mRNA_P-fluviatile_contig13.1906.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1906.1
Unique NamemRNA_P-fluviatile_contig13.1906.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig13.1906.1 vs. uniprot
Match: D8LS96_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS96_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 2.270e-115
Identity = 242/357 (67.79%), Postives = 258/357 (72.27%), Query Frame = 2 
Query:  233 MSIVNVINVVVLDNPSSFGSPLTFEVTFECLEALDADLEWKVIYVGSAEDTRYDQVLEEVDVGPIPIGVNKFVLTAESPDPATIPPTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPAEMLDPAQITRNILADKPRVTRFPIDWNAAPGEAGAAAAXXXXXXXXXG--------EGDDEMGVDKAAEEGAXXXXRANTGGEVSDSMGSYGEDEGSMVDSEEGXXXXXXXXMADEGDADDMDADSSGAEEMEDLAGDEARAEAAAMIKAGEGSVTARVAPATG--SQGVLSAASDQRQNIQPVVALPSSGVGAHAST-----VGQVNCGGVATGIPAAPSTT 1258
            MSIVNV NVVVLDNP++F +PLTFEVTFECLEALDADLEWKVIYVGSAEDT+YDQVLEEVDVGPIPIGVNKFVLTAESPDPATIPPTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPA+NAEIQEGRIPPA+ LDPA ITRNILADKPRVTRFPIDWNAAPGEAGAAA XXXXXXXXX         + DDEMGVD   +EG XXXX                            XXXXXXXX             SSGAEEMED+AGDEARA  AAM  A          P  G  S  VLSAASD  +NIQP+V LP+SG    ++T       QV+CG  A GI AAP+ T
Sbjct:    1 MSIVNVTNVVVLDNPTAFKNPLTFEVTFECLEALDADLEWKVIYVGSAEDTQYDQVLEEVDVGPIPIGVNKFVLTAESPDPATIPPTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAVNAEIQEGRIPPADTLDPAHITRNILADKPRVTRFPIDWNAAPGEAGAAAXXXXXXXXXXXXXXADGAMDEDDEMGVDNGVDEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---SSGAEEMEDVAGDEARAGTAAMRGAAXXXXXXXATPVAGGLSTRVLSAASDPNENIQPIV-LPNSGSAPASATQVAAVAEQVSCG-KADGIAAAPAAT 352
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BLAST of mRNA_P-fluviatile_contig13.1906.1 vs. uniprot
Match: A0A7S0FP47_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FP47_9STRA)

HSP 1 Score: 213 bits (543), Expect = 4.450e-61
Identity = 100/168 (59.52%), Postives = 130/168 (77.38%), Query Frame = 2 
Query:  233 MSIVNVINVVVLDNPSSFGSPLTFEVTFECLEALDADLEWKVIYVGSAEDTRYDQVLEEVDVGPIPIGVNKFVLTAESPDPATIPPTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPAEMLDPAQITRNILADKPRVTRFPIDWNAAPGEAG 736
            M++VNV+N+VVLDNP++F +P  FE+TFECL+ L+ DLEWKV+YVGSAED   DQ+L+E+ VGP+P+GVNKFVL A++PDPA+IP  D++GVTV L+TC YK+REFIR+GYYVNNE+ DP       +  + P   LD  ++ R ILADKPRVTRF I W+ A  E G
Sbjct:    1 MALVNVVNMVVLDNPTNFRNPFQFEITFECLQELEDDLEWKVVYVGSAEDMTADQILDEILVGPVPVGVNKFVLQADAPDPASIPNADILGVTVVLVTCSYKEREFIRIGYYVNNEYADP------YDPEVGPPSPLDIKKVVRTILADKPRVTRFNIPWDGAEEEKG 162
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BLAST of mRNA_P-fluviatile_contig13.1906.1 vs. uniprot
Match: A0A7S4WBT6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WBT6_9STRA)

HSP 1 Score: 210 bits (535), Expect = 6.530e-60
Identity = 96/161 (59.63%), Postives = 129/161 (80.12%), Query Frame = 2 
Query:  233 MSIVNVINVVVLDNPSSFGSPLTFEVTFECLEALDADLEWKVIYVGSAEDTRYDQVLEEVDVGPIPIGVNKFVLTAESPDPATIPPTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPAEMLDPAQITRNILADKPRVTRFPIDWN 715
            M++VNV+N++VLDNP++F +P  FE+TFECL+ L+ DLEWKV+YVGSAE + +DQVL+E+ VGP+P+G+NKFVL AE PDP  IPP D++GVTV L+TC Y++REF+R+GYYVNNE++      E  E   PP + ++  ++TR ILADKPRVTRFPI WN
Sbjct:    1 MALVNVVNMMVLDNPTAFLNPFQFEITFECLQELEEDLEWKVVYVGSAESSEHDQVLDEILVGPVPVGINKFVLQAEPPDPRRIPPNDIIGVTVVLVTCAYREREFVRIGYYVNNEYS-----GEYDEETGPP-KPIELGKVTRMILADKPRVTRFPIPWN 155
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BLAST of mRNA_P-fluviatile_contig13.1906.1 vs. uniprot
Match: A0A7S2LP02_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LP02_9STRA)

HSP 1 Score: 211 bits (536), Expect = 6.880e-60
Identity = 100/163 (61.35%), Postives = 127/163 (77.91%), Query Frame = 2 
Query:  233 MSIVNVINVVVLDNPSSFGSPLTFEVTFECLEALDADLEWKVIYVGSAEDTRYDQVLEEVDVGPIPIGVNKFVLTAESPDPATIPPTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPAEMLDPAQITRNILADKPRVTRFPIDWNAA 721
            M++VNV+N+VVLDNP+ F +P  FE+TFECL+ LD DLEWKV+YVGSAED+ +DQVLEEV VGP+P+GVNKFVL A++ DPATIP  D++GVTV L+TC YK +EF R+GYYVNNE   P      + G+      +D +++ R ILADKPRVTRFPIDW+ A
Sbjct:    1 MALVNVVNMVVLDNPTHFRNPFQFEITFECLQELDDDLEWKVVYVGSAEDSTHDQVLEEVLVGPVPVGVNKFVLQADAADPATIPKEDILGVTVVLVTCSYKNQEFARIGYYVNNEMELPPGTPVDESGKPIEDIPIDYSKLMRQILADKPRVTRFPIDWSGA 163
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BLAST of mRNA_P-fluviatile_contig13.1906.1 vs. uniprot
Match: A0A7S1C5P9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5P9_9STRA)

HSP 1 Score: 207 bits (526), Expect = 1.840e-59
Identity = 98/160 (61.25%), Postives = 124/160 (77.50%), Query Frame = 2 
Query:  233 MSIVNVINVVVLDNPSSFGSPLTFEVTFECLEALDADLEWKVIYVGSAEDTRYDQVLEEVDVGPIPIGVNKFVLTAESPDPATIPPTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPAEMLDPAQITRNILADKPRVTRFPIDW 712
            M+ VNV+N+ VLDNP++F +P  FEVTFEC+  L  DLEWKV+YVGSAE  ++DQ L+ V VGP+P+GVNKFV+    PDP+ IP TD++GVTV LITC YK +EFIRVGYYVNNE  +     E+ EG  PP +M +PA++ RNILA+KPRVTRFP+DW
Sbjct:    1 MASVNVLNISVLDNPTAFTNPFQFEVTFECVAELSDDLEWKVVYVGSAESDKFDQELDNVLVGPVPVGVNKFVMQTAPPDPSRIPKTDVLGVTVVLITCSYKSQEFIRVGYYVNNEWGE-----ELAEGEAPPEDM-EPAKVVRNILAEKPRVTRFPVDW 154
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BLAST of mRNA_P-fluviatile_contig13.1906.1 vs. uniprot
Match: A0A448ZRT8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRT8_9STRA)

HSP 1 Score: 206 bits (524), Expect = 3.320e-58
Identity = 101/174 (58.05%), Postives = 133/174 (76.44%), Query Frame = 2 
Query:  233 MSIVNVINVVVLDNPSSFGSPLTFEVTFECLEALDADLEWKVIYVGSAEDTRYDQVLEEVDVGPIPIGVNKFVLTAESPDPATIPPTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDP---AINAEIQEG----RIPPAEMLDPA---QITRNILADKPRVTRFPIDWNAAP 724
            M++VNV+N+VVLDNP+ F SP  FE+TFECL+ LD DLEWKV+YVGSA+D   DQ+L+E+ VGP+P+GVNKFVL A++PDP+ +   DL+GVTV L+TC YK+REF+RVGYYVNNE++DP   A +A+  E     ++PP  + +P    +I R ILADKPRVT+FPI W   P
Sbjct:    1 MALVNVVNMVVLDNPTCFTSPFQFEITFECLQELDDDLEWKVLYVGSAQDAAKDQILDEILVGPVPVGVNKFVLQADAPDPSQLAQDDLLGVTVVLVTCSYKEREFVRVGYYVNNEYHDPNAAASSAQASENDGEQQLPPP-IPNPVPLDRIQRQILADKPRVTKFPISWGDEP 173
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BLAST of mRNA_P-fluviatile_contig13.1906.1 vs. uniprot
Match: A0A7S2EDZ3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EDZ3_TRICV)

HSP 1 Score: 204 bits (520), Expect = 7.990e-58
Identity = 95/161 (59.01%), Postives = 126/161 (78.26%), Query Frame = 2 
Query:  233 MSIVNVINVVVLDNPSSFGSPLTFEVTFECLEALDADLEWKVIYVGSAEDTRYDQVLEEVDVGPIPIGVNKFVLTAESPDPATIPPTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPAEMLDPAQITRNILADKPRVTRFPIDWN 715
            M++VNV+N+ VLDNP+SF  P  FEVTFECL+ L+ D+EWKVIYVGSAE + +DQVL+E+ VGP+P+G+NKFVL A+ PD ++IP +D++GVTV L+TC YK +EF RVGYYVNNE+++        +  + P E LD +++ R ILADKPRVTRFPI WN
Sbjct:    1 MALVNVVNMTVLDNPTSFRKPFQFEVTFECLQELEDDIEWKVIYVGSAESSSHDQVLDEILVGPVPVGINKFVLEADPPDVSSIPQSDILGVTVALVTCSYKDQEFTRVGYYVNNEYSEEF------DPEVGPPEPLDLSKVVRTILADKPRVTRFPIAWN 155
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BLAST of mRNA_P-fluviatile_contig13.1906.1 vs. uniprot
Match: A0A7S2UL69_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UL69_9STRA)

HSP 1 Score: 204 bits (518), Expect = 2.190e-57
Identity = 101/162 (62.35%), Postives = 125/162 (77.16%), Query Frame = 2 
Query:  233 MSIVNVINVVVLDNPSSFGSPLTFEVTFECLEALDADLEWKVIYVGSAEDTRYDQVLEEVDVGPIPIGVNKFVLTAESPDPATIPPTDLVGVTVTLITCCYKQREFIRVGYYVNNEHN--DPAINAEIQEGRIPPAEMLDPAQITRNILADKPRVTRFPIDW 712
            M++VN++N+ VLDNP+SF +P  FEVTFECL+ LD DLEWKV+YVGSA D+  D VL+E+ VGPIP+GVNKFVL A++PDPA I   DL+GVTV L+TC YK+REF+RVGYYVNNE+   +PA   E      PP   L+ +QI R ILAD+PRVTRFPI W
Sbjct:    1 MALVNLVNMAVLDNPTSFLNPFQFEVTFECLQELDDDLEWKVLYVGSANDSTRDLVLDEILVGPIPVGVNKFVLQADAPDPAQISKEDLLGVTVVLVTCSYKEREFVRVGYYVNNEYPGLEPAAPGEDPP---PPPNPLEISQIVRTILADRPRVTRFPIPW 159
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BLAST of mRNA_P-fluviatile_contig13.1906.1 vs. uniprot
Match: A0A024TEU9_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TEU9_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.480e-57
Identity = 103/172 (59.88%), Postives = 124/172 (72.09%), Query Frame = 2 
Query:  233 MSIVNVINVVVLDNPSSFGSPLTFEVTFECLEALDADLEWKVIYVGSAEDTRYDQVLEEVDVGPIPIGVNKFVLTAESPDPATIPPTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPAEMLDPAQITRNILADKPRVTRFPIDWNAAPGEAGAAAA 748
            M+ V + N+ VLDNP++F +P  FEVTFEC   L+ DLEWK+ YVGSAED   DQVLEEV VGP+P+G NKFV  +E PDP  IP  D VGVTV L+TC YK REF+RVGYYVNN++ DP +         PPA ++D  ++ RNILADKPRVTRFPIDW  APG  GA A+
Sbjct:    1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAHPLEDDLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPDPNNIPEEDKVGVTVVLVTCSYKSREFVRVGYYVNNDYTDPFLLEN------PPA-VVDIHKLQRNILADKPRVTRFPIDW--APGATGAGAS 163
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BLAST of mRNA_P-fluviatile_contig13.1906.1 vs. uniprot
Match: A0A3R8D5G5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R8D5G5_9STRA)

HSP 1 Score: 201 bits (512), Expect = 5.370e-57
Identity = 102/171 (59.65%), Postives = 123/171 (71.93%), Query Frame = 2 
Query:  233 MSIVNVINVVVLDNPSSFGSPLTFEVTFECLEALDADLEWKVIYVGSAEDTRYDQVLEEVDVGPIPIGVNKFVLTAESPDPATIPPTDLVGVTVTLITCCYKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPAEMLDPAQITRNILADKPRVTRFPIDWNAAPGEAGAAA 745
            M+ V + N+ VLDNP++F +P  FEVTFEC   L+ DLEWK+ YVGSAED   DQVLEEV VGP+P+G NKFV  +E PD + IP  D VGVTV L+TC YK REF+RVGYYVNN++ DP +         PPA ++D  ++ RNILADKPRVTRFPIDW  APG  GA A
Sbjct:    1 MAYVTLTNITVLDNPTAFTNPFQFEVTFECAHPLEDDLEWKITYVGSAEDESRDQVLEEVLVGPVPVGTNKFVFQSEPPDSSIIPEEDKVGVTVVLVTCSYKSREFVRVGYYVNNDYTDPFLLEN------PPA-IVDIHKLQRNILADKPRVTRFPIDW--APGATGAPA 162
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1906.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS96_ECTSI2.270e-11567.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0FP47_9STRA4.450e-6159.52Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S4WBT6_9STRA6.530e-6059.63Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
A0A7S2LP02_9STRA6.880e-6061.35Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S1C5P9_9STRA1.840e-5961.25Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A448ZRT8_9STRA3.320e-5858.05Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2EDZ3_TRICV7.990e-5859.01Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2UL69_9STRA2.190e-5762.35Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A024TEU9_9STRA2.480e-5759.88Uncharacterized protein n=4 Tax=Aphanomyces TaxID=... [more]
A0A3R8D5G5_9STRA5.370e-5759.65Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2770863..2775156 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score362.5
Seed ortholog evalue2.2e-97
Seed eggNOG ortholog2880.D8LS96
Preferred nameASF1
KEGG koko:K10753
GOsGO:0000003,GO:0000228,GO:0000785,GO:0000790,GO:0001932,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006335,GO:0006336,GO:0006337,GO:0006338,GO:0006342,GO:0006348,GO:0006355,GO:0006357,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007610,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009791,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0016043,GO:0016458,GO:0016567,GO:0016569,GO:0016570,GO:0016573,GO:0016574,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0018991,GO:0019098,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019953,GO:0022411,GO:0022412,GO:0022414,GO:0022607,GO:0030154,GO:0030466,GO:0031056,GO:0031058,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031497,GO:0031498,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032784,GO:0032786,GO:0032968,GO:0032984,GO:0032986,GO:0033043,GO:0033044,GO:0033523,GO:0033554,GO:0034243,GO:0034622,GO:0034641,GO:0034645,GO:0034723,GO:0034724,GO:0034728,GO:0035065,GO:0035066,GO:0036211,GO:0040029,GO:0042325,GO:0042393,GO:0043044,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043486,GO:0043543,GO:0043618,GO:0043620,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044703,GO:0044706,GO:0045814,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0048232,GO:0048468,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051704,GO:0051716,GO:0060255,GO:0060378,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070647,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:1901360,GO:1901564,GO:1901576,GO:1901983,GO:1901985,GO:1902275,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1905269,GO:2000112,GO:2000113,GO:2000756,GO:2000758,GO:2001141,GO:2001252
EggNOG free text desc.chromatin assembly or disassembly
EggNOG OGsCOG5137@1,KOG3265@2759
COG Functional cat.BK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHistone chaperone, ASF1-like
Ec32 orthologEc-12_004340.1
Exons5
Model size2179
Cds size1032
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815580.2804368-UTR-P-fluviatile_contig13:2770862..27717771622815580.2804368-UTR-P-fluviatile_contig13:2770862..2771777Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2770863..2771777 -
1693562331.8750932-UTR-P-fluviatile_contig13:2770862..27717771693562331.8750932-UTR-P-fluviatile_contig13:2770862..2771777Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2770863..2771777 -
1622815580.3573835-UTR-P-fluviatile_contig13:2774924..27751561622815580.3573835-UTR-P-fluviatile_contig13:2774924..2775156Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2774925..2775156 -
1693562332.2671301-UTR-P-fluviatile_contig13:2774924..27751561693562332.2671301-UTR-P-fluviatile_contig13:2774924..2775156Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2774925..2775156 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815580.2938309-CDS-P-fluviatile_contig13:2771777..27721821622815580.2938309-CDS-P-fluviatile_contig13:2771777..2772182Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2771778..2772182 -
1693562332.1984944-CDS-P-fluviatile_contig13:2771777..27721821693562332.1984944-CDS-P-fluviatile_contig13:2771777..2772182Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2771778..2772182 -
1622815580.3077238-CDS-P-fluviatile_contig13:2772460..27727061622815580.3077238-CDS-P-fluviatile_contig13:2772460..2772706Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2772461..2772706 -
1693562332.219392-CDS-P-fluviatile_contig13:2772460..27727061693562332.219392-CDS-P-fluviatile_contig13:2772460..2772706Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2772461..2772706 -
1622815580.318985-CDS-P-fluviatile_contig13:2773138..27732901622815580.318985-CDS-P-fluviatile_contig13:2773138..2773290Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2773139..2773290 -
1693562332.2313912-CDS-P-fluviatile_contig13:2773138..27732901693562332.2313912-CDS-P-fluviatile_contig13:2773138..2773290Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2773139..2773290 -
1622815580.3312948-CDS-P-fluviatile_contig13:2773785..27739051622815580.3312948-CDS-P-fluviatile_contig13:2773785..2773905Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2773786..2773905 -
1693562332.2415853-CDS-P-fluviatile_contig13:2773785..27739051693562332.2415853-CDS-P-fluviatile_contig13:2773785..2773905Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2773786..2773905 -
1622815580.3469274-CDS-P-fluviatile_contig13:2774815..27749241622815580.3469274-CDS-P-fluviatile_contig13:2774815..2774924Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2774816..2774924 -
1693562332.2517834-CDS-P-fluviatile_contig13:2774815..27749241693562332.2517834-CDS-P-fluviatile_contig13:2774815..2774924Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2774816..2774924 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1906.1prot_P-fluviatile_contig13.1906.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 2771778..2774924 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1906.1

>prot_P-fluviatile_contig13.1906.1 ID=prot_P-fluviatile_contig13.1906.1|Name=mRNA_P-fluviatile_contig13.1906.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=344bp
MSIVNVINVVVLDNPSSFGSPLTFEVTFECLEALDADLEWKVIYVGSAED
TRYDQVLEEVDVGPIPIGVNKFVLTAESPDPATIPPTDLVGVTVTLITCC
YKQREFIRVGYYVNNEHNDPAINAEIQEGRIPPAEMLDPAQITRNILADK
PRVTRFPIDWNAAPGEAGAAAAGADGAAAAAGEGDDEMGVDKAAEEGAEA
GARANTGGEVSDSMGSYGEDEGSMVDSEEGSGDGSGDGMADEGDADDMDA
DSSGAEEMEDLAGDEARAEAAAMIKAGEGSVTARVAPATGSQGVLSAASD
QRQNIQPVVALPSSGVGAHASTVGQVNCGGVATGIPAAPSTTV*
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mRNA from alignment at P-fluviatile_contig13:2770863..2775156-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1906.1 ID=mRNA_P-fluviatile_contig13.1906.1|Name=mRNA_P-fluviatile_contig13.1906.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4294bp|location=Sequence derived from alignment at P-fluviatile_contig13:2770863..2775156- (Porterinema fluviatile SAG_2381)
CTCTCATCATCAGGACCCAACGCTTGAGTTGATCGACGCTCTCTGTACTG
AGCTTCCACCGCTGCCGCGTTCGCGATACCTGGCCACGCCCACGAATATC
GATCTTGTTGGGCCAAGTGTGTGCTTACCCGAAAATTTGAAAACGAAGGC
CTTGACGCTCTCGCCCAGGAAAGCGTTGGGAAATCGGGACAGGCAACCAA
CCAGCTAGCGAGGAAGGGGAGACTGAGATAGGATGTCCATCGTGAACGTT
ATCAACGTCGTCGTCCTGGACAACCCATCATCGTTCGGAAGTCCGCTCAC
GTTCGAGGTTACGTTCGAATGCCTAGAGGCGTTAGATGCTGGTAAGCGCG
GAGGTTTTTGACGACTTTTCAAAAACGGGACTCAAGTTTCTTAAACGAGA
GTGAGATCGGAGGCGGTGCTCAGAAAGGCATTGGTGTGGTGTGTGTGTGC
GCTTGCGTAAATACCTGCACTTCCAACCACGCCACCGCATCTTTATTCAC
CGGAACAGCATACCGCAACCATGGGCGCCCTTGCTTGCGATGGGTTGTTT
ACCGCTGTTCGAGGTGCGCTGCGACACTCGCAATTCAATTTCAGTCGAGG
GCGAGAATGAGCGTGTGTCCGTCTCCCTTTCTCGCGGTCTATCCGCATTG
ATAACCACCCCTCCAAGAAAGGAGGTCTAGACTCTTGCTAGACTCTGTGT
TGGGCTTGATTTCAGTACTAGCCTCAGCTCAACCAAGAGGGAACACAGGG
TCCTGTGCATCAAAATGTCTGTTTCTGCGGCGTGGTTGATGTGGCTTGCG
CATTTCGTTGTGAGGAGCAGGATCCCCGCTACCTGAGGGTGGTGAGTTTT
GTAATCGCCTCCGCCTCAAAGGCGTGTGCGTTCTCCTACTTTTGTGGAGA
AGACTAACGAGGGGGGCCTGGGAATCCTTCGTAACTTCAAGGCGATTACT
TTTTCTTCTTCGAACCTCCACATTCAATCGTTGGTGTTTGCCAGTTCTGT
CTGGTGAAACAACTTTGGTGCACCTCCCCCACCCTCGGAGTGCGGAATGC
CGCGTGCCGAGGAAGCGAAGCGGCAGTGGGGGCAAGATTGAAGGTGGTCG
CGGCCGACACAATTCTTGTGCGAATGGCGCACTGGCCCACACACATGATG
TTTTTCAGCACGACAACAGCTCGAAACATCCTTGATTCCGGTCCGTTTTT
CTATCGTGTTTTCAAATCGTCGTTCGCGTGTGCCGCTTGCGCCTGCGACA
GATCTGGAGTGGAAGGTAATTTACGTAGGAAGCGCCGAGGACACCCGCTA
CGACCAGGTTTTGGAGGAGGTTGACGTTGGCCCCATACCAATCGGCGTTA
ACAAGTTCGTGCTCACAGCAGGTGGGATGATGGTGAATTGGCACCGAGTC
CGGTCAAATCCAATGCGCGAGGTGGGATGGGTGCAGGAGGAGCCCTTGAG
AATCAACGGACGTCCAATACTCCAACCCCTTGTCTCCCGTGCTAAGTTTT
TGTACTTCCGCCGCTTCCTTTCTTCCCAATGGCGTTGAGTCCGTACCGCG
GTATATTGCGGAACAAGAATGAGTCTGTTCGTGCCTCCTTGCTAGACCTC
CCTCGGGCCCCGCCCGTTTTTTCGTTCGGCTTTGTCCTCGTTCTCTTGCC
CTTGGGTGTGTTCGATGCATTTTTTTTTAAGTGGGCGTCGATCTTACCAA
CAGCTGAACATTTTGGGGCTACTGCTGTGGCTTCCTGCCGGTCCTTACCG
CCCGCTCCACCTGCCAGCTCTCTCGTTCTTACTAAACGTGAGACCTCGAC
GTCGCCTCGCTCGACGCCCTGCCTCTGTCTCCCTCTCTCTCGTTCATGTG
CCGTTATGCGCCGCAGAATCCCCCGACCCCGCGACGATCCCGCCAACAGA
TCTCGTGGGAGTGACGGTGACGCTCATCACATGCTGCTACAAGCAGAGAG
AATTTATACGCGTGGGCTACTACGTGAACAATGAACACAATGATCCAGCC
ATTAATGCAGAAATCCAGGTATGCGCGTCGTCTCGTGTGCATGACCGCTC
GTCGCCTCACCTTACGTTTTGGTCACTTGCCTTATTCTCTCAAGTGTGTT
TTATGCAGTTTTGGCTCGTTGTGGTTTTTGTGATGCGGCTGCGTTGCTCG
TTGTATTTTCAGTGTTGATGAAGGCGTGCGAGTTGAAAGCCAAAAAGGTG
CATTGGTGGGATCGGGAAGTAAGGGATGGCAGCAACGAAAGCGTTGTTTG
ACGGGGTTTTGTCGCAACGCGACCCATTCTCTGACGCCAAAATGTTCTCA
TCGTCGCCCGTCTTGGCCGTCTTGGAAATTGGATCTCCTCAACGAGTTGT
TACCCAACTAGATCCCCCGCAACTGCCAATGCACGCCGATTTTGCTTTGC
TATATCCCGTTGTTCGTGATGGCCGATCGACCGTCCCATCCCCCGCACAG
GAGGGCCGAATCCCGCCAGCTGAGATGCTAGACCCGGCGCAAATCACGCG
GAATATCCTGGCGGACAAGCCTCGCGTCACGCGCTTCCCGATCGACTGGA
ACGCCGCGCCCGGCGAGGCGGGTGCTGCGGCCGCCGGCGCCGACGGGGCG
GCAGCGGCAGCGGGCGAGGGCGACGACGAGATGGGGGTGGACAAGGCGGC
AGAGGAGGGGGCGGAGGCGGGAGCACGGGCGAACACAGGAGGAGAGGTGA
GAGTGGACGAGGAGACGCCTTCACGGGCGCTTGTATTGTTCATCGTAAGG
TCGACAGCGAAGAGATAGAGAAAGCTGCTGCTACGCATAGGTTGATGACG
GCCGCCGGGGTTCATCGCAGGACACACCGACAGACGGCTCTTGGGCTTAT
GAAGGGATATCCCTCTCCAAAAATCCTTGAAAAGCGTGGACTTGATAGTG
GAATTCCCTCCCCCCTCCCCCTTCCCTTCGGGCACCCCTACGCTGCTGTT
TGCTCTTCCTTCCGCCACCCACAGGTCTCTGACAGCATGGGGTCGTACGG
AGAAGACGAGGGGAGCATGGTCGACTCCGAGGAGGGGTCGGGGGACGGAT
CCGGAGATGGGATGGCCGACGAGGGCGACGCGGACGATATGGACGCAGAC
AGCTCGGGGGCGGAGGAGATGGAGGACCTGGCGGGGGACGAAGCAAGGGC
GGAAGCGGCGGCGATGATAAAGGCGGGGGAAGGGTCGGTGACGGCAAGGG
TCGCCCCGGCAACAGGATCGCAAGGGGTGTTGTCGGCAGCAAGCGACCAA
CGCCAGAACATCCAGCCGGTCGTCGCCTTGCCCAGCAGCGGAGTGGGAGC
GCACGCGTCAACGGTCGGGCAGGTCAATTGCGGCGGGGTGGCAACCGGGA
TACCCGCGGCACCGTCGACCACGGTGTAGGAAGGCCGGCGGGCGGGGTTG
GGGGGGCTGTACGCGTGTATTGAAGCAACAGTTCTGTGTGTTGTGGCCAT
TCGACCCGTCCGCCCCCTGGAGGGGGGCAGTGCGTTCTTGCGGGCATGGC
CGCGCAACCTTATGCCTCTGTTAGACCAACGTGAATCGGCTCGGACGGTT
GTTTGCCAAACGAGCTCCGGGGGCTCTATTGTGTGCTGATGCACCGGAAC
GTAGTATTTCCATTTCTGTGTCCTTTTGCTTTCGTCCCTGGTGTTTTTTA
CGTGTTAAGTCCAGACGATGGTAGCCCAGCTGGGATTCTTGGGTCCCGAG
AACCAACTCGTCGTCGCCAGCGGCCTCGGCAAGCGCGATTGAAGCACGAA
CGGAAATCGGCCGTTGAGGGCGGGTTGGGCGACAGATTTGCCGAGTTAAC
AATGTAGAGCAACACTAAACGCAGGCTCGCTCATTTTTGTGGGGCTGGGT
TCGTCAACCAGAACAGAACTGTCGGCTTGAACTGTACCTTGCCTGCTGGC
TGCTTCTTGAATGAGTACCGTGTTAAACTTGAGACAAAATCAGTCTTCTG
ATCATGTAAACCAAAACAGGGTGTGTAGCGCTCAAACGAAAACAGGGTGT
GACGCGCTCCCCCCGTATTGCTTTTGGAAGGTGATGGCGGGTTGAGGGGA
TTGAGTCTTCGCCCAGAAGAGAAACGCCTGTTCCCCGTGGATCATTTACG
CGAGTGCGTTCTCTTTTGTGCGGAGCACACGTAGGTTTGTTGTCTTCACA
AGTTTGCGCATACGACGGGCATAAAGGAAGAGAAGATAATAGTTTGGATG
ATGAGAAGAAACCATAAAGTCTATGCCTCATGTTGTGGACCCGAGCGCAT
CGGTGAGCATTCAAGTCGAAGACAAGCGCGACACGTGAACACGG
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:2770863..2775156-

>mRNA_P-fluviatile_contig13.1906.1 ID=mRNA_P-fluviatile_contig13.1906.1|Name=mRNA_P-fluviatile_contig13.1906.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2064bp|location=Sequence derived from alignment at P-fluviatile_contig13:2770863..2775156- (Porterinema fluviatile SAG_2381)
ATGTCCATCGTGAACGTTATCAACGTCGTCGTCCTGGACAACCCATCATC
GTTCGGAAGTCCGCTCACGTTCGAGGTTACGTTCGAATGCCTAGAGGCGT
TAGATGCTGATGTCCATCGTGAACGTTATCAACGTCGTCGTCCTGGACAA
CCCATCATCGTTCGGAAGTCCGCTCACGTTCGAGGTTACGTTCGAATGCC
TAGAGGCGTTAGATGCTGATCTGGAGTGGAAGGTAATTTACGTAGGAAGC
GCCGAGGACACCCGCTACGACCAGGTTTTGGAGGAGGTTGACGTTGGCCC
CATACCAATCGGCGTTAACAAGTTCGTGCTCACAGCAGATCTGGAGTGGA
AGGTAATTTACGTAGGAAGCGCCGAGGACACCCGCTACGACCAGGTTTTG
GAGGAGGTTGACGTTGGCCCCATACCAATCGGCGTTAACAAGTTCGTGCT
CACAGCAGAATCCCCCGACCCCGCGACGATCCCGCCAACAGATCTCGTGG
GAGTGACGGTGACGCTCATCACATGCTGCTACAAGCAGAGAGAATTTATA
CGCGTGGGCTACTACGTGAACAATGAACACAATGATCCAGCCATTAATGC
AGAAATCCAGAATCCCCCGACCCCGCGACGATCCCGCCAACAGATCTCGT
GGGAGTGACGGTGACGCTCATCACATGCTGCTACAAGCAGAGAGAATTTA
TACGCGTGGGCTACTACGTGAACAATGAACACAATGATCCAGCCATTAAT
GCAGAAATCCAGGAGGGCCGAATCCCGCCAGCTGAGATGCTAGACCCGGC
GCAAATCACGCGGAATATCCTGGCGGACAAGCCTCGCGTCACGCGCTTCC
CGATCGACTGGAACGCCGCGCCCGGCGAGGCGGGTGCTGCGGCCGCCGGC
GCCGACGGGGCGGCAGCGGCAGCGGGCGAGGGCGACGACGAGATGGGGGT
GGACAAGGCGGCAGAGGAGGGGGCGGAGGCGGGAGCACGGGCGAACACAG
GAGGAGAGGAGGGCCGAATCCCGCCAGCTGAGATGCTAGACCCGGCGCAA
ATCACGCGGAATATCCTGGCGGACAAGCCTCGCGTCACGCGCTTCCCGAT
CGACTGGAACGCCGCGCCCGGCGAGGCGGGTGCTGCGGCCGCCGGCGCCG
ACGGGGCGGCAGCGGCAGCGGGCGAGGGCGACGACGAGATGGGGGTGGAC
AAGGCGGCAGAGGAGGGGGCGGAGGCGGGAGCACGGGCGAACACAGGAGG
AGAGGTCTCTGACAGCATGGGGTCGTACGGAGAAGACGAGGGGAGCATGG
TCGACTCCGAGGAGGGGTCGGGGGACGGATCCGGAGATGGGATGGCCGAC
GAGGGCGACGCGGACGATATGGACGCAGACAGCTCGGGGGCGGAGGAGAT
GGAGGACCTGGCGGGGGACGAAGCAAGGGCGGAAGCGGCGGCGATGATAA
AGGCGGGGGAAGGGTCGGTGACGGCAAGGGTCGCCCCGGCAACAGGATCG
CAAGGGGTGTTGTCGGCAGCAAGCGACCAACGCCAGAACATCCAGCCGGT
CGTCGCCTTGCCCAGCAGCGGAGTGGGAGCGCACGCGTCAACGGTCGGGC
AGGTCAATTGCGGCGGGGTGGCAACCGGGATACCCGCGGCACCGTCGACC
ACGGTGTAGGTCTCTGACAGCATGGGGTCGTACGGAGAAGACGAGGGGAG
CATGGTCGACTCCGAGGAGGGGTCGGGGGACGGATCCGGAGATGGGATGG
CCGACGAGGGCGACGCGGACGATATGGACGCAGACAGCTCGGGGGCGGAG
GAGATGGAGGACCTGGCGGGGGACGAAGCAAGGGCGGAAGCGGCGGCGAT
GATAAAGGCGGGGGAAGGGTCGGTGACGGCAAGGGTCGCCCCGGCAACAG
GATCGCAAGGGGTGTTGTCGGCAGCAAGCGACCAACGCCAGAACATCCAG
CCGGTCGTCGCCTTGCCCAGCAGCGGAGTGGGAGCGCACGCGTCAACGGT
CGGGCAGGTCAATTGCGGCGGGGTGGCAACCGGGATACCCGCGGCACCGT
CGACCACGGTGTAG
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