mRNA_P-fluviatile_contig13.1839.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1839.1 vs. uniprot
Match: D8LS47_ECTSI (Predicted methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS47_ECTSI) HSP 1 Score: 561 bits (1445), Expect = 4.920e-193 Identity = 297/388 (76.55%), Postives = 312/388 (80.41%), Query Frame = 3
Query: 840 RRSSCNVTRLTRQQMIDMGLVPPEENRQQHQQTNQLPLPSADEVD----------GEDGCCGGDSAAEESGEPVGLIGHFEAMRLMGQKGKLGSFVGSLDMSLTERDLVSTEEGVALPPAA------GGVEPCLVVSWDELAVVLKKAKKGQYGCWELYADGNSPSKVSDISESTGRPAMLCAPLRSAGPPTMVLGGFAMHRISGGDQKSTMEPGLDTERKVSASGARRSNGRVLDTCTGLGYTAIAAARCKGVTGVVTVELDEVSLRMCSRNPWSREMFDNPKITSLHGDCCEARKMKTRFKDGEFAAIIHDPPARALCKTTDMYGAKFYEDLARVLKPGGTLFHYIGNPESKEGGRLFRGVIDRLIGAGFYECKTDKNAFGVVARR 1955
RR S TRQQMIDMGLVPPE +Q Q L P + E G D AEE E VGLIGHFEA RL+ QKGK G+FVGSLDMS+TER+LVSTEEGVALPP+ G E LV SWDELAVVLKKAKKGQYGCWELYADGN+P KVSDISEST RPAMLCAPLRSAG PTMVLGGFAMHRISGGDQKSTMEPGLDTE KVSASGARR+NGRVLDTCTGLGYTAIAAARC+GV+GVVTVELDEVSLRMC RNPWS+EMF N KITSL GDCCE K F DGEFAAIIHDPPARALCKTTDMYGA FY+DLARVLKPGGTLFHYIGNPES EGGRLFRGVIDRLIGAGF++CKTDK AFGVVARR
Sbjct: 11 RRCSNTALAFTRQQMIDMGLVPPE-GAEQEAQNLLLSRPYSTEXXXXXXXXXXXXGHPAAMADD--AEEPAEAVGLIGHFEASRLLAQKGKEGTFVGSLDMSMTERELVSTEEGVALPPSPAAADGDGDAESNLVASWDELAVVLKKAKKGQYGCWELYADGNTPCKVSDISESTSRPAMLCAPLRSAGAPTMVLGGFAMHRISGGDQKSTMEPGLDTEHKVSASGARRTNGRVLDTCTGLGYTAIAAARCRGVSGVVTVELDEVSLRMCRRNPWSQEMFRNEKITSLLGDCCELVK---DFDDGEFAAIIHDPPARALCKTTDMYGAAFYKDLARVLKPGGTLFHYIGNPESNEGGRLFRGVIDRLIGAGFHDCKTDKKAFGVVARR 392
BLAST of mRNA_P-fluviatile_contig13.1839.1 vs. uniprot
Match: A0A7S4DCZ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCZ9_HETAK) HSP 1 Score: 335 bits (860), Expect = 5.780e-105 Identity = 166/305 (54.43%), Postives = 210/305 (68.85%), Query Frame = 3
Query: 1047 FEAMRLMGQKGKLGSFVGSLDMSLTERDLVSTEEGVALPPAAGGVEPCLVVSWDELAVVLKKAKKGQYGCWELYADGN-SPSKVSDISESTGRPAMLCAPLRSAGPPTMVLGGFAMHRISGGDQKST-MEPGLDTERKVSASGARRSNGRVLDTCTGLGYTAIAAARCKGVTGVVTVELDEVSLRMCSRNPWSREMFDNPKITSLHGDCCEARKMKTRFKDGEFAAIIHDPPARALCKTTDMYGAKFYEDLARVLKPGGTLFHYIGNPESKEGGRLFRGVIDRLIGAGFYECKTDKNAFGVVARR 1955
F + +K L SF SLD+ TE +++ +GV + EP L+ +W EL +++KAKKG Y C++LY DG P K+S +S++TG PAMLCAPL +G PTMVLGGF MHRI+G D+K T M P DT+ K+ A+G ++ G VLDTC GLGYTAIAAA C + V T+ELD+VS+ MC NPWS+++F N KI +HGD CE K F F+ IIHDPPARALCK +DMYG FY+DL RVL+PG TLFHYIGNP SKE GRLF+GVIDRL +GF + TDK AFGV A++
Sbjct: 105 FRKSKSKDEKEVLASFQASLDLGKTEEEVLVLPKGVGIRHHD---EPVLLATWKELDKIVQKAKKGHYACYQLYNDGGCEPWKISAMSKTTGNPAMLCAPLTGSGAPTMVLGGFTMHRITGDDRKKTSMGPQEDTKNKIKAAGFKKVYGSVLDTCLGLGYTAIAAAECANINKVTTIELDDVSIEMCRNNPWSQDIFQNEKINLIHGDACEVIKS---FPANHFSGIIHDPPARALCKASDMYGQAFYDDLWRVLRPGATLFHYIGNPASKESGRLFKGVIDRLYKSGFQQVSTDKQAFGVTAKK 403
BLAST of mRNA_P-fluviatile_contig13.1839.1 vs. uniprot
Match: A0A7R9U1D7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1D7_9STRA) HSP 1 Score: 311 bits (796), Expect = 3.470e-96 Identity = 166/319 (52.04%), Postives = 208/319 (65.20%), Query Frame = 3
Query: 1029 VGLIGHFEAMRLMGQKGKLGSFVG-----SLDMS--LTERDLVSTEEGVALPPAAGGVEPCLVVSWDELAVVLKKAKKGQYGCWELYADGNSPSKVSDISESTGRPAMLCAPLRSAGPPTMVLGGFAMHRISGGDQKSTMEPGLDTERKVSASGARRSNGRVLDTCTGLGYTAIAAARCKGVTGVVTVELDEVSLRMCSRNPWSREMF---DNPKITSLHGDCCEARKMKTRFKDGEFAAIIHDPPARALCKTTDMYGAKFYEDLARVLKPGGTLFHYIGNPESKEGGRLFRGVIDRLIGAGFYECKTDKNAFGVVARR 1955
VG+I H EA +L+ + + SLD+ T + +EG+ L +GG C +W +L + KKA KGQ GC++L+ DG+ P KVS +S +T RPA L PL + G PTM+LGGF+MHRISGGDQKS+M+P DT K++A GA R G VLDTC GLGYTAI AAR GVT VVT+ELD+ S+ MC NPWS +F +N + GD CE + T D +F+AIIHDPPA ALCK TD+Y FYE L RVLK GG +FHYIGNP+SKE GRL+RG+ RL AGF KTDK AFG+VA+R
Sbjct: 42 VGIISHHEARQLLALRHAAHAVANAPLQVSLDLGRHATADHVEIADEGLLL--RSGGESVC---TWADLKKICKKADKGQQGCYQLFCDGSPPQKVSCLSPNTQRPASLMPPLYAGGAPTMLLGGFSMHRISGGDQKSSMDPMEDTRNKIAALGADRLYGEVLDTCCGLGYTAIEAARSSGVTKVVTIELDDASIEMCEANPWSWPLFGDEENLDVDLRRGDACE---IVTSLADEQFSAIIHDPPALALCKDTDLYSLSFYEQLRRVLKRGGKIFHYIGNPDSKESGRLYRGISSRLQDAGFGSVKTDKTAFGLVAKR 352
BLAST of mRNA_P-fluviatile_contig13.1839.1 vs. uniprot
Match: A0A0G4FLZ1_VITBC (Methyltransf_25 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FLZ1_VITBC) HSP 1 Score: 261 bits (668), Expect = 5.580e-76 Identity = 149/357 (41.74%), Postives = 199/357 (55.74%), Query Frame = 3
Query: 1029 VGLIGHFEAMRLMGQKGKL---GSFVGSLDMSLTERDLVSTEEGVALPPAAGGVEPCLVVSWDELAVVLKKAKKGQYGCWELYADG-NSPSKVSDISESTGRPAMLCAPLRSAGPPTMVLGGFAMHRISGGDQKS--------------------------------------------TMEPGLDTERKVSASGARRSNGRVLDTCTGLGYTAIAAARCKGVTGVVTVELDEVSLRMCSRNPWSREMFDNPKITSLHGDCCEARKMKTRFKDGEFAAIIHDPPARALCKTTDMYGAKFYEDLARVLKPGGTLFHYIGNPESKEGGRLFRGVIDRLIGAGFYECKTDKNAFGVVARR 1955
V ++ H EA ++ L ++D+ L E L+ +EEGVAL + + SW+EL ++ + +KG+ GC+EL DG + P +V+ ISESTGR A L PL G PTM+L GFAMHR+ S +MEP DT RK+ + G GRVLD CTGLGYTAIAA+R +G V+T+ELDEVSL MC RNPWSRE+ + KIT L GD E + T D F+ +IHDPPARALCK D++G FY +L RVL+ GG LFHY+GNP+ +EG L++GV++RL GF+ + AFG+VAR+
Sbjct: 112 VAVVSHREAESIVDSYHSLDGPSEVSVTVDLGLREMRLLLSEEGVALLDHPDRI----LASWEELGDIVDRGRKGRGGCYELVGDGEHKPQRVASISESTGRQAALIPPLTDNGAPTMLLAGFAMHRVVSDSSASPASKRRSSPADDPLATARDRKRRKXXXXXXXXRTRGRTRPSDDGSMEPWKDTMRKLESLGPGGVMGRVLDICTGLGYTAIAASREEGAPAVLTIELDEVSLDMCRRNPWSRELLTSDKITMLRGDASE---LITELPDESFSVVIHDPPARALCKEGDLFGEVFYSELYRVLRRGGRLFHYLGNPDGREGPSLYKGVMERLSQQGFWSIRKVPRAFGLVARK 461
BLAST of mRNA_P-fluviatile_contig13.1839.1 vs. uniprot
Match: A0A4D9D0J7_9STRA (MTS domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0J7_9STRA) HSP 1 Score: 245 bits (625), Expect = 4.420e-70 Identity = 144/345 (41.74%), Postives = 196/345 (56.81%), Query Frame = 3
Query: 1011 EESGEPVGLIGHFEAMRLMGQKGKLGSFVG----------SLDMSLTERDLVSTEEGVALP---------PAAGGVEPCLVVSWDELAVVLKKAKKGQYGCWELYADGNSPSKVSDISESTGRPAMLCAPLRSAGPPTMVLGGFAMHRISGGDQKSTMEPGLDTERKVSASGARRSNGRVLDTCTGLGYTAIAAARCKGVTGVVTVELDEVSLRMCSRNPWSREMFDNPK---------ITSLHGDCCEARKMKTRFKDGEFAAIIHDPPARALCKTT-DMYGAKFYEDLARVLKPGGTLFHYIG-NPESKEGGRLFRGVIDRLIGAGFYECKTDKNAFGVVARR 1955
EE VG+I H EA+ L+ + LG G SLD+ +E +V TEEG+A+P P EP LV +W EL ++ +A++G+ GC+ LY DG P K+S +S TGR A L L GPPT+VLG + MHR+ G + P DT RK+ A ++ G+VLDT TGLGYTAIAAARC VT VVTVE D+ +L M NPWS ++F +P I + GD CE + F+D FAA++HDPP+ AL + +Y FY L RVL+ G LFH++G +P++KE RL++ V+ RL AGF + +A GVVA +
Sbjct: 43 EEELVAVGVISHHEALELLCLREGLGGRGGRGGVHYHDGVSLDLGRSETMVVVTEEGIAVPVVEASHPRHPQREAREPALVATWGELEDIVDQARRGRPGCFTLYTDGTQPWKISAVSLQTGRAANLLPSLHVKGPPTVVLGSYRMHRLDGPRPGRYLGPAEDTRRKLDAIKMKKVYGKVLDTTTGLGYTAIAAARCAHVTEVVTVEADQAALEMSRYNPWSTDLFSSPSARASQGLSPIHMVQGDVCE---LIHSFRDNAFAAVMHDPPSMALSRAAVHLYSPAFYAQLYRVLRWRGRLFHFVGGHPKAKENARLYKTVMQRLEAAGFKKVMILASAQGVVAEK 384
BLAST of mRNA_P-fluviatile_contig13.1839.1 vs. uniprot
Match: W7U6Z1_9STRA (Methyltransferase type 11 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6Z1_9STRA) HSP 1 Score: 246 bits (628), Expect = 6.570e-69 Identity = 143/345 (41.45%), Postives = 197/345 (57.10%), Query Frame = 3
Query: 1011 EESGEPVGLIGHFEAMRLMGQKGKLGSFVG----------SLDMSLTERDLVSTEEGVALP---------PAAGGVEPCLVVSWDELAVVLKKAKKGQYGCWELYADGNSPSKVSDISESTGRPAMLCAPLRSAGPPTMVLGGFAMHRISGGDQKSTMEPGLDTERKVSASGARRSNGRVLDTCTGLGYTAIAAARCKGVTGVVTVELDEVSLRMCSRNPWSREMFDNPKITS---------LHGDCCEARKMKTRFKDGEFAAIIHDPPARALCKTT-DMYGAKFYEDLARVLKPGGTLFHYIG-NPESKEGGRLFRGVIDRLIGAGFYECKTDKNAFGVVARR 1955
EE VG+I H EA+ L+ + LG G SLD+ +E +V TEEG+A+P P EP LV +W EL ++ +A++G+ GC+ LY DG P K+S +S TGR A L L GPPT+VLG + MHR+ G + P DT RK+ A ++ G+VLDT TGLGYTAIAAARC VT VVTVE D+ +L M NPWS ++F +P + + + GD CE + F+D FAA++HDPP+ AL + +Y FY L RVL+ G LFH++G +P++KE RL++ V+ RL AGF + +A GVVA +
Sbjct: 191 EEELVSVGVISHHEALELLCLREGLGGRGGRGGVHYHDGVSLDLGRSETMVVVTEEGIAVPVVEASHPRRPQREAREPALVATWGELEDIVDQARRGRPGCFTLYTDGTQPWKISAVSLQTGRAANLLPSLHVKGPPTVVLGSYRMHRLDGPRPGRYLGPAEDTRRKLDAIKMKKVYGKVLDTTTGLGYTAIAAARCAHVTEVVTVEADQAALEMSRYNPWSADLFSSPSVRASQGLSPIHMVQGDVCE---LIHSFRDNAFAAVMHDPPSMALSRAAVHLYSPAFYAQLYRVLRWRGRLFHFVGGHPKAKENARLYKMVVQRLEAAGFKKVMILASAQGVVAEK 532
BLAST of mRNA_P-fluviatile_contig13.1839.1 vs. uniprot
Match: A0A7S1TCJ3_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCJ3_9RHOD) HSP 1 Score: 214 bits (545), Expect = 3.200e-59 Identity = 138/326 (42.33%), Postives = 180/326 (55.21%), Query Frame = 3
Query: 1035 LIGHFEAMRLMGQKGKLGSFV--------------GSLDMSLTERDLVS----TEEGVALPPAAGGVEPCLVVSWDELAVVLKKAKKGQYGCWELYADGNSPSKVSDISESTGRPAMLCAPLRSAGPPTMVLGGFAMHRISGGDQKSTMEPGLDTERKVSASGARRS-NGRVLDTCTGLGYTAIAAARCKGVTGVVTVELDEVSLRMCSRNPWSREMFDNPKITSLHGDCCEARKMKTRFKDGEFAAIIHDPPARALCKTTDMYGAKFYEDLARVLKPGGTLFHYIGNPESKEGGRLFRGVIDRLIGAGFYECKTDKNAFGVVARR 1955
++ HFEA L+ + G F+ GS ++L RDL+S T EGV + V+WD+LA + KK K G + C+ A P +++ S++TGR A L S PPT VL GF MHR KS +P DT K+SA R +GRVLD CTGLGYTAI AR V V T+ELD + + SRNPWSRE+F NPKI + D A EF++IIHDPPA+A+ + ++Y +FYE+L RVL+ G L+HYIG+P S+E GRL+ GVI+RL AGF K AFGV A R
Sbjct: 70 VLSHFEAAELLRLRFNSGEFIENGCDREIAQRVVMGSFSVNLG-RDLLSEVVVTSEGVQMGVGLNRT----TVTWDDLARMAKKGKSGAFECFPDTA-AVEPRRIATFSDATGRAASLLPVDGSGVPPTAVLAGFGMHRF-----KSNCDPLQDTLLKLSALDRNRQIHGRVLDICTGLGYTAIELARLSTVKSVHTIELDPGMVELQSRNPWSRELFVNPKIERVVAD---ATDHIVSLNSMEFSSIIHDPPAQAM--SGELYTTEFYEELFRVLRFKGKLYHYIGDPRSRESGRLYAGVIERLYQAGFSRVKRHDRAFGVTACR 379
BLAST of mRNA_P-fluviatile_contig13.1839.1 vs. uniprot
Match: A0A7S0JHK9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JHK9_9EUKA) HSP 1 Score: 212 bits (539), Expect = 3.290e-59 Identity = 124/277 (44.77%), Postives = 160/277 (57.76%), Query Frame = 3
Query: 1212 LAVVLKKAKKGQYGCWELYADGN-SPSKVSDISESTGRPAMLCAPLRSAGPPTMVLGGFAMHRISGGDQKSTMEPGLDTERKVSASGARRSNGRVLDTCTGLGYTAIAAARCKGVTGVVTVELDEVSLRMCSRNPWSREMFDNPKITSLHGDCCEARKMKTRFKDGEFAAIIHDPPARALCKTTDMYGAKFYEDLARVLKPGGTLFHYIGNPESKEGGRLFRGVIDRLIGAGFYECKTDKNAFGVVARR*NLDLPMTCRWSEKWEQRFADRSAAGVP 2039
L+ + K AKK + G WE YA+G PSKV SE T R A L PL PPT VL GF MHR+ ++PG DT RK+ A G++ NGRVLD CTGLGYTAI AA V VVT+ELD + + + NPWS E+F++PKI L GD E + DG F A IHDPP AL +++ + Y L R L+PGG LFHY+G+P SK GR+F+G+++RL AGF E + A+G+ A +D+P R S + A G P
Sbjct: 50 LSFLAKAAKKRKLGAWECYANGEYPPSKVEGFSERTRRTASLL-PLPGGVPPTAVLSGFNMHRMR------DVDPGEDTRRKLGAIGSKL-NGRVLDVCTGLGYTAIGAAARPTVDEVVTIELDPLMIELQRANPWSAELFESPKIVRLLGDATE---LLPALPDGHFHACIHDPPTAALAG--ELFSVEIYRQLRRCLRPGGVLFHYVGDPASKASGRMFKGIVERLRVAGF-EARVHAKAYGIAAVA--VDMPCERRRSVVSPEMRVPTRALGNP 310
BLAST of mRNA_P-fluviatile_contig13.1839.1 vs. uniprot
Match: A0A2V3IYU6_9FLOR (MTS domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYU6_9FLOR) HSP 1 Score: 211 bits (536), Expect = 1.620e-58 Identity = 127/316 (40.19%), Postives = 174/316 (55.06%), Query Frame = 3
Query: 1023 EPVGLIGHFEAMRLMGQKGK----LGSFVGSLDMSLTERDLVSTE---EGVALPPAAGGVEPCLVVSWDELAVVLKKAKKGQYGCWELYADGNSPSKVSDISESTGRPAMLCAPLRSAGPPTMVLGGFAMHRISGGDQKSTMEPGLDTERKVSASGARRSNGRVLDTCTGLGYTAIAAARCKGVTGVVTVELDEVSLRMCSRNPWSREMFDNPKITSLHGDCCEARKMKTRFKDGEFAAIIHDPPARALCKTTDMYGAKFYEDLARVLKPGGTLFHYIGNPESKEGGRLFRGVIDRLIGAGFYECKTDKNAFGVVA 1949
+PV ++ HFEA K + L + G ++L L + EGV+LPP P ++SW L K +K G +E++ D ++P K++++S T RPA L P+ PPT+VL GF+MHR + +P DT K++A R GRVLD CTGLGYTAIAAAR VT + T+ELD + + + RNPWS E+F KI + D +A R +D F IIHDPPAR L D+Y FY L RV LFHYIG+P S+E GRL++G+ DRL+ AGF + A+G+ A
Sbjct: 35 DPVLVLSHFEARHFFSLKSQATTQLTAHPGPFSINLGHDSLPAISLDHEGVSLPP-----HPHPLLSWAHLK---KLSKNNSTGAYEVFPDLSAPEKIAELSLLTNRPASLL-PVGPNVPPTLVLAGFSMHRFK------SFDPAADTAEKLAALSPLR--GRVLDICTGLGYTAIAAARSPAVTSLTTIELDPMVISIARRNPWSAELFSLRKIKIVEDDATQALP---RLQDKSFDVIIHDPPARVLAG--DLYSLLFYRQLRRVCASRALLFHYIGDPNSRESGRLYKGITDRLLQAGFGRIQLQPRAYGLTA 328
BLAST of mRNA_P-fluviatile_contig13.1839.1 vs. uniprot
Match: A0A7S0G4I5_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G4I5_9RHOD) HSP 1 Score: 209 bits (533), Expect = 5.030e-58 Identity = 126/326 (38.65%), Postives = 180/326 (55.21%), Query Frame = 3
Query: 1017 SGEPVGLIGHFEAMRLMGQKGKLGSFVG-------------SLDMSLTERDLVSTE-EGVALPPAAGGVEPCLVVSWDELAVVLKKAKKGQYGCWELYADGNSPSKVSDISESTGRPAMLCAPLRSAGPPTMVLGGFAMHRISGGDQKSTMEPGLDTERKVSASGARRSNGRVLDTCTGLGYTAIAAARCKGVTGVVTVELDEVSLRMCSRNPWSREMFDNPKITSLHGDCCEARKMKTRFKDGEFAAIIHDPPARALCKTTDMYGAKFYEDLARVLKPGGTLFHYIGNPESKEGGRLFRGVIDRLIGAGFYECKTDKNAFGVVAR 1952
+GE ++ H++A L+ +G++ V S+D+ + +S + GV L A + +SW +L + KK K G Y C+E DG ++++ S+ T R A+ P+ PT+V+GGF MHRI D P DT+ K+ A G ++G LD CTGLGYTAIA A V V T+ELD + + RNPWSR +F NPKI H + +A K+ D F+ I+HDPPA ALC ++Y +FY+ L R LKP G L+HY+G+P SKE GRL+ G++DRL AGF + K AFG++AR
Sbjct: 36 AGEDCLVLAHYKASELLKVRGRVNELVTLKQASRCRVGGPFSVDLGTRALESISADARGVFLDDDA------IPLSWKDLQKMTKKGKTGAYECYE---DGWE--RIAEFSDKTQR-AISLLPIAKGVAPTVVIGGFGMHRIKSSD------PWTDTQLKMKALGT--ASGNALDICTGLGYTAIALADQSTVDRVTTIELDPSIVNIQLRNPWSRRLFQNPKI---HREVGDAVKVLPTLPDRSFSTIVHDPPALALCN--ELYTLEFYQQLRRTLKPSGKLYHYVGDPASKESGRLYNGIMDRLQQAGFQQVKKADGAFGIIAR 336 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1839.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1839.1 >prot_P-fluviatile_contig13.1839.1 ID=prot_P-fluviatile_contig13.1839.1|Name=mRNA_P-fluviatile_contig13.1839.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=449bp MHRPTKRRRRWPRKSSPFCLAALVLGQSDALVPTAHGPSSAAEALRGQYTback to top mRNA from alignment at P-fluviatile_contig13:2102981..2117458+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1839.1 ID=mRNA_P-fluviatile_contig13.1839.1|Name=mRNA_P-fluviatile_contig13.1839.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=14478bp|location=Sequence derived from alignment at P-fluviatile_contig13:2102981..2117458+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:2102981..2117458+ >mRNA_P-fluviatile_contig13.1839.1 ID=mRNA_P-fluviatile_contig13.1839.1|Name=mRNA_P-fluviatile_contig13.1839.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2694bp|location=Sequence derived from alignment at P-fluviatile_contig13:2102981..2117458+ (Porterinema fluviatile SAG_2381)back to top |