHVVDDGTLIVVHRKGVSATKHTLAIQECVQMLRKVCGL 240
[Close]
BLAST of mRNA_P-fluviatile_contig14.1997.1 vs. uniprot
Match: K3W537_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W537_GLOUD)

HSP 1 Score: 164 bits (414), Expect = 1.370e-41
Identity = 96/226 (42.48%), Postives = 143/226 (63.27%), Query Frame = 1 
Query: 2302 QPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVSVTLVGNEANKTFCALFHDREDGATFGRLIASEILNAFLEEHARDIKEATSLNLRDFRAFKHRIPGVVRKSVKPVLEKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAHAGNGCVSMSLESSSNSRILIWRID-VWTLVIAVHKSANRNRYQKHIDEAIGVLQKVLELTFSISHLSVR 2976
            QPRL+GSL+TAM+EFS    G  V+++EL+ VSVT+V NEA+K FCA+FHD      F   IA EIL+AF+ E+  ++ +    NLRDF  F +RI  V+R SVKP+L KL   +GIL+   V E + T+ TA++DQ+G+LANLQ+L++ S D M+++G    SM+++SS N+ I +  +    TL++   K     +    I E + +L+ V  L  ++ H S R
Sbjct:   26 QPRLVGSLVTAMLEFSMKTTGAPVSHIELSNVSVTVVTNEAHKVFCAMFHDTTGRPGFTSFIAKEILDAFIMEYGAELGQVGH-NLRDFHRFHYRILSVIRDSVKPILRKLQLQRGILKAIYVIEDAVTYATADVDQIGVLANLQSLVNSSCDAMSYSGVNVNSMTIQSSRNTCIQVNVVQHSETLIVMYKKGPYAAKNIVAIKECVTMLRNVCALVRNL-HQSTR 249
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.1997.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JVE3_9PHAE1.020e-11686.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUY6_ECTSI1.000e-10190.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YZ72_9STRA1.340e-6151.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9UFX6_9STRA5.990e-5848.44Hypothetical protein n=2 Tax=Pinguiochrysidaceae T... [more]
A0A0P1A6Z4_PLAHL1.800e-4541.07Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A485KWW7_9STRA2.410e-4443.87Aste57867_12638 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S2B5T7_9STRA3.150e-4442.54Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6G0WTP7_9STRA2.220e-4242.48Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
F0WRA1_9STRA1.010e-4141.94Uncharacterized protein AlNc14C210G8908 n=2 Tax=Al... [more]
K3W537_GLOUD1.370e-4142.48Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:57451..65480 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score318.5
Seed ortholog evalue2.3e-84
Seed eggNOG ortholog2880.D7FUY6
EggNOG OGs2C1KP@1,2RBK8@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_008670.1
Exons7
Model size4823
Cds size645
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815592.3853676-UTR-P-fluviatile_contig14:57450..592941622815592.3853676-UTR-P-fluviatile_contig14:57450..59294Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 57451..59294 -
1693562368.7947638-UTR-P-fluviatile_contig14:57450..592941693562368.7947638-UTR-P-fluviatile_contig14:57450..59294Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 57451..59294 -
1622815592.466317-UTR-P-fluviatile_contig14:63133..647441622815592.466317-UTR-P-fluviatile_contig14:63133..64744Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 63134..64744 -
1693562368.8619723-UTR-P-fluviatile_contig14:63133..647441693562368.8619723-UTR-P-fluviatile_contig14:63133..64744Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 63134..64744 -
1622815592.482028-UTR-P-fluviatile_contig14:64757..654801622815592.482028-UTR-P-fluviatile_contig14:64757..65480Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 64758..65480 -
1693562368.875304-UTR-P-fluviatile_contig14:64757..654801693562368.875304-UTR-P-fluviatile_contig14:64757..65480Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 64758..65480 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815592.3961637-CDS-P-fluviatile_contig14:59294..593381622815592.3961637-CDS-P-fluviatile_contig14:59294..59338Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 59295..59338 -
1693562368.8052273-CDS-P-fluviatile_contig14:59294..593381693562368.8052273-CDS-P-fluviatile_contig14:59294..59338Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 59295..59338 -
1622815592.4111109-CDS-P-fluviatile_contig14:59916..599781622815592.4111109-CDS-P-fluviatile_contig14:59916..59978Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 59917..59978 -
1693562368.812911-CDS-P-fluviatile_contig14:59916..599781693562368.812911-CDS-P-fluviatile_contig14:59916..59978Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 59917..59978 -
1622815592.4227402-CDS-P-fluviatile_contig14:60557..606661622815592.4227402-CDS-P-fluviatile_contig14:60557..60666Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 60558..60666 -
1693562368.8206213-CDS-P-fluviatile_contig14:60557..606661693562368.8206213-CDS-P-fluviatile_contig14:60557..60666Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 60558..60666 -
1622815592.4325147-CDS-P-fluviatile_contig14:61215..613471622815592.4325147-CDS-P-fluviatile_contig14:61215..61347Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 61216..61347 -
1693562368.828618-CDS-P-fluviatile_contig14:61215..613471693562368.828618-CDS-P-fluviatile_contig14:61215..61347Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 61216..61347 -
1622815592.4432583-CDS-P-fluviatile_contig14:62119..622551622815592.4432583-CDS-P-fluviatile_contig14:62119..62255Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 62120..62255 -
1693562368.836888-CDS-P-fluviatile_contig14:62119..622551693562368.836888-CDS-P-fluviatile_contig14:62119..62255Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 62120..62255 -
1622815592.4533706-CDS-P-fluviatile_contig14:62971..631331622815592.4533706-CDS-P-fluviatile_contig14:62971..63133Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 62972..63133 -
1693562368.8455129-CDS-P-fluviatile_contig14:62971..631331693562368.8455129-CDS-P-fluviatile_contig14:62971..63133Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 62972..63133 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.1997.1prot_P-fluviatile_contig14.1997.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 59295..63133 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.1997.1

>prot_P-fluviatile_contig14.1997.1 ID=prot_P-fluviatile_contig14.1997.1|Name=mRNA_P-fluviatile_contig14.1997.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=215bp
MVEFSKVAAGMQVAYVELTGVSVTLVGNEANKTFCALFHDREDGATFGRL
IASEILNAFLEEHARDIKEATSLNLRDFRAFKHRIPGVVRKSVKPVLEKL
VHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAHAGNG
CVSMSLESSSNSRILIWRIDVWTLVIAVHKSANRNRYQKHIDEAIGVLQK
VLELTFSISHLSVR*
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mRNA from alignment at P-fluviatile_contig14:57451..65480-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.1997.1 ID=mRNA_P-fluviatile_contig14.1997.1|Name=mRNA_P-fluviatile_contig14.1997.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8030bp|location=Sequence derived from alignment at P-fluviatile_contig14:57451..65480- (Porterinema fluviatile SAG_2381)
AAATCTTGTGTCAAGAAAAATCCGACACCACATCATCCATCGGCAGATCT
CCCATGACCAATGTCTGCGTATTCCAAGATTCAAGCAGCATGAGAGCAGC
TCAGTGCACCATTGCAAAATAGCGAAGCGAGGAAAACACGGGAACTTCTT
ACGCATTCCCCATCAAAGCCAGCAAAAAGGTACCCCTGCTGTTGTCGGCG
ATCGCCGCTGCCGGGTGTGTGTTCCACGTACCCTAGCTTCTCGCATACAC
GTCACGCACCTAACATATGAAACAATTGCCCGTTTCCTGCGCGCCGCCGC
TGACAGACACGCACATGTGCCTCGATAATTCCTCTCGCTCTACCCCGCTC
TCCGTGGGCTAAACAACTACAGCACGTGACGAGTGGCTACACTCGTGAGC
ACCCTGTACCCGTGGAGTCTCACTAAATCGCTGTCCATCCCTCGCACTGG
CTATGCCTTACTTTTTGTATCGCTTGCTCCGTCTACTCCTGTTTCGCGAG
CCCTCACACAACTAGAAGTTGCCACTTTTTAACCGTCAAAGCCGCATTTC
TGACCACATCAAAGGCAGGCACGCTCGCATTTCGTCCAACGAAGCACGGC
AGTGTCGGAGAGGTTGAAGTAGGCGTTCGTGACGCTTCCCGACTGGCCTG
CATTCTGTCCACCGAACCTGAAGGCGCCAACACCTTCTGCATGAAATGGC
ACCCGTCTTTCGAACTTACTTCTGCCAGAAGTCTAGCGGTGAAGAGCGTG
CGGGAGTTCGAATGTTGTCGTTTGAGTAGGAGACAACGCAAGGGGAGAGC
GATTTTCATGCCTGTGCAGAATTTGTAAGACCTTGTGTCATTGGATTTTA
TGTTGCCGCGATCATGGCGAGTTGACGCCACCAGCCCGCAGTTGACCGGC
CATGATGTCGAGGGTCGAGATGGGCCCGGTCGTCGAATTCGAGGATGAAC
CTCGTTGATAAGAGCCACTTTTTGTGGCTTTATGCTAATGAGCGCAAGAC
CGCAAAATGATAACATTCCGCCCGAACAACCCGGGCGGGGCGGGACATCC
AGCCACTGACCTGGCCTCGAGCAGTCGACAGGGAGGCGGACCCGTGCCCG
CGAGGGGTCCCCGTGGCACGCTGGGCAGGTCTTGGTGTTACAAGCTTTGT
TCTTGGGACGCTACGGCTGTACCAGGGTGATTTCGTGGATGGGCGGTTGT
GCGTCGCACACGTGCTACTGCTCGAGGGCGTATGGGCGTGCGCGAGTCGA
AATCTCGAGCGTTTTCTCCCGACGTTTGCGAGGTAGAAAGGGCAGTAGGG
ACTGGAAAGAGGAAGTGAAAGAGAGAGGGGTGGGGAGGGGGAGTGAATGG
CGGCAGTGATAGCGCTGCTTGCTCGATTCAGTGTGGATGGGTGGACAGCA
AGCAGCTGCTCACAGGGCCGCGGCAGAACGCGCTCCTTTCCCCTCTTGTA
CTGGTGGCCCCGCCGTGCGACTTTGGAAATGGGAAGCCAGAGCTGACATG
CATGCGTGACGGCCTGCCGACAACAAGATCTCCTCGAGGTGGTTTTGGCC
CGCTGCGGTTTGTTGCCAAAAGCAATCGTTCACCGTAAGAAGCTTTCACG
ATGGTGACTGCTAACCAAATTGAAGCGAAACCCCCGGCCGACAAACAGAG
TAAAAGTCGCCGAAAAGTCACATGGAAATACACAAGGACAGCGCGGGAGG
CAGGTGGAGAGGCCAGAAGGGCAAACTATTCGGCAAGAATCATTTTTCGC
AAGAAAGGCCACTGAACACAGCGCGAAGCAGCCTGACGCACCCAGCAGTC
AGGGAGGGGTGGGAGGGTACCAGCGGTCGGGACGGGCCCCAAAGCGAGGG
CAAATTCTCAGCCGAAATACCCGGGGCAAGACTGGCAGAGAGTCGAACGA
CGCGACGGGCGGGCCACGCAGGCATTGTGCGGTGCCCCCACCCGTACGTG
TGTGTGCGTGTCGTTCGGCGTGTGTGAGCTCCGTCCAAGACGATTGGTTG
CCTTCCCGCCGCCCACGTGGTCGGCCCCCCAGCACCGCGCAAGACGCGCG
CGCGCATGAGCGGCGTCACGCCCCTCCCGATACATTTCTGCTTGTGCTCG
GTCTTGCTTGTTACGCTCTCACGGAGGCGATTCCAGCTCTTTAACGTGTT
TGTTTGAGCTATTTGGTTTCCGTTCAAACCGACCGGCTCTGCTGACAATG
TGACCCAACTCAGCCAAAAATCCCCAGCTCCCCAGCCCCACGCCACCCCT
GGTTTTCCTCGATGTTGCTTGTCACAAAAAAAACACATGACAATCAAACG
GACCGCGGTATACGCAGCCGAGGCTGCTGGGCTCTCTCCTGACGGCGATG
GTGGAGTTCTCGAAGGTCGCGGCGGGAATGCAGGTGGCGTACGTGGAGCT
TACAGGGGTGTCGGTGACCCTTGTAGGCAACGAGGCGAACAAGACATTCT
GCGCACTGTTCCACGACAGAGAAGATGGGGCAACGTTCGGGCGGCTTATC
GCATCAGAGGTTTGTTTTATGTGCGGTTTGTTTTATGTGCGAGCACTGGC
ATGAAATGAGAAAGTGGATTGCTTTCATGTCTTGCCCCTTTCTCCGGCCT
CTTTCGTCGTCGTCCTCTACTCCTTTTTGTTTGGTTCCGGTTCGGCGGAA
TGCTGAGCCATTGCGTGTGAAAACAACATTCTTCTCGTTCGCTAGCTTGT
GGAATAAGCGAAGTCTTCACCCCATCAGAGGATGTGAGAATATACCGCCC
CCCCCTCCGCTCCGTTTCAATTGATTTCCCCAGGTCAGCTCAAGTGTGTC
CTCTTTCTGTACAACGTGTTGCGTTCCGAGAAGGGGATCGTCAAGACACG
AAACGATATTTATTCAACAACGCCAACATCGGTCGCTGAATCAGAGGGGG
CTCATGGGCGGAATAGAACCCCGTACCCCTCCACCCCCCTTCCATTCCTT
GCCCTCATGTACCGAAGTTCGCCGCGTACAACCTTTTTTGAAATTCAGGA
AGAGGAGTGGAATTTCGCGCTGTACGCGCTTTCTAGTTTGCTTCTCTCTC
CCATCTTCATTCGCATCTCATACAGCACCATCGCACCTCACCTCACCTCA
CCTCGTTACAGTTCAGTTCACCGTTGTTACCAAAACCGCGCGGCGAACCC
GCGAAGCGAACCAAAGTACTAATGAATCATTTATTTCGGATGAACTGGTC
GATGTCGGATGAACGATGCCATCAGATTTTGAATGCCTTCTTGGAGGAGC
ACGCGAGAGACATCAAAGAGGCGACCAGCCTCAACCTCAGAGACTTCAGA
GCCTTCAAGCACCGGATACCGGGGGTCGTGCGGAAATCAGTGAAACCGGT
GCTCGAAAAACGTGAGATTCAAGAGATACAGCGCGGACAGACGGGTGGGA
GAAAGTGGAGGTGGGAGGGAGGGAGGGAGGGAAGGGAGGGAGTGAGGAAG
GTAAGCTGATAGAGAGAGCGAGAGGGCAAGAGGTTGCCCATGGTAGTGGA
TGGTGCAACAGCTCTAGCAAGGTTAGGTAAGAAAGAAGGCAGGGAAAGAG
GCACCATGCGGCAGGCCATTAGTCACCAACAACGAGGGCGTTACAAAAAG
GCATCGTATCACGGAACAGTATGCCAATATCGCAGGACGACACTTTTCCG
TTATTTGTTCCGTCTTTCCACCATCTTGAATACCGGTCGAAGCATAAGCC
GTGTCGCGTAAAGATAGACTCCTGTGAGTCCCACCGCACCCTTCTAATCC
CATCCGTCCCATGCCGTCCCGTCCCATCCTCAACACGACAATGAAGGCGT
ACCTATAGCGTGTCAATTTATGCCTCTCGCGCGGGGAGGTGGGAATGGGA
CCTGGTGCCACCGTTGTGTTGTCCGCACCAGTTGTGAGATCACCGGCGGC
ATTTGTCAGCTAAAAGGGGCAGATCTCATCCCATCCCAAAAGAAATTTGT
GCTGAGAGCTCTCATCACGTGATTGCCCTGTTTTCTTTAAGTGGTGTTGG
TGGTTGTCCTGTCCCGGATGTAGGCTGGACTCCAACCGTGTTTCCCGGTT
TTTTCAGGGCCGCGCTGATCTGTTGCTCGTCTTTTTGCTTCCTTGCCTGT
CTTTCCCATTTGTCTTGCGGACTCCCCGATCAGTTGTGCATGTCAAGGGA
ATCTTGAGATGTGCGCTGGTGACGGAGACCTCGGAGACGTTTCAGACGGC
TGAGATTGACCAGTTGGGTTTGCTGGCCAACCTGCAGGCGCTCATCAGTC
TGTCGACGGACATCAGTGAGTTTGTTCGGTTCGCCGCGTTTCGTTTGGAT
TATTCTTGGTAGAATCTGGTTTGTGTGTTGTCCTGTACGAGGCAATGTTT
TTTGTGTGATTTCACTCCACGTGCTCGCCGCTTATTCCTTGCATTGTATG
TATTGCATTTGAAGCAAAGTGAGATAACAACGAGAAGGATGGTATGTTGT
ATGGTGGACTCGGCGGTTCTTCTACTCGTGATCCTGGTGCAGTTTGCACA
CACTGCACCGCAGGTTTGTCGGGCAGATTGTCAACACAAATATGCAGACA
GGAACCTGGCGCCTTCAAGCAGTCCTCGCACCTCTTTACAACAGTGTGTT
TCCCTGCCCAAATTATTTCAAAGGTGCGAAAAAATTGCCTTAGGGAAATC
GTTCACGTGCCATCGTTTGTCAAAACTCGACGAGGATAATGTTACAGACC
AAATTTCTATATCCCCACGCTAGCCCCCAACATTTCATTGGTACCACCCC
ACACAACAACCTACTCTGCCCTCCCGTCGTCGTGCCGCACATCGCCCCCA
CTCGGAATCGCAAGTGGCGCATGCGGGGAACGGGTGCGTGTCGATGTCGC
TGGAGAGCAGCAGCAACTCTAGGATTCTGATTTGGAGGATAGACGTGTGG
ACGCTAGTCATCGCCGTACACAAGTGAGTTTCCGCGCCGCACGTCGAGCG
AATGATGGAATGAGGCTTGTGTGCTCCTTATCATGAACTCCGCCGGCGGG
TAATCCCCGTCTCAACCAAGCACCGTTCCTCCTCTTCGCGGAATTGACAT
CTACGATTATTTGCTCCCACGTTTCGATATCTTATTCGTAATGTATACCA
GTCTTTCGCAGGGGGGAAGGTAGCCAACAACTCCCAATTAATATGTGCGC
GAGTGTACTACAGGGTTCCTTGCAGAGCGTACCTGCCTGCCTCCCTGCCA
GCCTAGAATCTAAAAGCGAAACTTGTGCGTCGTAGCATGTTTGGTGCAGC
TGCTGGGTCGGAGACGTCAGTCTCAACTTTGAACCTCCTAGTCGGTTGCT
TCACGTGCGACCTGTTGATCTGAACATCCCGCAGCGGAAACCAGAACATA
CCGAATTTGTCACGCGTACTCACGCCCTGCGCTCGCTTCCCGGTTTTTGA
GGAATCTGCGCGTTTGATTAGCCTCTGCAGTCAGTGCCTCGCGAACTCAG
CGCTTGTTGGACCTTTGCTCGCCTCATCCTCGCCCGCCCCCACCTTCACC
AGATCGGCAAATCGCAACCGATACCAGAAGCATATAGACGAAGCTATAGG
GGTCCTCCAAAAAGGTAAAACAATCGGGTTTGGAAGGATGCGCCTTTGAG
GAGTGTGAGGTAGTCCGCCGCTTCTTTTGTGCATCGCAGAAACAACAGTG
CGAGACGTTTGGAGGCAAAGAACTGTTGCCCTGCCACTCGACCAATGGCT
GAAAATGTAGAAATTTGCTACACAAAGCGGCGATGGTACGGCACTGGCTG
GGTGTACTCGTGCACCTTTGGCAAGAGGAGAGAGGGGTGAGAGAATAGAG
ACTGGGGTCCTGGGTTGTGTGAGAATCACCATGTACGTCCAAGATCGTCT
AGATGCGCGTGCGACTGAGTTATACTTGAGAGCACCACAGCACTCACCGG
AATTGTGAGTCACGCATTGGTCTGATGGTATTCGTCCCCCTGCATCCCTT
GATACCCTTCCGTGCATACGAAGTACAAAGACATCAACCCAGAGAAAGCA
CCCCCCCCTGTTTTCCCCTCTCTTTGGACGGCAACGCTCGTGTTAACCTC
GCTCGCTTTTGTCACGCATCACCTCCTTCCCCCCCTTCCTACCTTCCCCC
CCGTCGGACTCATTTCTTTTCGCATCTTATTTTTTTTCGCAGTGTTGGAG
TTAACATTCAGCATCAGCCACTTATCGGTGCGATGACACAGCATCACGTC
GGCTGTGGGTGTGCGGGTGGGGGTCTGCCCTTGGTCCTGTCCTTCGTCGT
TGTCGTTGTTGTTGAATATGATGTTGCTGCTGCTGCTGCTGTTGCCATCA
TTTTAAGCACAAAAATATCACCACGGCATTGCTGCCTCTAAGACATTTTT
CGCGTCACAAGCATCACCAGTGCAGTGTCTTGCGTCCTCAAGAGTGCGGG
TCGTCTGGGTGGGTTGATGCGCTGGAGGGGAATGGGTCGGCAGCCGAAAG
GCGCAGGTGGCAGGCCAAACAGGCAGCTGCGTATCTGATTTTTTCCGATT
GGTTTTGGATGCGACGAGGAGAAACATGAAGCGGAAGGAAAGGGTGAAGG
CAGGACGGAAGGGTGAAGGAAGCAAGACAGGAACGAATGACCATGGCAGA
AGCGCGGCTATTGGCGGGAGCGGGATGGCAGAGGAAGATGCTGGCGGTGG
GAGCGCTCTTTTGCCGCAGTTGTTGCCGACGGCGGTGCTAGTGCTTTTGA
AGCTGGCGCAGAAGAAGGCAACGGCGTAATCCGCAGCATTTGCCGGTAGG
ATTCTTGTCGGTCGTGATCATGTTTCATATGGGTGGCGGGCTGGGTGGCT
AGGCAGCCCGCCGGTCAAGGGAGCTGAGCTCCACCCATCTGTCGCCCCAG
GTGCACATATCGGTAAACGGAAGCGGGACGCTTTGCCTTCACGGGTCGAC
GATGAGCCCAGGTTCGGAGGGATCGGCGGAACGCGAGGAATCTACCTGAG
TGTAGGCCATGCTGATCAGTTGATGCACGAAGGCCCCGGTGGGGACCGAC
AGTGCTGTGCGTTTTTTTACGCCCATGCCATGTTTTTTACTTTTGAGGGG
CGTGAGGCGCGAGGTGCATATTTTTAGAGACAGCGTCGTTGTTGACTCTT
TATTTTTCATGCCCCTATGTGTCGCTTGGCACACGCCTCCACCCCTGCCT
TCGTTCAGCGACTTTTCCCTAAAATTTGGCTCAAGTGTTAGGCCTGTTCC
ATCATAAGTGATATTCAAGGCGTCGGTGCCTTGTGTGTGTGTTACGGAAA
AACCGATGTGTTGGGTAGTAATGGGTTGTATCGCCGGCGACACCTCAAGC
GCTCCGATGAGTGAAATCGCCTGCGGTACGGGTCTAACCAGCCCTTTCGC
TGCTTGAGAACATTGCAGTTGGTATCGAAGACCTCCCAACCCTCTCCTCA
ACCGTATGGGATTTATACCAGCTAGCTTTGGCTGTGTTTGGCTTGAACAC
GGGGGATCCGGCGTTCGGAGGCGAGAACGGGGCGGGTCTGAGATTCTTCT
CAGGTGAAAAATCTGGAAGTTTGTACTGTTATTCAGGACAGGCATGCTCA
CCGCCACGGCAGGGTGGTTGTCCGCCTGAATTGATTTTAGTCGTTATGCA
CTTTCTCAACCACTTATGTTGGCAGTAAAGGTGTGTCCTCGTGGCGCAAG
AGACTTCCCTTAATCCACGGAAAGGTGCGCATCTTTCGTGCGTGGTATGC
ATGGGCTTTGCAGTATTTTGATTTTCAGATCTCGTTAAAGTTTGTTTTAT
AACTGTCCGTGTAGTACGAGCTGCTGTTGGTGTCGTTCGTGTAGTGTAGT
CGACGTTCTGTATGTGAGAGCCTCAAAGTACATCAAACCATTACGCTCGT
TCTCGATACCAGAATCGTTATGGGAAGGCAGAGGAGCTCGAGGGGTCGGG
GACAACGGCGCACGCGGTGTCTTGCGAAAGGGTACAAGTTCGCAGCAAAG
TATCCTCTGTTCTGACGACTTTGGTCTCCGGGCATATCAACATGCAGTTT
CGTGAAGCACGCAGCTGCAACAGGACAGTG
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Coding sequence (CDS) from alignment at P-fluviatile_contig14:57451..65480-

>mRNA_P-fluviatile_contig14.1997.1 ID=mRNA_P-fluviatile_contig14.1997.1|Name=mRNA_P-fluviatile_contig14.1997.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1290bp|location=Sequence derived from alignment at P-fluviatile_contig14:57451..65480- (Porterinema fluviatile SAG_2381)
ATGGTGGAGTTCTCGAAGGTCGCGGCGGGAATGCAGGTGGCGTACGTGGA
GCTTACAGGGGTGTCGGTGACCCTTGTAGGCAACGAGGCGAACAAGACAT
TCTGCGCACTGTTCCACGACAGAGAAGATGGGGCAACGTTCGGGCGGCTT
ATCGCATCAGAGATGGTGGAGTTCTCGAAGGTCGCGGCGGGAATGCAGGT
GGCGTACGTGGAGCTTACAGGGGTGTCGGTGACCCTTGTAGGCAACGAGG
CGAACAAGACATTCTGCGCACTGTTCCACGACAGAGAAGATGGGGCAACG
TTCGGGCGGCTTATCGCATCAGAGATTTTGAATGCCTTCTTGGAGGAGCA
CGCGAGAGACATCAAAGAGGCGACCAGCCTCAACCTCAGAGACTTCAGAG
CCTTCAAGCACCGGATACCGGGGGTCGTGCGGAAATCAGTGAAACCGGTG
CTCGAAAAACATTTTGAATGCCTTCTTGGAGGAGCACGCGAGAGACATCA
AAGAGGCGACCAGCCTCAACCTCAGAGACTTCAGAGCCTTCAAGCACCGG
ATACCGGGGGTCGTGCGGAAATCAGTGAAACCGGTGCTCGAAAAACTTGT
GCATGTCAAGGGAATCTTGAGATGTGCGCTGGTGACGGAGACCTCGGAGA
CGTTTCAGACGGCTGAGATTGACCAGTTGGGTTTGCTGGCCAACCTGCAG
GCGCTCATCAGTCTGTCGACGGACATCATTGTGCATGTCAAGGGAATCTT
GAGATGTGCGCTGGTGACGGAGACCTCGGAGACGTTTCAGACGGCTGAGA
TTGACCAGTTGGGTTTGCTGGCCAACCTGCAGGCGCTCATCAGTCTGTCG
ACGGACATCATGGCGCATGCGGGGAACGGGTGCGTGTCGATGTCGCTGGA
GAGCAGCAGCAACTCTAGGATTCTGATTTGGAGGATAGACGTGTGGACGC
TAGTCATCGCCGTACACAATGGCGCATGCGGGGAACGGGTGCGTGTCGAT
GTCGCTGGAGAGCAGCAGCAACTCTAGGATTCTGATTTGGAGGATAGACG
TGTGGACGCTAGTCATCGCCGTACACAAATCGGCAAATCGCAACCGATAC
CAGAAGCATATAGACGAAGCTATAGGGGTCCTCCAAAAAGATCGGCAAAT
CGCAACCGATACCAGAAGCATATAGACGAAGCTATAGGGGTCCTCCAAAA
AGTGTTGGAGTTAACATTCAGCATCAGCCACTTATCGGTGCGATGATGTT
GGAGTTAACATTCAGCATCAGCCACTTATCGGTGCGATGA
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