mRNA_P-fluviatile_contig13.1930.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1930.1
Unique NamemRNA_P-fluviatile_contig13.1930.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig13.1930.1 vs. uniprot
Match: A0A6H5KEX8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEX8_9PHAE)

HSP 1 Score: 389 bits (998), Expect = 4.140e-128
Identity = 199/289 (68.86%), Postives = 226/289 (78.20%), Query Frame = 1
Query:  160 QRLLRMSANPKVVCLDCTGTIMQIKGSIPRLYLGALEDRLGVSEGELPDEVSESGLMESFKSSLNRRSMELPCFGAGVVSSEEWWAEVVRATFSGAGISAETLGI----DKGGGG----------IFTDVFQCLYHDIFTSTRAWELVPGAEEVIEDLRKWCQEPDGPLALGAMSNFDERLHPLLKNLGVHDSFDFVLTSRECSSEKPDPGMFLEALKRVGA----EGRDRGVIVGDTFRTDVLGARSVGWDAVLVTKEKASSAEEDSTGFDYSRVDSIGAVPAALGIG 972
            +RLL M A P VVCLDCTGTIM+IKGS+PRLYLG LEDRLGVSEG LPD+VSE  L+ SF++SL RRS ELPCFG GV+SSE+WWAEVV ATF GAG+S ETLGI    D+GGG           +F DVF  L+HD+FTST AWELVPGAEEV+EDLR W  E  GP ALGA+SNFDERLHPLLKNLGV++SFDFVLTSREC SEKP+P MF EALKR G+    +G  RGVIVGDTFRTDVLGARSVGWDAVL+T+ K  + EE+     Y+RVD +  VPAALG G
Sbjct:   28 RRLLTMRAGPDVVCLDCTGTIMRIKGSMPRLYLGVLEDRLGVSEGGLPDKVSEQDLLNSFRASLKRRSKELPCFGTGVMSSEDWWAEVVMATFRGAGVSDETLGISQEGDRGGGXXXXXXXXXGRVFDDVFDRLFHDVFTSTTAWELVPGAEEVLEDLRAWVGEAGGPRALGAVSNFDERLHPLLKNLGVYESFDFVLTSRECGSEKPEPHMFHEALKRAGSSGGGDGDGRGVIVGDTFRTDVLGARSVGWDAVLITRGKDPATEEEQDTTHYARVDDLRGVPAALGRG 316          
BLAST of mRNA_P-fluviatile_contig13.1930.1 vs. uniprot
Match: A0A8J5XU42_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XU42_DIALT)

HSP 1 Score: 157 bits (397), Expect = 2.130e-39
Identity = 102/283 (36.04%), Postives = 143/283 (50.53%), Query Frame = 1
Query:  178 SANPKVVCLDCTGTIMQIKGSIPRLYLGALEDRLGVSEGELPDEVSESGLM----------ESFKSSLNRRSMELPCFGAGVVSSEEWWAEVVRATFSGAGISAETLGIDKGGGGIFTDVFQCLYHDIFTSTRAWELVPGAEEVIEDLRKW-CQEPDGPLALGAMSNFDERLHPLLKNLGVHDSFDFVLTSRECSSEKPDPGMFLEALKRVGAEGRDRG----VIVGDTFRTDVLGARSVGWDAVLVTKEKA-----SSAEEDSTGFDYSRVDSIGAVPAALG 966
            +  P++V  D TGT+M+++  +  +Y  AL   L  S+     ++S + L            +F  +   +    PCFGAG +SS +WW+ VVR  F GAG+S   +  +         +F  LY   F ST  WEL+  +  V++ L +W  Q P G L +G +SNFD+RL  LL +LG+   FDFVLTSRE   EKP   +F  A +R G    D      V VGDTF TDVLGA   GW AV V  + A       A       ++ R+ S+G VP  +G
Sbjct:    7 ATRPRLVTFDATGTLMRVQRPVGAIYRDALISSLSASKLARTADLSAAELAACNVDPVAIGRAFGRAYAAQCAAHPCFGAGSLSSRDWWSSVVREAFVGAGVSEAVVRAEM------PLLFPTLYES-FASTATWELLDASAGVVQQLARWRAQLPPGELTIGVISNFDDRLPALLNSLGLGRYFDFVLTSREHGDEKPCRSIFERASERAGLATVDVSPRTCVHVGDTFGTDVLGASRAGWRAVFVASDDALGELMPEAFVAMAETEHERIPSLGFVPRIVG 282          
BLAST of mRNA_P-fluviatile_contig13.1930.1 vs. uniprot
Match: A0A7S2STH1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STH1_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.260e-38
Identity = 98/260 (37.69%), Postives = 135/260 (51.92%), Query Frame = 1
Query:  187 PKVVCLDCTGTIMQIKGSIPRLYLGALEDRLGVSEGELPDEVSESGLMESFKSSLNRRSMELPCFGAGV-VSSEEWWAEVVRATFSGAGISAETLGIDKGGGGIFTDVFQCLYHDIFTSTRAWELVPGAEEVIEDL--RKWCQEPDGPLALGAMSNFDERLHPLLKNLGVHDSFDFVLTSRECSSEKPDPGMFLEALKRVGAEGRDRGVIVGDTFRTDVLGARSVGWDAVLVTKE--KASSAEEDSTGFDYSRVDSIGAV 951
            P+VV  D TGT+MQ+   +   Y  AL    G+    LP   S      +FK     +S E PCFG G  + S +WW  VVR T+   G+  + L  D     +  ++F  LY ++F  +  WEL   A  V++ L   K  +  D PL LG +SNFDERLH LL NLG+   FD VLTS+EC  EKP+  +F  AL R+G   R R V +GDTF  DV GA   GW+A+ V     +  + ++     ++ RV  +  V
Sbjct:  101 PRVVTFDATGTLMQLTEPVGMHYREALLQASGL---RLP---SPDHFDAAFKEVYKAQSEEFPCFGCGAAMPSRDWWYPVVRDTYLKTGVPEKIL--DP----LLPEIFDSLYDNVFAGSEGWELNEQAIYVLDTLIELKESRAEDDPLYLGVISNFDERLHKLLDNLGIAHYFDIVLTSKECCVEKPNSPIFDMALSRLGIYDRSRAVHIGDTFDKDVAGAARAGWNAIFVRAPPYRMKNVDDLPCDIEFQRVGDLSHV 348          
BLAST of mRNA_P-fluviatile_contig13.1930.1 vs. uniprot
Match: A0A7S2PCP1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCP1_9STRA)

HSP 1 Score: 142 bits (357), Expect = 2.820e-33
Identity = 83/231 (35.93%), Postives = 125/231 (54.11%), Query Frame = 1
Query:  187 PKVVCLDCTGTIMQIKGSIPRLYLGALEDRLGVSEGELPDEVSESGLMESFKSSLNRRSMELPCFGAGV-VSSEEWWAEVVRATFSGAGISAETLGI-DKGGGGIFTDVFQCLYHDIFTSTRAWELVPGAEEVIEDLRKWCQEPDGPLALGAMSNFDERLHPLLKNLGVHDSFDFVLTSRECSSEKPDPGMFLEALKRVGAEGRDRGVIVGDTFRTDVLGARSVGWDAVLV 873
            P+++  D T T++Q+K  +   Y   L +        LP   + +    +F  +    + + PCFG G+ ++S EWWAE  + T++         G+ D+  G +   V + LY+ +F ST AWEL PG  + +   + W +E  GP  L  +SNFDERLH +L  +GV D+FDFVLTSRE  SEKP+   F  A+ R G       + VGD F +DV+GA + GW +V +
Sbjct:   89 PQLITFDATDTLIQLKSEVGMTYRLILHEATRF-RSRLP---TPAVFTSAFNQAFTETNEKYPCFGCGLGMTSREWWAECTKRTYALVEHIDYERGLRDRMDGPLGDAVAEVLYNQVFASTEAWELKPGVLDALSRFKMWREE-GGP-QLAVLSNFDERLHSILDQVGVADAFDFVLTSREIGSEKPNRSAFEVAMSRAGVADPSLCMHVGDGFDSDVVGASNAGWHSVWI 313          
BLAST of mRNA_P-fluviatile_contig13.1930.1 vs. uniprot
Match: L8GZ50_ACACA (HAD hydrolase, REG2-like, family IA subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZ50_ACACA)

HSP 1 Score: 123 bits (309), Expect = 5.630e-28
Identity = 88/268 (32.84%), Postives = 132/268 (49.25%), Query Frame = 1
Query:  175 MSANPKVVCLDCTGTIMQIKGSIPRLYLGALEDRLGVSEGELPDEVSESGLMESFKSSLNRRSMELPCFGAGV-VSSEEWWAEVVRATFSGAGISAETLGIDKGGGGIFTDVFQCLYHDIFTSTRAWELVPGAEEVIEDLRKWCQEPDGPLALGAMSNFDERLHPLLKNLGVHDSFDFVLTSRECSSEKPDPGMFLEALKRVGAEGRDRGVIVGDTFRTDVLGARSVGWDAVLVTKEKASSAEEDSTGFDYSRVDSIGAVPAALGIGG 975
            M   PK+V LD TGT+ +++GS+   Y  A E   GV  G  P     + L   F ++    ++  P FG G  +SS  WW+ +  AT + A    E    ++    +F  +F  ++HD FT   AWE+ P  E VI+ LR         + +  +SNFDERL  LLKNLG+   FD VL S      KPDP +F +AL++   EG +  V VGD ++ D  GA+  G     +    A + E+ +       + ++  +  ALG+ G
Sbjct:    1 MQVRPKLVSLDATGTLFRVRGSVGEAYARAAE-AFGV-HGLRP-----ASLTRGFFAAWRDHNVRHPNFGHGTELSSYNWWSSLFGATLAHA--RPELSHSEEFAADVFPKLFDQVWHD-FTRAEAWEVFPETEPVIKTLRS------NGIKVAVVSNFDERLPLLLKNLGLDHLFDVVLPSCYAGVAKPDPDIFYQALRKANVEGSEA-VHVGDDYKKDYRGAKDAGLSRAFLMCRDAVALEKAAQVPPADILHNLSDLLPALGLQG 251          
BLAST of mRNA_P-fluviatile_contig13.1930.1 vs. uniprot
Match: A0A834NTZ4_VESGE (Uncharacterized protein n=6 Tax=Vespinae TaxID=7439 RepID=A0A834NTZ4_VESGE)

HSP 1 Score: 115 bits (287), Expect = 4.150e-25
Identity = 70/239 (29.29%), Postives = 124/239 (51.88%), Query Frame = 1
Query:  187 PKVVCLDCTGTIMQIKGSIPRLYLGALEDRLGVSEGELPDEVSESGLMESFKSSLNRRSMELPCFGAGV-VSSEEWWAEVVRATFSGAGISAETLGIDKGGGGIFTDVFQCLYHDIFTSTRAWELVPGAEEVIEDLRKWCQEPDGPLALGAMSNFDERLHPLLKNLGVHDSFDFVLTSRECSSEKPDPGMFLEALKRVGAEGR-----DRGVIVGDTFRTDVLGARSVGWDAVLVTKEK 885
            P+++  D TGT++  K     + +G    + G+S       +    L +SFK++  R ++E P +G    +  E WW  +V   F     +  T  +DK    +   + +C     +++++ W + PGA E++E LRK+       + LG +SNFDERL P+L +L +   F FVLTS +   EKPD  +F+EAL+    + +      + + +GDT   D  GA++  W+++L++ E+
Sbjct:    7 PRLITFDVTGTLLMTKLEEHYIEVG---HKYGLS-------IEPRQLAQSFKNNFRRLAIEHPIYGKYTGLGWENWWRTIVYNVFKDQNKNVSTETLDK----VANTLIEC-----YSTSKCWHMYPGAIELLECLRKYR------IVLGVISNFDERLEPILIDLKIRPFFSFVLTSYDFGKEKPDVSIFVEALRLANKDQKVDIVPQQAIHIGDTIDNDYFGAKNAQWNSLLISHEQ 220          
BLAST of mRNA_P-fluviatile_contig13.1930.1 vs. uniprot
Match: A0A8C4PXL1_EPTBU (Haloacid dehalogenase-like hydrolase domain-containing protein 3 n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4PXL1_EPTBU)

HSP 1 Score: 114 bits (285), Expect = 6.110e-25
Identity = 85/266 (31.95%), Postives = 129/266 (48.50%), Query Frame = 1
Query:  178 SANPKVVCLDCTGTIMQIKGSIPRLYLGALEDRLGVSEGELPDEVSESGLMESFKSSLNRRSMELPCFG---AGVVSSEEWWAEVVRATFSGAGISAETLGIDKGGGGIFTDVFQCLYHDIFTSTRAWELVPGAEEVIEDLRKWCQEPDGPLALGAMSNFDERLHPLLKNLGVHDSFDFVLTSRECSSEKPDPGMFLEALKRVGAEGRDRGVIVGDTFRTDVLGARSVGWDAVLVTKEKASSAEEDSTGFDYSRV-DSIGAVPAAL 963
            S + +++  D TGT+++++GS+   Y  A     G+  G     V+   L  +F+ +   +S   PC+G   AG   +  WWA VV+ TF+  G+    L            +   LYH++    R WE+       +     WC+       LG +SNFD+RL+ +L  +G+   FDFVLTS E  ++KP P +F  ALK  G +   + V +GD   TD LGA S G  A L+ + KA  AE  S      R+ DS+  +P  L
Sbjct:    3 SQSVRLITWDATGTLLRVRGSVGEQYKAA-----GLLFGLASPRVT--SLNAAFREAYAHQSRLKPCYGSTCAGKSGANRWWASVVQETFNRCGVRDPPL---------IMKIADYLYHEMKRPDR-WEVFGDVHPTLS----WCKTQG--FRLGVLSNFDKRLNDILSGVGLRSYFDFVLTSDEMGTQKPQPEVFHLALKHTGVQA-GQAVHIGDDPVTDYLGATSSGMAAFLLKRNKA--AELKSILIPPHRILDSLDDLPPLL 242          
BLAST of mRNA_P-fluviatile_contig13.1930.1 vs. uniprot
Match: A0A7L4GQK7_PODST (Haloacid dehalogenase-like hydrolase domain-containing protein 3 (Fragment) n=1 Tax=Podargus strigoides TaxID=8905 RepID=A0A7L4GQK7_PODST)

HSP 1 Score: 110 bits (274), Expect = 1.490e-23
Identity = 66/188 (35.11%), Postives = 102/188 (54.26%), Query Frame = 1
Query:  310 VSESGLMESFKSSLNRRSMELPCFGAGV-VSSEEWWAEVVRATFSGAGISAETLGIDKGGGGIFTDVFQCLYHDIFTSTRAWELVPGAEEVIEDLRKWCQEPDGPLALGAMSNFDERLHPLLKNLGVHDSFDFVLTSRECSSEKPDPGMFLEALKRVGAEGRDRGVIVGDTFRTDVLGARSVGWDAVL 870
            V    L  SF+ +   +S   P +G G  +SS++WWA+VV+ TF  AG+  +          + T + + LYHD F S R WE++PGA E +    +WC++      +G +SNFD RL  +L    +   FDFVLTS++    KPD  +F +AL R+G    ++   VGD++  D   AR++G  + L
Sbjct:   38 VQPGALSHSFREAYGAQSRRFPNYGRGQGLSSQQWWADVVKQTFRLAGVHEDR---------VLTLIAENLYHD-FCSARNWEVLPGAGETL----RWCRQRG--FHMGVVSNFDSRLEDILSQCNLRHHFDFVLTSKDAGFAKPDRRIFEQAL-RLGGVLPEQAAHVGDSYTRDYRAARALGMHSFL 208          
BLAST of mRNA_P-fluviatile_contig13.1930.1 vs. uniprot
Match: A0A7K4Y854_BUCAB (Haloacid dehalogenase-like hydrolase domain-containing protein 3 (Fragment) n=1 Tax=Bucorvus abyssinicus TaxID=153643 RepID=A0A7K4Y854_BUCAB)

HSP 1 Score: 107 bits (267), Expect = 1.320e-22
Identity = 70/198 (35.35%), Postives = 102/198 (51.52%), Query Frame = 1
Query:  310 VSESGLMESFKSSLNRRSMELPCFGAGV-VSSEEWWAEVVRATFSGAGISAETLGIDKGGGGIFTDVFQCLYHDIFTSTRAWELVPGAEEVIEDLRKWCQEPDGPLALGAMSNFDERLHPLLKNLGVHDSFDFVLTSRECSSEKPDPGMFLEALKRVGAEGRDRGVIVGDTFRTDVLGARSVGWDAVLVTKEKASSAE 900
            V  + L  SF+ +   +S   P +G G  +SS++WWA+VV+ TF  +G+  E         G+ T + + LYHD F S R WE++P A+E    L + CQ       +G +SNFD+RL  +L    +   FDFVLTS E    KPD  +F EAL+  G     +   VGD +  D   AR+VG  + L+   +    E
Sbjct:   38 VQPAALSRSFQEAYRAQSRRFPNYGLGQGLSSQQWWADVVKETFRLSGVHEE---------GVLTLMAENLYHD-FCSARNWEVLPEADET---LSQCCQRG---FRMGVISNFDKRLENILSQCSLRHHFDFVLTSEEAGFAKPDRRIFEEALRLAGVL-PGQAAHVGDDYSRDYRAARAVGMHSFLLQVARGQGEE 218          
BLAST of mRNA_P-fluviatile_contig13.1930.1 vs. uniprot
Match: A0A8D8W937_9HEMI (Rhythmically expressed gene 2 protein n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8W937_9HEMI)

HSP 1 Score: 106 bits (265), Expect = 3.280e-22
Identity = 76/261 (29.12%), Postives = 126/261 (48.28%), Query Frame = 1
Query:  175 MSANPKVVCLDCTGTIMQIKGSIPRLYLGALEDRLGVSEGELPDEVSESGLMESFKSSLNRRSMELPCFGAGVVSSEEWWAEVVRA----TFSGAGISAETLGIDKGGGGIFTDVFQCLYHDIFTSTRAWELVPGAEEVIEDLRKWCQEPDGPLALGAMSNFDERLHPLLKNLGVHDSFDFVLTSRECSSEKPDPGMFLEALKRVGAEGRDRGVIVGDTFRTDVLGARSVGWDAVLVTKEKASS-AEEDSTGFDYSRVDSI 942
            MS   K++  D TGT+++ + +    Y+       G   G +   ++ + +  SF           P FG+G +  ++WW  VV +    T++G G  +E+  IDK     F D+ +      ++    W+L  GA E++E L          + LG +SNFD RLH LLK + ++  F FV+TS E    KPDP +F  A     +   D  + +GD F  D   A  VGW+A+L++     + +E DS+   +S ++S+
Sbjct:    1 MSCRFKLITFDVTGTLLRFRRTAGEQYV-----ETGKKFGHV---LNANEVQNSFVKHYKVYDRAYPNFGSGSIGWQQWWRNVVSSCFIETYNGPGQLSES-DIDK----FFNDLIKS-----YSDNTGWKLAEGATELLEMLHS------RNIMLGVVSNFDARLHNLLKEMKLYHYFKFVITSYESGLVKPDPKIFKLAESLASSSPSDIKIHIGDNFDLDYKAALDVGWNALLISHAFGKNESENDSSDLIFSDLNSV 237          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KEX8_9PHAE4.140e-12868.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J5XU42_DIALT2.130e-3936.04Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S2STH1_9STRA1.260e-3837.69Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2PCP1_9STRA2.820e-3335.93Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
L8GZ50_ACACA5.630e-2832.84HAD hydrolase, REG2-like, family IA subfamily prot... [more]
A0A834NTZ4_VESGE4.150e-2529.29Uncharacterized protein n=6 Tax=Vespinae TaxID=743... [more]
A0A8C4PXL1_EPTBU6.110e-2531.95Haloacid dehalogenase-like hydrolase domain-contai... [more]
A0A7L4GQK7_PODST1.490e-2335.11Haloacid dehalogenase-like hydrolase domain-contai... [more]
A0A7K4Y854_BUCAB1.320e-2235.35Haloacid dehalogenase-like hydrolase domain-contai... [more]
A0A8D8W937_9HEMI3.280e-2229.12Rhythmically expressed gene 2 protein n=1 Tax=Caco... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2910260..2914139 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score390.6
Seed ortholog evalue6.8e-106
Seed eggNOG ortholog2880.D8LT61
Preferred nameHDHD3
KEGG koko:K07025,ko:K11853
GOsGO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0044237
EggNOG free text desc.N-acylneuraminate-9-phosphatase activity
EggNOG OGsCOG1011@1,KOG3085@2759
EC3.4.19.12
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionhaloacid dehalogenase-like hydrolase
Ec32 orthologEc-12_005370.1
Exons5
Model size1882
Cds size915
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815582.6195848-UTR-P-fluviatile_contig13:2910259..29111571622815582.6195848-UTR-P-fluviatile_contig13:2910259..2911157Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2910260..2911157 -
1693562348.083123-UTR-P-fluviatile_contig13:2910259..29111571693562348.083123-UTR-P-fluviatile_contig13:2910259..2911157Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2910260..2911157 -
1622815582.7008026-UTR-P-fluviatile_contig13:2914070..29141391622815582.7008026-UTR-P-fluviatile_contig13:2914070..2914139Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2914071..2914139 -
1693562348.145725-UTR-P-fluviatile_contig13:2914070..29141391693562348.145725-UTR-P-fluviatile_contig13:2914070..2914139Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2914071..2914139 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815582.6300948-CDS-P-fluviatile_contig13:2911157..29114221622815582.6300948-CDS-P-fluviatile_contig13:2911157..2911422Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2911158..2911422 -
1693562348.0961454-CDS-P-fluviatile_contig13:2911157..29114221693562348.0961454-CDS-P-fluviatile_contig13:2911157..2911422Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2911158..2911422 -
1622815582.6404204-CDS-P-fluviatile_contig13:2911828..29119111622815582.6404204-CDS-P-fluviatile_contig13:2911828..2911911Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2911829..2911911 -
1693562348.1057677-CDS-P-fluviatile_contig13:2911828..29119111693562348.1057677-CDS-P-fluviatile_contig13:2911828..2911911Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2911829..2911911 -
1622815582.654823-CDS-P-fluviatile_contig13:2912657..29127291622815582.654823-CDS-P-fluviatile_contig13:2912657..2912729Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2912658..2912729 -
1693562348.1172745-CDS-P-fluviatile_contig13:2912657..29127291693562348.1172745-CDS-P-fluviatile_contig13:2912657..2912729Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2912658..2912729 -
1622815582.6747172-CDS-P-fluviatile_contig13:2913244..29135601622815582.6747172-CDS-P-fluviatile_contig13:2913244..2913560Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2913245..2913560 -
1693562348.12906-CDS-P-fluviatile_contig13:2913244..29135601693562348.12906-CDS-P-fluviatile_contig13:2913244..2913560Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2913245..2913560 -
1622815582.6903918-CDS-P-fluviatile_contig13:2913891..29140701622815582.6903918-CDS-P-fluviatile_contig13:2913891..2914070Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2913892..2914070 -
1693562348.1371062-CDS-P-fluviatile_contig13:2913891..29140701693562348.1371062-CDS-P-fluviatile_contig13:2913891..2914070Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2913892..2914070 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1930.1prot_P-fluviatile_contig13.1930.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 2911158..2914070 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1930.1

>prot_P-fluviatile_contig13.1930.1 ID=prot_P-fluviatile_contig13.1930.1|Name=mRNA_P-fluviatile_contig13.1930.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=305bp
MCPLYSRLAFAVGGSLVPLRSRCSALQATQQRLLRMSANPKVVCLDCTGT
IMQIKGSIPRLYLGALEDRLGVSEGELPDEVSESGLMESFKSSLNRRSME
LPCFGAGVVSSEEWWAEVVRATFSGAGISAETLGIDKGGGGIFTDVFQCL
YHDIFTSTRAWELVPGAEEVIEDLRKWCQEPDGPLALGAMSNFDERLHPL
LKNLGVHDSFDFVLTSRECSSEKPDPGMFLEALKRVGAEGRDRGVIVGDT
FRTDVLGARSVGWDAVLVTKEKASSAEEDSTGFDYSRVDSIGAVPAALGI
GGRR*
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mRNA from alignment at P-fluviatile_contig13:2910260..2914139-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1930.1 ID=mRNA_P-fluviatile_contig13.1930.1|Name=mRNA_P-fluviatile_contig13.1930.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3880bp|location=Sequence derived from alignment at P-fluviatile_contig13:2910260..2914139- (Porterinema fluviatile SAG_2381)
CCTCTCCCAATCGCTCTGCCCAACCTCTTAGTACTGCGTGAGCGCGCAAT ACTGGGCCTTAAGCCGTAAATGTGTCCCCTCTACTCTCGCCTAGCATTCG CAGTTGGTGGAAGCCTCGTCCCTCTGCGGTCTCGGTGTTCTGCGCTGCAG GCAACACAGCAGCGGCTCCTTCGAATGAGTGCGAACCCAAAGGTCGTGTG CTTAGATTGCACAGGTACAATCATGCAGATCAAGGGCTCGATACCAAGGT GTGCATGGAGGTCCATAAATGTTTTGCACGCAACATTCTGCCATGTCACC GCTGTGCATTTTGCAGTGCTGATCTGTACTGCGTCAAGCGAGGAAACGTG CTGTTCGACGTCTGACCACGCTCGTAAAAAAATGTTGTGTTGAGGACAAG CGCCAGCAGAACATACATATCTACGTGTGCAACGCGTCTAGCACGTTTGT CTCGAGGAAAATGGTTCATTGGTAGAAGTGTGCTACGTCTACACCAGTGC GAGGTGGCGCACATGGATCGGCCACCTTCTCATCATAGGGCACACTTTTT CTCTCGTGCCGCCCCCGCTGTCGCGACAGGCTGTACTTGGGGGCGCTGGA AGACCGGTTGGGCGTGTCAGAGGGCGAGCTCCCTGATGAAGTTTCCGAAT CGGGCCTGATGGAATCCTTCAAATCATCTCTCAACCGGAGGTCGATGGAG CTGCCGTGCTTTGGAGCCGGGGTTGTTTCCTCGGAGGAGTGGTGGGCTGA AGTGGTGCGGGCGACGTTCTCAGGGGCTGGGATTTCTGCCGAAACCCTTG GGATCGACAAGGGCGGCGGCGGCATTTTCACCGACGTATTTCAATGCCTT TACCACGATATCTTCACCAGCACGAGGGCGTGGGAGCTTGTGCCCGTAAG TTATACTCAAGCCGACGTCGCAATCATGTTGTGTTTCAGCAGCTTGTATG TAATCCTTTTCAAGCACGCCGCGTGCGCAATTGAATGCACTTGAACGTGC TTGAACGCGCAGGTGGGGTGCGGTCCTGGCGGTTGAGGTCATCGCCGGGC GTGCGAGGCAGGCATGGTCCGGCTCGTTGTGCTTGGGCAAGATCAAAAAC TCTACAGCGTATTAACTTGAAGGGCGCCGGCCTACGCAGCAAGCCCAGCC ATAGTTACAAATGGTCGACTTCCGTCGAACGATATTTGGCCTTTCCCGAC GAGTAGCCACCGCTTGGGTCCTGCTTTGTGTCGTGCACAGCCCCACAGAG ACAGGCAGCCCATTCGCAAAGCCCCGGACTTCTTGAAAGTCAGTCGAGCA CCTTGCTCCCCCCCGTAGGAATGCAACAACATGGCATCTGCTGCTTCTTG TGCTACATTCCGTGACGCGTTTCTGCTGAACCGCGCGGGGGGGGGGGCTC ACGAGGGCAGGGCGCGGAGGAAGTGATCGAGGACCTCCGAAAGTGGTGCC AAGAACCCGACGGACCCCTGGCGCTTGGTGCGGTGCGTTGGCAACAGGAA TCCTGCATCGCACACGCGGGTATTCGTTCCGTTGGAGTCTCACGACGGGC AGCGTCTCCCCTTGTTGAATGGAAAAAAGCATCGAACTTAATCCAACAGA GACTTGTGCGGCTTATTTTCCTACGGTCGTGGCTCGGGAAAAACGATATT CATGTATGGGACGCTGCCCATCCCGCGGTTCCGCTGGCACGGAATAACGT GCACACGGTCGACTTTGTTGTGAAGCCCGACTAACGGTGAGCTGTGCTCC GGCGGCGGTTGGTTGTTAATCGCGCAGCTTTTTTTGACCGGGCGCGTAAG ACGCACATTTGTACCGCACAGTCCATGTTTCGGATCCCGCGAGAGTTGCC CTTGGCGAGTGCGCTGATCATCCAATATTTGTACAAGCATTCTTTTTCGC GGCCAGGGGCGGTAACCATTCCACCGATCCCGCCTCCTGAAACCTGAAAA ACAACGGGATTTTTTGCCACGGTGGGGGCCATCATTCATGTATCCGGAGT TCAACGCAGAACGCTGGAACTGGAGGGCAGGTGCCGTGGCAGCAGTGGCA ATGCCCTCATGTCGGCTTCAGAGGCGACGGTAGCACGGCAAAAGCTTGAG AGTGAGCTCGTGCTGGTGTTTGTTGTGACCACATATGTCTTGCAGCGGTC CAGCTTTTACGTACGATCTTATTCTTTCCCCCCGCCGCCCCACCCTCTCG GCCTTTCGTCGACACACCGAGAAAAAAGATGTCTAACTTCGACGAGCGCC TCCATCCGCTCCTGAAAAACCTCGGCGTCCACGACTCCTTCGACTTCGTG CTTACTTCCAGGTCCGAGCCAGTTGTCCGCTTCCCAGTAGCTTCAGCGGA TCCTTGCGTTTTTTTTCTGTTCATTTGGGTCGTGCACGTGTCTGTGTGGA AGTTTTTCTTCTCGTAGTGTCGTTTGCTCGTACTTGTCTGTTCCAATGTT GTTTTTCCCATCAAATAATTCACGTCCTCGGCGTTCCCCGAAATGTGGCC GCGATTCCGTCGGGTGCTCTGCCATCGTCGAATGGGCTATGTGCGCACGA ACGCCCTCGAAAGGGAATTCCGAGAATATGTAGTCGTTGTCTATTTTAAA AGTTTCCTTCGTCTCCGAACACCGTTCGCGAATCAATTCATCTGGGATTT TTTTTCGCACGCCGCCCTTGTTTTTGATGCGGGACGCGAATCGCGCCTCG TTTTTTCGTTTGTAAAGGGAGTGCAGCTCGGAGAAACCGGACCCCGGTAT GTTCCTGGAAGCTCTCAAGAGGGTGGGGGCTGAAGGCCGAGACAGAGGGG TGATCGTCGGCGACACGTTCAGGACGGACGTGCTCGGCGCGAGATCCGTC GGCTGGGACGCCGTGCTCGTCACGAAGGAGAAAGCCTCCTCCGCCGAGGA GGACTCGACGGGCTTCGATTACTCCCGCGTCGATAGCATAGGAGCCGTAC CCGCGGCGCTGGGTATCGGCGGAAGACGTTGAAAATAAAGGTATTGTATC GAGCGGGTTTTTTGTTGTGTTGTCTCCGTGTTATCGCCGAATGGGTGGTT TTACCGACGGCGAAGAAGTCTGTTGCGGTTATGAAATCCCGTCGCGAGTT GATACGGCTCGCGTTGGAAGGGGTATCCGTTGTGCCCTCTGTACCATGAC CTGTGTATTCTACGTGCGTTTCTTTGTGCAGTTTCAGCTTCCAGTCAGTT CTGCGCGTACTCCTGGCAGGTTAAGCGTAGACACAACTTGGGGGCTAGAT AGAGCAATTCCTTGCTCAAAAACCCGTGGGGTTGCGTGCGTGCGTGCGCT AGTCTTTCGTGGAAAAAAATATGATGCATCTAGTCCCCTGTGATTTGTTC TTTGTCAAAGGATATTCCTGTTTGTGTAGAGCAGAACCAGGTGAGGGCGG ATGGCGCTTACGATCCCACAGAGATGATTATTGCTATGACGAGCTCCCTT AATGGCCACGAAGTCGCGTGTCGGGTTCCAACATCAGACGGCAGAGAATG CTCTTACCTCCCTCGTTTTTTTGCGCGAATTCGACGAGGCGATCTTTCAT TTATTTTTGTGGGGTGGCTCACCCTTTTCCTCTGGAGGGAAGCTGCAGCA TTGGGCGAGGGAACGCGACCGATGTTTCCTGCCACGAAAACAGTATGGAC GCTTTTGAAGATCCCTATGCATTGCTCCTGCCTCCATTGGCTTGTAATCC TTTTATCTAGATCATTGTGGTTTCGTGGGCGTGGGTTCAAGGAAGTCTTC GATGGAGATATTTTTGCAGGGGATAAGTTAAGCGTAGATCAGGCTACACT GTTTTTCGAGGAACTGTTCGCAAGATTGGAGTGTCGCGCCCACTGTACAC CAGGGCCGTCTTTTGGAGGTTGCTTTCGTC
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:2910260..2914139-

>mRNA_P-fluviatile_contig13.1930.1 ID=mRNA_P-fluviatile_contig13.1930.1|Name=mRNA_P-fluviatile_contig13.1930.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1830bp|location=Sequence derived from alignment at P-fluviatile_contig13:2910260..2914139- (Porterinema fluviatile SAG_2381)
ATGTGTCCCCTCTACTCTCGCCTAGCATTCGCAGTTGGTGGAAGCCTCGT
CCCTCTGCGGTCTCGGTGTTCTGCGCTGCAGGCAACACAGCAGCGGCTCC
TTCGAATGAGTGCGAACCCAAAGGTCGTGTGCTTAGATTGCACAGGTACA
ATCATGCAGATCAAGGGCTCGATACCAAGATGTGTCCCCTCTACTCTCGC
CTAGCATTCGCAGTTGGTGGAAGCCTCGTCCCTCTGCGGTCTCGGTGTTC
TGCGCTGCAGGCAACACAGCAGCGGCTCCTTCGAATGAGTGCGAACCCAA
AGGTCGTGTGCTTAGATTGCACAGGTACAATCATGCAGATCAAGGGCTCG
ATACCAAGGCTGTACTTGGGGGCGCTGGAAGACCGGTTGGGCGTGTCAGA
GGGCGAGCTCCCTGATGAAGTTTCCGAATCGGGCCTGATGGAATCCTTCA
AATCATCTCTCAACCGGAGGTCGATGGAGCTGCCGTGCTTTGGAGCCGGG
GTTGTTTCCTCGGAGGAGTGGTGGGCTGAAGTGGTGCGGGCGACGTTCTC
AGGGGCTGGGATTTCTGCCGAAACCCTTGGGATCGACAAGGGCGGCGGCG
GCATTTTCACCGACGTATTTCAATGCCTTTACCACGATATCTTCACCAGC
ACGAGGGCGTGGGAGCTTGTGCCCGCTGTACTTGGGGGCGCTGGAAGACC
GGTTGGGCGTGTCAGAGGGCGAGCTCCCTGATGAAGTTTCCGAATCGGGC
CTGATGGAATCCTTCAAATCATCTCTCAACCGGAGGTCGATGGAGCTGCC
GTGCTTTGGAGCCGGGGTTGTTTCCTCGGAGGAGTGGTGGGCTGAAGTGG
TGCGGGCGACGTTCTCAGGGGCTGGGATTTCTGCCGAAACCCTTGGGATC
GACAAGGGCGGCGGCGGCATTTTCACCGACGTATTTCAATGCCTTTACCA
CGATATCTTCACCAGCACGAGGGCGTGGGAGCTTGTGCCCGGCGCGGAGG
AAGTGATCGAGGACCTCCGAAAGTGGTGCCAAGAACCCGACGGACCCCTG
GCGCTTGGTGCGGGCGCGGAGGAAGTGATCGAGGACCTCCGAAAGTGGTG
CCAAGAACCCGACGGACCCCTGGCGCTTGGTGCGATGTCTAACTTCGACG
AGCGCCTCCATCCGCTCCTGAAAAACCTCGGCGTCCACGACTCCTTCGAC
TTCGTGCTTACTTCCAGATGTCTAACTTCGACGAGCGCCTCCATCCGCTC
CTGAAAAACCTCGGCGTCCACGACTCCTTCGACTTCGTGCTTACTTCCAG
GGAGTGCAGCTCGGAGAAACCGGACCCCGGTATGTTCCTGGAAGCTCTCA
AGAGGGTGGGGGCTGAAGGCCGAGACAGAGGGGTGATCGTCGGCGACACG
TTCAGGACGGACGTGCTCGGCGCGAGATCCGTCGGCTGGGACGCCGTGCT
CGTCACGAAGGAGAAAGCCTCCTCCGCCGAGGAGGACTCGACGGGCTTCG
ATTACTCCCGCGTCGATAGCATAGGAGCCGTACCCGCGGCGCTGGGTATC
GGCGGAAGACGTTGAGGAGTGCAGCTCGGAGAAACCGGACCCCGGTATGT
TCCTGGAAGCTCTCAAGAGGGTGGGGGCTGAAGGCCGAGACAGAGGGGTG
ATCGTCGGCGACACGTTCAGGACGGACGTGCTCGGCGCGAGATCCGTCGG
CTGGGACGCCGTGCTCGTCACGAAGGAGAAAGCCTCCTCCGCCGAGGAGG
ACTCGACGGGCTTCGATTACTCCCGCGTCGATAGCATAGGAGCCGTACCC
GCGGCGCTGGGTATCGGCGGAAGACGTTGA
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