mRNA_P-fluviatile_contig13.1971.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1971.1
Unique NamemRNA_P-fluviatile_contig13.1971.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig13.1971.1 vs. uniprot
Match: D8LT96_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT96_ECTSI)

HSP 1 Score: 764 bits (1972), Expect = 1.850e-272
Identity = 394/522 (75.48%), Postives = 453/522 (86.78%), Query Frame = 1
Query:  184 LWNIFGGGRGRGTSEEDEKSSLPVG-GAVDMTTLDITYITHRLLAIGCPVDGPSNRGANRNNVDDLADWLVNDHRGHFLVWNVSDSTQDGGRGXXXXXXXXXXXXXXXXXXXXXXXXXAVVSRKLHQRLLGQVLDVPWGSPNRRCYVPSYTHLLRICYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFDGEESTALDAYRRVWSKRDPEQYPEQVVLNTPRSLFDLFDNFDCCVRLGKPPRGGXXXGLLVGVGVNGLPLADPPVIEVYGPNELIFSSVQEG-GSEVIWDDDQGFFKINQSLAGDFVLIARFHGTDGAAETGPEGVLFRYCNHTCFLPQ-EEIILRKSEVDVMPSYRDQIPDDLFSVSLMIVPEDSDEADPSFAFQEQQTVKAGIAATRQGLADLSSFHFVTPLLPKLDKLLGQGYPPEASTLALQLSNNDLTAAVELMRETQLRDLMTYRLSEFSPRSMDSGFSPNRGLRSKSISVVSPGSMLESDHGDLSLEHYDDSQHSRASLGG 1740
            +WN FG G  +  +EEDE + L +G G VDMTTLDITYITHRLLAIGCPVDGPS+R ANRNNVDDL++WLVNDH+GHFLVWN+SD   +             XXXXXXXXXXXXX     VSRKLHQRL GQVLD+PWGS NRRCYVPS  HLLR+CYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRF+GEESTAL+AYRRVW+KRDPEQ PEQV+L+TPRSLF LFDNFDCC+RLG+PPRGG   GLLVGV +NGLPLA+PPV+EVYGP +L++SS QE   S V+W++DQGFFK+N+ L GDFV+IARF GTDGAAETGPEGVLFRYCNHTCFLPQ E+++LRKSEVDVMPSYRDQIPDD+FSVSL++VPE+ ++A  SF+FQEQ  VK G AAT+QGLADLSSFHFVTPLLP+LDKLLG+G+PPEASTLALQL+NNDL+AA+ +M+E+ L+DLMTYRL+  SPRS + GFSPNRGLR+KSISVVSPGSMLESD G+LSL+HY+DSQHSR SL G
Sbjct:    1 MWNFFGKGY-KEAAEEDEDNDLSLGTGPVDMTTLDITYITHRLLAIGCPVDGPSDRDANRNNVDDLSNWLVNDHKGHFLVWNISDHRSN-------------XXXXXXXXXXXXXAAGTQVSRKLHQRLQGQVLDIPWGSRNRRCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKRDPEQKPEQVILHTPRSLFALFDNFDCCIRLGRPPRGGAGGGLLVGVALNGLPLAEPPVLEVYGPTQLLYSSTQEEEDSHVLWNEDQGFFKVNKPLTGDFVVIARFKGTDGAAETGPEGVLFRYCNHTCFLPQGEQVVLRKSEVDVMPSYRDQIPDDVFSVSLVLVPEEEEDAGSSFSFQEQDQVKVGPAATQQGLADLSSFHFVTPLLPRLDKLLGRGFPPEASTLALQLANNDLSAAITMMKESPLQDLMTYRLA-LSPRSSE-GFSPNRGLRAKSISVVSPGSMLESDQGNLSLDHYEDSQHSRDSLDG 506          
BLAST of mRNA_P-fluviatile_contig13.1971.1 vs. uniprot
Match: A0A6H5JR06_9PHAE (FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR06_9PHAE)

HSP 1 Score: 788 bits (2034), Expect = 1.870e-253
Identity = 411/568 (72.36%), Postives = 474/568 (83.45%), Query Frame = 1
Query:  184 LWNIFGGGRGRGTSEEDEKSSLPVGGA-VDMTTLDITYITHRLLAIGCPVDGPSNRGANRNNVDDLADWLVNDHRGHFLVWNVSDSTQDGGRGXXXXXXXXXXXXXXXXXXXXXXXXXAVVSRKLHQRLLGQVLDVPWGSPNRRCYVPSYTHLLRICYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFDGEESTALDAYRRVWSKRDPEQYPEQVVLNTPRSLFDLFDNFDCCVRLGKPPRGGXXXGLLVGVGVNGLPLADPPVIEVYGPNELIFSSVQEG-GSEVIWDDDQGFFKINQSLAGDFVLIARFHGTDGAAETGPEGVLFRYCNHTCFLPQ-EEIILRKSEVDVMPSYRDQIPDDLFSVSLMIVPEDSDEADPSFAFQEQQTVKAGIAATRQGLADLSSFHFVTPLLPKLDKLLGQGYPPEASTLALQLSNNDLTAAVELMRETQLRDLMTYRLSEFSPRSMDSGFSPNRGLRSKSISVVSPGSMLESDHGDLSLEHYDDSQHSRASLGGXXXXXXXXXXXXXXXXXXVSNGSLSIRASSGFPRENSGGLSSSSAA 1878
            +WN FG G  +  +EEDE + L +G   VDMTTLDITYITHRLLAIGCPVDGPS+R ANRNN+DDL++WLVNDH+GHFLVWN+SD   D G              XXXXXXXXXX     VSRKLHQRL GQVLD+PWGS NRRCYVPS  HLLR+CYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRF+GEESTAL+AYRRVW+KRDPEQ PEQV+L+TPRSLF LFDNFDCC+RLG+PPRGG   GLLVGV +NGLPLA+PPV+EVYGP +L++SS QE   S V+W++DQGFFK+N+ L GDFV+IARF GTDGAAETGPEGVLFRYCNHTCFLPQ E+++LRKSEVDVMPSYRDQIPDD+FSVSL++VPE+ ++A  SF+FQEQ  VK G AAT+QGLADLSSFHFVTPLLP+LDKLLG+G+PPEASTLALQL+NNDL+AA+ +M+E+ L+DLMTYRL+  SPRS + GFSPNRGLR+KSISVVSPGSMLESD G+LSL+HYDDS HSR SL G                  V+  SL++RASSGFPRENSGG+ SS+AA
Sbjct:    1 MWNFFGKGY-KEVAEEDEDNDLSLGTRPVDMTTLDITYITHRLLAIGCPVDGPSDRDANRNNIDDLSNWLVNDHKGHFLVWNISDHRSDNGX-------------XXXXXXXXXXAAGTQVSRKLHQRLQGQVLDIPWGSRNRRCYVPSIRHLLRVCYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFEGEESTALEAYRRVWAKRDPEQKPEQVILHTPRSLFALFDNFDCCIRLGRPPRGGAGGGLLVGVALNGLPLAEPPVLEVYGPTQLLYSSTQEEEDSHVLWNEDQGFFKVNKPLTGDFVVIARFKGTDGAAETGPEGVLFRYCNHTCFLPQGEQVVLRKSEVDVMPSYRDQIPDDVFSVSLVLVPEEEEDAGSSFSFQEQDQVKVGPAATQQGLADLSSFHFVTPLLPRLDKLLGRGFPPEASTLALQLANNDLSAAITMMKESPLQDLMTYRLA-LSPRSSE-GFSPNRGLRAKSISVVSPGSMLESDQGNLSLDHYDDSHHSRDSLDGPGGGIGALG---------VTTSSLAVRASSGFPRENSGGILSSNAA 543          
BLAST of mRNA_P-fluviatile_contig13.1971.1 vs. uniprot
Match: A0A329RR16_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A329RR16_9STRA)

HSP 1 Score: 180 bits (456), Expect = 6.290e-44
Identity = 131/462 (28.35%), Postives = 212/462 (45.89%), Query Frame = 1
Query:  262 AVDMTTLDITYITHRLLAIGCPVDGPSNRGANRNNVDDLADWLVNDHRGHFLVWNVS---DSTQDGGRGXXXXXXXXXXXXXXXXXXXXXXXXXAVVSRKLHQRLLGQVLDVPWGSPNRRCYVPSYTHLLRICYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRF----DGEESTALDAYRRVWSKRDPEQYPEQVVLNTPRSLFDLFDNFDCCVRLGKPPRGGXXXGLLVGVGVNGLPLADPPVIEVYGPNELIFSS----VQEGGSEVI--WDDDQGFFKI----NQSLAGDFVLIARF-HGTDGAAETGPEG-VLFRYCNHTCFLPQEEIILRKSEVDVMPSYRDQIPDDLFSVSLMIVPEDSDEADPSFAFQEQQTVKAGIAATRQGLADLSSFHFVTPLLPKLDKLLGQGYPPEASTLALQLSNNDLTAAVELMRETQLRDLMTYRLSEFSPR 1590
            A D  +L++T++T RL+ +G P DGP+++  N  NVDDL  +L  +HRGHF+++N++   D+T D GR                            V+ KLH+    Q+L+  W     + + P    + RICY++  W  LDP+++A V C  GK R+ V++ACYL F    D      ++ YRR W  +     P+ +   TP S+      F   +   KPP       LL  V    LP+   P ++++   +L+F +    + E G   +  W+++ GFF I       L G F ++  F    D A +      VLFRY + T FL    + L+K ++D+M  Y     +D FSV L++    + ++  S           G +A RQGL +++  H V P        +  G+    +T ALQ S N    A++L+    L        +E + +
Sbjct:   27 APDARSLELTFMTERLMVVGAPCDGPTDKKRNMVNVDDLVHFLEVNHRGHFMLFNLNALDDATADEGR--------------------------QSVADKLHE----QLLEFNWERDGMKAHTPPLDLIFRICYALDAWFSLDPQHVALVNCQTGKTRSGVVVACYLLFARLADDPTDAFVEFYRRRWDMKS--LTPQALKKKTPPSIQRFLTGFHELLEHQKPPNDKPL--LLKAVIFRQLPVELQPCVQIWDDYKLVFCTDELQIGESGEAPVLDWNEEDGFFAILWENGVELDGGFSILCSFGEDYDNADDVDASSRVLFRYADSTLFLLPGLVTLKKHDLDLMKQYEHGFDEDQFSVDLVLHENSTKKSRNSVRMDY-----TGNSAVRQGLIEITKHHVVLPDPAMHSNFIRMGFCETPTTFALQCSQNAPNVALDLLHSKGLSACFAQETAELAAK 449          
BLAST of mRNA_P-fluviatile_contig13.1971.1 vs. uniprot
Match: W2R8I3_PHYPN (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=W2R8I3_PHYPN)

HSP 1 Score: 177 bits (450), Expect = 3.630e-43
Identity = 131/463 (28.29%), Postives = 210/463 (45.36%), Query Frame = 1
Query:  268 DMTTLDITYITHRLLAIGCPVDGPSNRGANRNNVDDLADWLVNDHRGHFLVWNVS---DSTQDGGRGXXXXXXXXXXXXXXXXXXXXXXXXXAVVSRKLHQRLLGQVLDVPWGSPNRRCYVPSYTHLLRICYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRF----DGEESTALDAYRRVWSKRDPEQYPEQVVLNTPRSLFDLFDNFDCCVRLGKPPRGGXXXGLLVGVGVNGLPLADPPVIEVYGPNELIFSS----VQEGGSEVI--WDDDQGFFKI----NQSLAGDFVLIARF-HGTDGAAETGPEG-VLFRYCNHTCFLPQEEIILRKSEVDVMPSYRDQIPDDLFSVSLMIVPEDSDEADPSFAFQEQQTVK---AGIAATRQGLADLSSFHFVTPLLPKLDKLLGQGYPPEASTLALQLSNNDLTAAVELMRETQLRDLMTYRLSEFSPR 1590
            D  +L++T++T RL+ +G P DGP+++  N  NVDDLA +L   HRGHF+++N++   D+  D GR                            V+ KLH+    Q+L+  W     + + P    + RICY++  WL LDP+++A V C  GK R+ V++ACYL F    D      ++ YR+ W  +     P  +   TP S+      F   +   KPP       LL  V    LP+   P ++++   +L+F +    + E G   +  W+++ GFF I       L G F ++  F    D A +      VLFRY + T FL    + L+K ++D+M  Y     +D FSV L++          +   + +  VK    G  A RQGL +++  H V P        +  G+    +T ALQ S N    A++L+    L        +E + +
Sbjct:   29 DARSLELTFMTERLMVVGAPCDGPTDKKRNMVNVDDLAQYLDTQHRGHFMLFNLNALEDAAADDGR--------------------------QSVADKLHE----QLLEFNWERDGMKAHTPPLDLIFRICYALDAWLSLDPQHVALVNCQTGKTRSGVVVACYLLFARLADDPTDAFVEFYRKRWDMKS--LTPHALKKKTPPSIQRFLTGFHELLAQQKPPNAKPL--LLKAVIFRQLPVELQPCVQIWDDYKLVFCTDELQIGENGEAPVLDWNEEDGFFAILWENGIELDGGFSILCSFGEDYDNADDVDASSRVLFRYADSTLFLVPGLVTLKKHDLDLMKQYEHGFDEDQFSVDLVL--------HENNIKKSRNLVKMDYTGNNAVRQGLIEITKHHVVLPDPAMHSNFIRMGFCETPTTFALQCSQNAPNVALDLLHSKGLSACFAQETAELAAK 449          
BLAST of mRNA_P-fluviatile_contig13.1971.1 vs. uniprot
Match: D0P0E1_PHYIT (Formin-homology 2 domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0P0E1_PHYIT)

HSP 1 Score: 177 bits (449), Expect = 4.940e-43
Identity = 132/446 (29.60%), Postives = 207/446 (46.41%), Query Frame = 1
Query:  268 DMTTLDITYITHRLLAIGCPVDGPSNRGANRNNVDDLADWLVNDHRGHFLVWNVS---DSTQDGGRGXXXXXXXXXXXXXXXXXXXXXXXXXAVVSRKLHQRLLGQVLDVPWGSPNRRCYVPSYTHLLRICYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRF----DGEESTALDAYRRVWSKRDPEQYPEQVVLNTPRSLFDLFDNFDCCVRLGKPPRGGXXXGLLVGVGVNGLPLADPPVIEVYGPNELIFSS----VQEGGSEVI--WDDDQGFFKI----NQSLAGDFVLIARF-HGTDGAAETGPEG-VLFRYCNHTCFLPQEEIILRKSEVDVMPSYRDQIPDDLFSVSLMIVPEDSDEADPSFAFQEQQTVKAGIAATRQGLADLSSFHFVTPLLPKLDKLLGQGYPPEASTLALQLSNNDLTAAVELMRETQL 1548
            D  +L+IT++T RL+ +G P DGP+++  N  NV DLA +L   HRGHF+ +N++   D+T D GR                            V+ KLH+    Q+L+  W     + + P    + RICY++  WL LDP ++A V C  GK R+ V++ACYL F    D      ++ YR+ W  +     P  +   TP S+     +F   +   KPP       LL  V    LP+   P ++++   +L+F +    V E G   +  W+++ GFF I       L G F ++  F    D A +      VLFRY + T FL    + L+K ++D+M  Y     +D FSV L++   +S+   P  + +   T   G +  RQGL +++  H V P        +  G+    +T ALQ S N    A++L+    L
Sbjct:   29 DARSLEITFMTERLMVVGAPCDGPTDKKRNMVNVHDLAQFLDAQHRGHFMFFNLNALDDATADDGR--------------------------QSVADKLHE----QLLEFNWERDGMKAHTPPLDLIFRICYALDAWLSLDPHHVALVNCQTGKTRSGVVVACYLLFARLADDPTDAFVEFYRKRWDMKS--LTPHALQKKTPPSIQRFLTSFHELLEQQKPPNDKPL--LLKAVIFRQLPVELQPCVQIWDDYKLVFCTDELQVGESGEAPVLDWNEEDGFFAILWENGVELDGGFSILCSFGEDYDNADDVDASSRVLFRYADSTLFLLPGLVTLKKHDLDLMKQYEHGFDEDQFSVDLVL--HESNMRKPRNSVRMDCT---GNSTVRQGLIEITKHHVVLPDPAMHSNFIRMGFCETPTTFALQCSQNAPNVALDLLHSKGL 435          
BLAST of mRNA_P-fluviatile_contig13.1971.1 vs. uniprot
Match: A0A0W8DI85_PHYNI (Phosphatase tensin-type domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DI85_PHYNI)

HSP 1 Score: 162 bits (409), Expect = 1.360e-40
Identity = 110/363 (30.30%), Postives = 174/363 (47.93%), Query Frame = 1
Query:  268 DMTTLDITYITHRLLAIGCPVDGPSNRGANRNNVDDLADWLVNDHRGHFLVWNVS---DSTQDGGRGXXXXXXXXXXXXXXXXXXXXXXXXXAVVSRKLHQRLLGQVLDVPWGSPNRRCYVPSYTHLLRICYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRF----DGEESTALDAYRRVWSKRDPEQYPEQVVLNTPRSLFDLFDNFDCCVRLGKPPRGGXXXGLLVGVGVNGLPLADPPVIEVYGPNELIFSS----VQEGGSEVI--WDDDQGFFKI----NQSLAGDFVLIARFHGTDGAAET--GPEGVLFRYCNHTCFLPQEEIILRKSEVDVMPSYRDQIPDDLFSVSLMI 1299
            D  +L++T++T RL+ +G P DGP+++  N  NVDDLA +L   HRGHF+++N++   D+  D GR                            V+ KLH+    Q+L+  W     + + P    + RICY++  WL LDP+++A V C  GK R+ V++ACYL F    D      ++ YR+ W  +     P  +   TP S+      F   +   KPP       LL  V    LP+   P ++++   +L+F +    + E G   +  W+++ GFF I       L G F ++  F G D  A+       VLFRY + T FL    + L+K ++D+M  Y     +D FSV L++
Sbjct:   29 DARSLELTFMTERLMVVGAPCDGPTDKKRNMVNVDDLAQYLDTQHRGHFMLFNLNALEDAAADDGR--------------------------QSVADKLHE----QLLEFNWERDGMKAHTPPLDLIFRICYALDAWLSLDPQHVALVNCQTGKTRSGVVVACYLLFARLADDPTDAFVEFYRKRWDMKS--LTPHALKKKTPPSIQRFLTGFHELLAQQKPPNAKPL--LLKAVIFRQLPVELQPCVQIWDDYKLVFCTDELQIGENGEAPVLDWNEEDGFFAILWENGIELDGGFSILCSF-GEDYDADDVDASSRVLFRYADSTLFLVPGLVTLKKHDLDLMKQYEHGFDEDQFSVDLVL 356          
BLAST of mRNA_P-fluviatile_contig13.1971.1 vs. uniprot
Match: A0A2P4WX98_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WX98_9STRA)

HSP 1 Score: 164 bits (416), Expect = 6.890e-39
Identity = 126/456 (27.63%), Postives = 204/456 (44.74%), Query Frame = 1
Query:  268 DMTTLDITYITHRLLAIGCPVDGPSNRGANRNNVDDLADWLVNDHRGHFLVWNVSDSTQDGGRGXXXXXXXXXXXXXXXXXXXXXXXXXAVVSRKLHQRLLGQVLDVPWGSPNRRCYVPSYTHLLRICYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFDGEESTALDA----YRRVWSKRDPEQYPEQVVLNTPRSLFDLFDNFDCCVRLGKPPRGGXXXGLLVGVGVNGLPLADPPVIEVYGPNELIFSS--VQEGGSEVI----WDDDQGFFKI----NQSLAGDFVLIARFHGTDGAAET--GPEGVLFRYCNHTCFLPQEEIILRKSEVDVMPSYRDQIPDDLFSVSLMIVPEDSDEADPSFAFQEQQTVKAGIAATRQGLADLSSFHFVTPLLPKLDKLLGQGYPPEASTLALQLSNNDLTAAVELMRETQLRDLMTYRLSEFSP 1587
            D  +L++T++T RL+ +G P DGP+++  N  NV +L+ +L   HR HFL++N++    D                               V+ +LH+    Q+L+  W     + + P    + RICY++  WL LD  N+A + C  GK R+ V++ACYL F        DA    YR+ W  +     P+ +   TP S+      F   +   KPP       LL  V    LP+   P ++++   +L+F +  +Q+G +  +    W+++ GFF I       L G F ++  F G D   +       VLFRY + T FL    + L+K ++D+M  Y     +D FSV L++   ++    P  +     T   G +A RQGL +++  H V P        +  G+    +T ALQ S N    A++L+    L         E SP
Sbjct:   32 DARSLELTFMTERLVVVGAPSDGPTDKKRNVVNVTELSSYLDTQHRSHFLLFNLNALDTD------------------------TPDVQLSVADQLHE----QMLEFNWERDGMKAHTPPLDLIFRICYALVAWLALDAHNVALINCQTGKTRSGVVVACYLLFARLAEDPTDAFVEFYRKRWDMKS--LTPQALQKKTPPSIQRFLSGFHQLLEKHKPPNDKPL--LLKAVIFRQLPVELQPCVQIWDDYKLVFCTDGLQDGETGEMPVLDWNEEDGFFAILWENGVELDGGFSILCSF-GEDYDVDDVDASSRVLFRYADSTLFLLPGLVTLKKHDLDLMKQYEHGFDEDQFSVDLVL--HENSVKKPRNSVPMDYT---GNSAVRQGLIEITKHHVVLPDPAMHSNFIRMGFSETPTTFALQCSQNAPNVALDLLHSKGLSTCFAQESEERSP 449          
BLAST of mRNA_P-fluviatile_contig13.1971.1 vs. uniprot
Match: A0A0P1A795_PLAHL (Formin-homology 2 domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A795_PLAHL)

HSP 1 Score: 164 bits (414), Expect = 1.370e-38
Identity = 125/457 (27.35%), Postives = 207/457 (45.30%), Query Frame = 1
Query:  262 AVDMTTLDITYITHRLLAIGCPVDGPSNRGANRNNVDDLADWLVNDHRGHFLVWNVS--DSTQDGGRGXXXXXXXXXXXXXXXXXXXXXXXXXAVVSRKLHQRLLGQVLDVPWGSPNRRCYVPSYTHLLRICYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRF----DGEESTALDAYRRVWSKRDPEQYPEQVVLNTPRSLFDLFDNFDCCVRLGKPPRGGXXXGLLVGVGVNGLPLADPPVIEVYGPNELIFSSVQEGGSE------VIWDDDQGFFKI----NQSLAGDFVLIARFHGTDGAAET--GPEGVLFRYCNHTCFLPQEEIILRKSEVDVMPSYRDQIPDDLFSVSLMIVPEDSDEADPSFAFQEQQTVKAGIAATRQGLADLSSFHFVTPLLPKLDKLLGQGYPPEASTLALQLSNNDLTAAVELMRETQLRDLMTYRLSE 1578
            A D  +L++T++T RL+ +G P D P+++  N  N DDLA +L   HR H++ ++++  D   D GR                           +V+ KLH+    Q+L+  W     + + P    + RICY++  WL LDP ++A + C  GK R  V++ACYL F    D      ++ YR+ W        P  +   TP S+     +F   ++  KP        LL  V    LP+   P ++++   +L+F S +  G E      + W+++ GFF I       L   F ++  F    G A        VLFRY + T FL    + L+K ++D+M  Y     +D FSV L ++ E S +   +F  ++     +G +AT QGL +++  H V P        +  G+   ++T ALQ S N    A++L+    +  +     +E
Sbjct:   27 APDARSLNLTFMTERLVVVGAPCDTPTDKKRNLVNADDLAQYLETHHRNHYMFFSLNSLDDVDDNGR--------------------------QLVADKLHE----QLLEFNWERDGMKAHTPPLDLIFRICYALNAWLSLDPLHVALISCQTGKTRCGVVVACYLLFAKLADNPTIAFVEFYRKRWDMMS--LTPHALKKKTPPSIQRFLTSFHALLQQ-KPSNDRPL--LLKAVIFRQLPVELQPCVQIWDDYKLVFCSRELQGEEKREAPVLDWNEEDGFFAILWENGIELDSGFTIVCSFGDDYGDAVDVDASSKVLFRYADSTLFLFPGIVTLKKRDLDLMKQYEHGFDEDQFSVDL-VLRESSAQMSRNFFRKDF----SGNSATWQGLVEITKHHVVLPDPAMHSNFVRMGFSETSTTFALQRSQNAPNVALDLLHSKGMSTICAQAAAE 443          
BLAST of mRNA_P-fluviatile_contig13.1971.1 vs. uniprot
Match: A0A425C824_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425C824_9STRA)

HSP 1 Score: 156 bits (395), Expect = 3.530e-36
Identity = 127/456 (27.85%), Postives = 207/456 (45.39%), Query Frame = 1
Query:  223 SEEDEKSSLPVGGAVDMTTLDITYITHRLLAIGCPVDGPSNRGANRNNVDDLADWLVNDHRGHFLVWNVS---DSTQDGGRGXXXXXXXXXXXXXXXXXXXXXXXXXAVVSRKLHQRLLGQVLDVPWGSPNRRCYVPSYTHLLRICYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFDGEESTALDA----YRRVWSKRDPEQYPEQVVLNTPRSLFDLFDNFDCCVRLGKPPRGGXXXGLLVGVGVNGLPLADPPVIEVYGPNELIF--SSVQEGGSEVI----WDDDQGFFKI----NQSLAGDFVLIARF-HGTDGAAETGPEG-VLFRYCNHTCFLPQEEIILRKSEVDVMPSYRDQIPDDLFSVSLMIVPEDSDEADPSFAFQEQQTVKAGIAATRQGLADLSSFHFVTPLLPKLDKLLGQGYPPEASTLALQLSNNDLTAAVELM 1533
            S     SS+P     D+ +L++T++T RL+ +G P DG +N+  N  NV+DL  +L   HR HF+++N++   D+T+    G                           +  KLH+    Q+L+  W     + + P    + RICY++  WL +D +N+A V C  GK R+ V++ACYL F       +DA    YR+ W  +     P  +   TP S+     +F   +   KP        LL  +    LP+   P ++++   +L+F   ++  G S  +    W+++ GFF I       L G F ++  F    D   +      VLFRY + T FL    + L+K ++D+M  Y     DD FSV L ++ E+S +   S          +G +A RQGL +++  H V P        +  G+    +T ALQ S N    A++L+
Sbjct:   30 SSSSSSSSVP-----DICSLNLTFMTKRLVVMGTPSDGITNKKQNVVNVNDLVQYLDTCHRSHFMLFNLNLLEDTTEFQTHGDDQS-----------------------IVDKLHE----QILEFYWERDGMKAHTPPLDLMFRICYALDAWLSIDSKNIALVNCQTGKTRSGVVVACYLLFARLAEDPVDALVEFYRKRWDIKS--LTPHALKKRTPPSIQRFLASFHELLTTHKPRNDKPL--LLKAIIFRQLPVELQPCVQIWDDYKLVFCTDALHVGESREVPVLDWNEEDGFFAILWENGVELDGGFSVLCSFGEEYDNVDDLDASSRVLFRYVDSTLFLLPGLVTLKKHDLDLMKPYEHGFDDDQFSVDL-VLHENSAKMPRSLVHMNF----SGSSAVRQGLVEITKHHVVLPDPSMYSNFIRMGFCETPTTFALQCSQNAPNVALDLL 444          
BLAST of mRNA_P-fluviatile_contig13.1971.1 vs. uniprot
Match: W4FR71_9STRA (Uncharacterized protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FR71_9STRA)

HSP 1 Score: 156 bits (394), Expect = 4.860e-36
Identity = 123/447 (27.52%), Postives = 195/447 (43.62%), Query Frame = 1
Query:  280 LDITYITHRLLAIGCPVDGPSNRGANRNNVDDLADWLVNDHRGHFLVWNVSDSTQDGGRGXXXXXXXXXXXXXXXXXXXXXXXXXAVVSRKLHQRLLGQVLDVPWGSPNR-RCYVPSYTHLLRICYSIKGWLDLDPENMAAVFCANGKARTSVLLACYLRFDGEESTALDAYRRVWSKR--DPEQYPEQVVLNTPRSLFDLFDNFDCCVRLGKPPRGGXXXGLLVGVGVNGLPLADPPVIEVYGPNELIFSSVQEGGSEVI--WDDDQGFFKI----NQSLAGDFVLIARF----HGTDGAAETGPEG---VLFRYCNHTCFLPQEEIILRKSEVDVMPSYRDQIPDDLFSVSLMIVPEDSDEADPSFAFQEQQTVKA---GIAATRQGLADLSSFHFVTPLLPKLDKLLGQGYPPEASTLALQLSNNDLTAAVELMRETQLRDLMT 1563
            LD+TY+T RLL  G  +DGP+++ +  NN  ++  +L   H G ++V+N++D + D                             AV+S         Q LD  W      R Y P   H+ RICY+I  WL LD EN+A ++C NGK R+ V+ ACY  F       + A  + + KR       PE V  + P S+     NF   +     P       +L  +    LP+   P+++++  ++++FSS     S+ +  W+ + GF  I       L G F ++  F     G D    + P+    VLFRY N T FL    + L+K  +D++  Y      D FSV ++      D  DP      + TV     G  A +QG+ +++S H   P        +  G+   AST ALQ + N    A++++    +  + T
Sbjct:   38 LDLTYVTTRLLVSGHAIDGPTDKKSCVNNAGEMKSYLDAAHAGKYVVFNLNDESAD----------------------------TAVISP--------QTLDFSWERDGGIRTYTPPSDHIFRICYAIFAWLALDAENVALLYCHNGKTRSGVICACYFLFVRTVDDPMSALAQFYQKRLGIDTLTPEYVKKSMPISIQRFVSNFSTIMNTQAIPNPEPL--VLKAIMFRALPVEMAPLVQLWDDHKMVFSSASNDSSKPVMDWNPEDGFLAILWETGIPLDGGFTILCSFGDDYDGADNDGSSPPDPASRVLFRYMNSTWFLHSGLVTLQKPMLDMIKQYEHGFDLDNFSVDMVF----HDSLDPP-----KPTVPVDYTGNYAVKQGIVEMASHHTTAPDPSMYINFVKNGFDATASTFALQRAQNAPNVALDILHSEGISTIFT 437          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1971.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT96_ECTSI1.850e-27275.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JR06_9PHAE1.870e-25372.36FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
A0A329RR16_9STRA6.290e-4428.35Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
W2R8I3_PHYPN3.630e-4328.29Uncharacterized protein n=18 Tax=Phytophthora TaxI... [more]
D0P0E1_PHYIT4.940e-4329.60Formin-homology 2 domain-containing protein n=2 Ta... [more]
A0A0W8DI85_PHYNI1.360e-4030.30Phosphatase tensin-type domain-containing protein ... [more]
A0A2P4WX98_9STRA6.890e-3927.63Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A0P1A795_PLAHL1.370e-3827.35Formin-homology 2 domain-containing protein n=1 Ta... [more]
A0A425C824_9STRA3.530e-3627.85Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
W4FR71_9STRA4.860e-3627.52Uncharacterized protein n=12 Tax=Aphanomyces astac... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:3242456..3250827 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score771.9
Seed ortholog evalue2.2e-220
Seed eggNOG ortholog2880.D8LT96
KEGG koko:K18080
EggNOG free text desc.phosphatase
EggNOG OGsCOG2453@1,KOG2283@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009
Hectar predicted targeting categoryother localisation
Exons8
Model size1882
Cds size1878
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1971.1prot_P-fluviatile_contig13.1971.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 3242458..3250827 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815587.2135997-CDS-P-fluviatile_contig13:3242457..32426551622815587.2135997-CDS-P-fluviatile_contig13:3242457..3242655Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3242458..3242655 -
1693562359.101138-CDS-P-fluviatile_contig13:3242457..32426551693562359.101138-CDS-P-fluviatile_contig13:3242457..3242655Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3242458..3242655 -
1622815587.2285593-CDS-P-fluviatile_contig13:3243114..32434071622815587.2285593-CDS-P-fluviatile_contig13:3243114..3243407Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3243115..3243407 -
1693562359.121659-CDS-P-fluviatile_contig13:3243114..32434071693562359.121659-CDS-P-fluviatile_contig13:3243114..3243407Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3243115..3243407 -
1622815587.241607-CDS-P-fluviatile_contig13:3243777..32439311622815587.241607-CDS-P-fluviatile_contig13:3243777..3243931Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3243778..3243931 -
1693562359.1311452-CDS-P-fluviatile_contig13:3243777..32439311693562359.1311452-CDS-P-fluviatile_contig13:3243777..3243931Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3243778..3243931 -
1622815587.254409-CDS-P-fluviatile_contig13:3245423..32456061622815587.254409-CDS-P-fluviatile_contig13:3245423..3245606Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3245424..3245606 -
1693562359.1437054-CDS-P-fluviatile_contig13:3245423..32456061693562359.1437054-CDS-P-fluviatile_contig13:3245423..3245606Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3245424..3245606 -
1622815587.2647004-CDS-P-fluviatile_contig13:3246275..32464881622815587.2647004-CDS-P-fluviatile_contig13:3246275..3246488Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3246276..3246488 -
1693562359.1534212-CDS-P-fluviatile_contig13:3246275..32464881693562359.1534212-CDS-P-fluviatile_contig13:3246275..3246488Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3246276..3246488 -
1622815587.2743478-CDS-P-fluviatile_contig13:3246998..32471721622815587.2743478-CDS-P-fluviatile_contig13:3246998..3247172Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3246999..3247172 -
1693562359.164966-CDS-P-fluviatile_contig13:3246998..32471721693562359.164966-CDS-P-fluviatile_contig13:3246998..3247172Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3246999..3247172 -
1622815587.2848194-CDS-P-fluviatile_contig13:3247711..32480611622815587.2848194-CDS-P-fluviatile_contig13:3247711..3248061Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3247712..3248061 -
1693562359.1766808-CDS-P-fluviatile_contig13:3247711..32480611693562359.1766808-CDS-P-fluviatile_contig13:3247711..3248061Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3247712..3248061 -
1622815587.296206-CDS-P-fluviatile_contig13:3250514..32508271622815587.296206-CDS-P-fluviatile_contig13:3250514..3250827Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3250515..3250827 -
1693562359.187312-CDS-P-fluviatile_contig13:3250514..32508271693562359.187312-CDS-P-fluviatile_contig13:3250514..3250827Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 3250515..3250827 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1971.1

>prot_P-fluviatile_contig13.1971.1 ID=prot_P-fluviatile_contig13.1971.1|Name=mRNA_P-fluviatile_contig13.1971.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=626bp
CPVSTSWGEAGDVSESQDAVHAAGNRICAASSFETSARGKERARETDRDS
GLAPRRRKGMSLWNIFGGGRGRGTSEEDEKSSLPVGGAVDMTTLDITYIT
HRLLAIGCPVDGPSNRGANRNNVDDLADWLVNDHRGHFLVWNVSDSTQDG
GRGGGGGSGRRGGLRRGGGSGSGSDGGGAVVSRKLHQRLLGQVLDVPWGS
PNRRCYVPSYTHLLRICYSIKGWLDLDPENMAAVFCANGKARTSVLLACY
LRFDGEESTALDAYRRVWSKRDPEQYPEQVVLNTPRSLFDLFDNFDCCVR
LGKPPRGGGGGGLLVGVGVNGLPLADPPVIEVYGPNELIFSSVQEGGSEV
IWDDDQGFFKINQSLAGDFVLIARFHGTDGAAETGPEGVLFRYCNHTCFL
PQEEIILRKSEVDVMPSYRDQIPDDLFSVSLMIVPEDSDEADPSFAFQEQ
QTVKAGIAATRQGLADLSSFHFVTPLLPKLDKLLGQGYPPEASTLALQLS
NNDLTAAVELMRETQLRDLMTYRLSEFSPRSMDSGFSPNRGLRSKSISVV
SPGSMLESDHGDLSLEHYDDSQHSRASLGGLASLAGLGGSGGGIGALGVS
NGSLSIRASSGFPRENSGGLSSSSAA
back to top

mRNA from alignment at P-fluviatile_contig13:3242456..3250827-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1971.1 ID=mRNA_P-fluviatile_contig13.1971.1|Name=mRNA_P-fluviatile_contig13.1971.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8372bp|location=Sequence derived from alignment at P-fluviatile_contig13:3242456..3250827- (Porterinema fluviatile SAG_2381)
TGCCCCGTCTCTACCTCCTGGGGTGAGGCTGGTGATGTGTCGGAGTCTCA AGACGCTGTTCACGCCGCAGGAAACCGAATTTGCGCTGCGTCAAGCTTTG AAACAAGCGCACGAGGGAAAGAGAGAGCGCGAGAGACCGACCGCGACAGC GGTCTAGCACCTCGCCGACGCAAGGGTATGAGCCTCTGGAATATCTTCGG TGGTGGAAGGGGGAGAGGAACCAGCGAGGAGGATGAAAAATCCTCGTTGC CCGTGGGCGGGGCGGTGGACATGACAACGCTGGACATTACGTACATTACG CATCGTTTGCTTGGTGAGTGTGTGCCCTTCACAAATACACACAAAATGTA TTCCCCGCCTCTCCCACATTGCTGCGATAGATGTCATATAGTTTGCCTTT CACAGGCCTGTCTTGGTTGCCGTGGCTAAACGACACATTTGTTCAAGCAG ACCGTTATCCTCCCCTGGAGATAATATGCACATAGACGCGATTATCCCCC CAACACAAAACGTAGTCTCCGAAGAACGGACCCGTTTTTTGTCGTTCCCT TTTTTTTCCAACTCCACACCCTTCTCAAAGCAACTGTCGTTCGAAGCATC TAACTGGCTCTTCCGGGAGGTTTGTGCTTCGTATCACCGACCCGGCACAC GCTCCAAACCTCTTATCTTTCAGGAGAAAATTCATACGCTTTCCGCCCGC TCCGGCGTGGGTGTACCGACTACAACCGCTGATTTGCCGGCGTGTTTGCT GGAAACCTCGCTCGTGCGAGCACTGAAAAAACGAAAAAGAGCCGAGTAAG AAGCAGTGCTATCCGCTCGGCAGCCATTTATGTGCAAGCAGACAGCGGAG GTGATTGCCTGGTGTTCCTTCTTTCCACCATTTTTTTAACTCTGAACCAT CGGATCGTCGAAGGAGAGAGACGATACGGGCGGTCGAGCCAAGCCAGATA ACAGTCCGGTTTGGCTGACTTTGAATGACCCCTTGATGGTGCCCCTCCAC AAGCAACCTCCAGTCGGCGTACAGCCTAGGGAGTACCTGTTGCTGTTGTT ATTATTGCTACGCTATCGGTCACAGCAGTGCAGTGTTGTAGTTGTTTTGT TGTTGCTACGCTATGGGTTACAGTAGTGCAGCGTGGCTCTCGACTGCTGT CCACAGGTGATGGTACTCAAGCCTTGGTGTCCTGCGGGTTCGCCGTTCGA CGGTTTGTTCCTTGACTACTCCCCAGGAGCTTGTACCCCTGGCGCTACGG CAGTTGACCAACCCCCAGTACCCCTCAAGGAACAAATTTAAGATCGCCTG AAGTAGCACGTCGTTTCTGCTGCGCTGCTGTGTGTGGTGGGCGTCTTTCG CTGGGAGACATGTTGACACAGCGGGAGTGGGATGATGAAGATCTGCAACA CGTTCCTCAGGCATTCGGGGGGTGGGGGGAGGCGGTGCAATGCTCTTGGT AATTTCTTCTGAGGGTAGACAAATGGCGTTTGCATCCTCACTGGTCGAAT GGGTCCACAGCTTTCTCGTCTCGCAGAGGGGCACACAAGAAGTTCCCTTG GACACAAACGCTCTTGTTGCGTCTTAGTCTAAGGCGTCCATTTGAGTGGC GCACACAGTCAGGTCTCTCTCTGGTTTCCGAACCGCTCACGGTTCTTTCC GACCCTAGGTTACGGTTGAACCTTGCGGGAGCGAGCTCTCGCCGCGCGGT CTGCACAGGCTGAAGGATAGCTCGCCATAGACCACCTCCAGTGTTCATAA TTGCCTGTGGTTTGTCTTTCCGGCTTTTTTGTCAGTTGTCGTTCGGTAAT CGGAGCTGCTGCGCCCCCGCAGCTCCTCCACAAATGTGTAATCGTTTGAC GCTGTCAACAAATCAAATTTTATCGACCTCTGAAAACGTATTTCTTGACT AAAGGGAGGGCAAGTCGGGCACGCCGCGTTTGTTTCTTGGGTGAAAAGGC ACGAGTGGGCGTTGCAGGAACCCACCAGGGAGTTTTGACCACCCGAATGT CCCCCTGGATAAATATGTCGGCTGCAATGAATGAATTTTCTGCTTCATCC TCCCCCGCTCCGCTCCCCCCCACCGACGCTCTCGAAAGCGACGCACCGGC CCCATGGTGCGACAAGGGATTGGGTTGACGCAGGGTTGGCGGCGGCGCTG TAACACATGTTGCCTGCGTGAGTGAGGGCAACCAAGTTCCCTCTTTTCAT TTTCTCGTTTTTGGGGGGCGGAAACCATGATTGTGGTCGAGTAAAACCAT ACGGGGAGGAGAATCAAACTCCGCACATGCGGTATGGTCGCACTACCCAG TCATGACATGGTGATACCTCCGTGAGGTACTGCCGTAGTACATTTCAGTG GCTGTCCCTAAGATGATACCAAACAAGGAATTGCAGCTCGAATATGGCTG TCACCCGTGTGCAAGATCCGGAAGCCGTTGGTGGAAGATTCTGAGAAGGA TGCTGCCCACCCTTCATTCCACTCGCCGAATGCATCACGGCACTTCACGC TTGGAAAATGAAAGAGCTTGGACCGGTGAAAACCCGGCTCGTCGCTCCGT CCAGGCCTAGTAGGGATGCGAGGTTTGTGGGCTACCGGCTATGGCACGTG TGAATTGAACATCTGCCCTCTTCCTCGCCGCCTCCTCAAAACCTGTACGC CCCGCAACCCGTGAACCGCACACACCCGTTGTTTGAATTAAATGAAAAAG TAACATTGGACGAAACATGACGCAACAAATCCCCGGTGAATTCAACATTC CTCGTCTCCCGCGCAGCGATCGGCTGCCCTGTGGACGGCCCTAGCAACCG CGGCGCGAACCGAAACAACGTGGACGATCTCGCCGACTGGCTGGTGAACG ACCACCGGGGTCACTTCCTCGTCTGGAATGTCTCGGACAGCACCCAGGAT GGTGGCAGGGGCGGCGGCGGCGGTAGCGGCCGGAGGGGCGGACTGAGAAG AGGCGGCGGCTCTGGTAGTGGGTCGGATGGAGGGGGAGCCGTGGTGTCCC GGAAGCTGCACCAGCGTCTGCTGGGGCAGGTGCTGGATGTGCCGTGGGGC AGCCCCAATCGCCGGTGCTACGTGCCGTCGTACACACATCTCTTGAGAAT ATGCTACTCGATCAAGGTGAGGAAGCACCGAAGTCCGGCGGCTGGAATGG GGTGGGTGAAAAGTTGCGGCGGCGGGTTTGGGGGTGGGTGGGTTGGGAGG TGGCGTTGCGAGATAGCTTTTGGCTGCCATGTATTGCCGGGTGGGCGGCT TGAGTAGATCTGTCGTCGAGGCGGCCGAAGAGGTAGTGCCCGTACTCTCT CTTTTGTAGGCTTCATCTGCCCAACCGCTCCTGGCACAAACACGACGCCC GCAGCGTTGCCGGAAACTGTTTTTTCGACTCCACTCATTCTCTCGATGCG ATTCAAGAAAAACTAATGTGCGTAATTTCAAGACGACTCTTGGTGATTCC TCGACGGCTTTTGAAAATCACGGGCTTGCGAGTCATCGACGTGATTGTTG GAGGACTTGGTTGAATTTCGCGAATTGTCCTCCACCGTGAACATCCTACC TTCCCACCGTCCCCCCGGTCGCCGCGGTCGCCTTCGCCGTCGCCGCCGCC GCCCCCTGCGGCAATCCCTTCAACAATCCGCACCCCCCGAACAATGTCAC GGCAGGGCTGGCTCGACCTCGACCCCGAGAACATGGCGGCCGTATTCTGT GCCAACGGAAAGGCGCGCACGTCTGTGCTTCTTGCTTGTTATCTGCGGTT CGACGGGGAGGAGTCCACGGCGCTGGATGCCTACCGGCGGGTGTGGTCGA AGCGGGATCCGGAGCAATACCCGGAACAGGCAAGCGTTCCCTGACTCACG ATGAAGTTATGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGTTG TTGTTGTTGTTGTTGTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT TGTTGTTGTTTTTGGTGGTAGTGGTGGTGGTGGTGTGGTGGTGGTAGGGT GGCTTTTGTTGTTGTTGTCGTTGTTACTTTCACATTGAAAACATTTCCGA TCACTTCTTTTTTTTTACTCAGACATGTTTGTGTGTCCTCTTCAAACGCC AACGCTGGTCTTCTCGGGCCTATGTAGTGATTTTTTTGTTAAAACGTTTG CCATGGTCCACAAGCCGGTAACACGATGCCCTCACACCACGCCACCACAC CGCTCGTTTCCGCTTTCACGTGCCGGCTCTCTTCCTGCTCCTCCTGTACC TATTCTTCGCCCTTGCTGCTTGTCAAACCCGAATCCGTCCGTCACACGTC GCCCCCCCCTGCCCCTCTTGGATCCCGTTCGCTGTGTAGGTTGTTCTCAA CACGCCTCGCAGCCTTTTCGATCTCTTCGACAACTTCGACTGCTGCGTGC GCCTGGGCAAGCCGCCGCGGGGAGGTGGCGGGGGCGGACTGTTGGTGGGC GTGGGCGTGAACGGCCTCCCGCTGGCGGACCCCCCAGTGATCGAGGTGTA CGGCCCGAACGAGCTGATCTTCTCGAGCGTGCAGGAAGGGGGCAGCGAAG TGGTGAGGACGGCGGGCCAGGAGTTGTTTTTCGGGTTGTTCGCTCTGTTC GCAAGGACAAGTCAAGAATTCGAATCGTTAGCCTGGAATGGTGCGATGTA GTGGTTGGCAGCCGCAGGCTGGTGGTGCGTGCGCATTGTTTTTGGAAAGC GTTTGTGTTTGTTGCGGGTGGCTTATTTTGCGAATGGTGTCCGTTGCTCC GAGAAGCTAGTCTCAGTCGGCGACTCTGGAGCTCGCATGATTTCTTCCTC GTGAAAAGTTTTACTGGAGCCTAATTGTCGCGACTCCGAACGGCAGGCGA AACTTCATAGATGGAGAGCGACAAATATTCGATCGGACACTCGTCAGCAA TATCGGTAATCGCTTTGTTTATTGCATCCAAAAATAGCGCGTTCAGAACG TATCTGTCATGTAGGAATCACCAGCGCCCCCCCTTTTTCTTCAGATTGAC TTCGTTGGTATGCTCTCTATTTTCCGCAGCTCTCTGCCCCGCCTTTCATC GTGCACCACTGGTCCCTCCTCCCGCAGCAGCACTCGCGATACTGACCCTA TCGTTGTCCCTAGCTCACGCCCCACCGGTCCTGCCGCCGGTGCGCTGTAT TCGCCCTCTTGCGTCGTTGCGGTGACACATTGAAACGGGGGTGATTGGGT CGGATGTGCGGGGGATCAAAGATATGGGATGACGACCAGGGCTTCTTCAA AATCAACCAGTCGCTTGCTGGGGATTTCGTGTTGATCGCGCGGTTTCACG GGACGGACGGCGCCGCAGAGACGGGGCCGGAGGGGGTGCTGTTCCGCTAC TGCAACCACACGTGCTTCCTACCGCAGGAGGAGATCATTCTCCGGAAGTC AGAGGTACGCGGCGCTGCAGTTGCGGTCGGCAGACGAGGAGGCAGGGCCG CAGGGGGACGGCGTGGGGCTCGGGGTCGGGAAAGGATGGGGTGAGGTGGG AGACCGAGTCGGAAGGAGCGTCAGCGCGGGAATAGTGAGGCGCCCGCCGT CGATGTACCCAAGGGGCCTGTCAAGGTTGTGTTGTCCTCCCGTAGCCCCG TTCCCGCCCTCTGCTTGACGAACGGGCGAGACCCTAGGATATCTGAGTTC CAGGTATCGACACTGCTCGAACCAAGAGTTGGGTCATCTCCTGAGGTTCG GAAATTCTTACAGCGGGGGAATATGAAGTGTGTCCTTGCTCTCCTCTGCG AGAATCGCTCTCTGTACGGAGAAACCCTTTCGACCACCCTTCGGGCCGTT TTCAACGAGAAGGAGAAATCTCCGATTTCTCGGGATTATATCCCGAGAAT CCGGAATGTAAAAGCGTGTCGTTCTGAACGGATGAACATTATTTTTTTGT GCCGACTTCAGTGCTCTCTGGGAATCGCTCTCAGTTACGCACAGGTAAGG CCGCGGTCGCAACCACAGCTCAGCCCGCTGTGCAGCTTCTTGGACATGGT GCAGGTGTTGGAGAGGCTCTCATCGAACATTTTCCTTAGAAGCAGTCGTT GGGCAACTCGCAGCAGTACTGTTGCCTACAACTCATATTTTGTCCGGCAG CCCGCGTCTATGGCGCCGCGCGCTTCGTCAGGCTGCTGTAAGTTCACTAG GCGCTTTCTGCTCACACACTGCTGACAAGCGCGAGATCCTCGACACTTCG TTGGACACTTCCTTGAACAGCACGCCGCGTGGTACTCCTTACCGGCCCCA TCTGTACCTTATTCTCCGATTTGTTTCGGAACACCGAAAAGTCGGAGAAG CTCAACAACATCAACCCCGCTGGTTTTCTGGAAAAGCGGAGAAACTGTCC CGGGTTTTCTCAGGAAAATCGGAGAAATCGGAGAAGTTTAGAGCGACCTT TTAAGGGTGCAAACCCGCAATTCCCAACGTTCAGCCTGCGTGGTGCCCCT GTCGAATCCCACTCAGTTCCGGAGCACGTGCGAGCATATTTTTTTATGTC GGGTGTAGCCAGGCCACGCGACAGAGGGGTTTGGCAGGAGTTTCGCATCT GTTTTCGTGCCCCGAATGCGGGCTGCTCTATGCAAGCCCTACGCAAACTT ATTTCGCAGGAGGCGGGCAATTCGGGCTAAGATCGTATCGCGCTGCCCTC CCATTCCTCACTCACAAGAGCCGCGTCCTCCGCGCGGTGCGCGCATCAAG ATCACCAGGCGGCTGCACGAAATATTGACACCCTGGTGCACGTACCCGTA ACCGTCCCCGTCCCCCCGTCCCCGGCCCCGGCCCCCCTCCGACCGCTTTT GCTCTCTGACTACTCACGGCCCCCCGCGAACGACTGTCGCACGCATGGCA TGCCTCGCACGCGCCCTCGACATCTTCGTTTTTCTCTCCGTCGAAGGTGG ACGTGATGCCGAGCTACAGGGACCAGATACCGGACGACCTGTTCAGCGTG TCCTTGATGATCGTGCCCGAAGATTCGGACGAGGCCGACCCGAGCTTTGC GTTCCAGGAGCAGCAAACAGTCAAAGCTGGGATTGCGGCGACCCGCCAAG GTAGACACGGGGTTAAGGGCGGAAGCGAGGGCAAGGGGTAGGGGCAGGCG GGGCCTTCTTTTATGGGAGGGGGGAGGGTTGGAGGCGTTTTCTATGTCTC TCATGTCTAGGCTCGTAAACATTTTTCTTCCCAGGATATCTAGCCTGGCT GCTTTGCAATCCTGTCGCTCCGTAGATCGGCACGGGACGTGGAGGTCTGA AGGCGAATTTCCACGAAAGCCTCCTCAGCCCGTTGCCCCGGTCCGTGGCC GGCCTTGGTCTATTTAGCCGTGCCCCACCTCGTAAGGGTATAAGTGGTTT GCCGCCGAGTATCCTCCGCCTCACCTTCTTCCCCCTACTTTTTGCCCCTT CGTCGGGGGTTGGGTTCCAGGCCTCGCGGACCTCAGCTCGTTCCACTTCG TGACTCCCCTGCTGCCCAAGCTGGACAAGCTCCTGGGGCAGGGCTACCCC CCCGAGGCGTCGACACTAGCTCTTCAGCTTTCCAACAACGACCTGACCGC CGCGGTAGAGCTCATGAGAGAAACCCAGCTGAGGGATCTCATGACCTACC GCCTCAGTGAATTCTCGCCGCGGTCGATGGATTCGGGGTTTTCCCCGAAT CGAGGGCTGAGGTCCAAATCCATTTCGGTGGTGTCCCCGGGGTCCATGCT CGAGTCAGACCATGTGAGTGAGCGCTTTTTGTCGTGGCCGTGGCGTTGGT CCTCCTCTTCGTGATCGTCGTCGTAATCGTCGTCGTCGTCGTAGCAGACG GCGGAATGATCACACGCAGAGATTGCTGTAGCAGCAGAAGGTGTCACGCG GCCTGCATTCAGGAGGTACCCTGCTCACGACGTGTCACGTTCGACTCGTT TCGCTCGTGGCAAGGCTCCCACGGTGTGTGTGCCTGTGCGTTTGTGTTGG CTGCATCGCCTGCGGAACACGGCCATGCCTCATCGGGTGTGGTATCTTGT GTTGTTGTCTTTTGAGGGGCCGTCATCCCTTCCTTCCATTGCCTTCTGCT TCACCACCGCACCTACCGCTGCGGACACGGATGATTGAAAACAACGCCAT GACGGCCTGCTGCTTCTGCCGCTACTACTAATGCTGCTGCTGCTGCTGCT GCTGCTGCTACTGCTGCTGCAGGGAGACCTCTCTCTCGAACACTACGACG ATTCTCAGCACAGCAGGGCGTCGCTCGGCGGCCTGGCGAGCCTGGCCGGC CTCGGCGGCAGCGGCGGCGGGATCGGGGCGCTGGGCGTCTCGAACGGCAG CCTGTCCATCAGAGCGTCCTCCGGTTTCCCTCGGGAGAATTCGGGTGGCT TATCCAGCAGCAGTGCCGCGCC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig13:3242456..3250827-

>mRNA_P-fluviatile_contig13.1971.1 ID=mRNA_P-fluviatile_contig13.1971.1|Name=mRNA_P-fluviatile_contig13.1971.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3756bp|location=Sequence derived from alignment at P-fluviatile_contig13:3242456..3250827- (Porterinema fluviatile SAG_2381)
TGCCCCGTCTCTACCTCCTGGGGTGAGGCTGGTGATGTGTCGGAGTCTCA
AGACGCTGTTCACGCCGCAGGAAACCGAATTTGCGCTGCGTCAAGCTTTG
AAACAAGCGCACGAGGGAAAGAGAGAGCGCGAGAGACCGACCGCGACAGC
GGTCTAGCACCTCGCCGACGCAAGGGTATGAGCCTCTGGAATATCTTCGG
TGGTGGAAGGGGGAGAGGAACCAGCGAGGAGGATGAAAAATCCTCGTTGC
CCGTGGGCGGGGCGGTGGACATGACAACGCTGGACATTACGTACATTACG
CATCGTTTGCTTGTGCCCCGTCTCTACCTCCTGGGGTGAGGCTGGTGATG
TGTCGGAGTCTCAAGACGCTGTTCACGCCGCAGGAAACCGAATTTGCGCT
GCGTCAAGCTTTGAAACAAGCGCACGAGGGAAAGAGAGAGCGCGAGAGAC
CGACCGCGACAGCGGTCTAGCACCTCGCCGACGCAAGGGTATGAGCCTCT
GGAATATCTTCGGTGGTGGAAGGGGGAGAGGAACCAGCGAGGAGGATGAA
AAATCCTCGTTGCCCGTGGGCGGGGCGGTGGACATGACAACGCTGGACAT
TACGTACATTACGCATCGTTTGCTTGCGATCGGCTGCCCTGTGGACGGCC
CTAGCAACCGCGGCGCGAACCGAAACAACGTGGACGATCTCGCCGACTGG
CTGGTGAACGACCACCGGGGTCACTTCCTCGTCTGGAATGTCTCGGACAG
CACCCAGGATGGTGGCAGGGGCGGCGGCGGCGGTAGCGGCCGGAGGGGCG
GACTGAGAAGAGGCGGCGGCTCTGGTAGTGGGTCGGATGGAGGGGGAGCC
GTGGTGTCCCGGAAGCTGCACCAGCGTCTGCTGGGGCAGGTGCTGGATGT
GCCGTGGGGCAGCCCCAATCGCCGGTGCTACGTGCCGTCGTACACACATC
TCTTGAGAATATGCTACTCGATCAAGCGATCGGCTGCCCTGTGGACGGCC
CTAGCAACCGCGGCGCGAACCGAAACAACGTGGACGATCTCGCCGACTGG
CTGGTGAACGACCACCGGGGTCACTTCCTCGTCTGGAATGTCTCGGACAG
CACCCAGGATGGTGGCAGGGGCGGCGGCGGCGGTAGCGGCCGGAGGGGCG
GACTGAGAAGAGGCGGCGGCTCTGGTAGTGGGTCGGATGGAGGGGGAGCC
GTGGTGTCCCGGAAGCTGCACCAGCGTCTGCTGGGGCAGGTGCTGGATGT
GCCGTGGGGCAGCCCCAATCGCCGGTGCTACGTGCCGTCGTACACACATC
TCTTGAGAATATGCTACTCGATCAAGGGCTGGCTCGACCTCGACCCCGAG
AACATGGCGGCCGTATTCTGTGCCAACGGAAAGGCGCGCACGTCTGTGCT
TCTTGCTTGTTATCTGCGGTTCGACGGGGAGGAGTCCACGGCGCTGGATG
CCTACCGGCGGGTGTGGTCGAAGCGGGATCCGGAGCAATACCCGGAACAG
GGCTGGCTCGACCTCGACCCCGAGAACATGGCGGCCGTATTCTGTGCCAA
CGGAAAGGCGCGCACGTCTGTGCTTCTTGCTTGTTATCTGCGGTTCGACG
GGGAGGAGTCCACGGCGCTGGATGCCTACCGGCGGGTGTGGTCGAAGCGG
GATCCGGAGCAATACCCGGAACAGGTTGTTCTCAACACGCCTCGCAGCCT
TTTCGATCTCTTCGACAACTTCGACTGCTGCGTGCGCCTGGGCAAGCCGC
CGCGGGGAGGTGGCGGGGGCGGACTGTTGGTGGGCGTGGGCGTGAACGGC
CTCCCGCTGGCGGACCCCCCAGTGATCGAGGTGTACGGCCCGAACGAGCT
GATCTTCTCGAGCGTGCAGGAAGGGGGCAGCGAAGTGGTTGTTCTCAACA
CGCCTCGCAGCCTTTTCGATCTCTTCGACAACTTCGACTGCTGCGTGCGC
CTGGGCAAGCCGCCGCGGGGAGGTGGCGGGGGCGGACTGTTGGTGGGCGT
GGGCGTGAACGGCCTCCCGCTGGCGGACCCCCCAGTGATCGAGGTGTACG
GCCCGAACGAGCTGATCTTCTCGAGCGTGCAGGAAGGGGGCAGCGAAGTG
ATATGGGATGACGACCAGGGCTTCTTCAAAATCAACCAGTCGCTTGCTGG
GGATTTCGTGTTGATCGCGCGGTTTCACGGGACGGACGGCGCCGCAGAGA
CGGGGCCGGAGGGGGTGCTGTTCCGCTACTGCAACCACACGTGCTTCCTA
CCGCAGGAGGAGATCATTCTCCGGAAGTCAGAGATATGGGATGACGACCA
GGGCTTCTTCAAAATCAACCAGTCGCTTGCTGGGGATTTCGTGTTGATCG
CGCGGTTTCACGGGACGGACGGCGCCGCAGAGACGGGGCCGGAGGGGGTG
CTGTTCCGCTACTGCAACCACACGTGCTTCCTACCGCAGGAGGAGATCAT
TCTCCGGAAGTCAGAGGTGGACGTGATGCCGAGCTACAGGGACCAGATAC
CGGACGACCTGTTCAGCGTGTCCTTGATGATCGTGCCCGAAGATTCGGAC
GAGGCCGACCCGAGCTTTGCGTTCCAGGAGCAGCAAACAGTCAAAGCTGG
GATTGCGGCGACCCGCCAAGGTGGACGTGATGCCGAGCTACAGGGACCAG
ATACCGGACGACCTGTTCAGCGTGTCCTTGATGATCGTGCCCGAAGATTC
GGACGAGGCCGACCCGAGCTTTGCGTTCCAGGAGCAGCAAACAGTCAAAG
CTGGGATTGCGGCGACCCGCCAAGGCCTCGCGGACCTCAGCTCGTTCCAC
TTCGTGACTCCCCTGCTGCCCAAGCTGGACAAGCTCCTGGGGCAGGGCTA
CCCCCCCGAGGCGTCGACACTAGCTCTTCAGCTTTCCAACAACGACCTGA
CCGCCGCGGTAGAGCTCATGAGAGAAACCCAGCTGAGGGATCTCATGACC
TACCGCCTCAGTGAATTCTCGCCGCGGTCGATGGATTCGGGGTTTTCCCC
GAATCGAGGGCTGAGGTCCAAATCCATTTCGGTGGTGTCCCCGGGGTCCA
TGCTCGAGTCAGACCATGCCTCGCGGACCTCAGCTCGTTCCACTTCGTGA
CTCCCCTGCTGCCCAAGCTGGACAAGCTCCTGGGGCAGGGCTACCCCCCC
GAGGCGTCGACACTAGCTCTTCAGCTTTCCAACAACGACCTGACCGCCGC
GGTAGAGCTCATGAGAGAAACCCAGCTGAGGGATCTCATGACCTACCGCC
TCAGTGAATTCTCGCCGCGGTCGATGGATTCGGGGTTTTCCCCGAATCGA
GGGCTGAGGTCCAAATCCATTTCGGTGGTGTCCCCGGGGTCCATGCTCGA
GTCAGACCATGGAGACCTCTCTCTCGAACACTACGACGATTCTCAGCACA
GCAGGGCGTCGCTCGGCGGCCTGGCGAGCCTGGCCGGCCTCGGCGGCAGC
GGCGGCGGGATCGGGGCGCTGGGCGTCTCGAACGGCAGCCTGTCCATCAG
AGCGTCCTCCGGTTTCCCTCGGGAGAATTCGGGTGGCTTATCCAGCAGCA
GTGCCGCGGGAGACCTCTCTCTCGAACACTACGACGATTCTCAGCACAGC
AGGGCGTCGCTCGGCGGCCTGGCGAGCCTGGCCGGCCTCGGCGGCAGCGG
CGGCGGGATCGGGGCGCTGGGCGTCTCGAACGGCAGCCTGTCCATCAGAG
CGTCCTCCGGTTTCCCTCGGGAGAATTCGGGTGGCTTATCCAGCAGCAGT
GCCGCG
back to top