mRNA_P-fluviatile_contig13.1976.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1976.1 vs. uniprot
Match: A0A6H5KC60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC60_9PHAE) HSP 1 Score: 420 bits (1080), Expect = 1.620e-128 Identity = 233/361 (64.54%), Postives = 255/361 (70.64%), Query Frame = 1
Query: 3778 MATPMSQSMSAILSKHYLGEFNMRLGNITCTELVRPLSQNGLKHLERSIKDVGWLENFAPSVVIQRDRLGDSDKLTAEAALITPAHTLDGNHRVATLKNMFGEDGVFLVRVYLEFKQADERLIANALNDATENVVQRTLYDKVYFQHELEEAIKREMKKGKVTQADIRRMYERVGVVPPPKTTLRNWQLAVDALHPESFQVLKEVCQSNEAEVDGAAVTLAYLTRKVFAEFSALQQGLCIHILGRFKYMNKRLPHSKDYEDIDKNAGIAASFVENVVNMVPRDDWTPELRREVNRLAHEKPTQLALYVKPHHEKATDEAKRLLAKVSTGDQASSHVVQLKESISKVVPSTPLPRIRHVSLT 4860
MA Q MSA+LSKHYLGEF MRL NITCTE+VRPLSQNGL+HLERSI++VGW+E+FAPSVVIQRD LGDS +LTAEAAL PAHTLDGNHRV TLK M+GE GVFLVRVYLEF QADERLIANALNDATE+VVQ TLYDKVYFQHELEEAIKREMKK KVTQADIRRM FK+MNK+LP +KDY DIDKNAGIAASFVENV+ +VPRDDWTPELRR L+HEKP QLALYVKPHH++ DEAKRLL +VST D+ASSHVVQLKESIS VVPS PLPRIR+VS+T
Sbjct: 1 MANRTLQDMSAVLSKHYLGEFKMRLCNITCTEMVRPLSQNGLQHLERSIQEVGWIESFAPSVVIQRDHLGDSRELTAEAALTAPAHTLDGNHRVTTLKKMYGESGVFLVRVYLEFNQADERLIANALNDATESVVQPTLYDKVYFQHELEEAIKREMKKDKVTQADIRRM---------------------------------------------------------------------------FKFMNKKLPGAKDYADIDKNAGIAASFVENVLKLVPRDDWTPELRR----LSHEKPNQLALYVKPHHKQQVDEAKRLLEEVSTADKASSHVVQLKESISTVVPSMPLPRIRNVSVT 282
BLAST of mRNA_P-fluviatile_contig13.1976.1 vs. uniprot
Match: A0A6H5LBJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBJ9_9PHAE) HSP 1 Score: 318 bits (815), Expect = 8.280e-88 Identity = 191/358 (53.35%), Postives = 209/358 (58.38%), Query Frame = 1
Query: 3778 MATPMSQSMSAILSKHYLGEFNMRLGNITCTELVRPLSQNGLKHLERSIKDVGWLENFAPSVVIQRDRLGDSDKLTAEAALITPAHTLDGNHRVATLKNMFGEDGVFLVRVYLEFKQADERLIANALNDATENVVQRTLYDKVYFQHELEEAIKREMKKGKVTQADIRRMYERVGVVPPPKTTLRNWQLAVDALHPESFQVLKEVCQSNEAEVDGAAVTLAYLTRKVFAEFSALQQGLCIHILGRFKYMNKRLPHSKDYEDIDKNAGIAASFVENVVNMVPRDDWTPELRREVNRLAHEKPTQLALYVKPHHEKATDEAKRLLAKVSTGDQASSHVVQLKESISKVVPSTPLPRIRHV 4851
MA Q MSA+LSKHYLGEF MRL NITCTE+VRPLSQNGL+HLERSI++VGW+E+FAPSVVIQRD LGDS +LTAEAAL PAHTLDGNHRV TLK M+GE GVFLVRVYLEF QADERLIANALNDAT++VVQRTLYDKVYFQHELEEAIKREMKK KVTQADIRR RL+H KP QLALYVKPHH++ DEAKRLL KVST D+AS++VVQLKESIS VVPS PLPRIR+V
Sbjct: 1 MANRTLQDMSAVLSKHYLGEFMMRLCNITCTEMVRPLSQNGLQHLERSIQEVGWIESFAPSVVIQRDHLGDSRELTAEAALTAPAHTLDGNHRVTTLKKMYGESGVFLVRVYLEFNQADERLIANALNDATQSVVQRTLYDKVYFQHELEEAIKREMKKDKVTQADIRR-----------------------------------------------------------------------------------------------------------------------------RLSHAKPNQLALYVKPHHKQQADEAKRLLEKVSTADRASTYVVQLKESISTVVPSMPLPRIRNV 233
BLAST of mRNA_P-fluviatile_contig13.1976.1 vs. uniprot
Match: A0A6H5KMU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU9_9PHAE) HSP 1 Score: 189 bits (481), Expect = 2.550e-52 Identity = 95/119 (79.83%), Postives = 105/119 (88.24%), Query Frame = 1
Query: 3778 MATPMSQSMSAILSKHYLGEFNMRLGNITCTELVRPLSQNGLKHLERSIKDVGWLENFAPS-VVIQRDRLGDSDKLTAEAALITPAHTLDGNHRVATLKNMFGEDGVFLVRVYLEFKQA 4131
MA + Q MSA+LS+HYLGEF MRLGNITCTE+VRPLSQNGLKHLERSI++VGWLE+FAPS VVIQ+DRLGDSD+ AEAAL TPAHTLD NHRVATLK M GE GVFLVRVYLEF+ A
Sbjct: 1 MANRIHQDMSAVLSEHYLGEFKMRLGNITCTEMVRPLSQNGLKHLERSIQEVGWLESFAPSSVVIQQDRLGDSDEPAAEAALTTPAHTLDSNHRVATLKKMDGESGVFLVRVYLEFRHA 119
BLAST of mRNA_P-fluviatile_contig13.1976.1 vs. uniprot
Match: A0A6H5JUU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU1_9PHAE) HSP 1 Score: 148 bits (373), Expect = 2.000e-32 Identity = 109/344 (31.69%), Postives = 134/344 (38.95%), Query Frame = -3
Query: 293 CN*RVQEFYQEFLNELERVHPGDRSKIVSRNHFYRILRAERRNVRVKSGGDFMKCDMCVTFKEVLGAASGGAQPTHDPETRFAARQKLAKHREVRCQFSVYVVDGAI*PNLYAICRALGACT*VREDKVFLG*NSCSRMYYMFFSQDVQNDRLVIAKQTAAAMRAKADGKPLDFVFM---AANQTSHALPTLYPPTHGSDRYYAHASTAEIRCRHTRAGCCT*TSILRQHPEEKARSYRFGLLWVREYTYPVSLHVCLVKNTQSASLILVV*YRCGTDALSCPSRLPRSTSTCTFTPLTSIAADTACTFYALDRGYPERQKIMSAHVEGQFVDVYFTPQYLGGG 1315
C+ +E YQ+FL E +RV+P D SK VS+ HF+RI R +R ++RV+ GG+FMKCD+CVT KE S G +P+ D + + LA HR++ VQ DRLVIA +T AMRAKADGKPL+FVFM AAN TSHALP +YPPTHG DR GY ERQKIM+ H+EGQFV+VYFTPQYLGGG
Sbjct: 10 CSSNKEELYQDFLTEAKRVYPEDTSKRVSKAHFFRIPRKDRPHIRVRVGGEFMKCDICVTLKE-RRHGSPGVKPSLDSSALASIDRDLAAHRQM-----------------------------------------------------VQADRLVIANRTGDAMRAKADGKPLNFVFMSIDAANSTSHALPAIYPPTHGGDR-----------------------------------------------------------------------------------------------------------------GYSERQKIMAVHIEGQFVEVYFTPQYLGGG 186
BLAST of mRNA_P-fluviatile_contig13.1976.1 vs. uniprot
Match: A0A6H5KJN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN8_9PHAE) HSP 1 Score: 113 bits (282), Expect = 9.060e-22 Identity = 105/391 (26.85%), Postives = 172/391 (43.99%), Query Frame = 1
Query: 3754 HESDPSPIMATPMSQSMSAILSKHYLGEFNMRLGNITCTELVRPLSQNGLKHLERSIKDVGWLENFAPSVVIQRDRLGDSDKLTAEAALITPAHTLDGNHRVATLKNMFGEDGVFLVRVYLEFKQADERLIANAL-NDATENVVQRTLYDKVYFQHELEEAIKRE--------------MKKGKVTQADIRRMYERVGVVPPPKTTLRNWQLAVDALHPESFQVLKEVCQSNEAEVDG-AAVTLAYLTRKVFAEFSALQ---QGLCIHILGRFKYMNKRLPHSKDYEDIDK------NAGIAASFVENVVNMVPRDDWTPELRREVNRLAHEKPTQLALYVKPHHEKATDEAKRLLAKVSTGDQASSHVVQLKESISKVVPSTPLPRIRHV 4851
H DP+ + ++ +L+ H + E+++ L NIT E R S ++ + SI+ GW+++F P V+ L + ++T E A A +DGNHR+A K ++GED + Y + R IA+ + N T RT+YD++YF + + ++ + K VT A + ++ G P TLR W V+ E+ L+ + + V G ++T A+L E Q Q L + I R +K+ + E +D+ A + AS+VE + ++VPRD W+ +L+ V A K A YVKPH + E + L + HV L E + + S P IR V
Sbjct: 27 HSDDPT------SATNIGEVLASHCVKEWDVPLKNITLAENSRQTSPTAVQEVVESIQSHGWVDSF-PRVMFSD--LTEGQEMTVELAATLHAVVIDGNHRLAACKEVYGEDRLIRCTCYRFIADSFARQIASDVCNVTTATFRARTIYDQLYFYNRMMTSLMAQESESXXXXXXXXXSRSKSSVTAAKLAACWKGAGSQAPAANTLRQWISIVNDTGQEALVALRAL---TDQRVPGYQSITKAFLADPRVRELKEEQPQTQALLVDIYARIPKTSKK----GEREGLDEIGWALARAKMTASWVEGIEHVVPRDQWSDKLKGTVRDFAFVKTGHYANYVKPHQLEREAEVRELR------ESLPPHVKDLDEDVVLAIRSKLHPSIRKV 395
BLAST of mRNA_P-fluviatile_contig13.1976.1 vs. uniprot
Match: A0A6H5K2Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Z9_9PHAE) HSP 1 Score: 109 bits (272), Expect = 1.600e-20 Identity = 101/376 (26.86%), Postives = 166/376 (44.15%), Query Frame = 1
Query: 3799 SMSAILSKHYLGEFNMRLGNITCTELVRPLSQNGLKHLERSIKDVGWLENFAPSVVIQRDRLGDSDKLTAEAALITPAHTLDGNHRVATLKNMFGEDGVFLVRVYLEFKQADERLIANALNDATENVVQ-RTLYDKVYFQHELEEAIKRE--------------MKKGKVTQADIRRMYERVGVVPPPKTTLRNWQLAVDALHPESFQVLKEVCQSNEAEVDG-AAVTLAYLTRKVFAEFSALQ---QGLCIHILGRFKYMNKRLPHSKDYEDIDK------NAGIAASFVENVVNMVPRDDWTPELRREVNRLAHEKPTQLALYVKPHHEKATDEAKRLLAKVSTGDQASSHVVQLKESISKVVPSTPLPRIRHV 4851
++ +L+ H + E+++ L NIT E R S ++ + SI+ GW+++F P V+ L + ++T E A A +DGNHR+A K ++GED + Y R IA+ + + T Q RT+YD++YF + + ++ + K VT A + ++ G P TLR W V+ + L+ + + V G ++T A+L E Q Q L + I R +K+ + E +D+ A + AS+VE + ++VPRD W+ +L+ V A K A YVKPH + E + L + HV L E + + S P IR V
Sbjct: 36 NIGEVLASHCVKEWDVPLKNITLAENSRQTSPTAVQEVVESIQSHGWVDSF-PRVMFSD--LTEGQEMTVELAATLRAVVIDGNHRLAACKEVYGEDRLIRCTCYRFIADGFARQIASDVCNVTTATFQARTIYDQLYFYNRMMTSLMAQESESSSARRRPSNSRSKPSVTAAKLATCWKGAGSQAPAANTLRQWISIVNDTSQGALVALRAL---TDQRVPGYQSITKAFLADPRVRELREGQPQTQALLVDIYARMPKTSKK----GEREGLDEIGWALAGAKMTASWVEGIEHVVPRDQWSDKLKGTVRDFAFVKTGHYANYVKPHQLEREAEVRELR------ESLPPHVKDLDEDVVLAIRSKLHPSIRKV 395
BLAST of mRNA_P-fluviatile_contig13.1976.1 vs. uniprot
Match: A0A6H5K3G4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3G4_9PHAE) HSP 1 Score: 71.6 bits (174), Expect = 1.260e-9 Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 1
Query: 4513 FKYMNKRLPHSKDYEDIDKNAGIAASFVENVVNMVPRD-----------------DWTPELRREVNRLAHEKPTQLALYVKPHHEKATDEAKRLLAKVSTGDQASSHV 4785
FK++NK+ P SKDY ID NA +AA FV++V ++VP+ + + + REV++L+ KP QLALY+KPH E+ E K +L K G A ++
Sbjct: 50 FKFLNKKAPTSKDYLQIDANADLAAHFVQDVYDLVPKTSGRRSSKSLTRPLVGGVETSVFMGREVDKLSFRKPNQLALYIKPHAEEQKKEVKMMLDKEVCGPDAELYL 157 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1976.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1976.1 >prot_P-fluviatile_contig13.1976.1 ID=prot_P-fluviatile_contig13.1976.1|Name=mRNA_P-fluviatile_contig13.1976.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=382bp MATPMSQSMSAILSKHYLGEFNMRLGNITCTELVRPLSQNGLKHLERSIKback to top mRNA from alignment at P-fluviatile_contig13:3328654..3335238+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1976.1 ID=mRNA_P-fluviatile_contig13.1976.1|Name=mRNA_P-fluviatile_contig13.1976.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6585bp|location=Sequence derived from alignment at P-fluviatile_contig13:3328654..3335238+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:3328654..3335238+ >mRNA_P-fluviatile_contig13.1976.1 ID=mRNA_P-fluviatile_contig13.1976.1|Name=mRNA_P-fluviatile_contig13.1976.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2292bp|location=Sequence derived from alignment at P-fluviatile_contig13:3328654..3335238+ (Porterinema fluviatile SAG_2381)back to top |