mRNA_P-fluviatile_contig13.1891.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1891.1 vs. uniprot
Match: A0A6H5L6L5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6L5_9PHAE) HSP 1 Score: 396 bits (1017), Expect = 5.190e-115 Identity = 376/755 (49.80%), Postives = 422/755 (55.89%), Query Frame = 1
Query: 892 LHEAPEQAAGGEGAPGKEDGSVWSDKGTMSSPAPSPQGRGN--LRYGDHSDHGSDRADVRTRTPQQRPSPLSGGFTGATAGMAARGGGXXXXXXXXXXXXXXWEEGERRTRAASIMASNASMHVHDALSPATTPFGRLKEHQPHQXXXXXXXXXXXXXSCGGSGGSDSGSGQVTPASVTASTHSALSPRAAEPFSAAVGGGSGGGIGGTSARERRGFGGLLGMGGNNVGGQRGKGGRDDAEVGDLKAXXXXXXXXXXXXXXXXXDADDRRENEWISSLGRGRTLRGQEAELKTVAQQLKRQKAAAAERXXXXXXXXXXXXXXXXXEKKVFLANLEQLERTVKDREREADEARSALASLEAFAIEREDTVTRLTQEKKELLEELEGARSGQDRSAEEVREALTRAEXXXEEVEARHRSWMRQAQARQTELEATAAQLAEALAEANRKXXXXXXXXXXXXXXXGMHGNGEGSRHG-GVEGGVRARAADRELRALHDELDSSQASLELEQERXXXXXXXXXXXXXXXXXXXAAEAVAERQMQEHSKMAAESL---AKVARLEQQLQHEKARANRLGASVPLPSGPESQIQALSSKLLDKHARLEESVRARTALSAKLKEATHRAFRAEQELRELLGESLEAGGVEGDG-------AGLVRPRRGRQDRSSLGRTSTGSWSRLAPIAKHKKIASVVDVLDRQTLQGVVFLRSSSMARAVFLAYLLLIHIWAFAVLSIHSSHLDHMKHPATLSGNENHGH 3117
L EA AAGG APGKEDGSVWSDKGT+SS APSP GRG + YGD D+ DV XXXXXXXXX R AS+ S + + V P TTP G XXXXXXXXXXXXX GG RERRG GGLLGMG N G G+G RDD E L+A XXXXXXXX DA+DR QEAELKT A++LKRQKAAAA XXXXXXX EKKVFL NLE ER +K +EREADEAR+AL+ +E FA+ERE XXX E+EARHR WMRQAQARQTELEATAAQLA ALAEANRK G GEG+R G G GG AR +DRE RAL DELDS QASLELEQER A EAV ERQ QEH+KMAA+S +K +RLEQQLQ E+A A RL ASVP P+GPE+QIQALSSKLL+K ARLEESV RT L+AKL+EA+ RAFRAEQELRE GE+LEAGG G++R RRGRQ RSS + G+WSR PIAKHKKIAS VDVLDRQTL+ VVFLR+SS+ARA FLAYLLL+H+W FAV+ +HSS L+H+KHPA SGN +HGH
Sbjct: 266 LGEATGLAAGGGAAPGKEDGSVWSDKGTVSSAAPSPLGRGGHGVSYGDERDN-----DVGXXXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXXXXXXXXXXRGASVKPSASRVGV--TPFPGTTPPGHRHXXXXXXXXXXXXXXXXXXXXXXX---------------XXXXXXXXXXXXXXXXXXXXXGG-----------RERRGLGGLLGMGRGNKG-AAGRGSRDDDEEA-LRAEAEDXXXXXXXXSLELEDAEDR--------------XXXQEAELKTGAEKLKRQKAAAAXXXXXXXXXMEEFRVLQLEEKKVFLNNLEAAERKLKKKEREADEARAALSVVEVFAMEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEARHRVWMRQAQARQTELEATAAQLAAALAEANRKKHQPGAEESG--------GEGEGARRGDGAHGG--ARTSDREFRALADELDSCQASLELEQERTRSLQQEVGLLKHDLDSARATEAVVERQRQEHAKMAADSFGKCSKASRLEQQLQQERASAKRLEASVPTPAGPEAQIQALSSKLLEKQARLEESVTERTTLTAKLREASDRAFRAEQELRESRGETLEAGGXXXXXXXXXXXXVGVMRARRGRQGRSS---PTAGTWSRFGPIAKHKKIASAVDVLDRQTLKTVVFLRNSSVARAAFLAYLLLLHLWTFAVVGLHSSTLNHIKHPAEHSGNVDHGH 950
BLAST of mRNA_P-fluviatile_contig13.1891.1 vs. uniprot
Match: D8LSA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSA0_ECTSI) HSP 1 Score: 373 bits (958), Expect = 2.980e-107 Identity = 354/745 (47.52%), Postives = 404/745 (54.23%), Query Frame = 1
Query: 931 APGKEDGSVWSDKGTMSSPAPSPQGRGN---LRYGDHSDHGSDRADVRTRTPQQRPSPLSGGFTGATAGMAARGGGXXXXXXXXXXXXXXWEEGERRTRAASIMASNASMHVHDALSPATTPFGRLKEHQ-----PHQXXXXXXXXXXXXXSCGGSGGSDSGSGQVTPASVTASTHSALSPRAAEPFSAAVGGGSGGGIGGTSARERRGFGGLLGMGGNNVGGQRGKGGRDDAEVGDLKAXXXXXXXXXXXXXXXXXDADDRRENEWISSLGRGRTLRGQEAELKTVAQQLKRQKAAAAERXXXXXXXXXXXXXXXXXEKKVFLANLEQLERTVKDREREADEARSALASLEAFAIEREDTVTRLTQEKKELLEELEGARSGQDRSAEEVREALTRAEXXXEEVEARHRSWMRQAQARQTELEATAAQLAEALAEANRKXXXXXXXXXXXXXXXGMHGNGEGSRHGGVEGGVRARAADRELRALHDELDSSQASLELEQERXXXXXXXXXXXXXXXXXXXAAEAVAERQMQEHSKMAAESLAKVARLEQQLQHEKARANRLGASVPLPSGPESQIQALSSKLLDKHARLEESVRARTALSAKLKEATHRAFRAEQELRELLGESLEAGGVEGDG--------AGLVRPRRGRQDRSSLGRTSTGSWSRLAPIAKHKKIASVVDVLDRQTLQGVVFLRSSSMARAVFLAYLLLIHIWAFAVLSIHSSHLDHMKHPATLSGNENHGH 3117
APGKEDGSVWSDKGT+SS APSP GRG + YGD+ D+ DV XXXXXXXX AS+ AS + + V L P TTP G PH+ SG V SV + + S RERRG GGLLGMG N G G+G RD E L+A XXXXXXXXXXXX DA+DR KT A+QLKRQK AAAER EKKVFL NLE E+ ++++ER+ADEAR+AL++LEA A+ERED XXX EVEARHR+WMRQAQARQTELEATAAQLA A NRK XXXXXXXXXXXX R +DRE RAL DELDS QASLELEQER A EAV ERQ QEH+KMAA+S AK +RLEQQLQ E+A A RL ASVP P+GPE+QIQALSSKLLDK ARLEESV RT L+AKL+EA+ RAFRAEQELRE GE+LEAGG G++R RRGRQ R S + G+WSRL PIAKHKKIAS VDVLDRQTL+ VVFLR+SS+ARA FLAYLLL+H+ AFA++ +HSS L+ +KHPA SGN NHGH
Sbjct: 240 APGKEDGSVWSDKGTVSSAAPSPLGRGGGHGVSYGDNRDND----DVGXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXASVKASASRVGV--TLFPGTTPPGHRHXXXXXXXLPHRRQE---------------------SGDVDAGSVPSPPDAGYSXXXXXXXXXXXX---------XXGRERRGLGGLLGMGRGNKG-AAGRGNRDGDEEA-LRAEAEDXXXXXXXXXXXXEDAEDRXXXXXXXX--------------KTGAEQLKRQKVAAAERQRTMEAEMEQFRVLQLEEKKVFLNNLEAAEQKLQEKERDADEARAALSALEALAMEREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVEARHRAWMRQAQARQTELEATAAQLAAAXXXXNRKKHQXXXXXXXXXXXXXXX---------XXXXXXXVRTSDREFRALADELDSCQASLELEQERTRSLKQEVDLLKHDLDSARATEAVVERQRQEHAKMAADSFAKASRLEQQLQQERASAKRLEASVPTPAGPEAQIQALSSKLLDKQARLEESVTERTTLAAKLREASDRAFRAEQELRESRGETLEAGGXXXXXXXXXXXXXVGVMRARRGRQGRGS---PTAGTWSRLGPIAKHKKIASAVDVLDRQTLKIVVFLRNSSVARAAFLAYLLLLHLSAFALVGLHSSTLNPIKHPAEHSGNINHGH 911
BLAST of mRNA_P-fluviatile_contig13.1891.1 vs. uniprot
Match: A0A7R9U461_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U461_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.590e-11 Identity = 108/393 (27.48%), Postives = 180/393 (45.80%), Query Frame = 1
Query: 1918 EREADEARSALASLEAFAIEREDTVTRLTQEKKELLEELEGARSGQDRSAEEVREALTRAEXXXEEVEARHRSWMRQAQARQTELEATAAQLAEALAEANRKXXXXXXXXXXXXXXXGMHGNGEGSRHGGV--------EGGVRARAADRELRALHDELDSSQASLELEQERXXXXXXXXXXXXXXXXXXXAAEAVAERQMQEHSKMA---AESLAKVARLEQQLQHEKARANRLGASVPLPSGPESQIQALSSKLLDKHARLEESVRARTALSAKLKEATHRAFRAEQELRELLGESLEAGGVEGD--GAGLVRPRRGRQDRSSLGRTSTGSWSRLAPIAKHKKIASVVDVLDRQTLQGVVFLRSSSMARAVFLAYLLLIHIWAFAVLSIHS 3057
++EADEA++AL + EA + +E+ E L+ +E R+ + + VR + E EE+EA+H S MR + R+ ELE T +L LA+ R + G+G+ GG+ E + A A R R +EL + ELE+ R + A R+ + SK+ +E + LE QL+ ++ RA+ G E +I+A++ +L+ K L+E+ + AL A+L A R + E ++++ + + A G + D GL R R+ S L L P+ K + ++ VD LDR L LR++++ARAVFLAYL ++H+W F +++ H+
Sbjct: 263 QKEADEAKTALEAKEAEIERLAGALAEKEKEQAEALQTIEELRTMGSQGMQGVRAEVRVLESKIEEMEAQHSSAMRTLRRREAELERTNTELTRTLADKERAISA-------------LRGSGQDDFSGGLPDADSLLREEAIAASTALRSERQKCEELGA-----ELEKARADLFQQTTLLEEQLS----STTAALRREEAQRSKLEGLLSERDGTLKSLEGQLR-DQGRASARGRXDARGEVVEERIKAMTEQLMKKQLALDEANCEKAALRARLGAAATRITKLEGDVQKYMSTAASAYGDDEDVEEGGLRRRRKAHTSISVL----------LKPVTKSEGVSKAVDSLDRFVLYTGRVLRANAVARAVFLAYLFMLHLWTFTLIAFHT 622 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1891.1 >prot_P-fluviatile_contig13.1891.1 ID=prot_P-fluviatile_contig13.1891.1|Name=mRNA_P-fluviatile_contig13.1891.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=971bp MSRFIKYASNLLDGVDNMAKDSLTDQDIAAAAAERRRRRRQLRKDSSSRYback to top mRNA from alignment at P-fluviatile_contig13:2638850..2650233+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1891.1 ID=mRNA_P-fluviatile_contig13.1891.1|Name=mRNA_P-fluviatile_contig13.1891.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11384bp|location=Sequence derived from alignment at P-fluviatile_contig13:2638850..2650233+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:2638850..2650233+ >mRNA_P-fluviatile_contig13.1891.1 ID=mRNA_P-fluviatile_contig13.1891.1|Name=mRNA_P-fluviatile_contig13.1891.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5826bp|location=Sequence derived from alignment at P-fluviatile_contig13:2638850..2650233+ (Porterinema fluviatile SAG_2381)back to top |