mRNA_P-fluviatile_contig13.1844.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1844.1
Unique NamemRNA_P-fluviatile_contig13.1844.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: D8LS41_ECTSI (Uroporphyrinogen-III synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS41_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 5.790e-107
Identity = 225/397 (56.68%), Postives = 249/397 (62.72%), Query Frame = 2
Query:  242 PWAASMFLAACICVLLAVTPSCGGFHAASASIPHKRYDQQRSHGARCNSLTSGSGGGSGDSARFSTARACSP--GEVALTREAGKNEKLAALLAEDGISSVEVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQP--PVQVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLP--PVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDALAA 1414
            P   ++ L A  C+ LAV+ +       S  I H+++ +        +S   G G   G  AR STAR C+    EVALTREAGKN KLA LL + GISSVEVPCIAHQDGPDLPLLPAAL DP L+YVV+TSPEAAKVFLAGW  AG P  PV VA VGKATGDAL  GGV+PVFTPSKA GETLAAEIPL P  P                               GP       RVLYPASA+AQ T+E+GL+ARGF+VRRLNTYDTVPA+W+E  EAAAAGA+VAAFGSPSAVKTWAARMGVV     AGV                                     ALAACIGETSARACREAGW ESAIFYPEKPGMEGWAKA+  ALAA
Sbjct:    7 PSTTAVALVAAACLPLAVSFN-------SIRIAHEQHQRHFGRSPEWHSGIIGRGETVGH-ARPSTARGCASRGAEVALTREAGKNGKLAKLLTDAGISSVEVPCIAHQDGPDLPLLPAALADPGLAYVVVTSPEAAKVFLAGWAKAGVPGVPVPVACVGKATGDALRAGGVSPVFTPSKATGETLAAEIPLPPSAPADDTXXXXXXXXXXXXXXXXXXXXXXXXXXXGP-------RVLYPASAKAQNTLESGLRARGFEVRRLNTYDTVPATWDESAEAAAAGASVAAFGSPSAVKTWAARMGVV----AAGVX--------------------XXXXXXXXXXXXXXXGALAACIGETSARACREAGWAESAIFYPEKPGMEGWAKAVGQALAA 364          
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: A0A835YHW0_9STRA (Uroporphyrinogen-III synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHW0_9STRA)

HSP 1 Score: 237 bits (605), Expect = 3.090e-70
Identity = 153/322 (47.52%), Postives = 177/322 (54.97%), Query Frame = 2
Query:  464 VALTREAGKNEKLAALLAEDGISSVEVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQPPVQVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDALAAAKQKV 1429
            VALTREAG N KL ALL   GI+ VEVPCIA  DGPD   LP  L   +  YV++TSPE+AKVFL  W++A +P V VA VG ATGDAL   G+ P FTPS+A GE LAAEIPL PP   V   GA                               RVLYPAS RA  TV+ GL+ARGF V RLNTYDT  A+W++   + AA AAVAAFGSPSAVK W + MGV                                              A AACIG TSA+A + AGW +  IF+PEKPGM GWA+A+ +ALA   QKV
Sbjct:   36 VALTREAGNNGKLEALLVAKGINCVEVPCIAFTDGPDSAQLPQHLASGAYDYVIVTSPESAKVFLQAWDAAERPNVSVACVGTATGDALRARGLEPAFTPSRAYGEDLAAEIPL-PPSAAVGEGGA------------------------------PRVLYPASTRAPGTVQEGLEARGFHVVRLNTYDTGAAAWSDADLSNAARAAVAAFGSPSAVKAWVSHMGVE--------------------------------------------AAAAACIGVTSAKAAKAAGWADDRIFWPEKPGMPGWAQAVEEALAGVPQKV 282          
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: L1JFY6_GUITC (Uroporphyrinogen-III synthase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JFY6_GUITC)

HSP 1 Score: 205 bits (521), Expect = 3.750e-58
Identity = 137/315 (43.49%), Postives = 165/315 (52.38%), Query Frame = 2
Query:  464 VALTREAGKNEKLAALLAEDGISSVEVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQPPVQVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDAL 1408
            VALTRE GKN KL   L+E G+ +VE+PCIA + G D   LP+AL +    YVV+TSPEAA VFL  W  A QP +QVA VG  T  AL  GG+ PVF PSKA G+TLA E+P      G   +G                                RVLYPASA+A+  V+ GL ARGF V RLNTYDTV A+W+E+    AA AAV A  SPSAVKTWA R+G                                              +  AACIGETSA AC+E G+    +F+PE PG+ GWA+A+ DAL
Sbjct:   24 VALTRELGKNLKLEKALSEKGVRTVELPCIAFEAGIDSDSLPSALKE-DWEYVVVTSPEAASVFLDAWRLASQPSLQVACVGTGTKQALQEGGIEPVFMPSKATGKTLADELP------GPQGNG--------------------------------RVLYPASAKARTEVQGGLTARGFTVTRLNTYDTVSATWSEQELQMAASAAVVALASPSAVKTWAERLGT---------------------------------------------KQYAACIGETSASACKELGFEH--VFWPESPGIPGWAQAVHDAL 252          
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: A0A7S0HHZ2_9CRYP (Uroporphyrinogen-III synthase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HHZ2_9CRYP)

HSP 1 Score: 206 bits (525), Expect = 6.460e-58
Identity = 136/315 (43.17%), Postives = 164/315 (52.06%), Query Frame = 2
Query:  464 VALTREAGKNEKLAALLAEDGISSVEVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQPPVQVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDAL 1408
            VALTRE GKN KL  +L+E GI +VE+PCIA + G D   LP AL +    YVV+TSPEAA VFL  W  AG+P + VA VG  T  AL  GG+ PVF PSKA G+TLA E+P                                   GP R     RVLYPASA+A+  V+ GL ARGF V RLNTYDTV A+W+++     A AAV A  SPSAVKTWA R+G                                              +  AACIGETSA AC+E G+    +F+PE PG+ GWA+A+ DAL
Sbjct:   88 VALTRELGKNSKLEKVLSEKGIRTVELPCIAFEAGTDAETLPKALQE-EWEYVVVTSPEAASVFLDAWREAGEPSLPVACVGAGTKQALQEGGIEPVFMPSKATGKTLADELP-----------------------------------GPRRSG---RVLYPASAKARTEVQGGLTARGFSVTRLNTYDTVSATWSDKELQMGASAAVIALASPSAVKTWAERLGT---------------------------------------------KQYAACIGETSAAACKELGFEH--VFWPESPGILGWAQAVHDAL 316          
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: A0A7S4JXA4_9STRA (Uroporphyrinogen-III synthase n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXA4_9STRA)

HSP 1 Score: 201 bits (511), Expect = 6.050e-56
Identity = 139/329 (42.25%), Postives = 170/329 (51.67%), Query Frame = 2
Query:  464 VALTREAGKNEKLA-ALLAEDGISSV------EVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQPPV-QVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDALAAAKQK 1426
            VALTRE GKN KL  ALL+   I         E+PCI H DG D   L   L + S  YV +TSPEAA+V  + WE AG+P + ++A+VGKATG+AL   G+   F PSKA  +TL  E+P                   DD  A GR                  +LYPASA+A+ T++ GL+ RGFDV RL+TYDTVPASW+E     A  A VA F SPSAV  W   +G    G G G +                  GD                  AACIGETSA+ CR+ GW E  I+YPEKPG+EGWA A+ DAL A  +K
Sbjct:   62 VALTREDGKNSKLLRALLSHPRIGDAIPVDIEEIPCIEHADGDDYDRLGPTLKERSFDYVAVTSPEAARVLASAWEGAGRPSMGKIAAVGKATGEALIALGIEVDFVPSKATAKTLVEELPPS-----------------DDATAEGR---------------PTTLLYPASAKARPTLQNGLEGRGFDVTRLDTYDTVPASWSEDRTDLAREAGVACFASPSAVNAWVENLG----GEGEGCS------------------GD----------------VAAACIGETSAQGCRDMGWDEGDIYYPEKPGVEGWANAVADALEAIAEK 320          
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: A0A1Z5JYL0_FISSO (Uroporphyrinogen-III synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYL0_FISSO)

HSP 1 Score: 195 bits (496), Expect = 4.180e-54
Identity = 129/316 (40.82%), Postives = 151/316 (47.78%), Query Frame = 2
Query:  467 ALTREAGKNEKLAALLAEDGISSVEVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQP-PVQVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDALA 1411
            A TRE GKNE+L   +    +  VE+PCIAH DGPD   L   L +    YV ITSPEAA+V  + W+    P P  V +VGKAT DAL   G+   F PSKA  E L  E+PL                                   P + +   +VLYPAS RAQ T++ GL  RGF V RLNTYDTV A WNE     AA   +A F SPSAVK W                                         +   N A+    LAACIGETSA+ACRE GW E  IFYPEKPGMEGW  A+ +A A
Sbjct:   50 AATREQGKNEQLMKGIRGIHLHPVELPCIAHADGPDFSSLQETLQNNHWDYVTITSPEAARVLSSAWQHCTWPTPPAVVAVGKATEDALQAAGIAVAFCPSKATAEVLVQELPL-----------------------------------PSQQQQQPKVLYPASVRAQTTLQDGLTQRGFTVVRLNTYDTVTAHWNEHETVQAAQVQIACFASPSAVKGW---------------------------------------LLNTENNNAV----LAACIGETSAKACRERGWDEEHIFYPEKPGMEGWVNAVAEAAA 287          
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: A0A1Z5JNA0_FISSO (Uroporphyrinogen-III synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JNA0_FISSO)

HSP 1 Score: 194 bits (493), Expect = 1.140e-53
Identity = 132/318 (41.51%), Postives = 155/318 (48.74%), Query Frame = 2
Query:  467 ALTREAGKNEKLAALLAEDGISSVEVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAG---QPPVQVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDALA 1411
            A TRE GKNE+L   +    ++ VE+PCIAH DGPD   L   L      YV ITSPEAA+V  + W+       PP  V +VGKAT DAL   G+T  F PSKA  E L  E+PL                                   P   +P  RVLYPAS RAQ T++ GL  RGF V RLNTYDTV A WNE     AA   +A F SPSAVK W     ++N                                   +EN     + LAACIGETSA+ACRE GW E  IFYP+KPGMEGW  A+ +A A
Sbjct:   50 AATREQGKNEQLMKGIRAIHLNPVELPCIAHADGPDFSSLQETLETNPWDYVTITSPEAARVLSSAWQHCTWQTTPPPAVVAVGKATEDALQASGITVTFCPSKATAEVLVQELPL-----------------------------------PSSQQP--RVLYPASVRAQTTLQDGLTQRGFTVVRLNTYDTVTAQWNEHETNMAAQVQIACFASPSAVKGW-----LLN-----------------------------------TENN---HQVLAACIGETSAKACRERGWNEEHIFYPDKPGMEGWVDAVAEAAA 287          
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: B8BVT8_THAPS (Uroporphyrinogen-III synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVT8_THAPS)

HSP 1 Score: 194 bits (492), Expect = 4.130e-53
Identity = 136/332 (40.96%), Postives = 164/332 (49.40%), Query Frame = 2
Query:  452 SPGEVALTREAGKNEKLA-ALLAEDGISSV-----------EVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQPPV-QVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDAL 1408
            SP  VALTRE GKN+KL  ALL+ + I  +           E+PCI H DGPD   L   L      YV ITSPEAAKV +  W  AG+P + +VA+VGKAT ++L   G+   F PSKA   TL  E+PL                  D     GR                  + YPAS +A  T++ GL+ RGFDV RLNTYDTVPASW+E     A  A VA F SPSAVK W              +   +G  +P R                          A AACIGETSA ACR+  W ES IFYPEKPG++GWA ++ DAL
Sbjct:   63 SPFVVALTREEGKNDKLRKALLSNEHIQQLSQSSGVAVDIHEIPCIEHADGPDTDKLVPTLASTQFDYVAITSPEAAKVLVNAWIEAGRPQLGKVAAVGKATQESLKEFGIEVAFVPSKATAATLVKELPLS-----------------DAATKEGR---------------SSTLFYPASNKAADTLQNGLEERGFDVMRLNTYDTVPASWDEEQTLLAQSANVACFASPSAVKAW--------------LKNTDGMNKPAR--------------------------AKAACIGETSAEACRKNQWDESDIFYPEKPGVDGWAVSVADAL 322          
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: A0A7S2EAC0_TRICV (Uroporphyrinogen-III synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EAC0_TRICV)

HSP 1 Score: 192 bits (487), Expect = 8.320e-52
Identity = 133/329 (40.43%), Postives = 168/329 (51.06%), Query Frame = 2
Query:  464 VALTREAGKNEKLA-ALLAEDGISSV------EVPCIAHQDGPDLPLLPAALTDP----SLSYVVITSPEAAKVFLAGWESAGQPPV-QVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDALAA 1414
            VALTRE GKN KL  ALL+   I         E+PCIAH DGPD  +L  AL+      +  YV +TSPEAA+V  A WE+AG+P + +V +VGKAT +AL R G+   F PSKA  +TL  E+P                 +  D    GR               +  +LYPASA+A+KT+E GL+ RGF V RL+TYDT+PA+W    +  A    VA F SPSA+  W   +    GGR                                      G    AACIGETSA+ CR+ GW E  IFYPEKPG++GWA+A+ DAL A
Sbjct:  115 VALTREDGKNAKLLRALLSHPRIGDAIPVDLEEIPCIAHADGPDSDMLGPALSGKGGFGAFDYVAVTSPEAARVLAAAWEAAGRPDLGEVVAVGKATEEALLREGIRVGFVPSKATAKTLVEELP-----------------ESGDATMEGR---------------LTTLLYPASAKAKKTLEQGLEERGFVVTRLDTYDTIPATWTPEKKNKADLVRVACFASPSAITGWLQNLEDTEGGR-------------------------------------RGNTIAAACIGETSAQMCRDMGWDEGNIFYPEKPGVDGWAEAVADALEA 374          
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: A0A7S2PU27_9STRA (Uroporphyrinogen-III synthase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PU27_9STRA)

HSP 1 Score: 189 bits (479), Expect = 2.770e-51
Identity = 131/329 (39.82%), Postives = 161/329 (48.94%), Query Frame = 2
Query:  464 VALTREAGKNEKL-AALLAEDGISSV------------EVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQPPV-QVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDAL 1408
            +ALTRE GKN KL  AL +   I  +            E+PCIAH DGPD  +L   L+     YV ITSPEAAKVF   W   G+P V  VA+VGKAT +AL   G+   F PSKA   TL  E+P L                 ++    GR                  +LYPASA+AQ T++ GL+ RGF V RLNTYDTV A+W    E+ A    VA F SPSAVK W                               V+   + D            RALAACIGETS  AC++ GW E  IFYPEKPG++GWA+++ +AL
Sbjct:   63 IALTREEGKNGKLNKALQSNSNIKQIISSSSGSAMEVNEIPCIAHADGPDSDILGKTLSSSDFDYVAITSPEAAKVFATAWIDEGRPKVGSVAAVGKATQEALKAYGIDVAFVPSKATAATLVKELPTL-----------------EEATNEGR---------------STSLLYPASAKAQDTLQNGLEERGFIVTRLNTYDTVTATWTPEEESLAKSTTVACFASPSAVKAW-------------------------------VKNTAQLDCP----------RALAACIGETSFAACKKNGWKEEDIFYPEKPGIDGWAESVANAL 318          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS41_ECTSI5.790e-10756.68Uroporphyrinogen-III synthase n=2 Tax=Ectocarpus T... [more]
A0A835YHW0_9STRA3.090e-7047.52Uroporphyrinogen-III synthase n=1 Tax=Tribonema mi... [more]
L1JFY6_GUITC3.750e-5843.49Uroporphyrinogen-III synthase n=2 Tax=Guillardia t... [more]
A0A7S0HHZ2_9CRYP6.460e-5843.17Uroporphyrinogen-III synthase n=1 Tax=Hanusia phi ... [more]
A0A7S4JXA4_9STRA6.050e-5642.25Uroporphyrinogen-III synthase n=3 Tax=Odontella au... [more]
A0A1Z5JYL0_FISSO4.180e-5440.82Uroporphyrinogen-III synthase n=1 Tax=Fistulifera ... [more]
A0A1Z5JNA0_FISSO1.140e-5341.51Uroporphyrinogen-III synthase n=1 Tax=Fistulifera ... [more]
B8BVT8_THAPS4.130e-5340.96Uroporphyrinogen-III synthase n=1 Tax=Thalassiosir... [more]
A0A7S2EAC0_TRICV8.320e-5240.43Uroporphyrinogen-III synthase n=1 Tax=Trieres chin... [more]
A0A7S2PU27_9STRA2.770e-5139.82Uroporphyrinogen-III synthase n=1 Tax=Skeletonema ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2133127..2135919 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score342.0
Seed ortholog evalue4.1e-91
Seed eggNOG ortholog2880.D8LS41
Preferred nameHEMD
KEGG rclassRC01861
KEGG koko:K01719
KEGG ReactionR03165
KEGG Pathwayko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120
KEGG ModuleM00121
GOsGO:0003674,GO:0003824,GO:0004852,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006725,GO:0006778,GO:0006779,GO:0006780,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009507,GO:0009536,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0033013,GO:0033014,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046502,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.uroporphyrinogen III biosynthetic process
EggNOG OGs2QST9@2759,COG1587@1
EC4.2.1.75
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionuroporphyrinogen synthase, putative chloroplast precursor
Ec32 orthologEc-12_004890.1
Exons4
Model size1802
Cds size1347
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1844.1prot_P-fluviatile_contig13.1844.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 2133239..2135576 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815571.141227-UTR-P-fluviatile_contig13:2133126..21332381622815571.141227-UTR-P-fluviatile_contig13:2133126..2133238Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2133127..2133238 +
1693562281.62919-UTR-P-fluviatile_contig13:2133126..21332381693562281.62919-UTR-P-fluviatile_contig13:2133126..2133238Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2133127..2133238 +
1622815571.2062082-UTR-P-fluviatile_contig13:2135576..21359191622815571.2062082-UTR-P-fluviatile_contig13:2135576..2135919Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2135577..2135919 +
1693562281.672174-UTR-P-fluviatile_contig13:2135576..21359191693562281.672174-UTR-P-fluviatile_contig13:2135576..2135919Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2135577..2135919 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815571.151922-CDS-P-fluviatile_contig13:2133238..21333601622815571.151922-CDS-P-fluviatile_contig13:2133238..2133360Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2133239..2133360 +
1693562281.63844-CDS-P-fluviatile_contig13:2133238..21333601693562281.63844-CDS-P-fluviatile_contig13:2133238..2133360Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2133239..2133360 +
1622815571.1680002-CDS-P-fluviatile_contig13:2133553..21337801622815571.1680002-CDS-P-fluviatile_contig13:2133553..2133780Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2133554..2133780 +
1693562281.6483674-CDS-P-fluviatile_contig13:2133553..21337801693562281.6483674-CDS-P-fluviatile_contig13:2133553..2133780Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2133554..2133780 +
1622815571.1841486-CDS-P-fluviatile_contig13:2134166..21342461622815571.1841486-CDS-P-fluviatile_contig13:2134166..2134246Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2134167..2134246 +
1693562281.6569343-CDS-P-fluviatile_contig13:2134166..21342461693562281.6569343-CDS-P-fluviatile_contig13:2134166..2134246Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2134167..2134246 +
1622815571.1945999-CDS-P-fluviatile_contig13:2134658..21355761622815571.1945999-CDS-P-fluviatile_contig13:2134658..2135576Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2134659..2135576 +
1693562281.6647346-CDS-P-fluviatile_contig13:2134658..21355761693562281.6647346-CDS-P-fluviatile_contig13:2134658..2135576Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2134659..2135576 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1844.1

>prot_P-fluviatile_contig13.1844.1 ID=prot_P-fluviatile_contig13.1844.1|Name=mRNA_P-fluviatile_contig13.1844.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=449bp
MGLAQYETHATPINACVRPSHCATRRTPVKYFLPFSFIRLRSTPWAASMF
LAACICVLLAVTPSCGGFHAASASIPHKRYDQQRSHGARCNSLTSGSGGG
SGDSARFSTARACSPGEVALTREAGKNEKLAALLAEDGISSVEVPCIAHQ
DGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQPPVQVASVGK
ATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGD
DEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVR
RLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGA
GVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSA
RACREAGWPESAIFYPEKPGMEGWAKAIRDALAAAKQKVPSAAPPPTA*
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mRNA from alignment at P-fluviatile_contig13:2133127..2135919+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1844.1 ID=mRNA_P-fluviatile_contig13.1844.1|Name=mRNA_P-fluviatile_contig13.1844.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2793bp|location=Sequence derived from alignment at P-fluviatile_contig13:2133127..2135919+ (Porterinema fluviatile SAG_2381)
CCTCTACAACCGCGGTACGGCAATGCGAGGAGCAGAAGAGCGGAACGAGG GGGGCGCGTATGTATCAAGATACAATTGAACCCCTCCGCTCCACACGGAG CATACGAGACCCATGGGGCTCGCTCAGTACGAGACCCACGCCACACCCAT AAATGCTTGCGTGCGCCCGTCACATTGCGCCACGCGCCGCACCCCAGTCA AGTACTTTCTCCCCTTTTCCTTCATCCGCTTGAGGTAAGTGTGGAGGAGA AGCACGGCTTTTGATCGGATGATGAAATCAGGTGACCTTTGGTCAACATG TATCTAGCCCGCTTGAACAGCTGAAAATCAATCTCGATTGCTCGAATCAT GCGCAACACCCTACAACGGAATGCCACAACGGCGGGCAGCGGTGGACTCA TTCGCCCGTACGTTCTCTGTCCAATAGGTCCACACCTTGGGCAGCATCGA TGTTCTTGGCTGCGTGCATTTGCGTTCTTCTTGCCGTGACTCCAAGCTGC GGAGGCTTTCACGCCGCCTCCGCCTCCATCCCGCACAAGCGGTACGACCA GCAGCGCTCTCACGGTGCCCGTTGCAACAGCCTCACCTCCGGCAGCGGCG GCGGCAGCGGGGACTCCGCCAGGTTCAGTACGGCCCGCGCATGTAGTCCT GGAGGTAAATGTCCAAGCGCTGCGATTGGAGAGGGTGGCTGCCGCTGGTA CATTACAAGCACAATAGGGCGATGGAACCAATGAGCCTCTTGCTCTCGTT CACTCTCCTGTCCCGCGCACCTCGCCCCGTCGCGAACCCTGTGTTTAACT TAATGATTGCGCTGCTCCCGTTGGATCGATCGAAACGTTAAAACAGGCCT GCGCAAGTAATGTGCAGCGGGTGTGCATTCGATTTCGCGTGGTGCGATCG CTTGTCTTGCGTCCTGAAAATTTCGCAGCCAGCGCTCACACGTGCTGGCA ACGTGCACACACGTAGGTTCTCGTGCTCTGTTTCTTCCAATTGGTCTAAT GCGTGTGCTCGTTGTTTTTGACCGATCTTGCCGGGAGCAGAGGTGGCTCT GACCAGAGAGGCCGGAAAGAACGAAAAGCTTGCCGCGCTGTTGGCAGAGG ACGGTATTTCCAGTGTTGAGGTGAGGCGGGCTCCGTTTACAACGTTGAGA TCGCACGTCCGGTTTAAGGCTGATTGCCAAAAGCATATCCGCGCTGTGCA GTCAAAGTTGTGATGCCGAAGAGGACGGTGTAGAGAAATTAATATCAAGA GCTCTCAAAATAAGTATCGTTCGACACAGGTTTCCTCTTGCTCGTGGAGC GTTCAAGCTTTGGAAATCGGTCCCTGGGTATGTGGTGGACACTTGCGTAC ATGCAGCAGCCTATGGATGACATCATTGTATACGGCATTGGTATGAACTC ACACGTCCTTCTTACCTCCTTCTGAGAGACTTTTGAGGAGCTCAGAACTT GCAATTGGATTGCATCCTCGGTGTTCGACATCCTTTGTTCTTCCAAAATT AAAAATCGAAACCATGAAATTAAAACGAACAGGTGCCCTGCATCGCGCAC CAGGACGGGCCGGACCTGCCTCTACTGCCGGCAGCCTTGACCGACCCGAG CCTCTCCTACGTCGTGATCACCTCCCCGGAGGCGGCTAAGGTGTTTCTGG CCGGGTGGGAAAGTGCCGGACAACCTCCGGTCCAGGTGGCTAGCGTCGGC AAGGCCACGGGGGACGCACTTAGCAGGGGGGGCGTAACGCCTGTGTTTAC GCCGTCCAAGGCGAACGGCGAGACCCTGGCAGCAGAAATACCTCTCCTTC CGCCGGTCGGCGGCGTGAATAGCAGTGGCGCTGGCGCTGGCGGTGACGGT GATGATGAGATTGCTAGCGGCAGGGGTGGTGGATCTGAGGGGGTCGCGGG GCCGGAGCGCGTAGAACCGATATGTCGCGTCCTCTACCCGGCTTCCGCGA GGGCGCAGAAAACGGTGGAGACCGGGCTACAGGCAAGGGGCTTCGACGTG CGCCGGTTGAACACGTACGACACAGTTCCCGCGAGCTGGAACGAGCGCGT AGAAGCGGCGGCGGCGGGGGCGGCGGTCGCGGCGTTCGGAAGCCCCAGTG CGGTCAAGACGTGGGCGGCCCGGATGGGGGTCGTGAACGGAGGGAGGGGG GCAGGGGTAGCAGCCGCGGAAGGAGCTGGAAGGCCCAGAAGAAAGGCGGA TACCGAGGTGGAGGAGGGCGACCGAGAAGACGCAACAAGTCTTTCCGAAA ACGGGGCAATTGGTTTTAGGGCGCTGGCAGCTTGCATAGGAGAGACGAGC GCGCGGGCATGTCGAGAGGCCGGGTGGCCGGAGTCGGCGATCTTCTACCC GGAGAAGCCGGGGATGGAGGGATGGGCAAAGGCGATCCGTGATGCACTCG CAGCGGCGAAACAAAAAGTCCCCTCGGCTGCGCCTCCCCCGACGGCGTGA CATGCCTCACGTCTACTTACGAAACATATTTGCGCCCATGCGAGAACCAT AGCGACACTTCTTTCGCAGTCCGGCAGGAGCGGGGAAGCATGAGACAGGA AAACGAATCGCTTGGAGCGCAAAAAAGCGGGACTCGTGGCTGTGAGAGTT CAGGAACTCTCGTCGACTTAGATGCCTCTTGAAGAAACCTGCACTTTTGT GTGTGTGCGGGGCTCATCAGCAAGCAGGCGGGCACGGTCCTTTTAGCAGG CGCACAACACATCGGCGAAAAATCGGAACAACCGTCGTTCCACATGTTAG CGATCGTAGCACGGTGCAAATGTCCGATTCCCTCTTGGTCCCC
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:2133127..2135919+

>mRNA_P-fluviatile_contig13.1844.1 ID=mRNA_P-fluviatile_contig13.1844.1|Name=mRNA_P-fluviatile_contig13.1844.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2694bp|location=Sequence derived from alignment at P-fluviatile_contig13:2133127..2135919+ (Porterinema fluviatile SAG_2381)
ATGGGGCTCGCTCAGTACGAGACCCACGCCACACCCATAAATGCTTGCGT
GCGCCCGTCACATTGCGCCACGCGCCGCACCCCAGTCAAGTACTTTCTCC
CCTTTTCCTTCATCCGCTTGAGATGGGGCTCGCTCAGTACGAGACCCACG
CCACACCCATAAATGCTTGCGTGCGCCCGTCACATTGCGCCACGCGCCGC
ACCCCAGTCAAGTACTTTCTCCCCTTTTCCTTCATCCGCTTGAGGTCCAC
ACCTTGGGCAGCATCGATGTTCTTGGCTGCGTGCATTTGCGTTCTTCTTG
CCGTGACTCCAAGCTGCGGAGGCTTTCACGCCGCCTCCGCCTCCATCCCG
CACAAGCGGTACGACCAGCAGCGCTCTCACGGTGCCCGTTGCAACAGCCT
CACCTCCGGCAGCGGCGGCGGCAGCGGGGACTCCGCCAGGTTCAGTACGG
CCCGCGCATGTAGTCCTGGAGGTCCACACCTTGGGCAGCATCGATGTTCT
TGGCTGCGTGCATTTGCGTTCTTCTTGCCGTGACTCCAAGCTGCGGAGGC
TTTCACGCCGCCTCCGCCTCCATCCCGCACAAGCGGTACGACCAGCAGCG
CTCTCACGGTGCCCGTTGCAACAGCCTCACCTCCGGCAGCGGCGGCGGCA
GCGGGGACTCCGCCAGGTTCAGTACGGCCCGCGCATGTAGTCCTGGAGAG
GTGGCTCTGACCAGAGAGGCCGGAAAGAACGAAAAGCTTGCCGCGCTGTT
GGCAGAGGACGGTATTTCCAGTGTTGAGAGGTGGCTCTGACCAGAGAGGC
CGGAAAGAACGAAAAGCTTGCCGCGCTGTTGGCAGAGGACGGTATTTCCA
GTGTTGAGGTGCCCTGCATCGCGCACCAGGACGGGCCGGACCTGCCTCTA
CTGCCGGCAGCCTTGACCGACCCGAGCCTCTCCTACGTCGTGATCACCTC
CCCGGAGGCGGCTAAGGTGTTTCTGGCCGGGTGGGAAAGTGCCGGACAAC
CTCCGGTCCAGGTGGCTAGCGTCGGCAAGGCCACGGGGGACGCACTTAGC
AGGGGGGGCGTAACGCCTGTGTTTACGCCGTCCAAGGCGAACGGCGAGAC
CCTGGCAGCAGAAATACCTCTCCTTCCGCCGGTCGGCGGCGTGAATAGCA
GTGGCGCTGGCGCTGGCGGTGACGGTGATGATGAGATTGCTAGCGGCAGG
GGTGGTGGATCTGAGGGGGTCGCGGGGCCGGAGCGCGTAGAACCGATATG
TCGCGTCCTCTACCCGGCTTCCGCGAGGGCGCAGAAAACGGTGGAGACCG
GGCTACAGGCAAGGGGCTTCGACGTGCGCCGGTTGAACACGTACGACACA
GTTCCCGCGAGCTGGAACGAGCGCGTAGAAGCGGCGGCGGCGGGGGCGGC
GGTCGCGGCGTTCGGAAGCCCCAGTGCGGTCAAGACGTGGGCGGCCCGGA
TGGGGGTCGTGAACGGAGGGAGGGGGGCAGGGGTAGCAGCCGCGGAAGGA
GCTGGAAGGCCCAGAAGAAAGGCGGATACCGAGGTGGAGGAGGGCGACCG
AGAAGACGCAACAAGTCTTTCCGAAAACGGGGCAATTGGTTTTAGGGCGC
TGGCAGCTTGCATAGGAGAGACGAGCGCGCGGGCATGTCGAGAGGCCGGG
TGGCCGGAGTCGGCGATCTTCTACCCGGAGAAGCCGGGGATGGAGGGATG
GGCAAAGGCGATCCGTGATGCACTCGCAGCGGCGAAACAAAAAGTCCCCT
CGGCTGCGCCTCCCCCGACGGCGTGAGTGCCCTGCATCGCGCACCAGGAC
GGGCCGGACCTGCCTCTACTGCCGGCAGCCTTGACCGACCCGAGCCTCTC
CTACGTCGTGATCACCTCCCCGGAGGCGGCTAAGGTGTTTCTGGCCGGGT
GGGAAAGTGCCGGACAACCTCCGGTCCAGGTGGCTAGCGTCGGCAAGGCC
ACGGGGGACGCACTTAGCAGGGGGGGCGTAACGCCTGTGTTTACGCCGTC
CAAGGCGAACGGCGAGACCCTGGCAGCAGAAATACCTCTCCTTCCGCCGG
TCGGCGGCGTGAATAGCAGTGGCGCTGGCGCTGGCGGTGACGGTGATGAT
GAGATTGCTAGCGGCAGGGGTGGTGGATCTGAGGGGGTCGCGGGGCCGGA
GCGCGTAGAACCGATATGTCGCGTCCTCTACCCGGCTTCCGCGAGGGCGC
AGAAAACGGTGGAGACCGGGCTACAGGCAAGGGGCTTCGACGTGCGCCGG
TTGAACACGTACGACACAGTTCCCGCGAGCTGGAACGAGCGCGTAGAAGC
GGCGGCGGCGGGGGCGGCGGTCGCGGCGTTCGGAAGCCCCAGTGCGGTCA
AGACGTGGGCGGCCCGGATGGGGGTCGTGAACGGAGGGAGGGGGGCAGGG
GTAGCAGCCGCGGAAGGAGCTGGAAGGCCCAGAAGAAAGGCGGATACCGA
GGTGGAGGAGGGCGACCGAGAAGACGCAACAAGTCTTTCCGAAAACGGGG
CAATTGGTTTTAGGGCGCTGGCAGCTTGCATAGGAGAGACGAGCGCGCGG
GCATGTCGAGAGGCCGGGTGGCCGGAGTCGGCGATCTTCTACCCGGAGAA
GCCGGGGATGGAGGGATGGGCAAAGGCGATCCGTGATGCACTCGCAGCGG
CGAAACAAAAAGTCCCCTCGGCTGCGCCTCCCCCGACGGCGTGA
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