mRNA_P-fluviatile_contig14.1994.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig14.1994.1
Unique NamemRNA_P-fluviatile_contig14.1994.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig14.1994.1 vs. uniprot
Match: D7G0J2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J2_ECTSI)

HSP 1 Score: 374 bits (960), Expect = 3.950e-115
Identity = 219/443 (49.44%), Postives = 282/443 (63.66%), Query Frame = 3 
Query: 1281 HLDVMVGARSLQALTASLLRRRL-KDQVRSCNWETNLTDEQIKYAGLDAHAGVLLFYHVHQRMDPIFTEPRPDVDSLPVDTCLRLDTSTNTLCVAEGSLVDYGKR-TWGDTRLVVGRREGRATRMVVRLTKKYIPRALTLHPREDGVEPQALDQLELPTV---------RPAEAERQPESGAAATDGASALTSPTSKLAGGGGRAISSVRGGTSGADGNASKANGEYRPFCGSLRDALAIPDPEVMARVRAVVQKRRPSQGEKELIAFMGGNFSNLILKHVPRVVPPPDVVVPRFENVIDTFKEVRDGATGETLFKKTLIKAADNALEHLKKGCVSYPDPTKVQLFQLSGRTKDGLDKVRSARGTNRNEGYHQGLLRRLGAFNSSPHMARNTLLPHKYRRNHRMAVLHRGMPSELQGFYNH-VVEDIQAVTRGWYDDEPLYPG 2573
            HL V  GARSLQALTA LL RRL KD VR+ NWET LT +Q KYAGLD++AGVLLFY +  RMDPI TE RPDV SLP +T LRL TSTNT CVAEG++ +Y +  TWG T L +G   G ATRMVVRLT K++P A  LHP E G + QALD+LEL  +          P +A+      A  T  +SA T    +  GG     S+   G +G                              M  VR+V + R PS  ++E+ + M   +++ +LKHVPR+VP PD+++PRF+N+++TFK VRD  TGETLF   + KA      H++KGC+  P+P  V LF+++GRTKDGL+ +RS +GTNR E +HQ L   +G++++S  MA  T+L H YRRNHRMA LHRGM  +L G+Y+H  VEDIQA+T+GWYDDEPLYPG
Sbjct:  213 HLHVKNGARSLQALTAELLHRRLAKDAVRTSNWETTLTKDQEKYAGLDSYAGVLLFYRIWARMDPILTECRPDVLSLPANTHLRLYTSTNTRCVAEGTVEEYSQDGTWGSTGLTIGHVTGGATRMVVRLTVKHVPGAFVLHPGEGGGQVQALDELELGALVLWDAINSRLPTDADIVGGGNAGTTATSSASTPGLEEQVGG-----SASSSGVAGCGXXXXXXXXXXXXXXXXXXXXXXXXPSSAMDDVRSVWKLRNPSWNDQEIASDMRAKYASHLLKHVPRIVPSPDILLPRFDNLVETFKNVRD-VTGETLFTDRMHKATKLLRTHIEKGCLHDPNPDLVTLFEITGRTKDGLNLIRSIKGTNRIENFHQLLRLLMGSYHASALMAHFTMLLHNYRRNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDDEPLYPG 649
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BLAST of mRNA_P-fluviatile_contig14.1994.1 vs. uniprot
Match: A0A6H5KSD7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSD7_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 1.100e-52
Identity = 107/165 (64.85%), Postives = 128/165 (77.58%), Query Frame = 3 
Query: 1263 WPASRQHLDVMVGARSLQALTASLLRRRL-KDQVRSCNWETNLTDEQIKYAGLDAHAGVLLFYHVHQRMDPIFTEPRPDVDSLPVDTCLRLDTSTNTLCVAEGSLVDYGKRTWGDTRLVVGRREGRATRMVVRLTKKYIPRALTLHPREDGVEPQALDQLELPTV 1754
            W A++   D+     +  ALTA LLRRRL K QVR+ NWET+LT EQI YAGLD++AGVLL+YHV+ RMDP++TEPRPDV SLP DT LRL T TNT CV EG+L  YG++TWG+T L +GRREG  TRMVVRLTKKYIP AL L+P  DG EPQAL++LEL T+
Sbjct:  409 WLATQTRPDI-----ANAALTAGLLRRRLPKGQVRTSNWETSLTKEQITYAGLDSYAGVLLYYHVYSRMDPVYTEPRPDVLSLPADTTLRLYTVTNTRCVGEGTLAGYGEQTWGNTGLAIGRREGGTTRMVVRLTKKYIPGALALYPCHDGGEPQALEELELGTL 568
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BLAST of mRNA_P-fluviatile_contig14.1994.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 2.310e-23
Identity = 79/232 (34.05%), Postives = 122/232 (52.59%), Query Frame = 3 
Query: 1911 KANGEYRPFCGSLRDA--LAIPDPEVMARVRAV-------VQKRRPSQGEK--ELIAFMGGNFSNLILKHVPRVVPPPDVVVPRFENVIDTFKEVRDGATGETLFKKTLIKAADNALEHLKKGCVSYPDPTKVQLFQLSGRTKDGLDKVRSARGTNRNEGYHQGLLRRLGAFNSSPHMARNTLLPHKYRRNHRMAVLHRGMPSELQGFYN-HVVEDIQAVTRGWYDDEPLYP 2570
            K++G ++PF   LRDA  L   D    A ++         V+    ++G K  E+      N+S   L+   R+VP  DV++ RF+ VI+ F    D  +GE L +   +KA     +H++  C+S  DP  + ++   G+ K GL   R  RGTN  EGYH+ L   L ++ +SP +A++ LL   YR N RM + +RG+P+ L G YN ++VE IQ  T  W    P++P
Sbjct:  505 KSHGAFKPFMARLRDACFLVNRDDVYQASLKPFGWIWERSVEMTLEARGMKPEEVQQLTEQNWS-FFLRSSRRLVPRRDVLLKRFDRVIEEFGGCVDNTSGEVLLRPKAMKAVRQLRKHIENDCLS--DPDGMAMYFAIGKNKHGLTDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGGHYNQYLVESIQRDTADWDSSHPVFP 733
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BLAST of mRNA_P-fluviatile_contig14.1994.1 vs. uniprot
Match: A0A5C3NET4_9AGAM (3'-5' exonuclease domain-containing protein n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3NET4_9AGAM)

HSP 1 Score: 105 bits (261), Expect = 3.270e-19
Identity = 62/187 (33.16%), Postives = 101/187 (54.01%), Query Frame = 3 
Query: 1917 NGEYRPFCGSLRDALAIPDPEVMARVRAVVQKRRPSQGEKELIAFMGGNFSNLILKHVPRVVPPPDVVVPRFENVIDTFKEVRDGATGETLFKKTLIKAADNALEHLKKGCVSYPDPTKVQLFQLSGRTKDGLDKVRSARGTNRNEG-YHQGLLRRLGAFNSSPHMARNTLLPHKYRRNHRMAVLHR 2474
            +G  RPF  +LRDAL IPDP+    +   +++R+ +     L           + + V R+VPPP++++PR  +V+  F  ++D  TG+ LF         N LE++++G   Y DP  +QL+   G+ K GL + +  RGTN  EG  HQ ++R  G+FN++P  A   L  ++   N R+  L+R
Sbjct: 1082 HGLRRPFARALRDALFIPDPDDKVIIERFLEERQTTWDAMLLY------HPCWLFRRVKRIVPPPEILLPRVRDVLQKFGPLKDSTTGQPLFNDKAWDICTNVLENIRRGY--YSDPPGIQLYFTRGQDKYGLMQYKCCRGTNAVEGGVHQNVIRWFGSFNAAPEFALQLLRDYRLYHNLRVGTLNR 1260
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BLAST of mRNA_P-fluviatile_contig14.1994.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 3.040e-8
Identity = 57/145 (39.31%), Postives = 79/145 (54.48%), Query Frame = 3 
Query: 1305 RSLQALTASLLRRRL-KDQ-VRSCNW-ETNLTDEQIKYAGLDAHAGVLLFYHVHQRMDPIFTEPRPDVDSLPVDTCLRLDTSTNTLCVAEGSLVDYGKRTWGDTRL-VVGRREGR--ATRMVVRLTKKYIPRALTLHPREDGVEP 1721
            R L  L   LL ++L KD  VR   W + +L+D+Q +YA LDA+A +LL   + +  D IF     D + L V   +RL T     CV EG +V++   TWG T   +V RR  R  A R  VRL + ++PRA TL+P  D  +P
Sbjct:  355 RGLADLCVHLLGQQLPKDPTVRLSKWNKLDLSDDQKRYAALDAYACLLLHGRIGELSDSIFR----DAEELHVGDRVRLYTRAGNDCVGEGCIVEHTDETWGTTGFYLVPRRATRRFARRWAVRLDRVHVPRAKTLYP--DATDP 493
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BLAST of mRNA_P-fluviatile_contig14.1994.1 vs. uniprot
Match: A0A4Q2D1K9_9AGAR (3'-5' exonuclease domain-containing protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2D1K9_9AGAR)

HSP 1 Score: 68.6 bits (166), Expect = 5.150e-8
Identity = 50/153 (32.68%), Postives = 70/153 (45.75%), Query Frame = 3 
Query: 1902 NASKANGEYRPFCGSLRDALAIPDPEVMARVRAVVQKRRPSQGEKELIAFMGGNFSNLILKHVPRVVPPPDVVVPRFENVIDTFKEVRDGATGETLFKKTLIKAADNALEHLKKGCVSYPDPTKVQLFQLSGRTKD-GLDKVRSARGTNRNEG 2357
            N  + +G    F  +LRDA+ IPD +   R+      + P     EL  +     S  + K   R +PPP+++ PR   V+ TF  ++D  TG  LF     K A N L+ + +G  S  DP  V L+   G  K   L   R  RGTN  EG
Sbjct:  801 NVPRRHGCSDAFNQALRDAIFIPDTQDANRIAVWGSSQTPPVTFNELRQWR----STWLWKRCKRFIPPPEILYPRVYKVLKTFGPLKDATTGSPLFDSARWKIAKNVLDLIYRGFAS--DPPGVPLYTTLGLDKKTNLPLYRCFRGTNMTEG 947
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BLAST of mRNA_P-fluviatile_contig14.1994.1 vs. uniprot
Match: A0A0C3C2M4_PILCF (Uncharacterized protein n=1 Tax=Piloderma croceum (strain F 1598) TaxID=765440 RepID=A0A0C3C2M4_PILCF)

HSP 1 Score: 60.8 bits (146), Expect = 1.230e-5
Identity = 50/179 (27.93%), Postives = 81/179 (45.25%), Query Frame = 3 
Query: 1908 SKANGEYRPFCGSLRDALAIPDPEVMARVRAVVQKRRPSQGEKELIAFMGGNFSNLIL-------KHVPRVVPPPDVVVPRFENVIDTFKEVR---DGATGETLFKKTLIKAADNALEHLKKGCVSYPDPTKVQLFQLSGRTKDGLDKVRSARGTNRNEG-YHQGLLRRLGAFNSSPHM 2411
            SK +  +  F   L   + + D          V  RR  +   E++A  G  +  ++        +HV R+ PPP+++VP+ + +I ++++V+   D + G  LF     KAA+  L   K G +S  DP    L+   G  KDGL      RGTN  EG  H  +    G+  +SP +
Sbjct:  823 SKMHSAFNSFAWELSQVMLVED----------VNDRRAVE---EMLAKKGKTWEQMVYSNPDALHRHVRRLCPPPNILVPQLQALISSWQDVKCSLDPSQG-VLFSAIAHKAAEGLLRVAKLGLIS--DPPGYSLYYKMGVDKDGLSYYCCIRGTNSVEGGIHMPIRHTFGSLRASPEL 985
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig14.1994.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G0J2_ECTSI3.950e-11549.443'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KSD7_9PHAE1.100e-5264.85Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRJ6_9PHAE2.310e-2334.053'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A5C3NET4_9AGAM3.270e-1933.163'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JET4_9PHAE3.040e-839.313'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A4Q2D1K9_9AGAR5.150e-832.683'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A0C3C2M4_PILCF1.230e-527.93Uncharacterized protein n=1 Tax=Piloderma croceum ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig14contigP-fluviatile_contig14:39919..44963 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score374.4
Seed ortholog evalue7.1e-101
Seed eggNOG ortholog2880.D7G0J2
Preferred nameWRN
KEGG koko:K10900,ko:K20777
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Hectar predicted targeting categorymitochondrion
Exons10
Model size2573
Cds size1281
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815592.0382986-CDS-P-fluviatile_contig14:39918..400281622815592.0382986-CDS-P-fluviatile_contig14:39918..40028Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 39919..40028 -
1693562368.566853-CDS-P-fluviatile_contig14:39918..400281693562368.566853-CDS-P-fluviatile_contig14:39918..40028Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 39919..40028 -
1622815592.0512414-CDS-P-fluviatile_contig14:40179..404641622815592.0512414-CDS-P-fluviatile_contig14:40179..40464Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 40180..40464 -
1693562368.5801678-CDS-P-fluviatile_contig14:40179..404641693562368.5801678-CDS-P-fluviatile_contig14:40179..40464Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 40180..40464 -
1622815592.0657272-CDS-P-fluviatile_contig14:40678..409551622815592.0657272-CDS-P-fluviatile_contig14:40678..40955Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 40679..40955 -
1693562368.5899658-CDS-P-fluviatile_contig14:40678..409551693562368.5899658-CDS-P-fluviatile_contig14:40678..40955Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 40679..40955 -
1622815592.080121-CDS-P-fluviatile_contig14:41039..412011622815592.080121-CDS-P-fluviatile_contig14:41039..41201Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 41040..41201 -
1693562368.6019912-CDS-P-fluviatile_contig14:41039..412011693562368.6019912-CDS-P-fluviatile_contig14:41039..41201Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 41040..41201 -
1622815592.094129-CDS-P-fluviatile_contig14:41793..421321622815592.094129-CDS-P-fluviatile_contig14:41793..42132Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 41794..42132 -
1693562368.611315-CDS-P-fluviatile_contig14:41793..421321693562368.611315-CDS-P-fluviatile_contig14:41793..42132Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 41794..42132 -
1622815592.10573-CDS-P-fluviatile_contig14:42307..424151622815592.10573-CDS-P-fluviatile_contig14:42307..42415Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 42308..42415 -
1693562368.622444-CDS-P-fluviatile_contig14:42307..424151693562368.622444-CDS-P-fluviatile_contig14:42307..42415Porterinema fluviatile SAG_2381CDSP-fluviatile_contig14 42308..42415 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815592.1181107-UTR-P-fluviatile_contig14:42415..425221622815592.1181107-UTR-P-fluviatile_contig14:42415..42522Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 42416..42522 -
1693562368.6370919-UTR-P-fluviatile_contig14:42415..425221693562368.6370919-UTR-P-fluviatile_contig14:42415..42522Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 42416..42522 -
1622815592.1373303-UTR-P-fluviatile_contig14:42662..430911622815592.1373303-UTR-P-fluviatile_contig14:42662..43091Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 42663..43091 -
1693562368.6484277-UTR-P-fluviatile_contig14:42662..430911693562368.6484277-UTR-P-fluviatile_contig14:42662..43091Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 42663..43091 -
1622815592.1520157-UTR-P-fluviatile_contig14:43505..438451622815592.1520157-UTR-P-fluviatile_contig14:43505..43845Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 43506..43845 -
1693562368.657464-UTR-P-fluviatile_contig14:43505..438451693562368.657464-UTR-P-fluviatile_contig14:43505..43845Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 43506..43845 -
1622815592.1651466-UTR-P-fluviatile_contig14:44067..444021622815592.1651466-UTR-P-fluviatile_contig14:44067..44402Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 44068..44402 -
1693562368.668452-UTR-P-fluviatile_contig14:44067..444021693562368.668452-UTR-P-fluviatile_contig14:44067..44402Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 44068..44402 -
1622815592.183986-UTR-P-fluviatile_contig14:44882..449631622815592.183986-UTR-P-fluviatile_contig14:44882..44963Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 44883..44963 -
1693562368.6785874-UTR-P-fluviatile_contig14:44882..449631693562368.6785874-UTR-P-fluviatile_contig14:44882..44963Porterinema fluviatile SAG_2381UTRP-fluviatile_contig14 44883..44963 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig14.1994.1prot_P-fluviatile_contig14.1994.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig14 39919..42415 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig14.1994.1

>prot_P-fluviatile_contig14.1994.1 ID=prot_P-fluviatile_contig14.1994.1|Name=mRNA_P-fluviatile_contig14.1994.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=427bp
MVGARSLQALTASLLRRRLKDQVRSCNWETNLTDEQIKYAGLDAHAGVLL
FYHVHQRMDPIFTEPRPDVDSLPVDTCLRLDTSTNTLCVAEGSLVDYGKR
TWGDTRLVVGRREGRATRMVVRLTKKYIPRALTLHPREDGVEPQALDQLE
LPTVRPAEAERQPESGAAATDGASALTSPTSKLAGGGGRAISSVRGGTSG
ADGNASKANGEYRPFCGSLRDALAIPDPEVMARVRAVVQKRRPSQGEKEL
IAFMGGNFSNLILKHVPRVVPPPDVVVPRFENVIDTFKEVRDGATGETLF
KKTLIKAADNALEHLKKGCVSYPDPTKVQLFQLSGRTKDGLDKVRSARGT
NRNEGYHQGLLRRLGAFNSSPHMARNTLLPHKYRRNHRMAVLHRGMPSEL
QGFYNHVVEDIQAVTRGWYDDEPLYPG
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mRNA from alignment at P-fluviatile_contig14:39919..44963-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig14.1994.1 ID=mRNA_P-fluviatile_contig14.1994.1|Name=mRNA_P-fluviatile_contig14.1994.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5045bp|location=Sequence derived from alignment at P-fluviatile_contig14:39919..44963- (Porterinema fluviatile SAG_2381)
CACCAGGCAACGGCGCCGGCTTCGTGCGAAGATGCCCAGGATGTCGCACC
AAGCCCTCCCATGGCCAAATTCATCGCGGAGGTGAAGAGGATTGTTGACA
ACATCACATTGGGTCGGCCACGGCTCCCAGAAGCAGGGGATATGAGGGAA
GCTTCCACGCGGTTCACCATGGGTGTACCCAGACGATCCCCTGCTTGCGA
CTGTGCCGGATCTGGACACCCACTACCGCACGCCTGTTTTCATCTGCATG
TGGGAACTGCTCTGCGGCTACATGTAGGCGCCTCCATGCCCACGCTGCGG
AGAATACACACGCGTGATTAGCTTTTCATACCGAGACGAAGCCATAGTTG
TGGGCTTATGGTGGTGTGCTTTCTTCGCTCTGCTGCATCGTGTACGCCGG
TTGCGACAGCATTTTCTCTGCTCCTTGGTGCCCCTTCGTGTGTGTACGTA
CATTGTTCACCCCACGGTTTTTGCCCTTGAGACTGTTGAACTCTTAGTCT
GATGGTGTTCATCAGAAATGCGAAATTCGTGTTTCGCGGACGGCTACCGT
AAACATCGCAGGTGGTTTGTGACGGCTGGGACCCGCAGAGCCGAACCGTA
TACGGAGAGCACTTCAACTACTACCTGATCGGCAAGCAGTACTCGTGCAA
GGCGTGCAAAGCAAAATCCTCTTCGAAGGGTAGACCAAGGGTAGAGCGGG
CAGCCGAGGGGCGGGTAGCAACACCGGCTACGAATTCGCGCCTTGGCATG
CAGGCGTGCTGAAGCTGCTTCCGCGTGACCTGTTGGCGTGGTTCCCTGCT
ATCATCTTACGGAGATCGGCTGTCGACAAAAAGCTCATCACTCGCGTCGA
CCAGACGCTTGTGCGTTCCATGGGCTTGAAGACCCTGGCAGACCACGTAC
GTGCAGGAGAACCACCTGAGGCACTTCATGAACGGGCAGTTCCGGCGAGC
CCCGTACCGTACGTCCGAACTCAAGATACTTTCATTTATGGTAGTTGATC
ATTTGCATTTGCCTCGACGTGTGTTAATGGTATGTCGCAGCCCGCAGAAA
ACTTGTTACCCATGGTTACGCTCCTTTGCTTGTTTTTTTGTTTACCGGCA
CGTACGAAACCGATGCAGATACTACACCCGAATGGATAGGCGGAGAAGGC
ATGGTCAGCCATCAGCAGTGCCGGAAGAAAACGAGCTGATGCGCAACCCC
CCTCGCTTCAGTCGGTTCGATGATAGCGCTGGTTACAATGGCCGTGCACC
CAGCGCTGCTGTTCTTCAGGCAGCTTTTCTCGCCGTGATGGAAGGCATGG
AGCCTTGGTACCATGAGCAGCAGCAGTTGGTTGACGGCAGGAATCTGGGG
TTGGATGACTCGCACAAGATCACCAAGGGAATACGAGTGATGATGAACGC
GAAAGTTTTTCACGGGGTCCACACAGTCCTCAACGAGTGGAGTCAAGTGG
TAATGTAGGTGAGGTGAGGAGGATAGTGCTGTAGTTCGTGGTTGTGCACT
CAATTAGCAGTTTTCCACCCGGGGCGCTGGTTTCCTCTTGAACTTGTACG
TATTCACCGACTCACCCCCCCCTTCCATGCTCCAAATGTTGTACCTTTTG
TTGTCCCCTCTAGCGCCCGAAGAGACAAGTCGGCGTAGGAACTCTAAGCG
AGATAAGCAGAGACTACAAGGCGCTCGCTAATCGGTATCTTACTCAAGTA
TTTCCCCTCATCCAGGTGCGTTGGTCGTGTAATGATTGTTATATGGGTAA
CCCACACGCTTTTTGAGAACTTTGCGTCCTGGATAGTATGTTGTCGCTTC
GACGCCATTTACTGCGCGTCAAACCCTCTACAGCCTGCAGATTAAGCTTT
TACAACTAAAAACTTTGCGCAGGTGTGCTATAGCGACAACTGCTGTGGGG
ACAGGAAGTTCCTTCAAGAGACGCTCGGACCAGCATCTGTGGCTGTCGAC
GATGCCGACCACAGTACGTGCTTTGCTGGCGAACTTGAGGCGCTGCCGCC
TCTCGACTTCCCAGATGGTTTCGGGGTCAACTGCGTGGTCGTGGAGCGTG
AAGATTGCGAGCTCTCTGCCAGGGCTTGTGTGGAGTTACTGCGTCGTGCG
CGTTTTTCCGAGCCGGCAGTGCTCGGGTTCGACATTGAGTGGAGCGTGCC
TCCGTCTGGGCCTCGTCGGCAGGTTGCAACCCTTCAGCTATCAGCACGCG
ACGGCTACACGGTTTCGTTTCACCTCAAGCCTAGTGAGAGAAAGGATGGC
ATCATGTCGGCAGCCCTGAAAGAGCTTTTAGTCAACGACACGGTGAAACT
GGTGCGTCCTTTTTGGTGTACGACATGTAGACGTAGCTGGTGCCCCCCTA
CAAGTACCATAACGCAACAACATGTGTCAGAGAAGCCACGGTCCATTCCG
TCCGCCTTTTTCATCGTTTTTTTTATTCCGCTGCTCCTCAGGCGGGAATC
TCGGTGAGGGCGGATCTCACGAATGTTTTCGACAGCTACGGTGTGCGTGG
TACACAAGAAGTGGATGTTGGCCAGCTAGCCGGCAGCACCTCGATGTCAT
GGTCGGGGCGCGCTCGCTCCAGGCTCTGACGGCGTCGTTGCTTCGGCGAC
GACTCAAGGACCAAGTTCGTTCTTGCAACTGGGAGACTAATCTGACGGAT
GAGCAGGTGAGCCTGTGCTTCGTGCGCACCCTCCCGGCCGTAGTATGCAG
CGAGATTGTTCGACGGCTTGTGGCGTGCCGATGTTCTTCGTTGGCTTTCG
AAAAAAAAAATCCGCCCTACTTTTAGCATAGTGCATTTTTGTCGCACCTC
GCTTCCAAAATGTGATTCGGTGTTGGCGCAGATAAAATACGCTGGGCTTG
ATGCCCACGCCGGAGTCCTCCTGTTTTACCACGTGCACCAGCGGATGGAT
CCCATCTTTACGGAGCCGCGGCCAGATGTGGATTCGCTTCCTGTCGACAC
TTGTCTACGCCTGGACACGTCGACCAACACCCTTTGCGTGGCAGAGGGTA
GCCTTGTGGACTATGGGAAGCGTACGTGGGGGGACACGAGATTGGTGGTC
GGGCGCAGGGAGGGGAGGGCTACACGTATGGTGGTGCGGCTGACCAAGAA
GTACATCCCCAGGGCGCTGACGCTACACCCCCGAGAAGATGGTGTCGAAC
CCCAGGCGCTCGATCAACTTGTGTTAGATATACGACATATCCACTGAGCT
AAACAGTCAGCGTTAACAAAAGTACAACCAGGGTTCGATTCCCTCTGGGA
CCATCTTGACGCCTTTTTTCTGAAAGACGGGAAAAGTCTGGGATACACAC
CTGAAAGTCATGGTACACATCACCAGTCGTCAACGATGAAGACACATATT
CCCGCCTGTAAGCCGGTCGCACACAGCTTGGGGCAGCGCTGATTACAGGG
ATTACAACCCTGGGGGAAAACCAGAGTCCAACAGTCTAACAGCTGTTCGG
ATCCTGATTGTACTTTTGTTAGATATACAACATATCCACTGAGCTAAACA
GTCAGCGCTGACTGTTTAGCTCAGTGGATATGTTGTATATCTAACAACTT
GAACTTGGGACCCTCGTCTTGTGGGATGCGGTAAGTTGAGAATGGTGTGT
GCGTAGTACTGTTATTGGATCACTTGCAGGTGGATGCGCTTTTGTTTTCA
GTGTTTACCCCTGCCGTTGTAAACAGTGGATTTTGCCGTGCTCTCTGACT
TGCATCTCGTGCGGTGTGCTTGCTTCATCCCCGCAGGTGAGGTGAGCTCG
CGACTACCGAAGGAACTGCCGACTGTTAGGCCTGCGGAGGCAGAGCGGCA
ACCGGAATCGGGCGCCGCGGCCACGGATGGGGCTTCTGCCCTCACCTCAC
CCACTTCCAAGCTCGCGGGGGGAGGGGGGAGGGCGATTTCGTCTGTGAGA
GGGGGGACTTCGGGTGCTGATGGTGTCATCGAGGACAGTTCCTCCGGCGA
GGTACCCAAGCCCCTGGTCAAGCAAGACTTGTTCCACATTGAGGACCGCG
TGCTGAAGAACGCGTCGAAGGCGAACGGGGAATACCGCCCTTTCTGCGGT
TCTCTGAGGGATGCCTTGGCGATACCGGATCCTGAAGTCATGGCTCGCGT
GAGGGCGGTGGTGCAGAAGCGACGCCCTTCGCAGGGCGAAAAGGAGCTCA
TCGCCTTCATGGGAGGGAACTTCTCGAACCTCATCTTGAAGCATGTCCCA
CGAGTAGTGCCTCCTCCAGACGTCGTTGTTCCGCGATTCGAGAACGTCAT
CGACACTTTCAAGGAGGTTCGGGACGGGGCTACAGGTACGATTGGTCATT
CTGAGATTTTTTTAATGAAGTTCCCGGGGAAATATATGAACGGAGCCCAA
CTGTTTACCCGGCATGAAACGATTGTGCTTCGATGTTTTTTGCATCATCG
CTGTGCTATTTTTATCAGGAGAATCGATGATGATGAAGAAATTGTTGATC
ATTTCGAGACATTTTTTGTTTGCGCCACTGCTGTGTTGTTTTTGTTCAGG
AGAAACGTTGTTCAAGAAAACGTTGATCAAGGCCGCAGATAACGCCCTCG
AGCACCTGAAGAAGGGTTGTGTGAGTTATCCGGATCCCACCAAAGTTCAA
CTGTTCCAACTCTCAGGGCGCACGAAAGACGGGCTCGACAAGGTCCGATC
GGCGCGGGGCACCAACCGGAACGAGGGCTATCACCAAGGCCTGCTCCGAC
GGCTAGGGGCCTTCAACTCCTCTCCACACATGGCGCGCAACACCCTGCTC
CCTCACAAATACAGGCGGAACCATCGCATGGCAGGTACATTCAGTTCTCG
TGGATTCGATCAATGTGTCCACCTTGACGTGCAGTGTCAGCAATCAGGCC
CACTCAGAAGAGGAGGACAATGTAGGGCGGATCTTGTTGACAATATTTTC
CGGTTCGCCTGATTTGCTTCCCCTTGATAATCCAGTTCTTCACCGAGGCA
TGCCCTCCGAGCTCCAAGGCTTCTACAACCACGTGGTCGAGGACATCCAG
GCCGTCACGCGCGGGTGGTACGACGACGAGCCTCTCTACCCTGGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig14:39919..44963-

>mRNA_P-fluviatile_contig14.1994.1 ID=mRNA_P-fluviatile_contig14.1994.1|Name=mRNA_P-fluviatile_contig14.1994.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2562bp|location=Sequence derived from alignment at P-fluviatile_contig14:39919..44963- (Porterinema fluviatile SAG_2381)
ATGGTCGGGGCGCGCTCGCTCCAGGCTCTGACGGCGTCGTTGCTTCGGCG
ACGACTCAAGGACCAAGTTCGTTCTTGCAACTGGGAGACTAATCTGACGG
ATGAGCAGATGGTCGGGGCGCGCTCGCTCCAGGCTCTGACGGCGTCGTTG
CTTCGGCGACGACTCAAGGACCAAGTTCGTTCTTGCAACTGGGAGACTAA
TCTGACGGATGAGCAGATAAAATACGCTGGGCTTGATGCCCACGCCGGAG
TCCTCCTGTTTTACCACGTGCACCAGCGGATGGATCCCATCTTTACGGAG
CCGCGGCCAGATGTGGATTCGCTTCCTGTCGACACTTGTCTACGCCTGGA
CACGTCGACCAACACCCTTTGCGTGGCAGAGGGTAGCCTTGTGGACTATG
GGAAGCGTACGTGGGGGGACACGAGATTGGTGGTCGGGCGCAGGGAGGGG
AGGGCTACACGTATGGTGGTGCGGCTGACCAAGAAGTACATCCCCAGGGC
GCTGACGCTACACCCCCGAGAAGATGGTGTCGAACCCCAGGCGCTCGATC
AACTTATAAAATACGCTGGGCTTGATGCCCACGCCGGAGTCCTCCTGTTT
TACCACGTGCACCAGCGGATGGATCCCATCTTTACGGAGCCGCGGCCAGA
TGTGGATTCGCTTCCTGTCGACACTTGTCTACGCCTGGACACGTCGACCA
ACACCCTTTGCGTGGCAGAGGGTAGCCTTGTGGACTATGGGAAGCGTACG
TGGGGGGACACGAGATTGGTGGTCGGGCGCAGGGAGGGGAGGGCTACACG
TATGGTGGTGCGGCTGACCAAGAAGTACATCCCCAGGGCGCTGACGCTAC
ACCCCCGAGAAGATGGTGTCGAACCCCAGGCGCTCGATCAACTTGAACTG
CCGACTGTTAGGCCTGCGGAGGCAGAGCGGCAACCGGAATCGGGCGCCGC
GGCCACGGATGGGGCTTCTGCCCTCACCTCACCCACTTCCAAGCTCGCGG
GGGGAGGGGGGAGGGCGATTTCGTCTGTGAGAGGGGGGACTTCGGGTGCT
GATGGTGAACTGCCGACTGTTAGGCCTGCGGAGGCAGAGCGGCAACCGGA
ATCGGGCGCCGCGGCCACGGATGGGGCTTCTGCCCTCACCTCACCCACTT
CCAAGCTCGCGGGGGGAGGGGGGAGGGCGATTTCGTCTGTGAGAGGGGGG
ACTTCGGGTGCTGATGGTAACGCGTCGAAGGCGAACGGGGAATACCGCCC
TTTCTGCGGTTCTCTGAGGGATGCCTTGGCGATACCGGATCCTGAAGTCA
TGGCTCGCGTGAGGGCGGTGGTGCAGAAGCGACGCCCTTCGCAGGGCGAA
AAGGAGCTCATCGCCTTCATGGGAGGGAACTTCTCGAACCTCATCTTGAA
GCATGTCCCACGAGTAGTGCCTCCTCCAGACGTCGTTGTTCCGCGATTCG
AGAACGTCATCGACACTTTCAAGGAGGTTCGGGACGGGGCTACAGAACGC
GTCGAAGGCGAACGGGGAATACCGCCCTTTCTGCGGTTCTCTGAGGGATG
CCTTGGCGATACCGGATCCTGAAGTCATGGCTCGCGTGAGGGCGGTGGTG
CAGAAGCGACGCCCTTCGCAGGGCGAAAAGGAGCTCATCGCCTTCATGGG
AGGGAACTTCTCGAACCTCATCTTGAAGCATGTCCCACGAGTAGTGCCTC
CTCCAGACGTCGTTGTTCCGCGATTCGAGAACGTCATCGACACTTTCAAG
GAGGTTCGGGACGGGGCTACAGGAGAAACGTTGTTCAAGAAAACGTTGAT
CAAGGCCGCAGATAACGCCCTCGAGCACCTGAAGAAGGGTTGTGTGAGTT
ATCCGGATCCCACCAAAGTTCAACTGTTCCAACTCTCAGGGCGCACGAAA
GACGGGCTCGACAAGGTCCGATCGGCGCGGGGCACCAACCGGAACGAGGG
CTATCACCAAGGCCTGCTCCGACGGCTAGGGGCCTTCAACTCCTCTCCAC
ACATGGCGCGCAACACCCTGCTCCCTCACAAATACAGGCGGAACCATCGC
ATGGCAGGAGAAACGTTGTTCAAGAAAACGTTGATCAAGGCCGCAGATAA
CGCCCTCGAGCACCTGAAGAAGGGTTGTGTGAGTTATCCGGATCCCACCA
AAGTTCAACTGTTCCAACTCTCAGGGCGCACGAAAGACGGGCTCGACAAG
GTCCGATCGGCGCGGGGCACCAACCGGAACGAGGGCTATCACCAAGGCCT
GCTCCGACGGCTAGGGGCCTTCAACTCCTCTCCACACATGGCGCGCAACA
CCCTGCTCCCTCACAAATACAGGCGGAACCATCGCATGGCAGTTCTTCAC
CGAGGCATGCCCTCCGAGCTCCAAGGCTTCTACAACCACGTGGTCGAGGA
CATCCAGGCCGTCACGCGCGGGTGGTACGACGACGAGCCTCTCTACCCTG
GATTCTTCACCGAGGCATGCCCTCCGAGCTCCAAGGCTTCTACAACCACG
TGGTCGAGGACATCCAGGCCGTCACGCGCGGGTGGTACGACGACGAGCCT
CTCTACCCTGGA
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