mRNA_P-fluviatile_contig13.1844.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: D8LS41_ECTSI (Uroporphyrinogen-III synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS41_ECTSI) HSP 1 Score: 336 bits (861), Expect = 5.790e-107 Identity = 225/397 (56.68%), Postives = 249/397 (62.72%), Query Frame = 2
Query: 242 PWAASMFLAACICVLLAVTPSCGGFHAASASIPHKRYDQQRSHGARCNSLTSGSGGGSGDSARFSTARACSP--GEVALTREAGKNEKLAALLAEDGISSVEVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQP--PVQVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLP--PVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDALAA 1414
P ++ L A C+ LAV+ + S I H+++ + +S G G G AR STAR C+ EVALTREAGKN KLA LL + GISSVEVPCIAHQDGPDLPLLPAAL DP L+YVV+TSPEAAKVFLAGW AG P PV VA VGKATGDAL GGV+PVFTPSKA GETLAAEIPL P P GP RVLYPASA+AQ T+E+GL+ARGF+VRRLNTYDTVPA+W+E EAAAAGA+VAAFGSPSAVKTWAARMGVV AGV ALAACIGETSARACREAGW ESAIFYPEKPGMEGWAKA+ ALAA
Sbjct: 7 PSTTAVALVAAACLPLAVSFN-------SIRIAHEQHQRHFGRSPEWHSGIIGRGETVGH-ARPSTARGCASRGAEVALTREAGKNGKLAKLLTDAGISSVEVPCIAHQDGPDLPLLPAALADPGLAYVVVTSPEAAKVFLAGWAKAGVPGVPVPVACVGKATGDALRAGGVSPVFTPSKATGETLAAEIPLPPSAPADDTXXXXXXXXXXXXXXXXXXXXXXXXXXXGP-------RVLYPASAKAQNTLESGLRARGFEVRRLNTYDTVPATWDESAEAAAAGASVAAFGSPSAVKTWAARMGVV----AAGVX--------------------XXXXXXXXXXXXXXXGALAACIGETSARACREAGWAESAIFYPEKPGMEGWAKAVGQALAA 364
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: A0A835YHW0_9STRA (Uroporphyrinogen-III synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHW0_9STRA) HSP 1 Score: 237 bits (605), Expect = 3.090e-70 Identity = 153/322 (47.52%), Postives = 177/322 (54.97%), Query Frame = 2
Query: 464 VALTREAGKNEKLAALLAEDGISSVEVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQPPVQVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDALAAAKQKV 1429
VALTREAG N KL ALL GI+ VEVPCIA DGPD LP L + YV++TSPE+AKVFL W++A +P V VA VG ATGDAL G+ P FTPS+A GE LAAEIPL PP V GA RVLYPAS RA TV+ GL+ARGF V RLNTYDT A+W++ + AA AAVAAFGSPSAVK W + MGV A AACIG TSA+A + AGW + IF+PEKPGM GWA+A+ +ALA QKV
Sbjct: 36 VALTREAGNNGKLEALLVAKGINCVEVPCIAFTDGPDSAQLPQHLASGAYDYVIVTSPESAKVFLQAWDAAERPNVSVACVGTATGDALRARGLEPAFTPSRAYGEDLAAEIPL-PPSAAVGEGGA------------------------------PRVLYPASTRAPGTVQEGLEARGFHVVRLNTYDTGAAAWSDADLSNAARAAVAAFGSPSAVKAWVSHMGVE--------------------------------------------AAAAACIGVTSAKAAKAAGWADDRIFWPEKPGMPGWAQAVEEALAGVPQKV 282
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: L1JFY6_GUITC (Uroporphyrinogen-III synthase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JFY6_GUITC) HSP 1 Score: 205 bits (521), Expect = 3.750e-58 Identity = 137/315 (43.49%), Postives = 165/315 (52.38%), Query Frame = 2
Query: 464 VALTREAGKNEKLAALLAEDGISSVEVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQPPVQVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDAL 1408
VALTRE GKN KL L+E G+ +VE+PCIA + G D LP+AL + YVV+TSPEAA VFL W A QP +QVA VG T AL GG+ PVF PSKA G+TLA E+P G +G RVLYPASA+A+ V+ GL ARGF V RLNTYDTV A+W+E+ AA AAV A SPSAVKTWA R+G + AACIGETSA AC+E G+ +F+PE PG+ GWA+A+ DAL
Sbjct: 24 VALTRELGKNLKLEKALSEKGVRTVELPCIAFEAGIDSDSLPSALKE-DWEYVVVTSPEAASVFLDAWRLASQPSLQVACVGTGTKQALQEGGIEPVFMPSKATGKTLADELP------GPQGNG--------------------------------RVLYPASAKARTEVQGGLTARGFTVTRLNTYDTVSATWSEQELQMAASAAVVALASPSAVKTWAERLGT---------------------------------------------KQYAACIGETSASACKELGFEH--VFWPESPGIPGWAQAVHDAL 252
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: A0A7S0HHZ2_9CRYP (Uroporphyrinogen-III synthase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HHZ2_9CRYP) HSP 1 Score: 206 bits (525), Expect = 6.460e-58 Identity = 136/315 (43.17%), Postives = 164/315 (52.06%), Query Frame = 2
Query: 464 VALTREAGKNEKLAALLAEDGISSVEVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQPPVQVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDAL 1408
VALTRE GKN KL +L+E GI +VE+PCIA + G D LP AL + YVV+TSPEAA VFL W AG+P + VA VG T AL GG+ PVF PSKA G+TLA E+P GP R RVLYPASA+A+ V+ GL ARGF V RLNTYDTV A+W+++ A AAV A SPSAVKTWA R+G + AACIGETSA AC+E G+ +F+PE PG+ GWA+A+ DAL
Sbjct: 88 VALTRELGKNSKLEKVLSEKGIRTVELPCIAFEAGTDAETLPKALQE-EWEYVVVTSPEAASVFLDAWREAGEPSLPVACVGAGTKQALQEGGIEPVFMPSKATGKTLADELP-----------------------------------GPRRSG---RVLYPASAKARTEVQGGLTARGFSVTRLNTYDTVSATWSDKELQMGASAAVIALASPSAVKTWAERLGT---------------------------------------------KQYAACIGETSAAACKELGFEH--VFWPESPGILGWAQAVHDAL 316
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: A0A7S4JXA4_9STRA (Uroporphyrinogen-III synthase n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JXA4_9STRA) HSP 1 Score: 201 bits (511), Expect = 6.050e-56 Identity = 139/329 (42.25%), Postives = 170/329 (51.67%), Query Frame = 2
Query: 464 VALTREAGKNEKLA-ALLAEDGISSV------EVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQPPV-QVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDALAAAKQK 1426
VALTRE GKN KL ALL+ I E+PCI H DG D L L + S YV +TSPEAA+V + WE AG+P + ++A+VGKATG+AL G+ F PSKA +TL E+P DD A GR +LYPASA+A+ T++ GL+ RGFDV RL+TYDTVPASW+E A A VA F SPSAV W +G G G G + GD AACIGETSA+ CR+ GW E I+YPEKPG+EGWA A+ DAL A +K
Sbjct: 62 VALTREDGKNSKLLRALLSHPRIGDAIPVDIEEIPCIEHADGDDYDRLGPTLKERSFDYVAVTSPEAARVLASAWEGAGRPSMGKIAAVGKATGEALIALGIEVDFVPSKATAKTLVEELPPS-----------------DDATAEGR---------------PTTLLYPASAKARPTLQNGLEGRGFDVTRLDTYDTVPASWSEDRTDLAREAGVACFASPSAVNAWVENLG----GEGEGCS------------------GD----------------VAAACIGETSAQGCRDMGWDEGDIYYPEKPGVEGWANAVADALEAIAEK 320
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: A0A1Z5JYL0_FISSO (Uroporphyrinogen-III synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYL0_FISSO) HSP 1 Score: 195 bits (496), Expect = 4.180e-54 Identity = 129/316 (40.82%), Postives = 151/316 (47.78%), Query Frame = 2
Query: 467 ALTREAGKNEKLAALLAEDGISSVEVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQP-PVQVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDALA 1411
A TRE GKNE+L + + VE+PCIAH DGPD L L + YV ITSPEAA+V + W+ P P V +VGKAT DAL G+ F PSKA E L E+PL P + + +VLYPAS RAQ T++ GL RGF V RLNTYDTV A WNE AA +A F SPSAVK W + N A+ LAACIGETSA+ACRE GW E IFYPEKPGMEGW A+ +A A
Sbjct: 50 AATREQGKNEQLMKGIRGIHLHPVELPCIAHADGPDFSSLQETLQNNHWDYVTITSPEAARVLSSAWQHCTWPTPPAVVAVGKATEDALQAAGIAVAFCPSKATAEVLVQELPL-----------------------------------PSQQQQQPKVLYPASVRAQTTLQDGLTQRGFTVVRLNTYDTVTAHWNEHETVQAAQVQIACFASPSAVKGW---------------------------------------LLNTENNNAV----LAACIGETSAKACRERGWDEEHIFYPEKPGMEGWVNAVAEAAA 287
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: A0A1Z5JNA0_FISSO (Uroporphyrinogen-III synthase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JNA0_FISSO) HSP 1 Score: 194 bits (493), Expect = 1.140e-53 Identity = 132/318 (41.51%), Postives = 155/318 (48.74%), Query Frame = 2
Query: 467 ALTREAGKNEKLAALLAEDGISSVEVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAG---QPPVQVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDALA 1411
A TRE GKNE+L + ++ VE+PCIAH DGPD L L YV ITSPEAA+V + W+ PP V +VGKAT DAL G+T F PSKA E L E+PL P +P RVLYPAS RAQ T++ GL RGF V RLNTYDTV A WNE AA +A F SPSAVK W ++N +EN + LAACIGETSA+ACRE GW E IFYP+KPGMEGW A+ +A A
Sbjct: 50 AATREQGKNEQLMKGIRAIHLNPVELPCIAHADGPDFSSLQETLETNPWDYVTITSPEAARVLSSAWQHCTWQTTPPPAVVAVGKATEDALQASGITVTFCPSKATAEVLVQELPL-----------------------------------PSSQQP--RVLYPASVRAQTTLQDGLTQRGFTVVRLNTYDTVTAQWNEHETNMAAQVQIACFASPSAVKGW-----LLN-----------------------------------TENN---HQVLAACIGETSAKACRERGWNEEHIFYPDKPGMEGWVDAVAEAAA 287
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: B8BVT8_THAPS (Uroporphyrinogen-III synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVT8_THAPS) HSP 1 Score: 194 bits (492), Expect = 4.130e-53 Identity = 136/332 (40.96%), Postives = 164/332 (49.40%), Query Frame = 2
Query: 452 SPGEVALTREAGKNEKLA-ALLAEDGISSV-----------EVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQPPV-QVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDAL 1408
SP VALTRE GKN+KL ALL+ + I + E+PCI H DGPD L L YV ITSPEAAKV + W AG+P + +VA+VGKAT ++L G+ F PSKA TL E+PL D GR + YPAS +A T++ GL+ RGFDV RLNTYDTVPASW+E A A VA F SPSAVK W + +G +P R A AACIGETSA ACR+ W ES IFYPEKPG++GWA ++ DAL
Sbjct: 63 SPFVVALTREEGKNDKLRKALLSNEHIQQLSQSSGVAVDIHEIPCIEHADGPDTDKLVPTLASTQFDYVAITSPEAAKVLVNAWIEAGRPQLGKVAAVGKATQESLKEFGIEVAFVPSKATAATLVKELPLS-----------------DAATKEGR---------------SSTLFYPASNKAADTLQNGLEERGFDVMRLNTYDTVPASWDEEQTLLAQSANVACFASPSAVKAW--------------LKNTDGMNKPAR--------------------------AKAACIGETSAEACRKNQWDESDIFYPEKPGVDGWAVSVADAL 322
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: A0A7S2EAC0_TRICV (Uroporphyrinogen-III synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EAC0_TRICV) HSP 1 Score: 192 bits (487), Expect = 8.320e-52 Identity = 133/329 (40.43%), Postives = 168/329 (51.06%), Query Frame = 2
Query: 464 VALTREAGKNEKLA-ALLAEDGISSV------EVPCIAHQDGPDLPLLPAALTDP----SLSYVVITSPEAAKVFLAGWESAGQPPV-QVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDALAA 1414
VALTRE GKN KL ALL+ I E+PCIAH DGPD +L AL+ + YV +TSPEAA+V A WE+AG+P + +V +VGKAT +AL R G+ F PSKA +TL E+P + D GR + +LYPASA+A+KT+E GL+ RGF V RL+TYDT+PA+W + A VA F SPSA+ W + GGR G AACIGETSA+ CR+ GW E IFYPEKPG++GWA+A+ DAL A
Sbjct: 115 VALTREDGKNAKLLRALLSHPRIGDAIPVDLEEIPCIAHADGPDSDMLGPALSGKGGFGAFDYVAVTSPEAARVLAAAWEAAGRPDLGEVVAVGKATEEALLREGIRVGFVPSKATAKTLVEELP-----------------ESGDATMEGR---------------LTTLLYPASAKAKKTLEQGLEERGFVVTRLDTYDTIPATWTPEKKNKADLVRVACFASPSAITGWLQNLEDTEGGR-------------------------------------RGNTIAAACIGETSAQMCRDMGWDEGNIFYPEKPGVDGWAEAVADALEA 374
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Match: A0A7S2PU27_9STRA (Uroporphyrinogen-III synthase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PU27_9STRA) HSP 1 Score: 189 bits (479), Expect = 2.770e-51 Identity = 131/329 (39.82%), Postives = 161/329 (48.94%), Query Frame = 2
Query: 464 VALTREAGKNEKL-AALLAEDGISSV------------EVPCIAHQDGPDLPLLPAALTDPSLSYVVITSPEAAKVFLAGWESAGQPPV-QVASVGKATGDALSRGGVTPVFTPSKANGETLAAEIPLLPPVGGVNSSGAGAGGDGDDEIASGRGGGSEGVAGPERVEPICRVLYPASARAQKTVETGLQARGFDVRRLNTYDTVPASWNERVEAAAAGAAVAAFGSPSAVKTWAARMGVVNGGRGAGVAAAEGAGRPRRKADTEVEEGDREDATSLSENGAIGFRALAACIGETSARACREAGWPESAIFYPEKPGMEGWAKAIRDAL 1408
+ALTRE GKN KL AL + I + E+PCIAH DGPD +L L+ YV ITSPEAAKVF W G+P V VA+VGKAT +AL G+ F PSKA TL E+P L ++ GR +LYPASA+AQ T++ GL+ RGF V RLNTYDTV A+W E+ A VA F SPSAVK W V+ + D RALAACIGETS AC++ GW E IFYPEKPG++GWA+++ +AL
Sbjct: 63 IALTREEGKNGKLNKALQSNSNIKQIISSSSGSAMEVNEIPCIAHADGPDSDILGKTLSSSDFDYVAITSPEAAKVFATAWIDEGRPKVGSVAAVGKATQEALKAYGIDVAFVPSKATAATLVKELPTL-----------------EEATNEGR---------------STSLLYPASAKAQDTLQNGLEERGFIVTRLNTYDTVTATWTPEEESLAKSTTVACFASPSAVKAW-------------------------------VKNTAQLDCP----------RALAACIGETSFAACKKNGWKEEDIFYPEKPGIDGWAESVANAL 318 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1844.1 >prot_P-fluviatile_contig13.1844.1 ID=prot_P-fluviatile_contig13.1844.1|Name=mRNA_P-fluviatile_contig13.1844.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=449bp MGLAQYETHATPINACVRPSHCATRRTPVKYFLPFSFIRLRSTPWAASMFback to top mRNA from alignment at P-fluviatile_contig13:2133127..2135919+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1844.1 ID=mRNA_P-fluviatile_contig13.1844.1|Name=mRNA_P-fluviatile_contig13.1844.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2793bp|location=Sequence derived from alignment at P-fluviatile_contig13:2133127..2135919+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:2133127..2135919+ >mRNA_P-fluviatile_contig13.1844.1 ID=mRNA_P-fluviatile_contig13.1844.1|Name=mRNA_P-fluviatile_contig13.1844.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2694bp|location=Sequence derived from alignment at P-fluviatile_contig13:2133127..2135919+ (Porterinema fluviatile SAG_2381)back to top |