mRNA_P-fluviatile_contig13.1985.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1985.1 vs. uniprot
Match: A0A6H5KCI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI5_9PHAE) HSP 1 Score: 263 bits (672), Expect = 3.480e-84 Identity = 133/143 (93.01%), Postives = 136/143 (95.10%), Query Frame = 1
Query: 40 MNEAVIETVQTLCREGNRDSVLTVFQNFPEHFSCIPLNDSNVESKQAINDLLRENVILNGVKFFSGHGELFLESLRQVVEILSSSPEYKGGRTGSEIVERVLCKASRTTSGSDSYFTVDQLFTNSDYLLKRRSERLPPINVEV 468
MN+ VIETVQTLCR+GNRDSVLTVFQNFPEHFSCIPLNDSNVESKQAINDLLRENVILNGVKFFSGHGELFLESLRQVVEILS SP YKG RTGSEIVERVLCKASRTTSGSDSYFTV QLFTNSDYLLK+RSER P INVEV
Sbjct: 1 MNQTVIETVQTLCRKGNRDSVLTVFQNFPEHFSCIPLNDSNVESKQAINDLLRENVILNGVKFFSGHGELFLESLRQVVEILSKSPAYKGHRTGSEIVERVLCKASRTTSGSDSYFTVQQLFTNSDYLLKKRSERPPAINVEV 143
BLAST of mRNA_P-fluviatile_contig13.1985.1 vs. uniprot
Match: A0A835YHT3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHT3_9STRA) HSP 1 Score: 154 bits (390), Expect = 1.940e-43 Identity = 83/144 (57.64%), Postives = 105/144 (72.92%), Query Frame = 1
Query: 40 MNEAVIETVQTLCREGNRDSVLTVFQNFPEHFSCIPLNDSNVESKQAINDLLRENVILNGVKFFSGHGELFLESLRQVVEILSSSPEYKGGRTGSEIVERVLCKASRTTSGSDSYFTVDQLFT-NSDYLLKRRSERLPPINVEV 468
MN ++ Q LC +R+ + +F N+ EHF IPL+DS+V QAINDL+RENVILNGV FF GH + FL++LR+VV++ +SS EY G T SEI +RVL KASRTTSGSDSYFTV QLF+ + +YLLK R LPPI V+V
Sbjct: 1 MNPHLVARAQELCVANDREELKALFANYYEHFGAIPLDDSDVTDSQAINDLVRENVILNGVTFF-GHSQQFLKALRRVVDVWASSLEYTGALTASEISQRVLRKASRTTSGSDSYFTVQQLFSADENYLLKPRGFALPPIEVDV 143
BLAST of mRNA_P-fluviatile_contig13.1985.1 vs. uniprot
Match: A0A7S3UYC6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYC6_HETAK) HSP 1 Score: 85.9 bits (211), Expect = 4.090e-16 Identity = 56/147 (38.10%), Postives = 83/147 (56.46%), Query Frame = 1
Query: 34 EKMNEAVIETVQTLCREGNRDSVLTVFQNFPEHFSC--IPLNDSNVESKQAINDLLRENVILNGVKFFSGHGELFLESLRQVVEILSSSPEYKGGRTGSEIVERVLCKASRTTSGSDSYFTVDQLFTNSDYLLKRRSERLPPINVEV 468
++++ ++E ++ + G+++ + VFQ+ + FS I L + VE QA D+ RE VI NGV FF G+ E F+ L V L + R EI E +L KASRT SG DSYF V++LF +LLK R E PP+ V++
Sbjct: 9 QQLDRRLLEALRVARKSGSKNKFIKVFQSEDKRFSLNRILLPMAEVEPDQAKRDMQREKVIFNGVNFF-GYQERFVPFLESYVRRLVKKLRWPPQRA-QEITEAILEKASRTASGYDSYFFVNELFEVPGHLLKPRFEPTPPVRVDL 153
BLAST of mRNA_P-fluviatile_contig13.1985.1 vs. uniprot
Match: W4H072_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H072_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 5.250e-13 Identity = 45/128 (35.16%), Postives = 74/128 (57.81%), Query Frame = 1
Query: 76 CREGNRDSVLTVFQNFPEHFSCIPLNDS-NVESKQAINDLLRENVILNGVKFFSGHG-ELFLESLRQVVEILSSSPEYKGGRTGSEIVERVLCKASRTTSGSDSYFTVDQLFTNSDYLLKRRSERLPP 453
CR+ + VL + P IPL+ +V++ QA D +RE+++LNGV+F H E F+ +++++VE S+P + + +RV+ SRT SG+DSYF + +LF + D L+K R + PP
Sbjct: 45 CRKADFHEVLGGTSHTPSVLRRIPLSPRCDVDTAQAFRDAVREDIVLNGVQFVGDHRTEAFVAAVKRIVEKYISTP-----KKSLHVSDRVMRSCSRTHSGADSYFALQELFGHPDLLIKPRQDPPPP 167
BLAST of mRNA_P-fluviatile_contig13.1985.1 vs. uniprot
Match: A0A1V9YR98_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YR98_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 4.700e-11 Identity = 38/109 (34.86%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 151 NDSNVESKQAINDLLRENVILNGVKFFSGHG-ELFLESLRQVVEILSSSPEYKGGRTGSEIVERVLCKASRTTSGSDSYFTVDQLFTNSDYLLKRRSERLPPINVEVRR 474
+D V++ QA D +RE+++LNGV+F H E F+ +++++V+ P+ K + +RV+ + SRT SG+DSYF + +LF D+L+K R PP+++ + R
Sbjct: 49 SDCEVDTVQAFRDAVREDIMLNGVRFVGDHRTEAFVAAVKRIVQ--KFLPQDKA----LAVSDRVMRRCSRTHSGTDSYFALQELFGGPDFLIKPRQGGTPPLDIALGR 151
BLAST of mRNA_P-fluviatile_contig13.1985.1 vs. uniprot
Match: A0A024U3Z4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U3Z4_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.130e-10 Identity = 37/98 (37.76%), Postives = 60/98 (61.22%), Query Frame = 1
Query: 163 VESKQAINDLLRENVILNGVKFFSGHG-ELFLESLRQVVEILSSSPEYKGGRTGSEIVERVLCKASRTTSGSDSYFTVDQLFTNSDYLLKRRSERLPP 453
V + QA D +RE+++LNGV+F H E F+ +++++VE + P R + +RV+ SRT SG+D+YF + +LF + D L+K RS+ PP
Sbjct: 67 VNTAQAFRDAVREDIVLNGVQFVGDHRTEAFVAAVKRIVEKFVTKP-----RKALHVSDRVMRSCSRTHSGADAYFALQELFGHPDLLIKPRSDPPPP 159
BLAST of mRNA_P-fluviatile_contig13.1985.1 vs. uniprot
Match: A0A6G0WX74_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WX74_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.030e-9 Identity = 55/162 (33.95%), Postives = 87/162 (53.70%), Query Frame = 1
Query: 76 CREGNRDSVLTVFQNFPEHFSCIPLNDS-NVESKQAINDLLRENVILNGVKFFSGHG-ELFLESLRQVVE--ILSSSPE--------YKGGRTGSEIVERVLCKASRTTSGSDSYFTVDQLFTNSDYLLKRRSERLP-PINVEVRRF----CVVAVATVVGV 510
CR+ + VL N P+ IPL+ +V + QA D +RE+++LNGV+F H E F+ +++++VE +L E Y + +RV+ SRT SG+DSYF ++QLF + D L+K R LP +N+ V R C ++VA + G+
Sbjct: 58 CRKADFLEVL----NEPKLLRKIPLSPHCDVPTAQAFRDAVREDIVLNGVQFAGEHRTEAFVAAVKRIVEKSVLLRRLESRDCIMSRYVPKSRALLVSDRVMRSCSRTHSGADSYFALEQLFGHPDLLIKPRPGCLPLHVNLGVDRNGVVKCKISVANLYGI 215
BLAST of mRNA_P-fluviatile_contig13.1985.1 vs. uniprot
Match: A0A067BJU8_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BJU8_SAPPC) HSP 1 Score: 65.9 bits (159), Expect = 2.270e-9 Identity = 37/115 (32.17%), Postives = 68/115 (59.13%), Query Frame = 1
Query: 136 SCIPLNDS-NVESKQAINDLLRENVILNGVKFFSGHG-ELFLESLRQVVEILSSSPEYKGGRTGSEIVERVLCKASRTTSGSDSYFTVDQLFTNSDYLLKRRSERLPPINVEVRR 474
S +PL+ +V++ QA D +RE+++LNGV+F H E F+ +++++V+ + E +R++ + SRT SG+DSYF + +LF + L+K R PP+++ + R
Sbjct: 45 SRLPLSPQCDVDTVQAFRDAVREDIMLNGVRFVGDHRTEAFVAAVKRIVQKFVPKDQCL------EASDRIMRRCSRTHSGTDSYFALQELFGTTGLLIKPRPGGTPPLDISLGR 153
BLAST of mRNA_P-fluviatile_contig13.1985.1 vs. uniprot
Match: T0SI70_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SI70_SAPDV) HSP 1 Score: 64.7 bits (156), Expect = 5.910e-9 Identity = 36/113 (31.86%), Postives = 67/113 (59.29%), Query Frame = 1
Query: 142 IPLNDS-NVESKQAINDLLRENVILNGVKFFSGHG-ELFLESLRQVVEILSSSPEYKGGRTGSEIVERVLCKASRTTSGSDSYFTVDQLFTNSDYLLKRRSERLPPINVEVRR 474
+PL+ +V++ QA D +RE+++LNGV+F H E F+ +++++V+ + E +R++ + SRT SG+DSYF + +LF + L+K R PP+++ + R
Sbjct: 47 LPLSSHCDVDTAQAFRDAVREDIMLNGVRFVGDHRTEAFVAAVKRIVQKFLPKDQCL------EASDRIMRRCSRTHSGTDSYFALQELFGATGLLIKPRPGGTPPLDIRLGR 153
BLAST of mRNA_P-fluviatile_contig13.1985.1 vs. uniprot
Match: A0A7S2SQ39_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQ39_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 1.430e-8 Identity = 39/99 (39.39%), Postives = 58/99 (58.59%), Query Frame = 1
Query: 172 KQAINDLLRENVILNGVKFFSGHGELFLESLRQVVEILSSSPEYKGGRTGSEIVERVLCKASRTTSGSDSYFTVDQLFTNSDYLLKRRSERLPPINVEV 468
+Q DL RE ++LN V FF G E+F+E L +V LS+ Y T + I + +L +ASRT SG D++F V +LF +D++L + PI +EV
Sbjct: 22 EQIKGDLQREKIVLNQVPFF-GDAEIFIEVLVDLVRELSTP--YTAEDT-TRITQALLTRASRTYSGGDAFFAVQELFGTTDFVLMPLKRQTAPIVMEV 116 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1985.1 >prot_P-fluviatile_contig13.1985.1 ID=prot_P-fluviatile_contig13.1985.1|Name=mRNA_P-fluviatile_contig13.1985.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=158bp MNEAVIETVQTLCREGNRDSVLTVFQNFPEHFSCIPLNDSNVESKQAINDback to top mRNA from alignment at P-fluviatile_contig13:3423464..3427507- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1985.1 ID=mRNA_P-fluviatile_contig13.1985.1|Name=mRNA_P-fluviatile_contig13.1985.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4044bp|location=Sequence derived from alignment at P-fluviatile_contig13:3423464..3427507- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:3423464..3427507- >mRNA_P-fluviatile_contig13.1985.1 ID=mRNA_P-fluviatile_contig13.1985.1|Name=mRNA_P-fluviatile_contig13.1985.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=948bp|location=Sequence derived from alignment at P-fluviatile_contig13:3423464..3427507- (Porterinema fluviatile SAG_2381)back to top |