mRNA_P-fluviatile_contig13.1855.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: D8LTZ2_ECTSI (DNA polymerase alpha subunit B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTZ2_ECTSI) HSP 1 Score: 1117 bits (2890), Expect = 0.000e+0 Identity = 587/703 (83.50%), Postives = 634/703 (90.18%), Query Frame = 1
Query: 157 MAAVTEAQVARSFSKIGEDPSDKDFIGKCVSLCQRFSLSASDLADHWESFAVNHDGSKLEMASWASFETEVAKSKAAET----AXXXXXXXXXXXXXXXXXXXXXSIVTPRSAGRRVVNMVSSEDLSTPYSSSSAVSKRHLLPFSSPDP--RSKIARQDGGDDDGAAGLSPTSVQSPPDLARAVYAERKNAGQKVTSHNPALGLRGLAVPASPRKAGTRCDIRVDEAVGAPARYRYMYTPLEERAASLEKCLLALQGQMESRFGLTEVTPVGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLRELQSFALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDIPKTGG-----------SARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQLDMRHAQRWGMPSTPDVLLVPSRLAQFAREVQGCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
MAAVTE++VA SFSKIGEDPSDKDFIGKCVSLCQRFSLSA DLADHWESFAVNHDGS+L M+SWA FETEVAKSKAA + A XXXXXX XXXXXXXX IVTPR AGRRVVN V+SEDL+ S+ +KR +LPFSSP+P RSK+ARQDG DGA+ LSPTSVQSPPDL RAVY+ RKNAGQK S+NPALGLRGL+V SPR+AGTRCD+ VD AVGAPARYRYMYTPLEERAA+LEK L+ALQGQME +FGLTE+TPVGVPRQEQVV VGR+CCES EGK+NRASI+LEGSRRDSSGQR HLDLRELQSFALFPGQVVA+QGVN SGGRMVARG+I+GVPRPLP+S+PS+L+R QHGA+L GGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVR ARPDVVVLMGPFVD+EHP VA+GDATIECVDGGSESVDFETLFRLRLSEKLD LFA DRDLPTQF+LVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLD+PKTG +ARQKRVHLAPNPAWL VNEVTIGVSSTDALFDLSG+EVSAGG+GTNRLARLAGH+LQQQSFYPLFPPPAGSAAQLDMRHA RWGMP+TPDVLLVPSRLAQFAR+VQGCLCVNPGQL+KGTGGGTYAELAVHPMPQE LAKKQEELADKPDAT+ HDVA+R+CVEIRRI
Sbjct: 1 MAAVTESEVAGSFSKIGEDPSDKDFIGKCVSLCQRFSLSAGDLADHWESFAVNHDGSRLGMSSWAGFETEVAKSKAAASTPPAASTGTASXXXXXXRXXXXXXXXXIVTPRPAGRRVVNTVTSEDLA------SSGTKRPMLPFSSPNPKARSKLARQDGEGGDGAS-LSPTSVQSPPDLVRAVYSSRKNAGQKTASYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERKFGLTEITPVGVPRQEQVVAVGRVCCESTEGKINRASILLEGSRRDSSGQRAHLDLRELQSFALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRAQHGAELGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDSEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDKLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGARTTSGGASAAAAARQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQGCLCVNPGQLSKGTGGGTYAELAVHPMPQETLAKKQEELADKPDATVEHDVAKRTCVEIRRI 696
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: A0A836CA88_9STRA (DNA polymerase alpha subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA88_9STRA) HSP 1 Score: 508 bits (1309), Expect = 1.510e-163 Identity = 312/723 (43.15%), Postives = 406/723 (56.15%), Query Frame = 1
Query: 157 MAAVTEAQVARSF------SKIGEDPSDKDFIGKCVSLCQRFSLSASDLADHWESFAVNHDGSKLEMASWASFETEVAKSKAAETAXXXXXXXXXXXXXXXXXXXXXS--IVTPRSAGRRVVNMVSSED-------LSTPYSSSSAVSKRHLLPFSSPDP-----RSKIARQDGGDDDGAAGLSPTSVQSPPDLARAVYAERKNAGQKVTSHNPALGLRGLAVPASPRKAGT-----RCDIRVDEAVGAPARYRYMYTPLEERAASLEKCLLALQGQMESRFGLTEVTPVGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLRELQSFALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGG---------SESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDIPKTGGSARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQLDMRHAQRWGMP---STPDVLLVPSRLAQFAREVQGCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
MAAV+ +V ++F +++ S D + CVSLC RFSL DLA+ WE++A N +KL A A +AK A+ ++ S ++T SA R + V S +S P S+ + ++ FSSP P ++ +A + GG + P +A YA+R NAG +V +NP+ + A+ A RC + VGA ARYRYM+ PLEER+ E LLA ++ L E+TPVGVPRQE+V VVGR+ CES EG+M RAS +LEGS RDS G R L L L SFALFPGQ+VA +G+NS G RM RG++ G P P P+ AAGP+TT D+L YEPLNDLL V+ RPDVVVLMGPFVDAEHP++AAG A + V GG +E VDFETLFRLR+ +KL+ + A D PTQF+L+PS RD FH+ YPQPPF D V GG LG+G Y ++ ++ L +P R RV PNPA V +S D+LFDLS EE + G G RLARLA H+LQQ+SFYPL P AG LD R A + + PDVLL+P RLAQFAR+V+GC+CVNPG L +G GGGTYA LA+HP+P+ A+ + D PD +PH VA+R+ +E+RRI
Sbjct: 1 MAAVSSTEVLQAFKSRVQKAELTALESQPDLLESCVSLCTRFSLKVDDLANEWEAYACNDQAAKLSSAGLAQLTALLAKRSASSSSARKPPQPSSAPRRLVTARPTVSPPLLTKESAARALATPVPSHLKRPLPGLMSPPGSTVNKAARTGAGGFSSPAPSLSVQQTPVAARSGGGXXXXXXXXXXAAHMP----QAAYADRANAGARVLEYNPSKLMHAGAIAAXXXXXXXXXXRQRCSVEPICGVGAAARYRYMFAPLEERSRLQEAALLAATAELARAHALGELTPVGVPRQEEVTVVGRVVCESGEGRMGRASALLEGSWRDSGGARAALALDALPSFALFPGQIVAARGINSGGMRMAVRGLLPGSPAP-----PAXXXXXXXXXXXXXXXXXXXXVAAGPYTTDDNLEYEPLNDLLAHVQETRPDVVVLMGPFVDAEHPLIAAGAAALP-VPGGXXXXXXXDAAEPVDFETLFRLRVCDKLERVLA-DPAHPTQFVLIPSTRDAFHDATYPQPPFADAVAGGAPLGIGEYADDAVYTLGLP------RDARVACLPNPAAFAVGGAVFAATSADSLFDLSCEEAAGGAGGAPRLARLADHLLQQRSFYPLRPARAG--VPLDPRRAAALALAPRGAAPDVLLLPGRLAQFARDVRGCVCVNPGALTRGGGGGTYAALALHPLPR---AELEAAARDAPDIAVPHGVAQRTALEVRRI 701
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: W7TPC9_9STRA (DNA polymerase alpha subunit B n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPC9_9STRA) HSP 1 Score: 493 bits (1268), Expect = 8.670e-158 Identity = 315/739 (42.63%), Postives = 417/739 (56.43%), Query Frame = 1
Query: 148 TSAMAAVTEAQVARSFSKIGEDPSDK-DFIGKCVSLCQRFSLSASDLADHWESFAVNH---DGSK--LEMASWASFETEVAKSKAAETAXXXXXXXXXXXXXXXXXXXXXSIVTPRSAGRRVVNMVSSEDLSTPYSSSSAVSKRHLLP--------------FSSPDPRSKIARQDGGDDDGAAGLSPTSVQSPPDLARA--------------------------VYAERKNAGQKVTSHNPALGLRGLAVPASPRKAGTRCDIRVDEAVGAPARYRYMYTPLEERAASLEKCLLALQGQMESRFGL---TEVTPVGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLRELQSFALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDIP-KTGGSARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQLDMRHAQRWGMPSTPDVLLVPSRLAQFAREVQGCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
T +AV E +V +F +I ED K + + KC+S+ LSA DLA+ WE+ A+N D S+ L ++S S E ++K + VTP ++ RR +S D ST S+ A+ KR L F SP P ++ DGA +SP + S A A Y R NAGQK + AL DI + P+RYR+MYT LEERA + EK LL LQ + +R GL EVTPVGVP+QE V V+GR+CCE+ EG++N+AS++LEGSRRDS G RV L+L +L +F+LFPGQVVA++GVNSSG +MV R +IEG+PRP TS +++ FQH + GG ALS+ AAGP+TT+DSL YEPL DLL + +PDV VL GPFVDA HP VA+G+ I ESVDFE+LF++R+S L+ L+ ++ L ++ +LVPSL DVFH+ PP DR+ GGV + EER+ L +P + KR++ NP++ VNEV +GV++ D L LSG+EVS NRLARLA H+LQQQSF+PLFPPPA AQLD+RHA MP TPDVLL+PS+L F ++V G LC+NPG L KG GGGTYA L +HP+P E L + P+ + H+VARR+ EI RI
Sbjct: 2 TGTGSAVKEGEVLNAFQEINEDLHGKAEVVEKCLSIIHHLGLSARDLANEWEAHAMNRGSDDSSQALLNLSSLGSLEATLSKRGTGAGG---------------------ATVTPAASTRRSGR--ASFDPSTLPSTEQAMRKRLSLSEDPASAEKWPGAGAFLSPSPSKAPVKRRPPSSDGAGFMSPPAAASFTPSAAASTPAPMLXXXXXXXXXXXXXXXXXATAYLNRTNAGQKAGTLPGAL------------------DINL------PSRYRFMYTTLEERARAQEKMLLRLQDDLVAR-GLEAEAEVTPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGVNSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVFHD----HPPLADRIPGGVPSPW--FEEERLGDLGLPFASEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSY--NPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMS------PETEVQHEVARRTHAEIVRI 678
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: B8BYS5_THAPS (DNA polymerase alpha subunit B n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYS5_THAPS) HSP 1 Score: 392 bits (1008), Expect = 3.920e-119 Identity = 260/744 (34.95%), Postives = 383/744 (51.48%), Query Frame = 1
Query: 157 MAAVTEAQVARSFSKIGEDPSDKDFIGKCVSLCQRFSLSASDLADHWESFAVNHDGSKLEMASWASFETEVAKSK------AAETAXXXXXXXXXXXXXXXXXXXXXSIVTPRSAGRRVVNMVSSEDLSTPYSSSSAVSKRHLLPFSSPD----PRSKIARQDGGDDDGAAG---LSPTSVQSPPDLARAVYAERKNAGQKVTSHNPALGLRGLAVPASPRKAGTR---CDIRVDEAVGAP------ARYRYMYTPLEERAASLEKCLLALQGQMESRFGL--------------TEV--------TPVGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLREL-------QSFALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPF-HDRVEGGVELGVGAYPEERMFVLDIP-----KTGGSARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQLDMRHAQRWGMPSTPDVLLVPSRLAQFAREV-QGCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
M + + ++ +F+ +G + K L L+ LA+ WE+ ++ + L+ ++ +++ +AK A+ + S VTP +R TP S+S A + S+ D P K+ G G A ++PT+ +P Y +R G VTS+NP + V A T C I+ + P +R+M+TPL RA +LE +L + + ++ + EV TPVG+P+Q +VV VGRIC E+ EG++NRASI LEGSR+DSSG R+HLDL L QS++ FPGQ+VA++G+NSSG M A + EGVP P+ S EL+++ +G D G LSI + GPFTT D+L Y+PL D++ + +PDVV++ GPFVD P+V G+ TI DG + V +E LF+ + + L+ ++A+D D+ TQF+LVPS D+ E VYPQPP + V GV+ + + ++I KT S R KRVH NP L +NE+++GV+S+D LF +S +E +A RL R+A H++QQ+S+YPLFP A A LD+ + W MP PD+L+VPS+L FAR+V + VNPG+L K T GGTYA + VHPM +E L K DA + H V R V+I+RI
Sbjct: 1 MTSTLKNEITSAFTTVGLTSLPAPLVTKLTGLSTSLRLTPRQLAEAWEAHSLTRNVDVLDDVTFGGYQSALAKEAESKGLIASSSVDSKRNVVVMQSSGLGKRTAPHSSVTPSPMAKRGAQ--------TPQSASGATAPADRSGLSAVDNLTTPSGKVPISPGMKHPGVASANQITPTAKSAPK------YQDRTGTGSLVTSYNPNSLPTAVEVNAQNADNATTQKTCTIQYHPSSTHPQPPTKSTPFRHMFTPLATRAKALESRILTMSDSICEKYNIKSEEEEMLKYEHVSAEVVDDNMACWTPVGIPKQGKVVCVGRICNEAHEGRLNRASIRLEGSRKDSSGSRIHLDLNSLVTNNDNNQSYSFFPGQIVAVEGINSSGRTMQASRLYEGVPPPVEKSTAKELIKYNYGPDGQNGMPLSIVSMCGPFTTKDNLEYDPLVDMVMKISEDQPDVVIMCGPFVDGRQPLVQGGEPTITDEDGNEKKVSYENLFQTKFAALLEEMYANDPDMKTQFVLVPSTEDMICESVYPQPPLVNQEVTSGVKKFNDEFGNLGLNYVEIAGRENIKT--SERTKRVHCVSNPCTLKINELSVGVTSSDVLFHISSDETNANLPPGGRLTRIAQHLIQQRSYYPLFP--AAKGACLDLSRSDEWEMPVQPDILIVPSKLTTFARKVLDTTVVVNPGELTKNTTGGTYAVIDVHPMKKEALEKGG-------DAEMEHGVQDRVRVDIKRI 719
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: A0A7S2ERG3_9STRA (DNA polymerase alpha subunit B n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ERG3_9STRA) HSP 1 Score: 385 bits (990), Expect = 5.150e-117 Identity = 249/713 (34.92%), Postives = 370/713 (51.89%), Query Frame = 1
Query: 226 DFIGKCVSLCQRFSLSASDLADHWESFAVNHDGSKLEMASWASFETEVAKSKAAETAXXXXXXXXXXXXXXXXXXXXXSIVTPRSAGRRVVNMVSSEDLSTPYSSSSAVSKRHLLPFSSPDPRSKIARQDGGDDDGAAGLSPTSVQS-----PPDLARAV-------YAERKNAGQKVTSHNPALGLRGLAVPASPR---KAGTRCDIRVDEAVGAPARYRYMYTPLEERAASLEKCLLALQGQMESRF--------------GLTEVTPVGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLREL--------QSFALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRV-EGGVELGVGAYPEERMFVLDIP-------KTGGSARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSA----AQLDMRHAQRWGMPSTPDVLLVPSRLAQFAREV-QGCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
D + KC ++ + S++ + LA+ WE+ ++N + S+L ++A F ++ V +M S S SS + KRH S P K R + +++ +S + ++S PP + + Y ERKNAG V S+NP L L+ ++P K +C R+M+T ++RA +L K L+ +++ + L + VGVPRQE+V +GRIC E+ EGK+NR S++LEGSR S+G RV+LD+ L SF+LFPGQ+VA++G+N+SG ++VA + EG P E+ F + + I AGP+TT D+L Y PL+DLL +R +PDVV+L GPFVD +HP+V +G+ I+ +G + E LF R+S L+ LF + L TQF+LVP L D EFVYPQPP DR+ +GG +L + + L + + G S KR+H PNP L +NEVTIG++STD LF ++ +E + +RLARL H++QQQS+YPL+PPP +A LD++ ++W M PD+L+VPS+L FAR+V + +NPGQL++GT GGTYA + VHPM + + K+E D I V R CVEI+RI
Sbjct: 29 DILSKCAAMAKNLSITPTQLAESWEAHSINRNISELTDVTFAGFRNDLLSD--------------------------------------VESMAPSTVTSGAVHESSGLGKRHASGGPSQTPPPKQRRVEIKEEEVTPRVSVSPLKSKLSPVPPTPSSILKGANTPKYEERKNAGATVASYNP-HSLTPLSSSSAPHIFYKHVEKC--------------RFMFTTPQDRANALNKRLVEFGKRIQEVYDIKDMYDVEEDQEVALARLENVGVPRQEKVCCIGRICNEAHEGKLNRTSLLLEGSRHQSNGMRVNLDISPLLDANLETRSSFSLFPGQIVAVEGINASGRKLVAHKLCEGAAPPKAVLTAGEMKEFYKSEK----EGMKIMTCAGPYTTMDNLEYNPLSDLLQQIREEQPDVVILTGPFVDIKHPLVQSGNVEIDVGEGNMSKIPHEALFAQRISALLEQLFEDEEGLGTQFVLVPHLDDAVAEFVYPQPPLSDRLPKGGKQLNLSSAEAIDFGSLGLHHIESANRQPGQSTTPKRIHCVPNPCTLRINEVTIGITSTDVLFHMNCDEANGNLPPGSRLARLTQHLIQQQSYYPLYPPPVSNARNSSVNLDLKQMEKWSMECQPDILIVPSKLTTFARKVLDTTVAINPGQLSRGTAGGTYAVMDVHPMKRSLWEGKEE------DVEIDDGVQDRICVEIKRI 678
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: A0A7S2F9H8_9STRA (DNA polymerase alpha subunit B n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9H8_9STRA) HSP 1 Score: 347 bits (891), Expect = 5.780e-107 Identity = 188/364 (51.65%), Postives = 244/364 (67.03%), Query Frame = 1
Query: 1138 QGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDIPKTGGSARQ-KRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQ---LDMRHAQRWGMPSTPDVLLVPSRLAQFAREVQ-GCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
+G+NSSG RMV + + EGVPRPLP S P EL++ HG G + LSI AAGPF T+D+L YEPL+DLL + + DV+VL GPFVD HP ++ GD IE DG ESVD++T F ++S L+TL+ + D Q +LVPSL D H++V+PQPPF DRVEGG + +PEE++F LDIP TGG KRVH NPA + VNEV +GV+STD L L E++ +NRL RLA H+L+QQSF+PLFP G A + +DM + R MP +PDVLLVPSRLA FAR++ G L VNPGQLA+G+GGGT+A L + +P+E L ++ A +P IPH VA R+ V+IRRI
Sbjct: 1 EGINSSGTRMVVKNLCEGVPRPLPRSAPDELMKLHHGV---GSQPLSIAVAAGPFCTNDNLDYEPLSDLLHSAK--HNDVLVLCGPFVDVNHPKLSGGDVDIETEDG-VESVDYDTFFNFKISGVLETLYEENPDTKLQVVLVPSLHDAHHDYVFPQPPFADRVEGGQQSPF--FPEEKLFTLDIPHTGGLGEDSKRVHCVSNPAMIKVNEVVVGVTSTDVLMQLGKAEIAQRPMSSNRLGRLAEHLLKQQSFHPLFPANGGVAGEPVPVDMTKSDRLRMPMSPDVLLVPSRLATFARKLDNGTLVVNPGQLARGSGGGTFASLTIGGLPKEAL---EQVAAKEPSTPIPHQVAERTAVQIRRI 353
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: A0A1Z5KI39_FISSO (DNA polymerase alpha subunit B n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI39_FISSO) HSP 1 Score: 355 bits (911), Expect = 4.540e-106 Identity = 247/691 (35.75%), Postives = 365/691 (52.82%), Query Frame = 1
Query: 172 EAQVARSFSKIGEDPSDKDFIGKCVSLCQRFSLSASDLADHWESFAVNHDGSKLEMASWASFETEVAKSKAAETAXXXXXXXXXXXXXXXXXXXXXSIVTPRSAGRRVVNMVSSEDLSTPYSSSSAVSKRHLLPFSSPDPRSKIARQDGGDDDGAAGLSPTSVQSPPDLARAVYAERKNAGQKVTSHNPALGLRGLAVPASPRKAGTRCDIRVDE-AVGAPARYRYMYTPLEERAASLEKCLLALQGQMESRFGL---TEVTP---VGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLRELQSFALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFV--LDIPKTGGSARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQLDMRHAQRWGMPSTPDVLLVPSRLAQFAREVQGC-LCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
+ ++ +FSK+G D+ + KC + L+ +A WE++++ + + L S+ F + K + T VTP + +R+ V++E P SSS++S P P P S+Q P D Y R AGQ V++ + VP S K C IR D + YR M+T E+RA +L + LL + + ++ L +V P VG+PR +QV VGRIC + GK+N S +LEGSR + G RV LD + +++FPGQ+VAL+G+N +G ++ + + EG T++ S L ++ A G+ L + AAGPFTTSD+ Y+PL DLL V+ +PDVV+L GPFVD +HP V +G ++ +G V +ET F ++S L+ L L TQF+LVPSL D E+VYPQPPF DRV GG++ + + LD +T +RVH PNP L +NEV IG++STD LF +S +E +A +RLAR++ H+LQQ+S+YPLFPP G +D ++ ++W MP PDVL++PS+LA F+R V + VNPG+L + T GGTYA + VHP +++L E AD DA +PH + R+ VEI+RI
Sbjct: 5 QPELKNAFSKVGLKTIDEATMSKCTAAATMLRLTPQQVATCWEAYSLKKNTTTLNEQSFEGFRDLLVKE--SNTLDIPMSETNDSPRGAVLPPRSLPHVTPPA--KRLQLAVATE----PRRSSSSLS---------PGP-------------------PVSLQ-PSDK----YETRTGAGQIVSTFSAKEKRTATYVPLSRPK----CAIRKDSFSTNLSHTYRSMFTTTEQRATALNQQLLEMTKHLIDKYQLGQSDQVAPLEGVGIPRADQVCNVGRICNAAHAGKINATSCLLEGSRAEG-GVRVSLDWSGVSQYSVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTTRRSALRQYHLQAQE--GQPLKLVTAAGPFTTSDNFHYQPLQDLLHVVQQEQPDVVILTGPFVDLDHPAVQSGQTILQDEEGNDVIVPYETFFVHKISLLLEELLTEHPMLMTQFVLVPSLEDATAEWVYPQPPFQDRVPGGLQPNIPGADGITIGTMGLDYVETATELPCQRVHCVPNPCTLQINEVVIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLFPPAPGM--NMDYQYMEQWSMPCQPDVLILPSKLACFSRTVMDTTIVVNPGRLTRDTVGGTYAIMEVHPFSKDVL-----EAADD-DAELPHALPERTEVEIKRI 639
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: A0A1Z5K576_FISSO (DNA polymerase alpha subunit B n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K576_FISSO) HSP 1 Score: 348 bits (893), Expect = 3.440e-103 Identity = 246/705 (34.89%), Postives = 373/705 (52.91%), Query Frame = 1
Query: 157 MAAVTEAQVARSFSKIGEDPSDKDFIGKCVSLCQRFSLSASDLADHWESFAVNHDGSKLEMASWASFETEVAKSKAAETAXXXXXXXXXXXXXXXXXXXXXSIVTPRSAGRRVVNMVSSEDLSTPYSSSSAVSKRHLLPFSSPDPRSKIARQDGGDDDGAAGLSPTSVQSPPDLARAV---YAERKNAGQKVTSHNPALGLRGLAVPASPRKAGTRCDIRVDEAV------GAPARYRYMYTPLEERAASLEKCLLALQGQMESRFGL---TEVTP---VGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLRELQS-FALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFV--LDIPKTGGSARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQLDMRHAQRWGMPSTPDVLLVPSRLAQFAREVQGC-LCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
M + + ++ +FSK+G D+ + KC + LS +A WE++++ + + L S+ F + K ++ XXXXXXXXXX +++ PRS H+ P P R ++A + + +S+ P +A Y R AGQ V++ + A +P + +C IR + + YR ++T E+RA +L++ L+ + + ++ L EV P VG+PR +QV +GRIC + GK+N S++LEGSR G RV +DL L S +++FPGQ+VAL+G+N +G ++ + + EG TS+ +L ++ A G+ + + AAGPFTTSD+ Y+P DLL V+ +PDVV+L GPFVD HP V +G ++ DG V +ET F ++S L+ L + L TQF+LVPSL D E+VYPQPPF DRV GG++ + + LD +T KRVH PNP L +NEV IG++STD LF +S +E +A +RLAR++ H+LQQ+S+YPLFPP G +D ++ + W MP PD+LL+PS+LA F+R V + VNPG+L + T GGTYA + VHP +++L E AD D +PH + R+ V I+RI
Sbjct: 1 MTTMQQFELKNAFSKVGLKVIDEATMSKCTAAATMLRLSPQQVATCWEAYSLKKNTTTLNEQSFEGFRDLLVK-ESNTVNNNIPMSDEXXXXXXXXXXRGGAVLPPRSLP-------------------------HVTP---PAKRLQLAAVTNNTNTEPSSRRSSSLSPGPPVALQPSDKYETRIGAGQIVSTFT--AEHKRTATNDNPLLSRPKCTIRSESSAFSTNNNNLSQAYRSLFTTTEQRATALDQQLIHMGQHLMEKYQLGQSDEVAPLEGVGIPRADQVCNIGRICNAAHYGKINATSVLLEGSRAAVGGARVAVDLSTLSSQYSVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTSRVRDLRQYHLQAQQ--GQPVKLLTAAGPFTTSDNFQYQPWQDLLHVVQNEQPDVVILTGPFVDMNHPAVQSGQTALQDEDGNDVIVPYETFFMHKISLLLEELLTENPLLMTQFVLVPSLEDATAEWVYPQPPFQDRVSGGLQPNIPGADGITIGTMGLDYVETATELPAKRVHCVPNPCTLQINEVVIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLFPPAPGM--NMDYQYMEYWSMPCQPDLLLLPSKLACFSRIVMDTTIVVNPGRLTRDTMGGTYAIIEVHPFAKDVL-----ETADDDDE-LPHALPERTEVIIKRI 664
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: A0A7S2FH66_9STRA (DNA polymerase alpha subunit B n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FH66_9STRA) HSP 1 Score: 343 bits (881), Expect = 3.760e-102 Identity = 209/539 (38.78%), Postives = 310/539 (57.51%), Query Frame = 1
Query: 643 LSPTSVQSP---------PDLARAVYAERKNAGQ---------KVTSHNPALGLRGLA-------VPASPRKAGTRCDIRVDEAVGAPARYRYMYTPLEERAASLEKCLLALQGQMESRFGL---TEVTPVGVPRQEQVVVVGRICCES-AEGKMNRASIILEGSRRDSSGQRVHLDLRELQSFALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATI--ECVDGGS---ESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDIPKTGGS-ARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQ----LDMRHAQRWGMPSTPDVLLVPSRLAQFAREVQ-GCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQE 2139
SP+S+Q+P P YA RKNAG +V + +P + G++ V P D E+VG + YR+MYT + +RAASL++ ++ ++ + G + +PVGV Q+ VV GR+CC++ EGK+N+ SI+LEG R + GQR+ L L++L SFALFPGQ V ++G+NSSG RMV + ++ GVPRPLP +Q ++ L + A+GPF +++L Y PL DLL + DV++L GPFVD HP + +G + + DG + ES+D+ LF L++++ L+ + + Q ++VPSL D FH+ VYPQPP D+ GV+ +PEE+ F ++IP + KR+HL NPA L +NEV +G+SSTD L + E++ + RL RLA H++ QQSF+PLFP G A LD+ ++RW MP +PD+L++PS+LA FA + G L +NPGQ+A+G+GGGTYA L +HP P + K E
Sbjct: 64 FSPSSLQTPGQKIDIVSHPVTPSKSYATRKNAGDITLEMRAKIEVPTDSPGKEINGMSRQPCHINVFGEPGSPAPESDSS-HESVGVASHYRHMYTTVMDRAASLQRSFDHMEQELLAHAGKEHSSRRSPVGVRSQDPVVCFGRVCCDTLGEGKINKTSILLEGGRMEG-GQRIELKLQDLSSFALFPGQWVLVEGINSSGPRMVVKRLMTGVPRPLPQAQITK----------KRTSPLRLVVASGPFCCTNNLDYAPLKDLL--LNANSADVLILSGPFVDVAHPQLKSGVVLMAGDTDDGATCEMESLDYCNLFNLKVTQALEDMQDAHPSSTLQIVMVPSLADAFHDCVYPQPPLTDQSRKGVKSPW--FPEEKYFDVEIPFAAQTEVTGKRMHLVSNPAMLRINEVVVGISSTDILMSMGRAEIAENPKNKQRLPRLAEHLVNQQSFFPLFPANGGVKANEDVPLDLSQSERWRMPVSPDILILPSKLATFASTLSNGTLALNPGQVARGSGGGTYANLVIHPQPNQARGVKPE 586
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: A0A8K1CIP2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIP2_PYTOL) HSP 1 Score: 344 bits (883), Expect = 4.530e-102 Identity = 234/688 (34.01%), Postives = 363/688 (52.76%), Query Frame = 1
Query: 181 VARSFSKIGEDPSDKDFIGKCVSLCQRFSLSASDLADHWESFAVNH--DGSKLEMASWASFETEVAKSKAAETAXXXXXXXXXXXXXXXXXXXXXSIVTPRSAGRRVVNMVSSED-LSTPYSSSSAVSKRHLLPFSSPDPRSKIARQDGGDDDGAAGL-SPTSVQSPPDLARAVYAERKNAGQKVTSHNPALGLRGLAVPASPRKAGTRC-DIRV---DEAVGAPARYRYMYTPLEERAASLEKCLLALQGQMESRFGLTEVTPVGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLRELQSFALFPGQVVALQGV-NSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDIPKTGGSARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEV-SAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQLDMRHAQRWGMPSTPDVLLVPSRLAQFAREVQGCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
V ++F+ D D D + C+++C FSL+A +LA W+++++NH DG+ ++ F +++A+ KAA++ ++ +R + SS+D L+ Y+ S K + F+SP K+AR AGL SP+S+QSPP + Y R +AG+ V+ N L+ VP + T IRV D + A A Y MYTPL ERA +L++ L+ + +++ + L + V P QV VVGRI CE+AEGK+N + + LEGSR+ GQRV LDL + +F ++PG++VAL+GV + MV + +E VP P+PT++ + L + L + A+GPFTT+ ++ Y PLNDLL VR +PDV++L+GPF+D H G V+ + FE +F ++ LD++ + L Q ++VPS+RD H++VYPQPPF+ + G KRVH+ NP +N+V +GVS+ D + LS E+ A + NRL RL ++ Q+S+YPLFPPP + A +D+R+ ++ TPDVL++PS L +F V +CVNPGQL KG GGT+A L V P+ ++ + + + H V R+ V+I+RI
Sbjct: 12 VRQAFASCNLDVLD-DAVHTCIAICAEFSLTADELAAQWDAYSMNHQVDGA-ADVDKLGVFRSKLAQDKAAKSKEGSAAAASGANKRKHAKVSSTPVI------KREIKTESSQDPLNALYNMKSPEGK-NARSFASPP--GKVAR--------TAGLFSPSSMQSPPTTS---YENRTDAGKTVSEFN--AHLKKELVPMTDASENTEAVSIRVPFPDRNLKANAPY--MYTPLFERALALDEQLVEYEELIKTHYNLENIAAVADPSPAQVTVVGRIVCEAAEGKLNASVVQLEGSRKTCGGQRVLLDLSAVPNFQVYPGKIVALEGVYEDTRNPMVVKRFLEPVPAPMPTTEKARLETIYVNDQK---RPLRVVTASGPFTTTSNVSYLPLNDLLQIVREQKPDVLILVGPFIDTTHASFRDG-----LVEFDGMMLGFEDIFLFKVMAALDSILEQHKTL--QVVMVPSVRDAHHQYVYPQPPFNKKKA-------------------CEALGSPEHAKRVHMMSNPCTFAINDVVVGVSALDIVMHLSSNELYRAQARDQNRLLRLCQQVVDQRSYYPLFPPPPNAEAPIDLRYMTQFQFERTPDVLILPSMLNRFCGRVHDSICVNPGQLCKGESGGTFAALTVLPLSKDKITNSTTD-------EVAHFVPDRTTVDIKRI 637 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1855.1 >prot_P-fluviatile_contig13.1855.1 ID=prot_P-fluviatile_contig13.1855.1|Name=mRNA_P-fluviatile_contig13.1855.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=687bp MAAVTEAQVARSFSKIGEDPSDKDFIGKCVSLCQRFSLSASDLADHWESFback to top mRNA from alignment at P-fluviatile_contig13:2222634..2231182- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1855.1 ID=mRNA_P-fluviatile_contig13.1855.1|Name=mRNA_P-fluviatile_contig13.1855.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8549bp|location=Sequence derived from alignment at P-fluviatile_contig13:2222634..2231182- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:2222634..2231182- >mRNA_P-fluviatile_contig13.1855.1 ID=mRNA_P-fluviatile_contig13.1855.1|Name=mRNA_P-fluviatile_contig13.1855.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4122bp|location=Sequence derived from alignment at P-fluviatile_contig13:2222634..2231182- (Porterinema fluviatile SAG_2381)back to top |