mRNA_P-fluviatile_contig13.1843.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1843.1
Unique NamemRNA_P-fluviatile_contig13.1843.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig13.1843.1 vs. uniprot
Match: D8LS42_ECTSI (Mitochondrial inner membrane protease subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS42_ECTSI)

HSP 1 Score: 386 bits (991), Expect = 3.900e-129
Identity = 210/276 (76.09%), Postives = 219/276 (79.35%), Query Frame = 2 
Query:   86 STARAAVILLGLLSRVLSCEAF--VSGRTSI-STA-TSGVHPVHSSRGDAPLRKVTARPPSRAVCFPPRASPTLRSIGGDG-QGGDGGDGLFRGLKQWWERDGKSDLKIYGTSLLLALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFSEFSDRGKNDALIKRVIAVGGDTVQIKDGSLFVNGQEQFEDYTFEEPEYKWGPQIVPEGMVMVLGDNRNHSLDSHVWGFLPTENVIGRAIFKYWPPWRVGAIET 898
            S ARA   LL L S V    AF  +SGRT+  STA TSG    H+  G    R +     S  V  PPR    LRS  GDG QG     G+F G+++WWERDGKSDLKIYGTSL LALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKF EFSDRGK DALIKRVIAVGGD VQIKDGSLFVNGQEQFEDYTFEEPEY WGPQ VPEGMVMVLGDNRNHSLDSH+WGFLPTENVIGRAIFKYWPPWR G IET
Sbjct:   14 SGARALAGLLVLSSLVQLSRAFGGISGRTTATSTARTSGWRQHHAHGGGVRHRSL-----SPIVGLPPRVPHGLRSEAGDGGQGXXXXXGIFGGIQEWWERDGKSDLKIYGTSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFREFSDRGKKDALIKRVIAVGGDAVQIKDGSLFVNGQEQFEDYTFEEPEYSWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRAGTIET 284
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BLAST of mRNA_P-fluviatile_contig13.1843.1 vs. uniprot
Match: A0A6H5KUG3_9PHAE (Mitochondrial inner membrane protease subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUG3_9PHAE)

HSP 1 Score: 377 bits (967), Expect = 1.260e-126
Identity = 184/211 (87.20%), Postives = 189/211 (89.57%), Query Frame = 2 
Query:  269 FPPRASPTLRSIGGDG-QGGDGGDGLFRGLKQWWERDGKSDLKIYGTSLLLALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFSEFSDRGKNDALIKRVIAVGGDTVQIKDGSLFVNGQEQFEDYTFEEPEYKWGPQIVPEGMVMVLGDNRNHSLDSHVWGFLPTENVIGRAIFKYWPPWRVGAIET 898
             PPR    LRS  GDG QG     G+F G+++WWERDGKSDLKIYGTSL LALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKF EFSDRGK DALIKRVIAVGGD VQIKDGSLFVNGQEQFEDYTFEEPEY WGPQ VPEGMVMVLGDNRNHSLDSH+WGFLPTENVIGRAIFKYWPPWR G IET
Sbjct:    1 MPPRVPHGLRSEAGDGGQGXXXXXGIFGGIQEWWERDGKSDLKIYGTSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFREFSDRGKKDALIKRVIAVGGDVVQIKDGSLFVNGQEQFEDYTFEEPEYSWGPQTVPEGMVMVLGDNRNHSLDSHIWGFLPTENVIGRAIFKYWPPWRAGTIET 211
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BLAST of mRNA_P-fluviatile_contig13.1843.1 vs. uniprot
Match: A0A6T5N089_HETAK (Mitochondrial inner membrane protease subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5N089_HETAK)

HSP 1 Score: 259 bits (662), Expect = 8.280e-80
Identity = 127/183 (69.40%), Postives = 153/183 (83.61%), Query Frame = 2 
Query:  350 GLKQWWE-RDGKSDLKIYGTSLLLALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFSEFSDRGKNDALIKRVIAVGGDTVQIKDGS-LFVNGQEQFEDYTFEEPEYKWGPQIVPEGMVMVLGDNRNHSLDSHVWGFLPTENVIGRAIFKYWPPWRVGAI 892
            GL  W +  +GK DL+IYGTSL +ALV+R+  +EPR+IPSLSM+PTF+IGDQLAVDKLS K++RPYQR+DVVVF PP  FS FSDR + +ALIKRV+AV GD V+IKDG  LF+NG++Q E YT E+  Y+WGPQ VP+G V+VLGDNRNHSLD HVWGFLPTEN+IGRA+FKYWPPWR G I
Sbjct:   88 GLINWAQSEEGKEDLRIYGTSLAVALVLRTFVVEPRWIPSLSMYPTFDIGDQLAVDKLS-KVARPYQRRDVVVFTPPDAFSIFSDR-RGEALIKRVVAVAGDVVEIKDGGHLFINGEKQEEKYTNEDALYEWGPQTVPKGCVLVLGDNRNHSLDGHVWGFLPTENIIGRAVFKYWPPWRAGGI 268
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BLAST of mRNA_P-fluviatile_contig13.1843.1 vs. uniprot
Match: A0A836CAW9_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAW9_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.580e-71
Identity = 105/151 (69.54%), Postives = 128/151 (84.77%), Query Frame = 2 
Query:  443 LEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFSEFSDRGKNDALIKRVIAVGGDTVQIKDGSLFVNGQEQFEDYTFEEPEYKWGPQIVPEGMVMVLGDNRNHSLDSHVWGFLPTENVIGRAIFKYWPPWRVGAIE 895
            +EPR+IPSLSMFPTFE+GDQLAV+K++ +  RPY R DVVVFYPP  FS FS RG ++ALIKR++AV GDTVQI+ G +++NGQ Q E +  ++PEY+WGP +VP G VMVLGDNRNHSLDSH+WGFLP ENVIGRA+FKYWPPWR GA+E
Sbjct:    1 MEPRYIPSLSMFPTFEVGDQLAVEKVT-RYYRPYSRHDVVVFYPPEAFSLFSARGTDEALIKRIVAVEGDTVQIRGGKVYLNGQAQDEPFVTDKPEYEWGPMVVPAGKVMVLGDNRNHSLDSHIWGFLPRENVIGRAVFKYWPPWRAGAVE 150
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BLAST of mRNA_P-fluviatile_contig13.1843.1 vs. uniprot
Match: A0A7S2S8J5_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8J5_9STRA)

HSP 1 Score: 235 bits (599), Expect = 1.750e-70
Identity = 119/191 (62.30%), Postives = 147/191 (76.96%), Query Frame = 2 
Query:  335 DGLFRGLKQWW-ERDGKSDLKIYGTSLLLALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFSEFSDRG-KNDALIKRVIAVGGDTVQIKDG-SLFVNGQEQFEDYTFEEPEYKWGPQIVPEGMVMVLGDNRNHSLDSHVWGFLPTENVIGRAIFKYWPPWRVGAIET 898
            D L    ++WW + D ++++K Y  SL LAL+ R+  +EPRFIPSLSMFPTF++GDQLAVDK+S K+ RPY+R DVVVF PP  F +    G K +ALIKRV+AV GD V++KDG +L+VNG  Q E +T E+  Y WGP+ VP GM+MVLGDNRNHSLDSHVWGFLP ENVIGRA+FKYWP WR+G IET
Sbjct:   72 DSLQAKAQRWWADEDLRAEVKSYTVSLGLALLFRAFIVEPRFIPSLSMFPTFDVGDQLAVDKIS-KVVRPYERNDVVVFTPPQAFFDVMGSGTKKEALIKRVVAVAGDVVEMKDGGTLYVNGVPQPEGFTNEKAFYDWGPREVPAGMLMVLGDNRNHSLDSHVWGFLPKENVIGRAVFKYWPVWRLGLIET 261
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BLAST of mRNA_P-fluviatile_contig13.1843.1 vs. uniprot
Match: A0A7R9WYP6_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WYP6_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.970e-68
Identity = 110/195 (56.41%), Postives = 150/195 (76.92%), Query Frame = 2 
Query:  326 DGGDGLFRGLKQWWERD-GKSDLKIYGTSLLLALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFSEF--SDRGKN-----DALIKRVIAVGGDTVQIKDGSLFVNGQEQFEDYTFEEPEYKWGPQIVPEGMVMVLGDNRNHSLDSHVWGFLPTENVIGRAIFKYWPPWRVG 886
            +G DG+  G+++W + D GK D+K Y TSL LAL++R   +EPRFIPSLSM+PTF++GDQLAV+K++ ++ +P  R++VVVF PP  F E   +D G++     +ALIKR++A+ GD V++K G L++NG  Q E YT E+ EY++GP +VPEG V+VLGDNRNHSLD H+WGFLP ENVIGRA+F YWPPWR+G
Sbjct:  110 NGEDGILSGIQRWLKSDEGKEDIKTYFTSLALALLLRFTIIEPRFIPSLSMYPTFDVGDQLAVEKVTKRI-KPLYRREVVVFNPPATFREVIVNDYGQDPKRAKEALIKRIVAIEGDQVEVKKGKLYINGDLQNEPYTAEDAEYEFGPVVVPEGAVLVLGDNRNHSLDGHIWGFLPQENVIGRAVFVYWPPWRLG 303
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BLAST of mRNA_P-fluviatile_contig13.1843.1 vs. uniprot
Match: B8BZJ0_THAPS (Mitochondrial inner membrane protease subunit (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZJ0_THAPS)

HSP 1 Score: 224 bits (572), Expect = 1.270e-67
Identity = 107/181 (59.12%), Postives = 139/181 (76.80%), Query Frame = 2 
Query:  359 QWWERD-GKSDLKIYGTSLLLALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFSEF---SDRGKNDALIKRVIAVGGDTVQIKDGSLFVNGQEQFEDYTFEEPEYKWGPQIVPEGMVMVLGDNRNHSLDSHVWGFLPTENVIGRAIFKYWPPWRVGA 889
            +W+  D GK D+K Y  SL +AL++R + +EPR+IPSLSMFPTFE+GDQLAV+K++ ++ RP+ R +VVVF+PP KF E    + R   +ALIKR++A  GD V++  G LFVNG EQ E +T E+ EY +GP +VP G V+VLGDNRNHSLD H+WGFLPTENVIGRA+F YWPPWR G+
Sbjct:    1 EWFASDEGKEDVKTYTVSLGVALLLRLLIIEPRYIPSLSMFPTFEVGDQLAVEKVTKRI-RPFSRNEVVVFHPPMKFREIVGDTSRKAKEALIKRIVATEGDKVEVMGGKLFVNGVEQEEPFTAEDAEYDFGPVVVPPGNVLVLGDNRNHSLDGHIWGFLPTENVIGRAVFVYWPPWRCGS 180
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BLAST of mRNA_P-fluviatile_contig13.1843.1 vs. uniprot
Match: A0A6V1AJW1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V1AJW1_9STRA)

HSP 1 Score: 228 bits (580), Expect = 2.170e-67
Identity = 110/187 (58.82%), Postives = 144/187 (77.01%), Query Frame = 2 
Query:  341 LFRGLKQWWERD-GKSDLKIYGTSLLLALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFSEF---SDRGKNDALIKRVIAVGGDTVQIK-DGSLFVNGQEQFEDYTFEEPEYKWGPQIVPEGMVMVLGDNRNHSLDSHVWGFLPTENVIGRAIFKYWPPWRVG 886
             F  +++W+  D GK D+K Y  SL +AL++R + +EPR+IPSLSM+PTFE+GDQLAV+K++ ++ RP+ R +VVVF PP +F E    S R   +ALIKR++AV GDTV++K  G LFVNG +Q E +T E+ EY++GP IVP G V+VLGDNRNHSLD H+WGFLP ENVIGRA+F YWPPWRVG
Sbjct:   96 FFEQIQEWFASDEGKEDVKTYTVSLSVALLLRLLIIEPRYIPSLSMYPTFEVGDQLAVEKVTKRI-RPFNRNEVVVFNPPERFRELVGESSRKSKEALIKRIVAVEGDTVEVKMGGKLFVNGVQQDEPFTAEDAEYEFGPVIVPPGDVLVLGDNRNHSLDGHIWGFLPAENVIGRAVFVYWPPWRVG 281
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BLAST of mRNA_P-fluviatile_contig13.1843.1 vs. uniprot
Match: K0S0N9_THAOC (Mitochondrial inner membrane protease subunit n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S0N9_THAOC)

HSP 1 Score: 223 bits (567), Expect = 1.830e-65
Identity = 104/186 (55.91%), Postives = 141/186 (75.81%), Query Frame = 2 
Query:  341 LFRGLKQWW-ERDGKSDLKIYGTSLLLALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFSEF---SDRGKNDALIKRVIAVGGDTVQIKDGSLFVNGQEQFEDYTFEEPEYKWGPQIVPEGMVMVLGDNRNHSLDSHVWGFLPTENVIGRAIFKYWPPWRVG 886
             F  +++W+   +GK D++ Y TSL +AL++R + +EPR+IPSLSM+PTFE+GDQLAV+K++ ++ RP  R +VVVF PP  F E    + R   +ALIKR++A  GD V++  G LFVNG+EQ E +T E+ +Y++GP +VP G V+VLGDNRNHSLD H+WGFLP ENVIGRA+F YWPPWRVG
Sbjct:   97 FFEQVQEWFASEEGKEDVRTYTTSLGIALLLRLLIIEPRYIPSLSMYPTFEVGDQLAVEKVTKRI-RPLNRNEVVVFNPPTSFKEIVGDTSRKAKEALIKRIVATEGDKVEVMGGKLFVNGKEQDEPFTAEDAQYEFGPVLVPAGEVLVLGDNRNHSLDGHIWGFLPAENVIGRAVFVYWPPWRVG 281
[Close]
BLAST of mRNA_P-fluviatile_contig13.1843.1 vs. uniprot
Match: A0A7J7IBZ0_9RHOD (Mitochondrial inner membrane protease subunit n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IBZ0_9RHOD)

HSP 1 Score: 220 bits (561), Expect = 4.080e-65
Identity = 107/200 (53.50%), Postives = 138/200 (69.00%), Query Frame = 2 
Query:  356 KQWWER----DGKSDLKIYGTSLLLALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFSEFSDR----------------GKNDALIKRVIAVGGDTVQIKDGSLFVNGQEQFEDYTFEEPEYKWGPQIVPEGMVMVLGDNRNHSLDSHVWGFLPTENVIGRAIFKYWPPWRVGAIE 895
            ++WW R    +  SD++++  S   A+++R   +EPR+IPSLSMFPTFEIGDQL VDK + KL R  +R DVVVFYPPP   E S                  G  DA+IKRV+AV GDTV ++DG L+VNG+ Q E Y  E+P+Y+WGP  VPEG ++VLGDNR++SLDSH+WGFLP  NVIGRA+F+YWP  R+G IE
Sbjct:   46 RRWWHRLLYDEQFSDVRVFTASFAAAVLLRVFVIEPRYIPSLSMFPTFEIGDQLFVDKATQKLGRHIERGDVVVFYPPPALIEASKMTAQALNAAGEKDVHQYGAKDAMIKRVVAVAGDTVAVRDGRLYVNGEAQIEPYVTEQPDYRWGPVQVPEGCLVVLGDNRSNSLDSHIWGFLPERNVIGRAVFRYWPITRMGLIE 245
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1843.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS42_ECTSI3.900e-12976.09Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A6H5KUG3_9PHAE1.260e-12687.20Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A6T5N089_HETAK8.280e-8069.40Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A836CAW9_9STRA1.580e-7169.54Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S2S8J5_9STRA1.750e-7062.30Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7R9WYP6_9STRA1.970e-6856.41Mitochondrial inner membrane protease subunit n=1 ... [more]
B8BZJ0_THAPS1.270e-6759.12Mitochondrial inner membrane protease subunit (Fra... [more]
A0A6V1AJW1_9STRA2.170e-6758.82Mitochondrial inner membrane protease subunit n=1 ... [more]
K0S0N9_THAOC1.830e-6555.91Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7J7IBZ0_9RHOD4.080e-6553.50Mitochondrial inner membrane protease subunit n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:2127718..2133182 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score391.7
Seed ortholog evalue2.8e-106
Seed eggNOG ortholog2880.D8LS42
Preferred nameTPP1
KEGG koko:K03100
KEGG Pathwayko02024,ko03060,map02024,map03060
GOsGO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006465,GO:0006508,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008233,GO:0009507,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009657,GO:0009668,GO:0009987,GO:0010027,GO:0010467,GO:0016020,GO:0016043,GO:0016485,GO:0016787,GO:0019538,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0034641,GO:0042651,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0051604,GO:0055035,GO:0061024,GO:0070011,GO:0071704,GO:0071840,GO:0140096,GO:1901564
EggNOG free text desc.serine-type peptidase activity
EggNOG OGsCOG0681@1,KOG0171@2759
EC3.4.21.89
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionSignal peptidase I (SPase I) (Leader peptidase I)
Ec32 orthologEc-12_004880.1
Exons4
Model size1542
Cds size831
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1843.1prot_P-fluviatile_contig13.1843.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 2128359..2133112 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815571.0404584-UTR-P-fluviatile_contig13:2127717..21283581622815571.0404584-UTR-P-fluviatile_contig13:2127717..2128358Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2127718..2128358 -
1693562281.5750957-UTR-P-fluviatile_contig13:2127717..21283581693562281.5750957-UTR-P-fluviatile_contig13:2127717..2128358Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2127718..2128358 -
1622815571.1050336-UTR-P-fluviatile_contig13:2133112..21331821622815571.1050336-UTR-P-fluviatile_contig13:2133112..2133182Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2133113..2133182 -
1693562281.6210792-UTR-P-fluviatile_contig13:2133112..21331821693562281.6210792-UTR-P-fluviatile_contig13:2133112..2133182Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 2133113..2133182 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815571.0548797-CDS-P-fluviatile_contig13:2128358..21285381622815571.0548797-CDS-P-fluviatile_contig13:2128358..2128538Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2128359..2128538 -
1693562281.586984-CDS-P-fluviatile_contig13:2128358..21285381693562281.586984-CDS-P-fluviatile_contig13:2128358..2128538Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2128359..2128538 -
1622815571.0690584-CDS-P-fluviatile_contig13:2129151..21292561622815571.0690584-CDS-P-fluviatile_contig13:2129151..2129256Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2129152..2129256 -
1693562281.5986397-CDS-P-fluviatile_contig13:2129151..21292561693562281.5986397-CDS-P-fluviatile_contig13:2129151..2129256Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2129152..2129256 -
1622815571.080566-CDS-P-fluviatile_contig13:2129606..21298721622815571.080566-CDS-P-fluviatile_contig13:2129606..2129872Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2129607..2129872 -
1693562281.6063488-CDS-P-fluviatile_contig13:2129606..21298721693562281.6063488-CDS-P-fluviatile_contig13:2129606..2129872Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2129607..2129872 -
1622815571.0912898-CDS-P-fluviatile_contig13:2132832..21331121622815571.0912898-CDS-P-fluviatile_contig13:2132832..2133112Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2132833..2133112 -
1693562281.613676-CDS-P-fluviatile_contig13:2132832..21331121693562281.613676-CDS-P-fluviatile_contig13:2132832..2133112Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 2132833..2133112 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1843.1

>prot_P-fluviatile_contig13.1843.1 ID=prot_P-fluviatile_contig13.1843.1|Name=mRNA_P-fluviatile_contig13.1843.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=277bp
MRPCTSTARAAVILLGLLSRVLSCEAFVSGRTSISTATSGVHPVHSSRGD
APLRKVTARPPSRAVCFPPRASPTLRSIGGDGQGGDGGDGLFRGLKQWWE
RDGKSDLKIYGTSLLLALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKL
SSKLSRPYQRKDVVVFYPPPKFSEFSDRGKNDALIKRVIAVGGDTVQIKD
GSLFVNGQEQFEDYTFEEPEYKWGPQIVPEGMVMVLGDNRNHSLDSHVWG
FLPTENVIGRAIFKYWPPWRVGAIET*
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mRNA from alignment at P-fluviatile_contig13:2127718..2133182-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1843.1 ID=mRNA_P-fluviatile_contig13.1843.1|Name=mRNA_P-fluviatile_contig13.1843.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5465bp|location=Sequence derived from alignment at P-fluviatile_contig13:2127718..2133182- (Porterinema fluviatile SAG_2381)
CGCCCCCCTCGTTCCGCTCTTCTGCTCCTCGCATTGCCGTACCGCGGTTG
TAGAGGTAGTCAATTTCAGTATGAGGCCATGTACGTCGACCGCTCGTGCG
GCGGTGATCTTGCTGGGATTGCTCTCTCGCGTGTTGTCGTGCGAAGCGTT
CGTCTCTGGAAGAACGTCAATATCAACAGCAACGAGCGGTGTGCATCCGG
TACACAGCAGCAGAGGCGATGCACCGCTTCGTAAAGTCACTGCCAGACCG
CCTTCGCGTGCAGTCTGTTTTCCCCCGCGAGCGTCACCAACGCTGCGATC
GATCGGTGGCGATGGTCAGGGCGGGGATGGTGGCGATGGCCTGTTCAGAG
GTGAGACAGGAGAACGCGGCGCAACGCCAGAAAACATGCGCACACACACC
TTTTCTCTCGCTCGCGCGTACACCTCTCTGCATGCTGTCGCCTGCGGGTA
CTGCCTCCAATACATAACCGCGTGAAAAATGAAGCGAATGAAAACGCGGT
GGCCTTTGATCGATGAAGCTGATACGTGGCATTCTCTTGTGGAGGTATCT
CACACCCGAACTCTCGTGTGCCATACATTTGACCTCACCTGAATCACGCA
CATGTGTGGTACAATCTCAGCTGGAACATTTGTTTTGCGAGGTTGCCTTT
ATCACCTCCAGCAGCAAGCAGCACTCATTGCTACGTTAAATACACTCCTC
TTGTCCACTTTGTTCCTGTGTAGCTTTGATACAAAGGTTTAAAGGAGTCG
GCTACACCATTCTAAACCCAAGATAACAACGAGCCTCCGCGGGGCCCGCC
AAAGCATATTTTTGAGTTGACTTATTTTGCAAGTGCAAATCAAGGTTAAA
CCAAGCAAGTCAGACACCGTGTACATCATACAAGCAGAAAGGCATTGTCC
GAGGGAAAACACGCTTATCGTCGCACAAAACGGAGGCAGGGGCCTTACTT
TGCATCCACATTACCCAGTCTACCCCCAATGTCATAGCTCTAACTAAGAT
AAATAATTAATCATATGATGACTCAGGTCAAAACAGCCACAACGGTACTG
GCTCAAATAAGGTGAGCTTTGAGGTTGAAGACCAGGGTAAGATATCGTGC
CATTAGAGGGCACTGCAGCAGCTATGGGTACCGTTGGCACGCGCAGGTCT
GTTTTGGGGGCTTAGACATCGCAGCACCTTAAAATGTCCGCAAACTGAAC
CGACGCCCGACATCTTCAGCTGCTGTGCTCGCCGCCACATACCCCAACCT
CCTGAACTGCGGGTCTACGGCAGTTGCTCATGCTACGAGCTGCCTCGGAT
GACCCGTATTTCAAAAGATTGGTGCCTGTGACGGCGAGAATATCAGTCGA
GATGTTGGGTGTAGGTCCAGATTCGCGGAGTTTTTTTGCTGCTGTGGCAC
TTCACATCTCTGTCTCGACAGCAGTTGTGAGCGTGTCAACAGTACCCATA
GCTGCTGCAGGGTGCTGATACAAGGCTCGACCTGAGATTAGGTCAGACTA
GGTGCGTCCTTTGCCATCTGGCATTTATCATCCTGGATTTGTGAGGAAAA
GAGCCAGCGCCAGAGGGGCTCTTTGCGGAGTCCCTTAGACATGAAAAAAC
ACCTTCCCGGCGTGGTCCCGACCTGAGGGGGCAGATTCAGTACAATACAC
CATGGAGAGAAAAGTGCTTGGCGGTACGCTCAGAAGTGCTGCTGGGACGG
GGGTATAGACGGCCGCAGCAGCAGCTCGGAATCTCCGCAATCTGGACCGA
CGCACACATTGTTCGCCGCTGGTGTACTTGCCGCCATAGTGACCAAACCC
CTGAACTGCGGGTCATCACAAGCTACTGCCTTAGACCCACAGTTTCACAG
ATTGGCGTCTATGGAAGCGAGCAGAGCACTGGAAGATGTGCCGTGTTGGT
CCAGATTGCGGATATTTCAAGCCGCTGCTGCGCCTCTCGATATCTATGCC
CCAGCTACAGTTCTGAGCGTGCCCAATGCGCACAACGCTGCTGCAGAGTG
CTCGCTCCTGAGCTCGCCCTTCTCGTTGGGACTTGTCCGGAAACTCGCCT
CCGTTTAGCTTAAACCGTTTTGGCTCTTTCGGCTTGGTTTCAAACAAGTG
GATAATTTGACGGTGTTTGATGTAGAAACCTGGAGGTAGGCTGCATGACG
TGCACGTGAGAGCAGCCCCTACCGCCGCTCCGTGCGACAATCCACGATTT
TTCTCTTCCCCAGCGATTTTATTCTATGATTCGCCCCGTGTGCGATTGCT
GGATGCTCATTTGCTGTTTTCCACGTTTTGTCGGTGCGAAATTGGTGCAG
CGGCACCGCCTAACCCAAGGAAGTGGTTTCCCAAGGAAGTTGTTTGCGGC
GAGGACCTTTATTACAGCTGGGAACATCTGCCGTAGAACTCAAGCAGAAG
TTCCGACCTGCAAGAAACTTTCATTGCAACACATTGGGGAAGCGACGTAC
ATGTTGCAAAACCTTTGCACTACGGCAAAAGCGGGGACACCCAAGGCCGA
AGCAGCAGCAGTGAAGAATTTTGCCATCTGTACCCAAATCAGATTGTCGC
GGCGGCTGTATTCGACGGTACGAATCCCAACCTTCCGAAACGCAAAGTAT
CTGAAGCAGCTAGCGGCACGAGTTCATGCTGCAGATCAGGAGTTCAAGAG
ATTTTGGTCTGTGTGGCGGTAAGCACAGCGTTGGAAGGTGTTTGGCCTGT
TTCACTTTGCGGGCCTGTTGAGTCACAGCTTCGGCCTTTGTTGTGCAAGC
CCCAGCAGGAGATCTGAGGGTGACAACGCACATGCTCCCTTTTGCTTTCG
ATTCTCAGCCCTCGACCTCCTAGAAGCCATGTATTTTGAGCCTTAACCGG
TTCGGCTGTTTTGACTTGATATCAGATCGGTGGAATTCTCATCTTGGCTT
TAAAATGGAGGGGGAGGCACACTAAAATGATCTGCCCGCGAATGACATCC
CTAACGCCGCGCGAAGCGATGATCGTCTCTATTTCACTTGCCCAGCGCCT
TCTCGCTGGTATGTCGCACCCCACTGTGTGACTGTCAGATGCTTCTCGCT
ACTGTCCGAACTCATTAGAAATCAATCGCGGTTGACTGGCCACCCTTGAT
GTCAACAATGTAAGCTTGGATAAGACATGCACGAATAATAGAGAAAGAAA
CAAAGCGAACTTTGTTTATGACATCAACAGCAACGGCACCCTGCTCCGCA
ACACACCAGACCGTTCGACGCGCCCTACGCGGCTCTCACGACCAACGGCA
GCGACGTCGACCAGCCCGACCGAATAAACAGCAACACAAATCCCCCGCGA
AACTTTCCAGGTCTCAAACAGTGGTGGGAAAGGGACGGCAAGTCAGATCT
CAAGATCTACGGCACCTCCCTCTTGCTGGCTCTGGTGGTGAGATCGGTGG
CCCTCGAGCCGCGCTTCATCCCGTCCCTGTCCATGTTCCCAACGTTCGAG
ATCGGAGATCAGCTGGCGGTGGACAAGCTCTCGAGCAAGCTTTCTCGTCC
GTACCAGCGGAAGGACGTGGTCGTTTTCTACCCGCCGCCCAAGTTCAGCG
AGTTTTCTGACAGGGGCAAGAATGATGTGAGCCACAGAAAGAGAGGGCGA
GATAACGAGCGGGGGCGAAGAGAGGAGAGAAAGCGAGAGAGAAGAAGAGC
GACGAAGAGATTGACAAACAAACAGGATTAGAGGGACAGAGAGCTTACCC
TGAGGACCTCTTCGGCTACTATTTATCAACACCAAAACATGCGGCATCAC
CATTTTGGTAGACAGCGTTTCCAACGACACGATTCCCTGACGGCTCATCA
ATGCATATGGGGAAGATCGACTTGAAGACTGCATAGCGCGTGTGCTTGTT
GGGCACGCACCACCGTTTCCCCCCCGTCGAATTTAATGTGGCCCGTACAC
CGTTGTGGCCTCGGGTTCTAATCCAGGCCCTTATCAAGCGAGTCATCGCT
GTTGGCGGGGACACGGTGCAAATCAAGGACGGGTCGCTGTTCGTCAATGG
GCAGGAACAGTTCGAGGACTATACTTTCGAGGTGCGTGGCATGTCGTCGT
CACCGGGAAATCCGTGTTTCCACTCACCAACGCCGTCTGAATCCGAGCCG
GTCTTCCGACAAGAGACGAGTCCGGTTGTCAGAGGTTATGGATCAATACA
GGAGACACGAAAATCAGAGGAAGAATAACGCAAGTGAGCCTAGAAGATCT
GAAGAATGCAACGCACATACCTATGTTTCTCCTTCGTGACAATCTCCGTC
TCAGCGGGGATGGCGGTTGTCCCGATCGCCACTTGTTGTCTTTGTTGGTG
AAGAACGATCTGCTGCTGTGCCGGATGCGCGTGGCGCACTAGTCCGCGAT
GTTGGCCCATAGCAGTGTTGGGCATTCCATTCTGGCACTGCCTCAGCCGC
CTTGGGGTCCTTCGTCCCAACGACGACCGGCATGCATTTGCAGTCCTCAA
AAACGTGAAGACGGACCGGTGTTTCCGGTCAGCCTCCAAAGTCGCTCCCG
GCCGATGTCAATGACCAGCCAGAAGAACTCCATCTGTTTTCGGTCACTGC
GGCCAAAGGTGGTGCGTGTGCGATAGCGGCAAGATCTACTAGATTACGGC
GACTATCTGAGAACGTTCGCCCCCCTCGTGTCGCTTTTCCTCAGGAGCCA
GAGTATAAGTGGGGGCCGCAGATTGTCCCCGAGGGCATGGTGATGGTCTT
GGGAGACAACAGAAACCACAGCCTGGACTCTCACGTCTGGGGGTTCTTGC
CGACAGAAAACGTTATCGGAAGGGCCATCTTCAAGTACTGGCCGCCGTGG
CGTGTTGGGGCGATCGAGACCTAGATGGCCTCGGGGGCGGTCCTTCGGAT
CGCCTTCTGAAACCTAGGGAGCCCCCAGCAGTGTATACATACTTGTAGAG
GTGCTTCATGTTTATCCAACGGTTTTGTTTGTGCTCCACACTTTTGTGGA
CAGCCACACAGCCCGCGTGTGTTGCGATGCATGAGCGCCTTCGGGTCTTG
GTTAATCGCGCTTGTCGTAACCGAGAGGCCCTTCCGTTGGTGCTGCACGA
GGTGGAGATTCTTGCATCGCGCGCGAGGAAATGTTTTCGGTGGCAAAAAA
CAATTGCGTCCGTCGCGAGAGCAGGTGTGTCCTTTGCGCCCACTCGCCAA
TTACCTCCTACTGTGTTGTTCGTGTGCGATTGGTACGTCGGTTGCGTCGG
AGGCTAAGGGAATTGTTACCTTCTTGCCCGAAATCCCGGCACCTTTCCTT
TTTTTTTCTCGTCAGAATAGGTCGAATGTTTCGCTGATTTGTGCCCCTGG
TGAAAAACCCCGACGTGCTTTGCGGTCCCCCGAGAGGCCTTGAAAGGATG
CAATCGATGTCTCGTGATGCTTTTTGCGACCACAGCTAGGATAGCGGCGT
ACCTTGGTGCCCCATTTGTCATTGACATCAGAAGCAATGCACCTCGTTTT
GCGCCAAGCGCGAGG
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:2127718..2133182-

>mRNA_P-fluviatile_contig13.1843.1 ID=mRNA_P-fluviatile_contig13.1843.1|Name=mRNA_P-fluviatile_contig13.1843.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1662bp|location=Sequence derived from alignment at P-fluviatile_contig13:2127718..2133182- (Porterinema fluviatile SAG_2381)
ATGAGGCCATGTACGTCGACCGCTCGTGCGGCGGTGATCTTGCTGGGATT
GCTCTCTCGCGTGTTGTCGTGCGAAGCGTTCGTCTCTGGAAGAACGTCAA
TATCAACAGCAACGAGCGGTGTGCATCCGGTACACAGCAGCAGAGGCGAT
GCACCGCTTCGTAAAGTCACTGCCAGACCGCCTTCGCGTGCAGTCTGTTT
TCCCCCGCGAGCGTCACCAACGCTGCGATCGATCGGTGGCGATGGTCAGG
GCGGGGATGGTGGCGATGGCCTGTTCAGAGATGAGGCCATGTACGTCGAC
CGCTCGTGCGGCGGTGATCTTGCTGGGATTGCTCTCTCGCGTGTTGTCGT
GCGAAGCGTTCGTCTCTGGAAGAACGTCAATATCAACAGCAACGAGCGGT
GTGCATCCGGTACACAGCAGCAGAGGCGATGCACCGCTTCGTAAAGTCAC
TGCCAGACCGCCTTCGCGTGCAGTCTGTTTTCCCCCGCGAGCGTCACCAA
CGCTGCGATCGATCGGTGGCGATGGTCAGGGCGGGGATGGTGGCGATGGC
CTGTTCAGAGGTCTCAAACAGTGGTGGGAAAGGGACGGCAAGTCAGATCT
CAAGATCTACGGCACCTCCCTCTTGCTGGCTCTGGTGGTGAGATCGGTGG
CCCTCGAGCCGCGCTTCATCCCGTCCCTGTCCATGTTCCCAACGTTCGAG
ATCGGAGATCAGCTGGCGGTGGACAAGCTCTCGAGCAAGCTTTCTCGTCC
GTACCAGCGGAAGGACGTGGTCGTTTTCTACCCGCCGCCCAAGTTCAGCG
AGTTTTCTGACAGGGGCAAGAATGATGTCTCAAACAGTGGTGGGAAAGGG
ACGGCAAGTCAGATCTCAAGATCTACGGCACCTCCCTCTTGCTGGCTCTG
GTGGTGAGATCGGTGGCCCTCGAGCCGCGCTTCATCCCGTCCCTGTCCAT
GTTCCCAACGTTCGAGATCGGAGATCAGCTGGCGGTGGACAAGCTCTCGA
GCAAGCTTTCTCGTCCGTACCAGCGGAAGGACGTGGTCGTTTTCTACCCG
CCGCCCAAGTTCAGCGAGTTTTCTGACAGGGGCAAGAATGATGCCCTTAT
CAAGCGAGTCATCGCTGTTGGCGGGGACACGGTGCAAATCAAGGACGGGT
CGCTGTTCGTCAATGGGCAGGAACAGTTCGAGGACTATACTTTCGAGGCC
CTTATCAAGCGAGTCATCGCTGTTGGCGGGGACACGGTGCAAATCAAGGA
CGGGTCGCTGTTCGTCAATGGGCAGGAACAGTTCGAGGACTATACTTTCG
AGGAGCCAGAGTATAAGTGGGGGCCGCAGATTGTCCCCGAGGGCATGGTG
ATGGTCTTGGGAGACAACAGAAACCACAGCCTGGACTCTCACGTCTGGGG
GTTCTTGCCGACAGAAAACGTTATCGGAAGGGCCATCTTCAAGTACTGGC
CGCCGTGGCGTGTTGGGGCGATCGAGACCTAGGAGCCAGAGTATAAGTGG
GGGCCGCAGATTGTCCCCGAGGGCATGGTGATGGTCTTGGGAGACAACAG
AAACCACAGCCTGGACTCTCACGTCTGGGGGTTCTTGCCGACAGAAAACG
TTATCGGAAGGGCCATCTTCAAGTACTGGCCGCCGTGGCGTGTTGGGGCG
ATCGAGACCTAG
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