mRNA_P-fluviatile_contig13.1855.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1855.1
Unique NamemRNA_P-fluviatile_contig13.1855.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: D8LTZ2_ECTSI (DNA polymerase alpha subunit B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTZ2_ECTSI)

HSP 1 Score: 1117 bits (2890), Expect = 0.000e+0
Identity = 587/703 (83.50%), Postives = 634/703 (90.18%), Query Frame = 1
Query:  157 MAAVTEAQVARSFSKIGEDPSDKDFIGKCVSLCQRFSLSASDLADHWESFAVNHDGSKLEMASWASFETEVAKSKAAET----AXXXXXXXXXXXXXXXXXXXXXSIVTPRSAGRRVVNMVSSEDLSTPYSSSSAVSKRHLLPFSSPDP--RSKIARQDGGDDDGAAGLSPTSVQSPPDLARAVYAERKNAGQKVTSHNPALGLRGLAVPASPRKAGTRCDIRVDEAVGAPARYRYMYTPLEERAASLEKCLLALQGQMESRFGLTEVTPVGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLRELQSFALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDIPKTGG-----------SARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQLDMRHAQRWGMPSTPDVLLVPSRLAQFAREVQGCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
            MAAVTE++VA SFSKIGEDPSDKDFIGKCVSLCQRFSLSA DLADHWESFAVNHDGS+L M+SWA FETEVAKSKAA +    A      XXXXXX XXXXXXXX IVTPR AGRRVVN V+SEDL+      S+ +KR +LPFSSP+P  RSK+ARQDG   DGA+ LSPTSVQSPPDL RAVY+ RKNAGQK  S+NPALGLRGL+V  SPR+AGTRCD+ VD AVGAPARYRYMYTPLEERAA+LEK L+ALQGQME +FGLTE+TPVGVPRQEQVV VGR+CCES EGK+NRASI+LEGSRRDSSGQR HLDLRELQSFALFPGQVVA+QGVN SGGRMVARG+I+GVPRPLP+S+PS+L+R QHGA+L GGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVR ARPDVVVLMGPFVD+EHP VA+GDATIECVDGGSESVDFETLFRLRLSEKLD LFA DRDLPTQF+LVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLD+PKTG            +ARQKRVHLAPNPAWL VNEVTIGVSSTDALFDLSG+EVSAGG+GTNRLARLAGH+LQQQSFYPLFPPPAGSAAQLDMRHA RWGMP+TPDVLLVPSRLAQFAR+VQGCLCVNPGQL+KGTGGGTYAELAVHPMPQE LAKKQEELADKPDAT+ HDVA+R+CVEIRRI
Sbjct:    1 MAAVTESEVAGSFSKIGEDPSDKDFIGKCVSLCQRFSLSAGDLADHWESFAVNHDGSRLGMSSWAGFETEVAKSKAAASTPPAASTGTASXXXXXXRXXXXXXXXXIVTPRPAGRRVVNTVTSEDLA------SSGTKRPMLPFSSPNPKARSKLARQDGEGGDGAS-LSPTSVQSPPDLVRAVYSSRKNAGQKTASYNPALGLRGLSVAPSPRQAGTRCDVVVDGAVGAPARYRYMYTPLEERAAALEKGLVALQGQMERKFGLTEITPVGVPRQEQVVAVGRVCCESTEGKINRASILLEGSRRDSSGQRAHLDLRELQSFALFPGQVVAVQGVNGSGGRMVARGIIDGVPRPLPSSRPSDLLRAQHGAELGGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRAARPDVVVLMGPFVDSEHPKVASGDATIECVDGGSESVDFETLFRLRLSEKLDKLFADDRDLPTQFVLVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDVPKTGARTTSGGASAAAAARQKRVHLAPNPAWLRVNEVTIGVSSTDALFDLSGDEVSAGGKGTNRLARLAGHLLQQQSFYPLFPPPAGSAAQLDMRHAHRWGMPATPDVLLVPSRLAQFARQVQGCLCVNPGQLSKGTGGGTYAELAVHPMPQETLAKKQEELADKPDATVEHDVAKRTCVEIRRI 696          
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: A0A836CA88_9STRA (DNA polymerase alpha subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA88_9STRA)

HSP 1 Score: 508 bits (1309), Expect = 1.510e-163
Identity = 312/723 (43.15%), Postives = 406/723 (56.15%), Query Frame = 1
Query:  157 MAAVTEAQVARSF------SKIGEDPSDKDFIGKCVSLCQRFSLSASDLADHWESFAVNHDGSKLEMASWASFETEVAKSKAAETAXXXXXXXXXXXXXXXXXXXXXS--IVTPRSAGRRVVNMVSSED-------LSTPYSSSSAVSKRHLLPFSSPDP-----RSKIARQDGGDDDGAAGLSPTSVQSPPDLARAVYAERKNAGQKVTSHNPALGLRGLAVPASPRKAGT-----RCDIRVDEAVGAPARYRYMYTPLEERAASLEKCLLALQGQMESRFGLTEVTPVGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLRELQSFALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGG---------SESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDIPKTGGSARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQLDMRHAQRWGMP---STPDVLLVPSRLAQFAREVQGCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
            MAAV+  +V ++F      +++    S  D +  CVSLC RFSL   DLA+ WE++A N   +KL  A  A     +AK  A+ ++                     S  ++T  SA R +   V S         +S P S+ +  ++     FSSP P     ++ +A + GG           +   P    +A YA+R NAG +V  +NP+  +   A+ A            RC +     VGA ARYRYM+ PLEER+   E  LLA   ++     L E+TPVGVPRQE+V VVGR+ CES EG+M RAS +LEGS RDS G R  L L  L SFALFPGQ+VA +G+NS G RM  RG++ G P P     P+                     AAGP+TT D+L YEPLNDLL  V+  RPDVVVLMGPFVDAEHP++AAG A +  V GG         +E VDFETLFRLR+ +KL+ + A D   PTQF+L+PS RD FH+  YPQPPF D V GG  LG+G Y ++ ++ L +P      R  RV   PNPA   V       +S D+LFDLS EE + G  G  RLARLA H+LQQ+SFYPL P  AG    LD R A    +    + PDVLL+P RLAQFAR+V+GC+CVNPG L +G GGGTYA LA+HP+P+   A+ +    D PD  +PH VA+R+ +E+RRI
Sbjct:    1 MAAVSSTEVLQAFKSRVQKAELTALESQPDLLESCVSLCTRFSLKVDDLANEWEAYACNDQAAKLSSAGLAQLTALLAKRSASSSSARKPPQPSSAPRRLVTARPTVSPPLLTKESAARALATPVPSHLKRPLPGLMSPPGSTVNKAARTGAGGFSSPAPSLSVQQTPVAARSGGGXXXXXXXXXXAAHMP----QAAYADRANAGARVLEYNPSKLMHAGAIAAXXXXXXXXXXRQRCSVEPICGVGAAARYRYMFAPLEERSRLQEAALLAATAELARAHALGELTPVGVPRQEEVTVVGRVVCESGEGRMGRASALLEGSWRDSGGARAALALDALPSFALFPGQIVAARGINSGGMRMAVRGLLPGSPAP-----PAXXXXXXXXXXXXXXXXXXXXVAAGPYTTDDNLEYEPLNDLLAHVQETRPDVVVLMGPFVDAEHPLIAAGAAALP-VPGGXXXXXXXDAAEPVDFETLFRLRVCDKLERVLA-DPAHPTQFVLIPSTRDAFHDATYPQPPFADAVAGGAPLGIGEYADDAVYTLGLP------RDARVACLPNPAAFAVGGAVFAATSADSLFDLSCEEAAGGAGGAPRLARLADHLLQQRSFYPLRPARAG--VPLDPRRAAALALAPRGAAPDVLLLPGRLAQFARDVRGCVCVNPGALTRGGGGGTYAALALHPLPR---AELEAAARDAPDIAVPHGVAQRTALEVRRI 701          
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: W7TPC9_9STRA (DNA polymerase alpha subunit B n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPC9_9STRA)

HSP 1 Score: 493 bits (1268), Expect = 8.670e-158
Identity = 315/739 (42.63%), Postives = 417/739 (56.43%), Query Frame = 1
Query:  148 TSAMAAVTEAQVARSFSKIGEDPSDK-DFIGKCVSLCQRFSLSASDLADHWESFAVNH---DGSK--LEMASWASFETEVAKSKAAETAXXXXXXXXXXXXXXXXXXXXXSIVTPRSAGRRVVNMVSSEDLSTPYSSSSAVSKRHLLP--------------FSSPDPRSKIARQDGGDDDGAAGLSPTSVQSPPDLARA--------------------------VYAERKNAGQKVTSHNPALGLRGLAVPASPRKAGTRCDIRVDEAVGAPARYRYMYTPLEERAASLEKCLLALQGQMESRFGL---TEVTPVGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLRELQSFALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDIP-KTGGSARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQLDMRHAQRWGMPSTPDVLLVPSRLAQFAREVQGCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
            T   +AV E +V  +F +I ED   K + + KC+S+     LSA DLA+ WE+ A+N    D S+  L ++S  S E  ++K                            + VTP ++ RR     +S D ST  S+  A+ KR  L               F SP P     ++     DGA  +SP +  S    A A                           Y  R NAGQK  +   AL                  DI +      P+RYR+MYT LEERA + EK LL LQ  + +R GL    EVTPVGVP+QE V V+GR+CCE+ EG++N+AS++LEGSRRDS G RV L+L +L +F+LFPGQVVA++GVNSSG +MV R +IEG+PRP  TS   +++ FQH +   GG ALS+  AAGP+TT+DSL YEPL DLL  +   +PDV VL GPFVDA HP VA+G+  I       ESVDFE+LF++R+S  L+ L+ ++  L ++ +LVPSL DVFH+     PP  DR+ GGV      + EER+  L +P  +      KR++   NP++  VNEV +GV++ D L  LSG+EVS      NRLARLA H+LQQQSF+PLFPPPA   AQLD+RHA    MP TPDVLL+PS+L  F ++V G LC+NPG L KG GGGTYA L +HP+P E L +        P+  + H+VARR+  EI RI
Sbjct:    2 TGTGSAVKEGEVLNAFQEINEDLHGKAEVVEKCLSIIHHLGLSARDLANEWEAHAMNRGSDDSSQALLNLSSLGSLEATLSKRGTGAGG---------------------ATVTPAASTRRSGR--ASFDPSTLPSTEQAMRKRLSLSEDPASAEKWPGAGAFLSPSPSKAPVKRRPPSSDGAGFMSPPAAASFTPSAAASTPAPMLXXXXXXXXXXXXXXXXXATAYLNRTNAGQKAGTLPGAL------------------DINL------PSRYRFMYTTLEERARAQEKMLLRLQDDLVAR-GLEAEAEVTPVGVPKQETVTVIGRVCCEAPEGRINKASVLLEGSRRDSGGFRVKLELGQLPAFSLFPGQVVAVEGVNSSGFKMVVRRIIEGIPRPFLTSPAKKMLEFQHDSLYQGGGALSLLVAAGPYTTTDSLEYEPLEDLLKVIAARQPDVAVLCGPFVDANHPQVASGETEIAGAGEEKESVDFESLFKMRVSLFLEGLYDTNPTLASRIVLVPSLNDVFHD----HPPLADRIPGGVPSPW--FEEERLGDLGLPFASEKDGADKRLYCLSNPSFFTVNEVAVGVTTNDILCHLSGDEVSY--NPGNRLARLAAHLLQQQSFFPLFPPPADGQAQLDLRHADHLRMPITPDVLLLPSKLTPFVKDVGGALCINPGTLTKGGGGGTYAMLHIHPLPAERLERMS------PETEVQHEVARRTHAEIVRI 678          
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: B8BYS5_THAPS (DNA polymerase alpha subunit B n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BYS5_THAPS)

HSP 1 Score: 392 bits (1008), Expect = 3.920e-119
Identity = 260/744 (34.95%), Postives = 383/744 (51.48%), Query Frame = 1
Query:  157 MAAVTEAQVARSFSKIGEDPSDKDFIGKCVSLCQRFSLSASDLADHWESFAVNHDGSKLEMASWASFETEVAKSK------AAETAXXXXXXXXXXXXXXXXXXXXXSIVTPRSAGRRVVNMVSSEDLSTPYSSSSAVSKRHLLPFSSPD----PRSKIARQDGGDDDGAAG---LSPTSVQSPPDLARAVYAERKNAGQKVTSHNPALGLRGLAVPASPRKAGTR---CDIRVDEAVGAP------ARYRYMYTPLEERAASLEKCLLALQGQMESRFGL--------------TEV--------TPVGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLREL-------QSFALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPF-HDRVEGGVELGVGAYPEERMFVLDIP-----KTGGSARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQLDMRHAQRWGMPSTPDVLLVPSRLAQFAREV-QGCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
            M +  + ++  +F+ +G        + K   L     L+   LA+ WE+ ++  +   L+  ++  +++ +AK        A+ +                      S VTP    +R           TP S+S A +       S+ D    P  K+    G    G A    ++PT+  +P       Y +R   G  VTS+NP      + V A      T    C I+   +   P        +R+M+TPL  RA +LE  +L +   +  ++ +               EV        TPVG+P+Q +VV VGRIC E+ EG++NRASI LEGSR+DSSG R+HLDL  L       QS++ FPGQ+VA++G+NSSG  M A  + EGVP P+  S   EL+++ +G D   G  LSI +  GPFTT D+L Y+PL D++  +   +PDVV++ GPFVD   P+V  G+ TI   DG  + V +E LF+ + +  L+ ++A+D D+ TQF+LVPS  D+  E VYPQPP  +  V  GV+     +    +  ++I      KT  S R KRVH   NP  L +NE+++GV+S+D LF +S +E +A      RL R+A H++QQ+S+YPLFP  A   A LD+  +  W MP  PD+L+VPS+L  FAR+V    + VNPG+L K T GGTYA + VHPM +E L K         DA + H V  R  V+I+RI
Sbjct:    1 MTSTLKNEITSAFTTVGLTSLPAPLVTKLTGLSTSLRLTPRQLAEAWEAHSLTRNVDVLDDVTFGGYQSALAKEAESKGLIASSSVDSKRNVVVMQSSGLGKRTAPHSSVTPSPMAKRGAQ--------TPQSASGATAPADRSGLSAVDNLTTPSGKVPISPGMKHPGVASANQITPTAKSAPK------YQDRTGTGSLVTSYNPNSLPTAVEVNAQNADNATTQKTCTIQYHPSSTHPQPPTKSTPFRHMFTPLATRAKALESRILTMSDSICEKYNIKSEEEEMLKYEHVSAEVVDDNMACWTPVGIPKQGKVVCVGRICNEAHEGRLNRASIRLEGSRKDSSGSRIHLDLNSLVTNNDNNQSYSFFPGQIVAVEGINSSGRTMQASRLYEGVPPPVEKSTAKELIKYNYGPDGQNGMPLSIVSMCGPFTTKDNLEYDPLVDMVMKISEDQPDVVIMCGPFVDGRQPLVQGGEPTITDEDGNEKKVSYENLFQTKFAALLEEMYANDPDMKTQFVLVPSTEDMICESVYPQPPLVNQEVTSGVKKFNDEFGNLGLNYVEIAGRENIKT--SERTKRVHCVSNPCTLKINELSVGVTSSDVLFHISSDETNANLPPGGRLTRIAQHLIQQRSYYPLFP--AAKGACLDLSRSDEWEMPVQPDILIVPSKLTTFARKVLDTTVVVNPGELTKNTTGGTYAVIDVHPMKKEALEKGG-------DAEMEHGVQDRVRVDIKRI 719          
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: A0A7S2ERG3_9STRA (DNA polymerase alpha subunit B n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ERG3_9STRA)

HSP 1 Score: 385 bits (990), Expect = 5.150e-117
Identity = 249/713 (34.92%), Postives = 370/713 (51.89%), Query Frame = 1
Query:  226 DFIGKCVSLCQRFSLSASDLADHWESFAVNHDGSKLEMASWASFETEVAKSKAAETAXXXXXXXXXXXXXXXXXXXXXSIVTPRSAGRRVVNMVSSEDLSTPYSSSSAVSKRHLLPFSSPDPRSKIARQDGGDDDGAAGLSPTSVQS-----PPDLARAV-------YAERKNAGQKVTSHNPALGLRGLAVPASPR---KAGTRCDIRVDEAVGAPARYRYMYTPLEERAASLEKCLLALQGQMESRF--------------GLTEVTPVGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLREL--------QSFALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRV-EGGVELGVGAYPEERMFVLDIP-------KTGGSARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSA----AQLDMRHAQRWGMPSTPDVLLVPSRLAQFAREV-QGCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
            D + KC ++ +  S++ + LA+ WE+ ++N + S+L   ++A F  ++                                         V +M  S   S     SS + KRH     S  P  K  R +  +++    +S + ++S     PP  +  +       Y ERKNAG  V S+NP   L  L+  ++P    K   +C              R+M+T  ++RA +L K L+    +++  +               L  +  VGVPRQE+V  +GRIC E+ EGK+NR S++LEGSR  S+G RV+LD+  L         SF+LFPGQ+VA++G+N+SG ++VA  + EG   P       E+  F         + + I   AGP+TT D+L Y PL+DLL  +R  +PDVV+L GPFVD +HP+V +G+  I+  +G    +  E LF  R+S  L+ LF  +  L TQF+LVP L D   EFVYPQPP  DR+ +GG +L + +        L +        + G S   KR+H  PNP  L +NEVTIG++STD LF ++ +E +      +RLARL  H++QQQS+YPL+PPP  +A      LD++  ++W M   PD+L+VPS+L  FAR+V    + +NPGQL++GT GGTYA + VHPM + +   K+E      D  I   V  R CVEI+RI
Sbjct:   29 DILSKCAAMAKNLSITPTQLAESWEAHSINRNISELTDVTFAGFRNDLLSD--------------------------------------VESMAPSTVTSGAVHESSGLGKRHASGGPSQTPPPKQRRVEIKEEEVTPRVSVSPLKSKLSPVPPTPSSILKGANTPKYEERKNAGATVASYNP-HSLTPLSSSSAPHIFYKHVEKC--------------RFMFTTPQDRANALNKRLVEFGKRIQEVYDIKDMYDVEEDQEVALARLENVGVPRQEKVCCIGRICNEAHEGKLNRTSLLLEGSRHQSNGMRVNLDISPLLDANLETRSSFSLFPGQIVAVEGINASGRKLVAHKLCEGAAPPKAVLTAGEMKEFYKSEK----EGMKIMTCAGPYTTMDNLEYNPLSDLLQQIREEQPDVVILTGPFVDIKHPLVQSGNVEIDVGEGNMSKIPHEALFAQRISALLEQLFEDEEGLGTQFVLVPHLDDAVAEFVYPQPPLSDRLPKGGKQLNLSSAEAIDFGSLGLHHIESANRQPGQSTTPKRIHCVPNPCTLRINEVTIGITSTDVLFHMNCDEANGNLPPGSRLARLTQHLIQQQSYYPLYPPPVSNARNSSVNLDLKQMEKWSMECQPDILIVPSKLTTFARKVLDTTVAINPGQLSRGTAGGTYAVMDVHPMKRSLWEGKEE------DVEIDDGVQDRICVEIKRI 678          
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: A0A7S2F9H8_9STRA (DNA polymerase alpha subunit B n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9H8_9STRA)

HSP 1 Score: 347 bits (891), Expect = 5.780e-107
Identity = 188/364 (51.65%), Postives = 244/364 (67.03%), Query Frame = 1
Query: 1138 QGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDIPKTGGSARQ-KRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQ---LDMRHAQRWGMPSTPDVLLVPSRLAQFAREVQ-GCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
            +G+NSSG RMV + + EGVPRPLP S P EL++  HG    G + LSI  AAGPF T+D+L YEPL+DLL + +    DV+VL GPFVD  HP ++ GD  IE  DG  ESVD++T F  ++S  L+TL+  + D   Q +LVPSL D  H++V+PQPPF DRVEGG +     +PEE++F LDIP TGG     KRVH   NPA + VNEV +GV+STD L  L   E++     +NRL RLA H+L+QQSF+PLFP   G A +   +DM  + R  MP +PDVLLVPSRLA FAR++  G L VNPGQLA+G+GGGT+A L +  +P+E L   ++  A +P   IPH VA R+ V+IRRI
Sbjct:    1 EGINSSGTRMVVKNLCEGVPRPLPRSAPDELMKLHHGV---GSQPLSIAVAAGPFCTNDNLDYEPLSDLLHSAK--HNDVLVLCGPFVDVNHPKLSGGDVDIETEDG-VESVDYDTFFNFKISGVLETLYEENPDTKLQVVLVPSLHDAHHDYVFPQPPFADRVEGGQQSPF--FPEEKLFTLDIPHTGGLGEDSKRVHCVSNPAMIKVNEVVVGVTSTDVLMQLGKAEIAQRPMSSNRLGRLAEHLLKQQSFHPLFPANGGVAGEPVPVDMTKSDRLRMPMSPDVLLVPSRLATFARKLDNGTLVVNPGQLARGSGGGTFASLTIGGLPKEAL---EQVAAKEPSTPIPHQVAERTAVQIRRI 353          
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: A0A1Z5KI39_FISSO (DNA polymerase alpha subunit B n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI39_FISSO)

HSP 1 Score: 355 bits (911), Expect = 4.540e-106
Identity = 247/691 (35.75%), Postives = 365/691 (52.82%), Query Frame = 1
Query:  172 EAQVARSFSKIGEDPSDKDFIGKCVSLCQRFSLSASDLADHWESFAVNHDGSKLEMASWASFETEVAKSKAAETAXXXXXXXXXXXXXXXXXXXXXSIVTPRSAGRRVVNMVSSEDLSTPYSSSSAVSKRHLLPFSSPDPRSKIARQDGGDDDGAAGLSPTSVQSPPDLARAVYAERKNAGQKVTSHNPALGLRGLAVPASPRKAGTRCDIRVDE-AVGAPARYRYMYTPLEERAASLEKCLLALQGQMESRFGL---TEVTP---VGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLRELQSFALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFV--LDIPKTGGSARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQLDMRHAQRWGMPSTPDVLLVPSRLAQFAREVQGC-LCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
            + ++  +FSK+G    D+  + KC +      L+   +A  WE++++  + + L   S+  F   + K   + T                        VTP +  +R+   V++E    P  SSS++S         P P                   P S+Q P D     Y  R  AGQ V++ +         VP S  K    C IR D  +      YR M+T  E+RA +L + LL +   +  ++ L    +V P   VG+PR +QV  VGRIC  +  GK+N  S +LEGSR +  G RV LD   +  +++FPGQ+VAL+G+N +G ++  + + EG      T++ S L ++   A    G+ L +  AAGPFTTSD+  Y+PL DLL  V+  +PDVV+L GPFVD +HP V +G   ++  +G    V +ET F  ++S  L+ L      L TQF+LVPSL D   E+VYPQPPF DRV GG++  +       +    LD  +T      +RVH  PNP  L +NEV IG++STD LF +S +E +A     +RLAR++ H+LQQ+S+YPLFPP  G    +D ++ ++W MP  PDVL++PS+LA F+R V    + VNPG+L + T GGTYA + VHP  +++L     E AD  DA +PH +  R+ VEI+RI
Sbjct:    5 QPELKNAFSKVGLKTIDEATMSKCTAAATMLRLTPQQVATCWEAYSLKKNTTTLNEQSFEGFRDLLVKE--SNTLDIPMSETNDSPRGAVLPPRSLPHVTPPA--KRLQLAVATE----PRRSSSSLS---------PGP-------------------PVSLQ-PSDK----YETRTGAGQIVSTFSAKEKRTATYVPLSRPK----CAIRKDSFSTNLSHTYRSMFTTTEQRATALNQQLLEMTKHLIDKYQLGQSDQVAPLEGVGIPRADQVCNVGRICNAAHAGKINATSCLLEGSRAEG-GVRVSLDWSGVSQYSVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTTRRSALRQYHLQAQE--GQPLKLVTAAGPFTTSDNFHYQPLQDLLHVVQQEQPDVVILTGPFVDLDHPAVQSGQTILQDEEGNDVIVPYETFFVHKISLLLEELLTEHPMLMTQFVLVPSLEDATAEWVYPQPPFQDRVPGGLQPNIPGADGITIGTMGLDYVETATELPCQRVHCVPNPCTLQINEVVIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLFPPAPGM--NMDYQYMEQWSMPCQPDVLILPSKLACFSRTVMDTTIVVNPGRLTRDTVGGTYAIMEVHPFSKDVL-----EAADD-DAELPHALPERTEVEIKRI 639          
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: A0A1Z5K576_FISSO (DNA polymerase alpha subunit B n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K576_FISSO)

HSP 1 Score: 348 bits (893), Expect = 3.440e-103
Identity = 246/705 (34.89%), Postives = 373/705 (52.91%), Query Frame = 1
Query:  157 MAAVTEAQVARSFSKIGEDPSDKDFIGKCVSLCQRFSLSASDLADHWESFAVNHDGSKLEMASWASFETEVAKSKAAETAXXXXXXXXXXXXXXXXXXXXXSIVTPRSAGRRVVNMVSSEDLSTPYSSSSAVSKRHLLPFSSPDPRSKIARQDGGDDDGAAGLSPTSVQSPPDLARAV---YAERKNAGQKVTSHNPALGLRGLAVPASPRKAGTRCDIRVDEAV------GAPARYRYMYTPLEERAASLEKCLLALQGQMESRFGL---TEVTP---VGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLRELQS-FALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFV--LDIPKTGGSARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQLDMRHAQRWGMPSTPDVLLVPSRLAQFAREVQGC-LCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
            M  + + ++  +FSK+G    D+  + KC +      LS   +A  WE++++  + + L   S+  F   + K ++            XXXXXXXXXX   +++ PRS                           H+ P   P  R ++A      +   +    +S+   P +A      Y  R  AGQ V++       +  A   +P  +  +C IR + +            YR ++T  E+RA +L++ L+ +   +  ++ L    EV P   VG+PR +QV  +GRIC  +  GK+N  S++LEGSR    G RV +DL  L S +++FPGQ+VAL+G+N +G ++  + + EG      TS+  +L ++   A    G+ + +  AAGPFTTSD+  Y+P  DLL  V+  +PDVV+L GPFVD  HP V +G   ++  DG    V +ET F  ++S  L+ L   +  L TQF+LVPSL D   E+VYPQPPF DRV GG++  +       +    LD  +T      KRVH  PNP  L +NEV IG++STD LF +S +E +A     +RLAR++ H+LQQ+S+YPLFPP  G    +D ++ + W MP  PD+LL+PS+LA F+R V    + VNPG+L + T GGTYA + VHP  +++L     E AD  D  +PH +  R+ V I+RI
Sbjct:    1 MTTMQQFELKNAFSKVGLKVIDEATMSKCTAAATMLRLSPQQVATCWEAYSLKKNTTTLNEQSFEGFRDLLVK-ESNTVNNNIPMSDEXXXXXXXXXXRGGAVLPPRSLP-------------------------HVTP---PAKRLQLAAVTNNTNTEPSSRRSSSLSPGPPVALQPSDKYETRIGAGQIVSTFT--AEHKRTATNDNPLLSRPKCTIRSESSAFSTNNNNLSQAYRSLFTTTEQRATALDQQLIHMGQHLMEKYQLGQSDEVAPLEGVGIPRADQVCNIGRICNAAHYGKINATSVLLEGSRAAVGGARVAVDLSTLSSQYSVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTSRVRDLRQYHLQAQQ--GQPVKLLTAAGPFTTSDNFQYQPWQDLLHVVQNEQPDVVILTGPFVDMNHPAVQSGQTALQDEDGNDVIVPYETFFMHKISLLLEELLTENPLLMTQFVLVPSLEDATAEWVYPQPPFQDRVSGGLQPNIPGADGITIGTMGLDYVETATELPAKRVHCVPNPCTLQINEVVIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLFPPAPGM--NMDYQYMEYWSMPCQPDLLLLPSKLACFSRIVMDTTIVVNPGRLTRDTMGGTYAIIEVHPFAKDVL-----ETADDDDE-LPHALPERTEVIIKRI 664          
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: A0A7S2FH66_9STRA (DNA polymerase alpha subunit B n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FH66_9STRA)

HSP 1 Score: 343 bits (881), Expect = 3.760e-102
Identity = 209/539 (38.78%), Postives = 310/539 (57.51%), Query Frame = 1
Query:  643 LSPTSVQSP---------PDLARAVYAERKNAGQ---------KVTSHNPALGLRGLA-------VPASPRKAGTRCDIRVDEAVGAPARYRYMYTPLEERAASLEKCLLALQGQMESRFGL---TEVTPVGVPRQEQVVVVGRICCES-AEGKMNRASIILEGSRRDSSGQRVHLDLRELQSFALFPGQVVALQGVNSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATI--ECVDGGS---ESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDIPKTGGS-ARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQ----LDMRHAQRWGMPSTPDVLLVPSRLAQFAREVQ-GCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQE 2139
             SP+S+Q+P         P      YA RKNAG          +V + +P   + G++       V   P       D    E+VG  + YR+MYT + +RAASL++    ++ ++ +  G    +  +PVGV  Q+ VV  GR+CC++  EGK+N+ SI+LEG R +  GQR+ L L++L SFALFPGQ V ++G+NSSG RMV + ++ GVPRPLP +Q ++               L +  A+GPF  +++L Y PL DLL  +     DV++L GPFVD  HP + +G   +  +  DG +   ES+D+  LF L++++ L+ +  +      Q ++VPSL D FH+ VYPQPP  D+   GV+     +PEE+ F ++IP    +    KR+HL  NPA L +NEV +G+SSTD L  +   E++   +   RL RLA H++ QQSF+PLFP   G  A     LD+  ++RW MP +PD+L++PS+LA FA  +  G L +NPGQ+A+G+GGGTYA L +HP P +    K E
Sbjct:   64 FSPSSLQTPGQKIDIVSHPVTPSKSYATRKNAGDITLEMRAKIEVPTDSPGKEINGMSRQPCHINVFGEPGSPAPESDSS-HESVGVASHYRHMYTTVMDRAASLQRSFDHMEQELLAHAGKEHSSRRSPVGVRSQDPVVCFGRVCCDTLGEGKINKTSILLEGGRMEG-GQRIELKLQDLSSFALFPGQWVLVEGINSSGPRMVVKRLMTGVPRPLPQAQITK----------KRTSPLRLVVASGPFCCTNNLDYAPLKDLL--LNANSADVLILSGPFVDVAHPQLKSGVVLMAGDTDDGATCEMESLDYCNLFNLKVTQALEDMQDAHPSSTLQIVMVPSLADAFHDCVYPQPPLTDQSRKGVKSPW--FPEEKYFDVEIPFAAQTEVTGKRMHLVSNPAMLRINEVVVGISSTDILMSMGRAEIAENPKNKQRLPRLAEHLVNQQSFFPLFPANGGVKANEDVPLDLSQSERWRMPVSPDILILPSKLATFASTLSNGTLALNPGQVARGSGGGTYANLVIHPQPNQARGVKPE 586          
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Match: A0A8K1CIP2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIP2_PYTOL)

HSP 1 Score: 344 bits (883), Expect = 4.530e-102
Identity = 234/688 (34.01%), Postives = 363/688 (52.76%), Query Frame = 1
Query:  181 VARSFSKIGEDPSDKDFIGKCVSLCQRFSLSASDLADHWESFAVNH--DGSKLEMASWASFETEVAKSKAAETAXXXXXXXXXXXXXXXXXXXXXSIVTPRSAGRRVVNMVSSED-LSTPYSSSSAVSKRHLLPFSSPDPRSKIARQDGGDDDGAAGL-SPTSVQSPPDLARAVYAERKNAGQKVTSHNPALGLRGLAVPASPRKAGTRC-DIRV---DEAVGAPARYRYMYTPLEERAASLEKCLLALQGQMESRFGLTEVTPVGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRRDSSGQRVHLDLRELQSFALFPGQVVALQGV-NSSGGRMVARGVIEGVPRPLPTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAVRVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLSEKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVGAYPEERMFVLDIPKTGGSARQKRVHLAPNPAWLCVNEVTIGVSSTDALFDLSGEEV-SAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQLDMRHAQRWGMPSTPDVLLVPSRLAQFAREVQGCLCVNPGQLAKGTGGGTYAELAVHPMPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI 2214
            V ++F+    D  D D +  C+++C  FSL+A +LA  W+++++NH  DG+  ++     F +++A+ KAA++                       ++      +R +   SS+D L+  Y+  S   K +   F+SP    K+AR         AGL SP+S+QSPP  +   Y  R +AG+ V+  N    L+   VP +     T    IRV   D  + A A Y  MYTPL ERA +L++ L+  +  +++ + L  +  V  P   QV VVGRI CE+AEGK+N + + LEGSR+   GQRV LDL  + +F ++PG++VAL+GV   +   MV +  +E VP P+PT++ + L            + L +  A+GPFTT+ ++ Y PLNDLL  VR  +PDV++L+GPF+D  H     G      V+     + FE +F  ++   LD++    + L  Q ++VPS+RD  H++VYPQPPF+ +                         G     KRVH+  NP    +N+V +GVS+ D +  LS  E+  A  +  NRL RL   ++ Q+S+YPLFPPP  + A +D+R+  ++    TPDVL++PS L +F   V   +CVNPGQL KG  GGT+A L V P+ ++ +     +        + H V  R+ V+I+RI
Sbjct:   12 VRQAFASCNLDVLD-DAVHTCIAICAEFSLTADELAAQWDAYSMNHQVDGA-ADVDKLGVFRSKLAQDKAAKSKEGSAAAASGANKRKHAKVSSTPVI------KREIKTESSQDPLNALYNMKSPEGK-NARSFASPP--GKVAR--------TAGLFSPSSMQSPPTTS---YENRTDAGKTVSEFN--AHLKKELVPMTDASENTEAVSIRVPFPDRNLKANAPY--MYTPLFERALALDEQLVEYEELIKTHYNLENIAAVADPSPAQVTVVGRIVCEAAEGKLNASVVQLEGSRKTCGGQRVLLDLSAVPNFQVYPGKIVALEGVYEDTRNPMVVKRFLEPVPAPMPTTEKARLETIYVNDQK---RPLRVVTASGPFTTTSNVSYLPLNDLLQIVREQKPDVLILVGPFIDTTHASFRDG-----LVEFDGMMLGFEDIFLFKVMAALDSILEQHKTL--QVVMVPSVRDAHHQYVYPQPPFNKKKA-------------------CEALGSPEHAKRVHMMSNPCTFAINDVVVGVSALDIVMHLSSNELYRAQARDQNRLLRLCQQVVDQRSYYPLFPPPPNAEAPIDLRYMTQFQFERTPDVLILPSMLNRFCGRVHDSICVNPGQLCKGESGGTFAALTVLPLSKDKITNSTTD-------EVAHFVPDRTTVDIKRI 637          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTZ2_ECTSI0.000e+083.50DNA polymerase alpha subunit B n=2 Tax=Ectocarpus ... [more]
A0A836CA88_9STRA1.510e-16343.15DNA polymerase alpha subunit B n=1 Tax=Tribonema m... [more]
W7TPC9_9STRA8.670e-15842.63DNA polymerase alpha subunit B n=2 Tax=Monodopsida... [more]
B8BYS5_THAPS3.920e-11934.95DNA polymerase alpha subunit B n=1 Tax=Thalassiosi... [more]
A0A7S2ERG3_9STRA5.150e-11734.92DNA polymerase alpha subunit B n=2 Tax=Ditylum bri... [more]
A0A7S2F9H8_9STRA5.780e-10751.65DNA polymerase alpha subunit B n=1 Tax=Florenciell... [more]
A0A1Z5KI39_FISSO4.540e-10635.75DNA polymerase alpha subunit B n=1 Tax=Fistulifera... [more]
A0A1Z5K576_FISSO3.440e-10334.89DNA polymerase alpha subunit B n=1 Tax=Fistulifera... [more]
A0A7S2FH66_9STRA3.760e-10238.78DNA polymerase alpha subunit B n=1 Tax=Dictyocha s... [more]
A0A8K1CIP2_PYTOL4.530e-10234.01Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2222634..2231182 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1124.4
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D8LTZ2
Preferred namePOLA2
KEGG rclassRC02795
KEGG koko:K02321
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,map00230,map00240,map01100,map03030
KEGG ModuleM00261
GOsGO:0000082,GO:0000228,GO:0000278,GO:0000428,GO:0000723,GO:0000785,GO:0000790,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005657,GO:0005658,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006270,GO:0006271,GO:0006273,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0012505,GO:0016043,GO:0016070,GO:0016233,GO:0018130,GO:0019438,GO:0019725,GO:0022402,GO:0022616,GO:0030880,GO:0030894,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032200,GO:0032201,GO:0032774,GO:0032991,GO:0032993,GO:0033260,GO:0034641,GO:0034645,GO:0034654,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0043601,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044786,GO:0044843,GO:0046483,GO:0046982,GO:0046983,GO:0051276,GO:0055029,GO:0060249,GO:0061695,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1901362,GO:1901576,GO:1902292,GO:1902295,GO:1902315,GO:1902318,GO:1902494,GO:1902969,GO:1902975,GO:1902981,GO:1903047,GO:1990234
EggNOG free text desc.DNA-directed DNA polymerase activity
EggNOG OGsCOG5214@1,KOG1625@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03032
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDNA polymerase alpha/epsilon, subunit B
Ec32 orthologEc-12_003800.1
Exons10
Model size3237
Cds size2061
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1855.1prot_P-fluviatile_contig13.1855.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 2223654..2231026 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815572.6621864-UTR-P-fluviatile_contig13:2222633..22236531622815572.6621864-UTR-P-fluviatile_contig13:2222633..2223653Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2222634..2223653 -
1693562284.8051567-UTR-P-fluviatile_contig13:2222633..22236531693562284.8051567-UTR-P-fluviatile_contig13:2222633..2223653Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2222634..2223653 -
1622815572.816479-UTR-P-fluviatile_contig13:2231026..22311821622815572.816479-UTR-P-fluviatile_contig13:2231026..2231182Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2231027..2231182 -
1693562285.306067-UTR-P-fluviatile_contig13:2231026..22311821693562285.306067-UTR-P-fluviatile_contig13:2231026..2231182Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2231027..2231182 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815572.6783545-CDS-P-fluviatile_contig13:2223653..22237301622815572.6783545-CDS-P-fluviatile_contig13:2223653..2223730Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2223654..2223730 -
1693562284.975086-CDS-P-fluviatile_contig13:2223653..22237301693562284.975086-CDS-P-fluviatile_contig13:2223653..2223730Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2223654..2223730 -
1622815572.6932552-CDS-P-fluviatile_contig13:2224531..22246431622815572.6932552-CDS-P-fluviatile_contig13:2224531..2224643Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2224532..2224643 -
1693562284.9858456-CDS-P-fluviatile_contig13:2224531..22246431693562284.9858456-CDS-P-fluviatile_contig13:2224531..2224643Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2224532..2224643 -
1622815572.7075925-CDS-P-fluviatile_contig13:2225042..22254621622815572.7075925-CDS-P-fluviatile_contig13:2225042..2225462Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2225043..2225462 -
1693562284.9962375-CDS-P-fluviatile_contig13:2225042..22254621693562284.9962375-CDS-P-fluviatile_contig13:2225042..2225462Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2225043..2225462 -
1622815572.7205083-CDS-P-fluviatile_contig13:2226016..22262051622815572.7205083-CDS-P-fluviatile_contig13:2226016..2226205Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2226017..2226205 -
1693562285.006467-CDS-P-fluviatile_contig13:2226016..22262051693562285.006467-CDS-P-fluviatile_contig13:2226016..2226205Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2226017..2226205 -
1622815572.7334898-CDS-P-fluviatile_contig13:2226427..22268021622815572.7334898-CDS-P-fluviatile_contig13:2226427..2226802Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2226428..2226802 -
1693562285.0160332-CDS-P-fluviatile_contig13:2226427..22268021693562285.0160332-CDS-P-fluviatile_contig13:2226427..2226802Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2226428..2226802 -
1622815572.7477481-CDS-P-fluviatile_contig13:2227196..22273341622815572.7477481-CDS-P-fluviatile_contig13:2227196..2227334Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2227197..2227334 -
1693562285.0247064-CDS-P-fluviatile_contig13:2227196..22273341693562285.0247064-CDS-P-fluviatile_contig13:2227196..2227334Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2227197..2227334 -
1622815572.7620208-CDS-P-fluviatile_contig13:2227888..22280751622815572.7620208-CDS-P-fluviatile_contig13:2227888..2228075Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2227889..2228075 -
1693562285.255536-CDS-P-fluviatile_contig13:2227888..22280751693562285.255536-CDS-P-fluviatile_contig13:2227888..2228075Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2227889..2228075 -
1622815572.7775922-CDS-P-fluviatile_contig13:2228858..22290861622815572.7775922-CDS-P-fluviatile_contig13:2228858..2229086Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2228859..2229086 -
1693562285.2741234-CDS-P-fluviatile_contig13:2228858..22290861693562285.2741234-CDS-P-fluviatile_contig13:2228858..2229086Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2228859..2229086 -
1622815572.7886138-CDS-P-fluviatile_contig13:2229694..22299441622815572.7886138-CDS-P-fluviatile_contig13:2229694..2229944Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2229695..2229944 -
1693562285.2856517-CDS-P-fluviatile_contig13:2229694..22299441693562285.2856517-CDS-P-fluviatile_contig13:2229694..2229944Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2229695..2229944 -
1622815572.8032162-CDS-P-fluviatile_contig13:2230941..22310261622815572.8032162-CDS-P-fluviatile_contig13:2230941..2231026Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2230942..2231026 -
1693562285.2951782-CDS-P-fluviatile_contig13:2230941..22310261693562285.2951782-CDS-P-fluviatile_contig13:2230941..2231026Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2230942..2231026 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1855.1

>prot_P-fluviatile_contig13.1855.1 ID=prot_P-fluviatile_contig13.1855.1|Name=mRNA_P-fluviatile_contig13.1855.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=687bp
MAAVTEAQVARSFSKIGEDPSDKDFIGKCVSLCQRFSLSASDLADHWESF
AVNHDGSKLEMASWASFETEVAKSKAAETAASTVVAAAATPSSSRRRPGG
ASIVTPRSAGRRVVNMVSSEDLSTPYSSSSAVSKRHLLPFSSPDPRSKIA
RQDGGDDDGAAGLSPTSVQSPPDLARAVYAERKNAGQKVTSHNPALGLRG
LAVPASPRKAGTRCDIRVDEAVGAPARYRYMYTPLEERAASLEKCLLALQ
GQMESRFGLTEVTPVGVPRQEQVVVVGRICCESAEGKMNRASIILEGSRR
DSSGQRVHLDLRELQSFALFPGQVVALQGVNSSGGRMVARGVIEGVPRPL
PTSQPSELVRFQHGADLAGGKALSIFAAAGPFTTSDSLVYEPLNDLLGAV
RVARPDVVVLMGPFVDAEHPMVAAGDATIECVDGGSESVDFETLFRLRLS
EKLDTLFASDRDLPTQFILVPSLRDVFHEFVYPQPPFHDRVEGGVELGVG
AYPEERMFVLDIPKTGGSARQKRVHLAPNPAWLCVNEVTIGVSSTDALFD
LSGEEVSAGGQGTNRLARLAGHMLQQQSFYPLFPPPAGSAAQLDMRHAQR
WGMPSTPDVLLVPSRLAQFAREVQGCLCVNPGQLAKGTGGGTYAELAVHP
MPQEMLAKKQEELADKPDATIPHDVARRSCVEIRRI*
back to top

mRNA from alignment at P-fluviatile_contig13:2222634..2231182-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1855.1 ID=mRNA_P-fluviatile_contig13.1855.1|Name=mRNA_P-fluviatile_contig13.1855.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8549bp|location=Sequence derived from alignment at P-fluviatile_contig13:2222634..2231182- (Porterinema fluviatile SAG_2381)
GCTGCGGTGGCAGCATAGCGGTCTCATCCGAGCACAGTACCTTGACGAAA GCATTCCCTGCTTCCGACACGCATTAACGCGAACGATTTTTCTTCCTGCC AACCAGGCAACTTCCACTATTCACTGCGGAACCTGCGTTTTTTTAAAACG AGCGCGATGGCGGCGGTGACAGAGGCGCAAGTCGCCCGGTCGTTTTCAAA GATTGGCGAAGACCCTTCCGACAAGGATTTTATTGGGAAATGTGAGAGGC ACGACATCAAGAGATATTAGCGAACAGGGAAGGCTTAATTGTTGTTCGTG TCGGGCTGTTGCAGGACGCTTTCGCTCTAGCAAGTATCCGCAATGAGGCA GTTCATTTTTCCAGGAGAGAAGCGAGGCATGCGTAACGCGCGTGTGCACT TTTGAGTCGATCCCTCGTCTCGGCGCCTGGCAGCGAGACGCCGCTGGTTA AGTCAGCCCCATTATTTCATACACCGTGTAGTTTATGTGGGTTACGGTTG TTTTGCAAGCGCTCTCTCCTGAAAAAAAAAAAAAAAAGGTTTGGGAGTTT GAAAATGCCGCCTGCGAAAACCGCTCTCAAAGTTCAAATAGTGATCCAAC AGAGCCCCAATTCCTTCGGCGTCTGCCCTGTCTTTCTCTTCCTCTCCCAC TCCCTCTCGCTTTTTCTCACACACACACTCGCACACCTAAAACACACAAG CCAAGAACGTGAAATCGTGGCGTCTGCTGTACATCCGGGTCGTCGTCGTG GCGTCCGAGCGCATGTACACGGTCAAGCATCGGACACCATCATTACTCAA GGCGACACGCGTAGCTCGTCGCAAGAGAACGGCATCGCCAAGGCGCCACA CCGACCTCACACAATGCATGCAGCATGCCGACCTGCATGACCCCCCCCTC ACGTCTTTGCCTTGGGAATATGGATGCATCCGCTCCGAAATTGGACTGTA ATTGGTCAGAACAGATATCACAGGAAGGTGGACAACATCCTACCTGCAGT TTTCTGTTGGCTCAGGAAAAACAACCCTCAGCATATCGATGTGTGCTACA AGTTGCGGCGCCTCAATGCAGCAACCAATCAATCGCACGCCTACTTTTTC TCTCCCTTCCCGTCTCTTGCTCTCCCTCCGATCCTCCCTCCCTCCCTCCC CCCGCCACCCCTCCTCGCTCTATCTCCCTCCCTACTCCCTCCGAACCTTC GCTACCCCCCCCCACGGCCCGGCTCGGCCACCAACCAGGCGTTTCTCTTT GCCAACGGTTCTCCCTGTCGGCGAGCGACCTCGCCGACCACTGGGAGTCG TTCGCCGTCAACCACGACGGCAGCAAGCTGGAGATGGCGTCGTGGGCCAG CTTCGAAACGGAGGTTGCGAAGAGCAAGGCAGCAGAGACGGCGGCGTCGA CGGTAGTAGCTGCTGCTGCCACGCCGTCGTCTTCTCGGAGGAGGCCTGGT GGTGCTTCTATCGTGACGCCACGCTCAGCCGGTCGAAGGTGTCTTTGCGT GTTCATTTGTGGAGTTTGATCGCATTTGAGAGGGGACAAGGGGGGGCAGC GGGGCAGAAAGGCTGGATAACATGCGCACAATGAACCTTTCGTGCGCTCC CTGTTGTGGCACGAACGGCGGGCGGGGAAGGGTAGAGGTTGCTCGGGGAA TGATGTTCGGCGATCTCGACCCTGAGGGCCGCGCGGTAGAATGGGTCCAC CTCATTTGATATGCCGCGTGCTGGGCTCCTGTTCGAGCGGTTGAAGGCGT GGTGATGGTTTGATGGTACCCACGACGTCGCAAACGGCGAAGTTTTTAAA ACGCGGCGGACAGGCAGCCGGTTAACGGTATTTCACGACAGCAGGTATTC CGGGCGGTGAGTTTGGAACTTCTGAGTTCTGAAATACCCACCACGCCCGG AACATTCTTGAAGGCTTTGATTACAGGTGATTTGTATGCAAATCGCAGCC ACCGGCAACACCATTTTACTTTGTAGACGACACGCCGCCGCTGCTGAGGC GTGCGATCGAGTCTCCTATCCCGTCCATTCCACACACCCTCCTTGCTCTC CTCTGACCTCCGCTTCCCACCATCCGCACTAAAAAACATGAACCAGGGTT GTCAACATGGTCTCCTCGGAAGATCTAAGCACCCCCTACTCCTCCTCCTC CGCGGTTTCAAAGCGGCATTTGCTGCCGTTCTCCAGCCCGGACCCTAGGA GCAAGATTGCTCGCCAGGACGGAGGGGACGACGACGGGGCAGCCGGCTTG TCCCCCACCTCGGTGCAATCGCCGCCCGACCTCGCGCGGGCTGTGTACGC CGAGCGAAAAAACGCCGGGCAAAAGTGAGAGCCTTGTTATGTCCACATGG AAACGGTGCCGAGGGCTTGCTTTTTTGGAAGTAATGAAGACATTCAGAAT CGAAGCTCTGCTGTCATTTACTGTTGACATCCTCTGCATGTCCATCATCG CTGTATGGGTCATTTTTTCCGTCGTCTTCCCCTTATCCCCTTGTTGTTGA TGTTTGCGACGTTATGCCGCTGCAGTTGAGATTTGTGAGGATATCCTGGT GTTTGTGATTGTTTCGTGTTGCGGCCGCAGTGTGGTGCCCGGCACCCACA ATTACATGCCCTCTCTTTGATTTCAGGGGGTTGTTCTTCTGCTCGCGTTC TGAGCGAAGCGGGTAGAATGGGCAGATAACAGGTGGGGGGTGAGCATTCA AGCTCCATTTCTTCATTTGAGCGGACGAAAGCAACGGGTGGTCGATGAGA CAAGCGTCCCGTGCGCCTCGGTAGAGCAAAACCGTGAAAAGCCCAGTTAT TCCACGGAAGGGGGAGAGGGAAAACAGCGAGATCGAGCTATTGAGAGAGA AACGAGCCAGGCATGCAGTGATTGGGGGGATGGGGCAGAGAAGGGGAGGC AAGAAGCATAGAAACGAACGCTAATTTTTCTTGCGTGGCAGTGGACTTGT GCCCACCCGCTGTCCCCCTTTGAGGCTGCGGTGTTTGTGGAAGAGTTCTT TTTCGGGCGTGCACAAACGCATAGATGTGCACAGCTCCCAACACCATCTT CGCCTTGCGCTTTCACCTCACTCCTTGCAATTTCCCGTCCCGTCCTCGTC CCGCAAGGGTCACGTCCCACAACCCGGCCTTGGGTCTGCGCGGGTTGGCC GTCCCCGCCTCCCCGAGGAAGGCCGGTACCCGCTGCGACATTCGGGTAGA CGAGGCGGTCGGAGCGCCTGCGCGGTACCGGTACATGTACACGCCGCTGG AGGAGAGAGCCGCCTCCCTCGAGAAGTGTCTTCTTGCGCTACAAGTGTGT AATCTACAGTTGTGCGCCTTGCTGCGCCCTGACGAGGCGAACTGTAACGT GATTGGCTTAGACGACGTGAAATGGCTTGGAGGGATTATCTACATTTGAA GCGCGATATTTGCGCCAGCGTGAATTTTGCCACCAATGCGGTGTGCGGTA CGTGATGTTACGGTGGGGCGGCAGGGGTGGTGTATGGGGTGCCCGACTCC CCCTCTGTTTCCGAATGAGTCAACGACGCCATCCTTGCTGTTTGAACGCT TGAGCGCGGGTCTGCTCTGCATCGTCATTGTAATGTTTCGGCGGCATCGC TCTCACGATATCTGGCTACAGCGGCTACGGACGATAGAAACAACACCAAG GCCGCCTTCCGCCGGAGTGCGCAAGCGGCCCGAGACCGTGTCGGTGTTCT GGTCGTCCTGAATGAAGATTTTGTTGGAAATGTGGCGGTTTAGGCAGGGG CTGCGTTGTCGCGCGCATCCGAGACCATGACCGCGAACGATCTGGTTCCG TTGGTGGACATCTTATTTGTTTTTCTACTGTATTTGATTCCATCGCAGGG ACAAATGGAGAGCCGGTTTGGGCTGACGGAGGTCACCCCTGTCGGAGTGC CAAGACAGGAGCAGGTGGTGGTGGTGGGACGTATCTGCTGCGAGTCGGCG GAGGGCAAAATGAACCGGGCGTCCATCATTCTGGAGGTGATTTATTTTGG GGCGGCGACGGTACTGTCGGTGCTTGTTTTGTTGGTGGTGGTGGTAGGGG GGGGGGAGTGGTGGTGATGATGGCGATGATCGTGGTAGTGGCAGCGGTTG TTGTGGTGATAGTGCATTATGGGACGTGGGCGCGCTGCACGGCAGATGAG GCGTCGACAGGAAACTGAACGAGCACCCTTCCTTCGCCGGCGACGCTGTC AGAGCTCAACGCGCATTGCTCCCCTCCCCTCTCTCTCACATCTACTCTGA TCTCTGATCAATGCTGTCATTCCTGCCGCCTTCCGCCTTCCGCCTCCCGC ACGCACCTGCCCCCGTCCCTCCCCGTCCTGCTGCGCCTCCTGCCTCACGT CGCCCCCCCAACCCCGCTTCTCCGGGTTAGGGTTCCCGCCGCGATAGTAG CGGGCAGCGGGTGCACCTCGACCTGCGGGAGCTGCAGTCCTTCGCGCTTT TCCCGGGCCAAGTGGTGGCGTTGCAGGGCGTCAACAGCTCCGGCGGCCGC ATGGTGGCCCGCGGGGTCATCGAGGGGGTGCCGCGGCCGCTCCCGACGTC GCAGCCCTCCGAGCTGGTCAGGTTCCAGCACGGGGCGGACCTCGCCGGCG GCAAGGCGCTGTCCATCTTCGCGGCGGCGGGGCCGTTCACGACGAGCGAC AGCCTGGTGTACGAGCCGCTGAACGACCTGCTCGGCGCGGTTCGGGTGGC CAGGCCGGATGTGGTGGTGCTCATGGGACCCTTCGTCGACGCGGAGCACC CTATGGTGTGTGTGTGTGTGTGTGTGCGTGTTGTGCCGAAACTCAGTAAA TACCTGCTGCGGCAAATCATATTCAGAGACACGCACCCGTGATTTTCATA TTTTTAGCGTTTGTTGTCTTTGCCCCGCTGACACTGACGATTGTTCAGTC CGAGCAGCCGGGTTCGCGCGGTCTTGACTATGGACGAAAAACGCGACGCA CGCACGCGCGCACGAAACCCGACACAGGTGGCCGCCGGGGATGCGACGAT CGAGTGTGTCGACGGGGGATCCGAGTCGGTGGACTTCGAGACCCTTTTCC GGCTGCGGCTCTCGGAGAAGCTGGACACTCTCTTCGCCAGCGACAGGGAC CTCCCCACGCAGTTCATCCTCGTGCCGTCCCTCCGCGACGTCTTCCACGA ATTCGTCTACCCTCAGGTGGGCATTTCTCCTTCACATGCCTGCCGGTTTG ACGCTGTTTTTTTCTTTTGCGGGCGTGCGGTCTGTATCTCTATGATGGCG AGGGGGACGGTTCGGTAGGGCAATTACGGGATGGTTCGGTGCAGCTCTGA CGCACTTCTCATGCGATACGGCTATTTTTGCCACGCGCGGCATTCCTGCA TCGGAGTCTGCGCCGGAGCACGTCTGACGATGGATCTCGAGATGCAAATA CGTGAGTGATGCACAAGACGCTACGCTCGTGCTTCGCGGGCGAGCGGAAC ACAATCGTCTTTTCTCTTTTGGTGTTTCAGTCATCTACTGTTTAACCGCT CGATATCTCCGTTTAACACGCGCTGTCGTAAGATGAAGGCAAGAGTCTGT TGGGACCCGGAATGAATGCTGATATCGTTCACCTGTTTGTGCGCTTCCCA CGCGCTTCCCACGCTGCCCCTTTTCCATTTTTCCGATGTCAACAAAAAAA TTTGGGATTCAAAAATCATTCACAAAAAACCTCATCGACGCAAAAATAAC ACACAATACAACGAAAACAGCCTCCATTCCACGACCGAGTGGAAGGAGGC GTTGAGCTAGGCGTCGGAGCGTACCCAGAGGAGCGAATGTTCGTGCTCGA CATCCCCAAGACGGGGGGCTCCGCAAGGCAGAAGCGGGTGCACCTCGCCC CCAACCCGGCCTGGCTGTGCGTGAACGAGGTAACCATCGGGGTGTCCTCC ACGGACGCCCTGTTCGATCTCTCCGGGGAAGAGGTCAGCGCCGGAGGGCA GGGCACGAACCGGCTGGCGCGGCTGGCGGGCCACATGCTGCAGCAGCAGT CGTTCTACCCGCTGTTCCCGCCGCCGGCCGGGTCGGCGGCGCAGCTGGAC ATGCGTCACGCGCAGCGCTGGGGGATGCCTTCGACGCCTGATGTACTGCT CGTGCCGTCCAGGCTCGCGCAGTTTGCGCGGGAAGTGCAGGTGGGTCGCC GGACACGAATGCAGGTGCAGTTGCAGATGCAGCTGGCGGGGGGGTTGGGG GATGGAGTTCGATTCTTATGGTTCTGCCCGGGGGCGTCACTTCTGTGAGG GGATTGTGGCTGATGATGATGGTGTCTTTGACGCGACATTAGTGCTGTTG GTGGTGATGCTCGAGGGCTGTGATGATAGTCGGGGGTCCTTGCCGTGTAA TTCGGGATTGGGGAGACGTGACGATCGTGCTGTAGCTCGTTTTCGTTATT CTTCCTTCTTGTATTTCTCTGGTCCTGCCACGCGGTCTCGACCTTAAGCT CTTCATGCGTCGTTCCCTCTCCTCGGCCTCTCGTCGTTCTTTCTGTCCCA TTTTGCTCTCTGCCCCCGTTCGTTCTTCCCTCTGGCCAGGGCTGCCTTTG CGTGAACCCGGGCCAGCTGGCGAAGGGCACCGGCGGAGGCACCTACGCCG AGCTGGCCGTGCACCCGATGCCCCAGGAGATGTTGGCCAAAAAGCAGGAG GGTGAGTGAAAGTGCCTCGCTCATCTTTTCTCGCGAAGCAGCACAGCGTG AAGGGAAGGGGCGAATGGCTGCCGGCGCGTGTCGCCATCTGTCTGCCAGC AGCACCAGATCGTTGGCTCTTGGTTTCGTCTCCTGCTTCTATTGCTTGGT TCCTTGGACGCATTTGGTGCGCTACGTTTTGCGGCACGAACATTCGTGCG ATGGAAAATGCCATGACGTTTTCCTTATTTTTGCACCTTCCGACTTTCAA ATCGCCAACGAACAACAGCTCCCCCTTAAAGGTACAGGCAGATGCATTCT AGCTTGTTCCCGTGCATCCATCCCGCGCTGCTTGTGCCAGACCAACCCAC TTTCCGGCCACCCGATGCATTGCCTGTCACCCCACCCCGCCTATCGCTAG TTGAAATGCGGCCGAGTGTTACGAACACGTTTGCACCTTTGCGATTCAGG ACTGTGAACGACCCTTGACTTAAGCATGATAGACTACCTTCCCTTCCCCT GTGTCTCCTCCACTCCCTCCTTCCCTTTAGATCTCATCACACCACCGCGG CAGGGCCATGTGCATCTCCTCCTTTCCCTCCCCCTCGCTTCCTCTGTACA CCATGCCCCCTTGCTGCCCCTCCCCGAATTTGTTTTCAACTTCAACGGTG GGTGTCAAGCCGTGACTGATTCCCCCATCCCCGCCCTCACCGCCCCCGCC GCCCCTATCGTTAATTACCTGCATGTCCATATTGCGCCTCGTCGATCGGT CGCGACACGGTCACGCACTTGGCGCCTGTCCTCGTCCTCGTGACGTGTAC AGAGTTGGCGGACAAGCCCGATGCCACCATCCCGCACGACGTGGCCAGGC GGTCGTGCGTAGAGATCAGGAGAATCTAGTTGTCGTTTTTTATTTTTTAT TTACAGGATTGCACCCCGGGGGGGAGTCCGATCGCGAGGCAGGCAAGCAG GAGCGGGCCCAATGGAGATGTGGCTAACTTTGTAGGGAGGGAGGAGTAGA AATGCGCGTGCAGGGGCGTTTTGAAGGAAGGATTGATCAAAACGACAGGA CGAGGACAAATGGCGAGGTAGATGCGATAATCACCCTCAAGTGATCAGGA CGTTAGAGATCGCAGGGAAGGCGAGGCGCGGTAGATGGGTTCTGACAACT GGGCAGTTCCAGCGCTAAACGAGACATATCGAGGTGAAAGGGTGTCCAGT AATACACCAGCCACAGAGGCACTTTGGGGGTTGGTAAGTCACGCTGGCTC CAGCTCTGCCGCAGAGCTACCATTTCTCGTTCGCAGTGGATGGGTTATCT GTGTCTGCTTTGTTGATGTTGAAAAAAACGCTGGCGACGAGAGATCCGCG ATTGAAGATAGGTCTTTAGTCCGAGACGGTAGGTAGGTGATGAAACTGAG GTTGCTGTGGCGGAAAACCCGCTTTACTTAATACTGCAACTACATCGACC ATGCGGTGGTCTACAGCTTCTGCCACAACTCGCGATTCATTTCTAGGCGA CAAGTGCTCCGAAAGAGGCACTGACAGCGTTTGGGGAAAGGCAGTGAGAT AGTTTGGTCTTATTTCGACCCTCGTCTGGTGTGAGTTTGGTCTGTGCTCG TCGTTAGGTGCAACCAGCTCTTCTTCGTGTCCCCGTCAGAAGAAAATGGT GCACTTTTTTTAAAGATCTTGCTGTGTAAATGCTACCGAGAGTTTGCGGT CAACGAGTCTGTCGATTTTTTTACTTATTAAAGTACGATGTACAACGGAG TATTTTCTGTCTTTCTGCAGCGTGTGCCTTCATCACTTCCCCCTTTCTCT GGCCAACGAGGTCTGTCGGCTCCTTTTTGAATGCAGAGATAACTCGCAAG GGACGACCACACATATTGGAATTTGTGATTTCACAAATCATCGTCCCCC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig13:2222634..2231182-

>mRNA_P-fluviatile_contig13.1855.1 ID=mRNA_P-fluviatile_contig13.1855.1|Name=mRNA_P-fluviatile_contig13.1855.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4122bp|location=Sequence derived from alignment at P-fluviatile_contig13:2222634..2231182- (Porterinema fluviatile SAG_2381)
ATGGCGGCGGTGACAGAGGCGCAAGTCGCCCGGTCGTTTTCAAAGATTGG
CGAAGACCCTTCCGACAAGGATTTTATTGGGAAATATGGCGGCGGTGACA
GAGGCGCAAGTCGCCCGGTCGTTTTCAAAGATTGGCGAAGACCCTTCCGA
CAAGGATTTTATTGGGAAATGCGTTTCTCTTTGCCAACGGTTCTCCCTGT
CGGCGAGCGACCTCGCCGACCACTGGGAGTCGTTCGCCGTCAACCACGAC
GGCAGCAAGCTGGAGATGGCGTCGTGGGCCAGCTTCGAAACGGAGGTTGC
GAAGAGCAAGGCAGCAGAGACGGCGGCGTCGACGGTAGTAGCTGCTGCTG
CCACGCCGTCGTCTTCTCGGAGGAGGCCTGGTGGTGCTTCTATCGTGACG
CCACGCTCAGCCGGTCGAAGGCGTTTCTCTTTGCCAACGGTTCTCCCTGT
CGGCGAGCGACCTCGCCGACCACTGGGAGTCGTTCGCCGTCAACCACGAC
GGCAGCAAGCTGGAGATGGCGTCGTGGGCCAGCTTCGAAACGGAGGTTGC
GAAGAGCAAGGCAGCAGAGACGGCGGCGTCGACGGTAGTAGCTGCTGCTG
CCACGCCGTCGTCTTCTCGGAGGAGGCCTGGTGGTGCTTCTATCGTGACG
CCACGCTCAGCCGGTCGAAGGGTTGTCAACATGGTCTCCTCGGAAGATCT
AAGCACCCCCTACTCCTCCTCCTCCGCGGTTTCAAAGCGGCATTTGCTGC
CGTTCTCCAGCCCGGACCCTAGGAGCAAGATTGCTCGCCAGGACGGAGGG
GACGACGACGGGGCAGCCGGCTTGTCCCCCACCTCGGTGCAATCGCCGCC
CGACCTCGCGCGGGCTGTGTACGCCGAGCGAAAAAACGCCGGGCAAAAGG
TTGTCAACATGGTCTCCTCGGAAGATCTAAGCACCCCCTACTCCTCCTCC
TCCGCGGTTTCAAAGCGGCATTTGCTGCCGTTCTCCAGCCCGGACCCTAG
GAGCAAGATTGCTCGCCAGGACGGAGGGGACGACGACGGGGCAGCCGGCT
TGTCCCCCACCTCGGTGCAATCGCCGCCCGACCTCGCGCGGGCTGTGTAC
GCCGAGCGAAAAAACGCCGGGCAAAAGGTCACGTCCCACAACCCGGCCTT
GGGTCTGCGCGGGTTGGCCGTCCCCGCCTCCCCGAGGAAGGCCGGTACCC
GCTGCGACATTCGGGTAGACGAGGCGGTCGGAGCGCCTGCGCGGTACCGG
TACATGTACACGCCGCTGGAGGAGAGAGCCGCCTCCCTCGAGAAGTGTCT
TCTTGCGCTACAAGGTCACGTCCCACAACCCGGCCTTGGGTCTGCGCGGG
TTGGCCGTCCCCGCCTCCCCGAGGAAGGCCGGTACCCGCTGCGACATTCG
GGTAGACGAGGCGGTCGGAGCGCCTGCGCGGTACCGGTACATGTACACGC
CGCTGGAGGAGAGAGCCGCCTCCCTCGAGAAGTGTCTTCTTGCGCTACAA
GGACAAATGGAGAGCCGGTTTGGGCTGACGGAGGTCACCCCTGTCGGAGT
GCCAAGACAGGAGCAGGTGGTGGTGGTGGGACGTATCTGCTGCGAGTCGG
CGGAGGGCAAAATGAACCGGGCGTCCATCATTCTGGAGGGACAAATGGAG
AGCCGGTTTGGGCTGACGGAGGTCACCCCTGTCGGAGTGCCAAGACAGGA
GCAGGTGGTGGTGGTGGGACGTATCTGCTGCGAGTCGGCGGAGGGCAAAA
TGAACCGGGCGTCCATCATTCTGGAGGGTTCCCGCCGCGATAGTAGCGGG
CAGCGGGTGCACCTCGACCTGCGGGAGCTGCAGTCCTTCGCGCTTTTCCC
GGGCCAAGTGGTGGCGTTGCAGGGCGTCAACAGCTCCGGCGGCCGCATGG
TGGCCCGCGGGGTCATCGAGGGGGTGCCGCGGCCGCTCCCGACGTCGCAG
CCCTCCGAGCTGGTCAGGTTCCAGCACGGGGCGGACCTCGCCGGCGGCAA
GGCGCTGTCCATCTTCGCGGCGGCGGGGCCGTTCACGACGAGCGACAGCC
TGGTGTACGAGCCGCTGAACGACCTGCTCGGCGCGGTTCGGGTGGCCAGG
CCGGATGTGGTGGTGCTCATGGGACCCTTCGTCGACGCGGAGCACCCTAT
GGGTTCCCGCCGCGATAGTAGCGGGCAGCGGGTGCACCTCGACCTGCGGG
AGCTGCAGTCCTTCGCGCTTTTCCCGGGCCAAGTGGTGGCGTTGCAGGGC
GTCAACAGCTCCGGCGGCCGCATGGTGGCCCGCGGGGTCATCGAGGGGGT
GCCGCGGCCGCTCCCGACGTCGCAGCCCTCCGAGCTGGTCAGGTTCCAGC
ACGGGGCGGACCTCGCCGGCGGCAAGGCGCTGTCCATCTTCGCGGCGGCG
GGGCCGTTCACGACGAGCGACAGCCTGGTGTACGAGCCGCTGAACGACCT
GCTCGGCGCGGTTCGGGTGGCCAGGCCGGATGTGGTGGTGCTCATGGGAC
CCTTCGTCGACGCGGAGCACCCTATGGTGGCCGCCGGGGATGCGACGATC
GAGTGTGTCGACGGGGGATCCGAGTCGGTGGACTTCGAGACCCTTTTCCG
GCTGCGGCTCTCGGAGAAGCTGGACACTCTCTTCGCCAGCGACAGGGACC
TCCCCACGCAGTTCATCCTCGTGCCGTCCCTCCGCGACGTCTTCCACGAA
TTCGTCTACCCTCAGGTGGCCGCCGGGGATGCGACGATCGAGTGTGTCGA
CGGGGGATCCGAGTCGGTGGACTTCGAGACCCTTTTCCGGCTGCGGCTCT
CGGAGAAGCTGGACACTCTCTTCGCCAGCGACAGGGACCTCCCCACGCAG
TTCATCCTCGTGCCGTCCCTCCGCGACGTCTTCCACGAATTCGTCTACCC
TCAGCCTCCATTCCACGACCGAGTGGAAGGAGGCGTTGAGCTAGGCGTCG
GAGCGTACCCAGAGGAGCGAATGTTCGTGCTCGACATCCCCAAGACGGGG
GGCTCCGCAAGGCAGAAGCGGGTGCACCTCGCCCCCAACCCGGCCTGGCT
GTGCGTGAACGAGGTAACCATCGGGGTGTCCTCCACGGACGCCCTGTTCG
ATCTCTCCGGGGAAGAGGTCAGCGCCGGAGGGCAGGGCACGAACCGGCTG
GCGCGGCTGGCGGGCCACATGCTGCAGCAGCAGTCGTTCTACCCGCTGTT
CCCGCCGCCGGCCGGGTCGGCGGCGCAGCTGGACATGCGTCACGCGCAGC
GCTGGGGGATGCCTTCGACGCCTGATGTACTGCTCGTGCCGTCCAGGCTC
GCGCAGTTTGCGCGGGAAGTGCAGCCTCCATTCCACGACCGAGTGGAAGG
AGGCGTTGAGCTAGGCGTCGGAGCGTACCCAGAGGAGCGAATGTTCGTGC
TCGACATCCCCAAGACGGGGGGCTCCGCAAGGCAGAAGCGGGTGCACCTC
GCCCCCAACCCGGCCTGGCTGTGCGTGAACGAGGTAACCATCGGGGTGTC
CTCCACGGACGCCCTGTTCGATCTCTCCGGGGAAGAGGTCAGCGCCGGAG
GGCAGGGCACGAACCGGCTGGCGCGGCTGGCGGGCCACATGCTGCAGCAG
CAGTCGTTCTACCCGCTGTTCCCGCCGCCGGCCGGGTCGGCGGCGCAGCT
GGACATGCGTCACGCGCAGCGCTGGGGGATGCCTTCGACGCCTGATGTAC
TGCTCGTGCCGTCCAGGCTCGCGCAGTTTGCGCGGGAAGTGCAGGGCTGC
CTTTGCGTGAACCCGGGCCAGCTGGCGAAGGGCACCGGCGGAGGCACCTA
CGCCGAGCTGGCCGTGCACCCGATGCCCCAGGAGATGTTGGCCAAAAAGC
AGGAGGGGCTGCCTTTGCGTGAACCCGGGCCAGCTGGCGAAGGGCACCGG
CGGAGGCACCTACGCCGAGCTGGCCGTGCACCCGATGCCCCAGGAGATGT
TGGCCAAAAAGCAGGAGGAGTTGGCGGACAAGCCCGATGCCACCATCCCG
CACGACGTGGCCAGGCGGTCGTGCGTAGAGATCAGGAGAATCTAGAGTTG
GCGGACAAGCCCGATGCCACCATCCCGCACGACGTGGCCAGGCGGTCGTG
CGTAGAGATCAGGAGAATCTAG
back to top