mRNA_P-fluviatile_contig13.1871.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1871.1 vs. uniprot
Match: A0A6H5JJD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJD0_9PHAE) HSP 1 Score: 1098 bits (2840), Expect = 0.000e+0 Identity = 693/1208 (57.37%), Postives = 780/1208 (64.57%), Query Frame = 1
Query: 34 GARMGRQQRNSSRANLVV-LMAVALADGTATAGLEPGMLSPLAQLTVVTGEVERDDLYYFQVLTEAWQSTRVRVSIEDCTPRTAVIASFGSEPTPSQHELLAHAMLDLSGNGTCGVDVISRPSYSRDGIWHFAVVGGSPLRGDRYFAGPPDTLTFEAAIISEGAVYPTLDRGVAEPGECLWKAATPPVVVPTITGSPGSYSSSQEGGGSAKSWRRDFLPTLGRFPAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSWLGAFMVSQDDEVVSVPFEVAALVGGKNAXXXXXXXXXGRVRGLGVEVEEDDLTGSKASGV-----NEGDEGIPTSSGEWLRSRQPGGQKQRWRRRRQRRSFEDLEEEPAGFGEWNEDFVAAGGREFGEMDGNGAGG--------GREMWAGDEERKLNLDDNGCEVMVCAAAARIPSRFEQEGADGTNDAGSAAAGDEGRQSICKSILVKGAGVAVSGVLDLPDKPQTGRWYLTAHAACDDAASTGGHRRRLIEAAEKSEIQNDTDEATAAAEVEEAEEKEEDLKVRGGRMT-------------VLSTAGEEPEEKSIYTGSGWGLEVMSLQRDWAHVEWNADFLVPDEGGVGPG----------GTGGEEEAAGCLSAACGDDAFVIRAVAIAEACPRGAVGVSGVDLLLLSPSS------GAAAAATSAQRFSCVGTELPMLMRRDGAARVHEGQPQALSNYVRDEGGAAXXXXXXXXXXXVAGGXHGKEAGXXXXXXXXE-APRWLWLGPGPPSLWFALEMSGREVGASMEVRLSVNSSAPLPVASYGRGSGR-----SPQPAWRMGPGVG-RIGGXXXXXXXXXXXXXXXEGQETSLYPPAIVEAADSLNLSVAMRVGALPVVEPNGTARDGTVILWTADALSEPRVPQDGYDGEVSAAVTGTGARTAAGTDSSPGWSTTFTWNLTHPPPLHPATVGGGAGLGRGTAATTLFIVVSAETPAEASRRPRRYPAXXXXXXXXXXKTRRRGTAESGAGSRAEAGREDGGVGGSDLLWTLGVAPQVTFSYCDENVCPVGRGECRAARGGSGDDYVTISKCYCFYGYGGEACAQRVVSYVSMLWQFCLLVLSNLAVVPAVRLALRLGAATGAAPAVVLGLNGAASALYHMCDLELTCAGGLLSFHTLQALDFFFSFFSVAALVLHLCPMPWDDLLVASSTYSGL 3507
GAR RQ +A LV L+AV AGLEP MLSPLAQLT++ +VERDD++YFQVLTEAWQSTRVRVSIEDCTPRTAVIA+FG+EPTPS+HELLAHAM DL+GNGTCGVDVI+RPSYSRDG+WHFAVVGGSPLRGDRYFAGPPDTL F+AA+I++ AVYPTLDRGVA G+CL K A PPVVVPTITG PGS S S+ GGG + R FLPTLGRFPAGG PSWLGAF +S DE V++PFEVAA+V G + XXXXXX G G + L + + V + G L E AG+G+ GR G+ G G GG GRE EER L+ DD GCEV VCAAAARI ++ DG + + G+Q +C+S++V G G AVSG LDLPD+PQTGRWYLTA AAC+ A T GH++R + +S + D +AA++ +E + GG + G+E EEK+IY+G+GWGLEVMSLQRDWAHVEW+ADFLVPD GG G G G GG E C SAA G DAFV RA A EACPRGAVGV GVDL ++ ++ GAAAAA + RFSCVG ELPMLMRRDGAAR+HEGQP+ALSN+VRDEGGAAXXXXXXXXXXX X XXXXXXXX AP WLW GPGPPSLW+ALEMSGREVGASM++RLSVNSSAPL A+ SP AW MGP R GG + VE A S+NLSVAMRVGALPVV+PNGTAR+GTV+LWTADALSEP D P WSTTFTWNLTHPPPLHPA VGGGAGLGRGTAATTLF+VVS ET AEAS R +RY RR E E G GG LWTLGVAP+VTF YCDE+VCPVGRGECRAARGGSGDDYVT+SKCYCFYGYGGEAC QRVVSYVS+LWQFCLLVLSNLAVVPAVR+ALRLG ATGAAPAVVLGLNGAASA YHMCDLELTCAGG+LSFH+LQALDFFFSFFSVAALVLHLCPMPWD+ LV S S L
Sbjct: 5 GARRCRQGSALLKACLVSSLLAVEPTVADEAAGLEPSMLSPLAQLTLIDAQVERDDIHYFQVLTEAWQSTRVRVSIEDCTPRTAVIAAFGAEPTPSRHELLAHAMPDLAGNGTCGVDVITRPSYSRDGVWHFAVVGGSPLRGDRYFAGPPDTLAFQAAVIADSAVYPTLDRGVAASGDCLRKVAVPPVVVPTITGPPGS-SVSRRGGGXGQGSRGSFLPTLGRFPAGGAAEKTEGKDRGGGDGEEEDARHAAAATALLLS-PSWLGAFTLSAYDESVTIPFEVAAIVDGGSEADGXXXXXXXXXXGTGQGLVGRALGANGTADVKLLTTDYGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTERAAGYGQGK-------GRAAGDQSGAGDGGEEKEETHQGRE-----EERSLDNDDGGCEVTVCAAAARIVLGIGEQDDDGDAEVPQEDSSVGGQQRVCRSVVVGGQGAAVSGTLDLPDRPQTGRWYLTARAACEAAPGTAGHKQRSLR---RSTVGADVPTTSAASQ-------DEGVPGTGGGVPSXXXXXXXXXXXXXXXXVGQEVEEKNIYSGTGWGLEVMSLQRDWAHVEWSADFLVPD-GGDGGGDARRGGDDGKGEGGREA---CTSAAGGKDAFVFRAAAFTEACPRGAVGVGGVDLRPVTAAAEAGVGDGAAAAARESHRFSCVGAELPMLMRRDGAARIHEGQPRALSNFVRDEGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSWLWQGPGPPSLWYALEMSGREVGASMQIRLSVNSSAPLTTAAXXXXXXXXXAHGSPS-AWHMGPRFSSRSGGDAGGGDGG-----------APVVQSVPVEDASSMNLSVAMRVGALPVVDPNGTAREGTVVLWTADALSEPGEANDRPXXXXXXXXXXXXXXXXXXXXDLPWWSTTFTWNLTHPPPLHPAAVGGGAGLGRGTAATTLFVVVSGETEAEASGRAKRYEGVGPPGGRDGMIRRRAAERE------VEQGEGGGGDEVGVSLWTLGVAPEVTFRYCDEDVCPVGRGECRAARGGSGDDYVTVSKCYCFYGYGGEACGQRVVSYVSLLWQFCLLVLSNLAVVPAVRVALRLGLATGAAPAVVLGLNGAASAFYHMCDLELTCAGGMLSFHSLQALDFFFSFFSVAALVLHLCPMPWDEPLVCSPPPSSL 1166
BLAST of mRNA_P-fluviatile_contig13.1871.1 vs. uniprot
Match: D8LS70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS70_ECTSI) HSP 1 Score: 672 bits (1734), Expect = 8.950e-217 Identity = 397/617 (64.34%), Postives = 431/617 (69.85%), Query Frame = 1
Query: 1732 MSLQRDWAHVEWNADFLVPDEGGVGPGGTGGEEEAAG------CLSAACGDDAFVIRAVAIAEACPRGAVGVSGVDLLLLSPSSGA---------AAAATSAQRFSCVGTELPMLMRRDGAARVHEGQPQALSNYVRDEGGAAXXXXXXXXXXXVAGGXHGKEAGXXXXXXXXEAPRWLWLGPGPPSLWFALEMSGREVGASMEVRLSVNSSAPL---PVASYGRGSGRSPQPAWRMGP-----GVGRIGGXXXXXXXXXXXXXXXEGQETSLYPPAIVEAADSLNLSVAMRVGALPVVEPNGTARDGTVILWTADALSEPRVPQDG----YDGEVSAAVTGTGARTAAGTDSSPGWSTTFTWNLTHPPPLHPATVGGGAGLGRGTAATTLFIVVSAETPAEASRRPRRYPAXXXXXXXXXXKTRRRGTAESGAGSRAEAGREDGGVGGSD----LLWTLGVAPQVTFSYCDENVCPVGRGECRAARGGSGDDYVTISKCYCFYGYGGEACAQRVVSYVSMLWQFCLLVLSNLAVVPAVRLALRLGAATGAAPAVVLGLNGAASALYHMCDLELTCAGGLLSFHTLQALDFFFSFFSVAALVLHLCPMPWDDLLVAS 3489
MSLQRDWAHVEW+ADFLVPD G G G ++ G C SAA G+DAFV RA A EACPRGAVGV GVDL ++ ++ A AAAAT + RFSCVG ELPMLMRRDGAAR+HEGQP+ALSN+VRDEGGAA X X XXXXXX +APRWLW GPGPPSLW+ALEMSGREVGASME+RLSVNSSAPL A+ S AW MGP VG GG G + VE A S+NLSVAMRVGALPVV+PNGTAR+GTV+LWTADALSEP D YD + AAG P WSTTFTWNLTHPPPLHPA VGGGAGLGRGTAATTLF+VVS ET AEAS R +RY K RRR AE E+G GG D LWTLGVAP+VTF YCDE+VCP+GRGECRAARGGSGDDYVT+SKCYCFYGYGGEAC QRVVSYVS+LWQFCLLVLSNLAVVPAVR+ALRLG ATGAAPAVVLGLNGAASA YHMCDLELTCAGG+LSFH+LQALDFFFSFFSVAALVLHLCPMPWD+ LV S
Sbjct: 1 MSLQRDWAHVEWSADFLVPDVGDGGGDARRGGDDGKGEGGREACTSAAGGEDAFVFRAAAFTEACPRGAVGVGGVDLRPVTAAAEAGFGEGAAATAAAATESHRFSCVGAELPMLMRRDGAARIHEGQPRALSNFVRDEGGAAAAVAGLSESGXXXXXXXXXXX-XXXXXXAKQAPRWLWRGPGPPSLWYALEMSGREVGASMEIRLSVNSSAPLMTTATAAAASLSAHGSPSAWHMGPRFSSPSVGDAGGG---------------GGGAPVVQSVPVENASSMNLSVAMRVGALPVVDPNGTAREGTVVLWTADALSEPGEASDRPPPPYDD----------SSDAAGAADLPWWSTTFTWNLTHPPPLHPAAVGGGAGLGRGTAATTLFVVVSGETEAEASGRAKRY-GGVGSTGGRDGKLRRRA---------AEREVEEGEGGGGDEVGVSLWTLGVAPEVTFRYCDEDVCPIGRGECRAARGGSGDDYVTVSKCYCFYGYGGEACGQRVVSYVSLLWQFCLLVLSNLAVVPAVRVALRLGLATGAAPAVVLGLNGAASAFYHMCDLELTCAGGMLSFHSLQALDFFFSFFSVAALVLHLCPMPWDEPLVRS 581
BLAST of mRNA_P-fluviatile_contig13.1871.1 vs. uniprot
Match: D8LS69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS69_ECTSI) HSP 1 Score: 321 bits (823), Expect = 1.150e-97 Identity = 159/207 (76.81%), Postives = 178/207 (85.99%), Query Frame = 1
Query: 88 LMAVALADGTATAGLEPGMLSPLAQLTVVTGEVERDDLYYFQVLTEAWQSTRVRVSIEDCTPRTAVIASFGSEPTPSQHELLAHAMLDLSGNGTCGVDVISRPSYSRDGIWHFAVVGGSPLRGDRYFAGPPDTLTFEAAIISEGAVYPTLDRGVAEPGECLWKAATPPVVVPTITGSPGSYSSSQEGGGSAKSWRRDFLPTLGRFPA 708
L+AV L AGLEP MLSPLAQLT++ +VERDD+YYFQVLTEAWQSTRVRVSIEDCTPRTAVIA+FG+EPTPS+HELLAHAM D++GNGTCGVDVI+RPSYSRDG+WHFAVVGGSPLRGDRYFAGP DTL F+AA+I++ AVYPTLDRGVA G+CL K A PPVVVPTITG PGS +S + GGG S R FLPTLGRFPA
Sbjct: 24 LLAVELTLADEAAGLEPSMLSPLAQLTLIDAQVERDDMYYFQVLTEAWQSTRVRVSIEDCTPRTAVIAAFGAEPTPSRHELLAHAMPDVAGNGTCGVDVITRPSYSRDGVWHFAVVGGSPLRGDRYFAGPADTLAFQAAVIADSAVYPTLDRGVAASGDCLRKVAVPPVVVPTITGPPGSSASRRVGGGGQGS-RGSFLPTLGRFPA 229
BLAST of mRNA_P-fluviatile_contig13.1871.1 vs. uniprot
Match: A0A835Z3I3_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3I3_9STRA) HSP 1 Score: 117 bits (293), Expect = 6.900e-23 Identity = 68/162 (41.98%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 3022 VAPQVTFSYCDENVCPVGRGECRAARGGSGDDYVTISKCYCFYGYGGEACAQRVVSYVSMLWQFCLLVLSNLAVVPAVRLALRLGAATGAA--PAVVLGLNGAASALYHMCDLELTCAGGLLSFHTLQALDFFFSFFSVAALVLHLCPMPWDDLLVASSTYS 3501
V P V+F+ C CP +G C + G + + V + CYC YG+GGE CA R+VS ++ Q LVL+NLAVVP+V LA RL T +A P V G+ GA+SALYH+CD+ + C GGL + +Q+LD FS+ S AA+ +L P + + Y+
Sbjct: 540 VQPMVSFTRCSSQACPQSKGSCSVSMGTA--EGVLVGTCYCKYGWGGEGCADRLVSTQTIALQAAALVLTNLAVVPSVVLAYRLRKVTDSAAGPGAVFGVAGASSALYHLCDIGIACIGGL-RYGAIQSLDILFSYMSSAAVATYLAYWPPGTSYLVPALYT 698 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1871.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1871.1 >prot_P-fluviatile_contig13.1871.1 ID=prot_P-fluviatile_contig13.1871.1|Name=mRNA_P-fluviatile_contig13.1871.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1305bp CNTDSTRGRGGGARMGRQQRNSSRANLVVLMAVALADGTATAGLEPGMLSback to top mRNA from alignment at P-fluviatile_contig13:2388658..2400554+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1871.1 ID=mRNA_P-fluviatile_contig13.1871.1|Name=mRNA_P-fluviatile_contig13.1871.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11897bp|location=Sequence derived from alignment at P-fluviatile_contig13:2388658..2400554+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:2388658..2400554+ >mRNA_P-fluviatile_contig13.1871.1 ID=mRNA_P-fluviatile_contig13.1871.1|Name=mRNA_P-fluviatile_contig13.1871.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=7830bp|location=Sequence derived from alignment at P-fluviatile_contig13:2388658..2400554+ (Porterinema fluviatile SAG_2381)back to top |