mRNA_P-fluviatile_contig13.1825.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1825.1
Unique NamemRNA_P-fluviatile_contig13.1825.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig13.1825.1 vs. uniprot
Match: D7FPL3_ECTSI (V-type h-atpase subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPL3_ECTSI)

HSP 1 Score: 335 bits (859), Expect = 2.390e-109
Identity = 170/187 (90.91%), Postives = 179/187 (95.72%), Query Frame = 1 
Query:   46 MTTSQEVFCTGDYCNAGWPEVLTHMSPYGWANMGIAFALGLSVLGAGWGIFLTGSSIMGAAIKAPRIRSKNLVSVIFCEATAIYGVIMAIILTNKINDPPTNLETYEWTTAYFAGYALFAGGLGVGLTNLASGISVGVAGSACALGDAQDASLFVKILIVEIFASALGIFGIIVGIIQSNSAEFPQV 606
            MT+S EVFCT D CNAGWPEVLTHMSP+GWAN+GI FALGLSVLGAGWGIFLTGSSIMGAA+KAPRIRSKNLVSVIFCEATAIYGVIMAIILTNKI DPP ++E+YEWTTA+FAGYALF GGLGVGLTNLASGISVGVAGSACALGDAQDASLFVKILIVEIFASALGIFGIIVGIIQSN A+FPQV
Sbjct:    1 MTSSTEVFCTNDLCNAGWPEVLTHMSPWGWANLGIGFALGLSVLGAGWGIFLTGSSIMGAAVKAPRIRSKNLVSVIFCEATAIYGVIMAIILTNKIQDPPEDIESYEWTTAFFAGYALFCGGLGVGLTNLASGISVGVAGSACALGDAQDASLFVKILIVEIFASALGIFGIIVGIIQSNVADFPQV 187
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BLAST of mRNA_P-fluviatile_contig13.1825.1 vs. uniprot
Match: A0A835YTX8_9STRA (V-type h-atpase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTX8_9STRA)

HSP 1 Score: 301 bits (770), Expect = 6.140e-96
Identity = 153/187 (81.82%), Postives = 168/187 (89.84%), Query Frame = 1 
Query:   49 TTSQEVFCTGDYCNAGWPEVLTHMSPYGWANMGIAFALGLSVLGAGWGIFLTGSSIMGAAIKAPRIRSKNLVSVIFCEATAIYGVIMAIILTNKINDPPTNLET--YEWTTAYFAGYALFAGGLGVGLTNLASGISVGVAGSACALGDAQDASLFVKILIVEIFASALGIFGIIVGIIQSNSAEFPQ 603
            T+  EV C+ D+CN GWP+VLTHMSP+GWA MGIAFALG S++GA WGIF+TGSSIMGAAIKAPRIRSKNLVSVIFCEATAIYGVIMAIIL NKI+DPP   +T  YEWTTA+FAGYALF+ GLGVGLTNLASG+SVG+AGS+CAL DAQD SLFVKILIVEIFASALGIFGIIVGIIQSNSA FP 
Sbjct:    4 TSPSEVLCSSDHCNQGWPDVLTHMSPFGWAYMGIAFALGFSIVGAAWGIFVTGSSIMGAAIKAPRIRSKNLVSVIFCEATAIYGVIMAIILLNKISDPPAPADTASYEWTTAFFAGYALFSAGLGVGLTNLASGVSVGIAGSSCALADAQDGSLFVKILIVEIFASALGIFGIIVGIIQSNSAAFPN 190
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BLAST of mRNA_P-fluviatile_contig13.1825.1 vs. uniprot
Match: A0A6U1PSC4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PSC4_9STRA)

HSP 1 Score: 268 bits (685), Expect = 2.900e-83
Identity = 137/182 (75.27%), Postives = 155/182 (85.16%), Query Frame = 1 
Query:   70 CTGDYCNAGWPEVLTHMSPYGWANMGIAFALGLSVLGAGWGIFLTGSSIMGAAIKAPRIRSKNLVSVIFCEATAIYGVIMAIILTNKINDPP----TNLETYEWTTAYFAGYALFAGGLGVGLTNLASGISVGVAGSACALGDAQDASLFVKILIVEIFASALGIFGIIVGIIQSNSAEFPQ 603
            C G++CN GW EVLT+MSPYGWAN GIA  LG SV GA WGI+LTGSS++GAAIKAPRIRSKNL+SVIFCEATAIYGVI+AIIL NK+ +P     T  E ++W T YFAGYA+F  GL VGLTN+ASG+SVG+AGS+CALGDAQD  LFVKILIVEIFASALGIFGIIVGIIQSNSA FP+
Sbjct:    4 CVGEFCNYGWSEVLTNMSPYGWANFGIAIGLGFSVAGAAWGIWLTGSSLVGAAIKAPRIRSKNLISVIFCEATAIYGVILAIILLNKVVEPEDKSGTFPENWDWNTFYFAGYAVFTSGLSVGLTNIASGVSVGIAGSSCALGDAQDPGLFVKILIVEIFASALGIFGIIVGIIQSNSAAFPE 185
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BLAST of mRNA_P-fluviatile_contig13.1825.1 vs. uniprot
Match: B8BS55_THAPS (V-type h-atpase subunit n=5 Tax=Bacillariophyta TaxID=2836 RepID=B8BS55_THAPS)

HSP 1 Score: 267 bits (683), Expect = 5.940e-83
Identity = 136/181 (75.14%), Postives = 155/181 (85.64%), Query Frame = 1 
Query:   70 CTGDYCNAGWPEVLTHMSPYGWANMGIAFALGLSVLGAGWGIFLTGSSIMGAAIKAPRIRSKNLVSVIFCEATAIYGVIMAIILTNKINDPPTNL----ETYEWTTAYFAGYALFAGGLGVGLTNLASGISVGVAGSACALGDAQDASLFVKILIVEIFASALGIFGIIVGIIQSNSAEFP 600
            C   YCNAGW EVLTHMSPYG+AN GIAF LGLSV+GA WGI+LTGSS++GAA+KAPRIRSKNL+SVIFCEATAIYGVIMAIIL NK+  P   +    E ++W   Y+AGY +F+ GL VGLTN+ASG+SVG+AGS+CA+GDAQDASLFVKILIVEIFASALGIFGIIVGIIQSNS  FP
Sbjct:    6 CYSTYCNAGWSEVLTHMSPYGYANFGIAFGLGLSVVGAAWGIWLTGSSLVGAAVKAPRIRSKNLISVIFCEATAIYGVIMAIILANKVKKPDEAVSQLSENWDWPGYYYAGYGMFSSGLSVGLTNIASGVSVGIAGSSCAIGDAQDASLFVKILIVEIFASALGIFGIIVGIIQSNSCTFP 186
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BLAST of mRNA_P-fluviatile_contig13.1825.1 vs. uniprot
Match: A0A7R9W489_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W489_9STRA)

HSP 1 Score: 267 bits (682), Expect = 8.090e-83
Identity = 135/185 (72.97%), Postives = 159/185 (85.95%), Query Frame = 1 
Query:   55 SQEVFCTGDYCNAGWPEVLTHMSPYGWANMGIAFALGLSVLGAGWGIFLTGSSIMGAAIKAPRIRSKNLVSVIFCEATAIYGVIMAIILTNKINDPPTNL---ETYEWTTAYFAGYALFAGGLGVGLTNLASGISVGVAGSACALGDAQDASLFVKILIVEIFASALGIFGIIVGIIQSNSAEFP 600
            S + +C+  YCN GW EVL+HMSPYG+AN G+AF LGLSV+GA WGI+LTGSS++GAA+KAPRIRSKNL+SVIFCEATAIYGVIMAIIL+NKI  P  +    E ++WT  Y+AGY +F+ GL VGLTN+ASGISVG+AGS+CA+GDAQDASLFVKILIVEIFASALGIFGIIVGIIQSN+   P
Sbjct:    2 SNQDYCSSKYCNEGWLEVLSHMSPYGYANFGVAFGLGLSVVGAAWGIWLTGSSLVGAAVKAPRIRSKNLISVIFCEATAIYGVIMAIILSNKIKKPDDSANFDENWDWTGFYYAGYGMFSAGLSVGLTNVASGISVGIAGSSCAIGDAQDASLFVKILIVEIFASALGIFGIIVGIIQSNACTIP 186
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BLAST of mRNA_P-fluviatile_contig13.1825.1 vs. uniprot
Match: A0A7S1U6D2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6D2_9STRA)

HSP 1 Score: 266 bits (680), Expect = 1.610e-82
Identity = 137/190 (72.11%), Postives = 158/190 (83.16%), Query Frame = 1 
Query:   46 MTTSQEVFCTGDYCNAGWPEVLTHMSPYGWANMGIAFALGLSVLGAGWGIFLTGSSIMGAAIKAPRIRSKNLVSVIFCEATAIYGVIMAIILTNKINDPP----TNLETYEWTTAYFAGYALFAGGLGVGLTNLASGISVGVAGSACALGDAQDASLFVKILIVEIFASALGIFGIIVGIIQSNSAEFPQ 603
            M+ +    C G+ CN GW EVLTH+SPY W N+GIAF LGLSVLGA WGI++TGSS++GAA+KAPRIRSKNLVSVIFCEATAIYGVI+AIIL N I DP     T  E ++W T YF+GYA+FA GLGVGLTNLASGISVG+AGS+CAL DAQ++ LFVK+LIVEIFASALGIFGIIVGII SN A+FP 
Sbjct:    1 MSLNSAYGCEGELCNKGWEEVLTHISPYWWGNVGIAFGLGLSVLGAAWGIWITGSSLVGAAVKAPRIRSKNLVSVIFCEATAIYGVIIAIILMNHIKDPEEKGYTIQEDWDWNTFYFSGYAVFAAGLGVGLTNLASGISVGIAGSSCALADAQNSDLFVKMLIVEIFASALGIFGIIVGIIMSNDADFPS 190
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BLAST of mRNA_P-fluviatile_contig13.1825.1 vs. uniprot
Match: A0A7S1FY18_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY18_9STRA)

HSP 1 Score: 266 bits (680), Expect = 1.660e-82
Identity = 133/186 (71.51%), Postives = 158/186 (84.95%), Query Frame = 1 
Query:   64 VFCTGDYCNAGWPEVLTHMSPYGWANMGIAFALGLSVLGAGWGIFLTGSSIMGAAIKAPRIRSKNLVSVIFCEATAIYGVIMAIILTNKINDPPTNL-ETYEWTTAYFAGYALFAGGLGVGLTNLASGISVGVAGSACALGDAQDASLFVKILIVEIFASALGIFGIIVGIIQSNSAEFPQV*VDN 618
             +C  +YCN GW E+ +HMSPYG+AN GIAF LG SV+GA WGI+LTGSS++GAA+KAPRIRSKNL+SVIFCEATAIYGVIMAIIL+NKI  P   + E ++W   Y+AGY +F+ GL VGLTN+ASGISVG+AGSACA+GDAQDASLFVK+LIVEIFASALGIFGIIVGIIQSN+  FP   ++N
Sbjct:    6 AYCESEYCNQGWNELFSHMSPYGYANFGIAFGLGFSVVGAAWGIWLTGSSLVGAAVKAPRIRSKNLISVIFCEATAIYGVIMAIILSNKIKTPEDAMGEDWDWNGFYYAGYGMFSAGLSVGLTNIASGISVGIAGSACAIGDAQDASLFVKVLIVEIFASALGIFGIIVGIIQSNACTFPVTALEN 191
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BLAST of mRNA_P-fluviatile_contig13.1825.1 vs. uniprot
Match: A0A7S3LBA5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBA5_9STRA)

HSP 1 Score: 266 bits (680), Expect = 1.720e-82
Identity = 136/191 (71.20%), Postives = 161/191 (84.29%), Query Frame = 1 
Query:   40 NKMTTSQEVFCTGDYCNAGWPEVLTHMSPYGWANMGIAFALGLSVLGAGWGIFLTGSSIMGAAIKAPRIRSKNLVSVIFCEATAIYGVIMAIILTNKINDPPTNL----ETYEWTTAYFAGYALFAGGLGVGLTNLASGISVGVAGSACALGDAQDASLFVKILIVEIFASALGIFGIIVGIIQSNSAEFP 600
            NKMT      C  ++CN GW +VLTHMSPYG+A+ G+AF LGLS++GA WGI+LTGSS++GAA+KAPRIRSKNL+SVIFCEATAIYGVIMAIILTNKI +P  N     E ++W   Y+AGY +F+ GL VGLTN+ASG+SVG+AGS+CA+GDAQDASLFVKILIVEIFASALGIFGIIVGIIQSN+  FP
Sbjct:    3 NKMT------CQSEFCNQGWSDVLTHMSPYGFASFGVAFGLGLSIVGAAWGIWLTGSSLVGAAVKAPRIRSKNLISVIFCEATAIYGVIMAIILTNKIKEPEDNGFYLDENWDWAGYYYAGYGMFSAGLSVGLTNIASGVSVGIAGSSCAIGDAQDASLFVKILIVEIFASALGIFGIIVGIIQSNACIFP 187
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BLAST of mRNA_P-fluviatile_contig13.1825.1 vs. uniprot
Match: A0A6T7QKL8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6T7QKL8_9STRA)

HSP 1 Score: 266 bits (679), Expect = 2.340e-82
Identity = 135/181 (74.59%), Postives = 154/181 (85.08%), Query Frame = 1 
Query:   70 CTGDYCNAGWPEVLTHMSPYGWANMGIAFALGLSVLGAGWGIFLTGSSIMGAAIKAPRIRSKNLVSVIFCEATAIYGVIMAIILTNKINDPPTNLET----YEWTTAYFAGYALFAGGLGVGLTNLASGISVGVAGSACALGDAQDASLFVKILIVEIFASALGIFGIIVGIIQSNSAEFP 600
            C+  YCN GW EVLTHMSPYG+AN GIAF LGLSV+GA WGI+LTGSS++GAA+KAPRIRSKNL+SVIFCEATAIYGVIMAIIL NK+  P   L T    ++W   Y+AGY +F+ GL VGLTN+ASG+SVG+AGS+CA+GDAQD SLFVKILIVEIFASALGIFGIIVGIIQSNS  FP
Sbjct:    6 CSSAYCNQGWSEVLTHMSPYGYANFGIAFGLGLSVVGAAWGIWLTGSSLVGAAVKAPRIRSKNLISVIFCEATAIYGVIMAIILANKVKKPEEALSTLGEDWDWAGYYYAGYGMFSSGLSVGLTNIASGVSVGIAGSSCAIGDAQDPSLFVKILIVEIFASALGIFGIIVGIIQSNSCTFP 186
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BLAST of mRNA_P-fluviatile_contig13.1825.1 vs. uniprot
Match: A0A7S2PCT9_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PCT9_9STRA)

HSP 1 Score: 261 bits (668), Expect = 1.120e-80
Identity = 133/183 (72.68%), Postives = 153/183 (83.61%), Query Frame = 1 
Query:   70 CTGDYCNAGWPEVLTHMSPYGWANMGIAFALGLSVLGAGWGIFLTGSSIMGAAIKAPRIRSKNLVSVIFCEATAIYGVIMAIILTNKINDPPTNL-----ETYEWTTAYFAGYALFAGGLGVGLTNLASGISVGVAGSACALGDAQDASLFVKILIVEIFASALGIFGIIVGIIQSNSAEFPQ 603
            C   YCN GW EVLTHMSPYGWA+ G+AF LGLSV+GA WGI+LTGSS++GAA+KAPRIRSKNL+SVIFCEATAIYGVIMAIILTNKI  P         + +++   YFAGY +F+ GL VGLTN+ASGISVG+AGS+CA+ DAQD SLFVKILIVEIFASALGIFGIIVGIIQSN+  FP+
Sbjct:    8 CQSAYCNQGWSEVLTHMSPYGWASFGVAFGLGLSVVGAAWGIWLTGSSLVGAAVKAPRIRSKNLISVIFCEATAIYGVIMAIILTNKIKSPEDGYGNQLPDGWDYNEYYFAGYGMFSAGLSVGLTNIASGISVGIAGSSCAIADAQDPSLFVKILIVEIFASALGIFGIIVGIIQSNACTFPE 190
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1825.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPL3_ECTSI2.390e-10990.91V-type h-atpase subunit n=1 Tax=Ectocarpus silicul... [more]
A0A835YTX8_9STRA6.140e-9681.82V-type h-atpase subunit n=1 Tax=Tribonema minus Ta... [more]
A0A6U1PSC4_9STRA2.900e-8375.27Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
B8BS55_THAPS5.940e-8375.14V-type h-atpase subunit n=5 Tax=Bacillariophyta Ta... [more]
A0A7R9W489_9STRA8.090e-8372.97Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1U6D2_9STRA1.610e-8272.11Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1FY18_9STRA1.660e-8271.51Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S3LBA5_9STRA1.720e-8271.20Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A6T7QKL8_9STRA2.340e-8274.59Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2PCT9_9STRA1.120e-8072.68Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:1989465..1992387 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score337.8
Seed ortholog evalue3.2e-90
Seed eggNOG ortholog2880.D7FPL3
Preferred nameATP6V0B
KEGG rclassRC00002,RC03462
KEGG koko:K03661,ko:K15376
KEGG TC3.A.2.2
KEGG ReactionR09726,R09735
KEGG Pathwayko00190,ko00790,ko01100,ko04142,ko04145,ko04721,ko04727,ko05110,ko05120,ko05152,ko05323,map00190,map00790,map01100,map04142,map04145,map04721,map04727,map05110,map05120,map05152,map05323
KEGG ModuleM00160
GOsGO:0000041,GO:0000220,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0001763,GO:0002009,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005773,GO:0005774,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006873,GO:0006885,GO:0007035,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007424,GO:0007430,GO:0008104,GO:0008150,GO:0008286,GO:0008324,GO:0008553,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009888,GO:0009894,GO:0009987,GO:0010008,GO:0010033,GO:0010243,GO:0010506,GO:0012505,GO:0012506,GO:0015031,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0015682,GO:0015833,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016241,GO:0016462,GO:0016469,GO:0016471,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019725,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0023052,GO:0030001,GO:0030003,GO:0030004,GO:0030139,GO:0030641,GO:0030659,GO:0030666,GO:0030670,GO:0031090,GO:0031224,GO:0031323,GO:0031329,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032868,GO:0032869,GO:0032870,GO:0032991,GO:0033036,GO:0033176,GO:0033177,GO:0033179,GO:0033181,GO:0033572,GO:0034220,GO:0035239,GO:0035295,GO:0036442,GO:0042221,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0043492,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044769,GO:0045184,GO:0045335,GO:0045851,GO:0046961,GO:0048729,GO:0048731,GO:0048754,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0051716,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0060429,GO:0060446,GO:0060541,GO:0060562,GO:0061138,GO:0065007,GO:0065008,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071944,GO:0072512,GO:0090662,GO:0097708,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0099131,GO:0099132,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902600
EggNOG free text desc.ATP hydrolysis coupled proton transport
EggNOG OGsCOG0636@1,KOG0233@2759
EC2.10.1.1,2.7.7.75
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionV-ATPase proteolipid subunit C-like domain
Ec32 orthologEc-12_001030.1
Exons2
Model size1843
Cds size564
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1825.1prot_P-fluviatile_contig13.1825.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 1989510..1991153 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815568.6507185-UTR-P-fluviatile_contig13:1989464..19895091622815568.6507185-UTR-P-fluviatile_contig13:1989464..1989509Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1989465..1989509 +
1693562276.4311616-UTR-P-fluviatile_contig13:1989464..19895091693562276.4311616-UTR-P-fluviatile_contig13:1989464..1989509Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1989465..1989509 +
1622815568.692938-UTR-P-fluviatile_contig13:1991153..19923871622815568.692938-UTR-P-fluviatile_contig13:1991153..1992387Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1991154..1992387 +
1693562276.6526978-UTR-P-fluviatile_contig13:1991153..19923871693562276.6526978-UTR-P-fluviatile_contig13:1991153..1992387Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1991154..1992387 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815568.6658368-CDS-P-fluviatile_contig13:1989509..19898001622815568.6658368-CDS-P-fluviatile_contig13:1989509..1989800Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1989510..1989800 +
1693562276.626513-CDS-P-fluviatile_contig13:1989509..19898001693562276.626513-CDS-P-fluviatile_contig13:1989509..1989800Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1989510..1989800 +
1622815568.680751-CDS-P-fluviatile_contig13:1990880..19911531622815568.680751-CDS-P-fluviatile_contig13:1990880..1991153Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1990881..1991153 +
1693562276.636325-CDS-P-fluviatile_contig13:1990880..19911531693562276.636325-CDS-P-fluviatile_contig13:1990880..1991153Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1990881..1991153 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1825.1

>prot_P-fluviatile_contig13.1825.1 ID=prot_P-fluviatile_contig13.1825.1|Name=mRNA_P-fluviatile_contig13.1825.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=188bp
MTTSQEVFCTGDYCNAGWPEVLTHMSPYGWANMGIAFALGLSVLGAGWGI
FLTGSSIMGAAIKAPRIRSKNLVSVIFCEATAIYGVIMAIILTNKINDPP
TNLETYEWTTAYFAGYALFAGGLGVGLTNLASGISVGVAGSACALGDAQD
ASLFVKILIVEIFASALGIFGIIVGIIQSNSAEFPQV*
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mRNA from alignment at P-fluviatile_contig13:1989465..1992387+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1825.1 ID=mRNA_P-fluviatile_contig13.1825.1|Name=mRNA_P-fluviatile_contig13.1825.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2923bp|location=Sequence derived from alignment at P-fluviatile_contig13:1989465..1992387+ (Porterinema fluviatile SAG_2381)
CGCGGGCGAAGCGTGTAATAGGACTGTGTTCTGGACGGCAACAAGATGAC
CACATCGCAGGAAGTATTCTGCACGGGGGATTACTGCAATGCCGGCTGGC
CGGAGGTTCTCACGCACATGTCGCCCTACGGTTGGGCGAACATGGGCATC
GCGTTCGCGTTGGGATTGTCTGTGCTCGGGGCGGGTTGGGGCATCTTCCT
CACGGGATCGAGCATCATGGGCGCGGCTATCAAGGCTCCTCGAATCCGGT
CGAAGAACTTGGTTAGCGTAATTTTCTGCGAGGCGACGGCGATTTATGGC
GTGATCATGGCGATCATCCTGACCAACAAAATCAATGTGAGTGGTGGCAT
CGAGCCACGTGCAGCAGGCCGGCCAACCAGTCTTCATCCGAGGCCTCAGT
GCACTATCACACCTCTCGGTCGCTTTGCGCTTCGAAGGGGGGGGGGGTTG
ACGCGCAAGCAAAAATCCCGCCGCCTTTTCTACATAAGTCGAAGGAGGCG
TTGAAGTCGTATGTGTTTCGAAGGGGCCCGATGAACGATTTGAGAGAACC
GGCTTTAAACTGGGTACTGCTATGTCATGTGCTCTTGACTCACAAGATCG
TTGCCTTTGATTTATCGCAATTTGGTCTCAAAAAGACGCTCGCCACCTTA
AAAAAAACTGAAGGATGTCCTTTCGGAGGGAGCACAAAGAGCGATCGCGC
GACCTGACCTGCTACCGTGGCGCGGTGTACAGCAGTACCGCCCTAGGGTC
GTCTGTTTCGAGTTTGTCACGTCTGAGACGCTGCCCCTTACTCCTGAATC
GTACAAAGACGACAAATATTCGGCAGTTCGTCTCCAAGTCAGACTGGTAT
CTAGGGGCGCGTGCAACGTGTCCAACTGGTGCTCCACAACCGTCGCCATA
CTTCGCCTGCTGCCAGTGGCTTCTTTGTCCGTTGTTTTTCGCGCGGATAT
GTCCAACCACAGCTGCATTTGTGACTCTTTCGAGAAGTCTTGCTAAACTC
TGGATTCATCAGGACCGATGTAGTGCAGAGGGAGAACCGAAACAGTGCTT
TCTAGACCCCTTTCGCTTCCCCCGTCTGCTGCTACTGCGAACGAGAATCG
TGAAATGTATCATTCGAAGCGAGTGAATCGTTTCGGCATGAACAAGATGC
TCCCGCTAGCACGCCGTTTCTTCCGCGGTTGGTCCACGGTTGATCCCGAC
TTTTCTGAAACTATTGAGGAGACCTGTATCAAGATAGCAGGCATGTGCGC
CCTCTATGAGACGAACAAGTGCACTCATCCCGAAGGTGTGGGTGAAGTCG
CGCTTCTGTGTTTCACCCCAACAACAAAAGACTGTTGGCAGCAGCAACGC
CGACCCTCAACCCCCCGCCGCCGACACGCCCCCATCATTTCTCTCAATCA
AAACCAAACAACACAGGACCCCCCGACGAACTTGGAAACGTACGAGTGGA
CGACCGCGTACTTCGCTGGCTACGCTCTCTTCGCCGGGGGGCTCGGGGTG
GGGTTGACGAACTTGGCGAGCGGGATCTCCGTCGGCGTGGCAGGCAGTGC
CTGCGCCCTCGGCGACGCCCAGGACGCGTCTCTTTTCGTGAAGATCCTCA
TCGTGGAGATCTTTGCGTCTGCACTTGGAATCTTCGGGATCATCGTTGGC
ATCATTCAGTCAAACTCGGCCGAGTTCCCGCAGGTTTAGGTTGATAATCG
GATCAATCACACGAGAGGCGTGGGCACCTACTTCGTTGGCCCTGCAGCGT
CGTCTTTTGCGCGCTGCTGAGGGGTGAGGAGCTTAGGGCGGGAGGACAAC
CCCTGGAGCAGGCGGGGGTCGGGGGTTGGATTGATGCTCGAGTCTCACGG
GATCAATTTTCTCGACGTATCTCCGTGGATTGTCAAATCGTCGGGGAAAG
AACGTGAAGCGAGACCGGGAGCAAGCGTTGGCTGCTTTAGGAAGATCCGA
TCCTTTTTTTTTAAATCATCGCGGAAAGAATGTGAAGCGAGACCGGGAGC
AAGCTTTGGCTGCTTCAAGAGGATCCCTTCCTTTTTTTTTTTGGCGGCGA
TGTGATGTGAAGCAGGAAAAGCCTGAGTGATGCGGCGCCTTTTAACAGGT
AGTCTATCTTTTACGCTTGACCTGTCCGCAGTTGTCGCGAGAGCTCTGTG
TGCGGTGCTGCGTCTGCGTGTACGTGAGCAGCCGATGAAGTAGATATTTC
GCGCTATCCCCCTCTCCCGGATACGTGGCGCGGATGGGACACCGGACGTA
GATGAGCAGGATGACGATGGCGTACGGTTACGGCGAAGAGCAAGCCTAGA
CGTCAAGCGGCCGCGGGATGATCGACAGCTTTCCCGGGCTGCCGGTGCTC
GTTCATTTTGTCGTGGTTGCCTGCTGGTGTCTGTGACCCTCAATCAAGCG
TTGGTCGGCCATTTAACCTGTTGGGTAGCGCCTGCGAGAGTTTTGTCATG
AAACTAATGGACACTAGCCCCACTTGTGTATGGCACAGCGATGCTTGGCT
TCTTTTTTTTTTTGCAGAGATCGTGAGTTACGTGCCAACACGGGGCGGTG
CCGATGAACGGCTCCGTGTTTCATGCACGGCTTCCCGTGATGGTGCTCTG
TCGCGGTAAATTAGTGTGTGTTCAGGTGTTGTCCTACTGTTTTGTTGGCG
GGGGCGGCACGCGCACGTACGTTTCGCGTGATTTAACTCTGGGAACTGTA
CGATCAGAGTTTATGTCGTCGTCTAACTGGCCGCGACGTATTTTTGTTCC
TCCTCGACCTTTTAGGCCCATCATGCCCTTGGTGCGTGGAAAAGGTATCG
GATGTTTTCGATCGTTGATGAATGCAAAATGGTCTCCGTATGCTGCGGTC
AATCGTGTCCGTTGACTCGAAAGATGAAGCAAGTGCTGGTATGCAAGGCC
CTGATCACGCCATCAGTCCGCAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:1989465..1992387+

>mRNA_P-fluviatile_contig13.1825.1 ID=mRNA_P-fluviatile_contig13.1825.1|Name=mRNA_P-fluviatile_contig13.1825.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1128bp|location=Sequence derived from alignment at P-fluviatile_contig13:1989465..1992387+ (Porterinema fluviatile SAG_2381)
ATGACCACATCGCAGGAAGTATTCTGCACGGGGGATTACTGCAATGCCGG
CTGGCCGGAGGTTCTCACGCACATGTCGCCCTACGGTTGGGCGAACATGG
GCATCGCGTTCGCGTTGGGATTGTCTGTGCTCGGGGCGGGTTGGGGCATC
TTCCTCACGGGATCGAGCATCATGGGCGCGGCTATCAAGGCTCCTCGAAT
CCGGTCGAAGAACTTGGTTAGCGTAATTTTCTGCGAGGCGACGGCGATTT
ATGGCGTGATCATGGCGATCATCCTGACCAACAAAATCAATATGACCACA
TCGCAGGAAGTATTCTGCACGGGGGATTACTGCAATGCCGGCTGGCCGGA
GGTTCTCACGCACATGTCGCCCTACGGTTGGGCGAACATGGGCATCGCGT
TCGCGTTGGGATTGTCTGTGCTCGGGGCGGGTTGGGGCATCTTCCTCACG
GGATCGAGCATCATGGGCGCGGCTATCAAGGCTCCTCGAATCCGGTCGAA
GAACTTGGTTAGCGTAATTTTCTGCGAGGCGACGGCGATTTATGGCGTGA
TCATGGCGATCATCCTGACCAACAAAATCAATGACCCCCCGACGAACTTG
GAAACGTACGAGTGGACGACCGCGTACTTCGCTGGCTACGCTCTCTTCGC
CGGGGGGCTCGGGGTGGGGTTGACGAACTTGGCGAGCGGGATCTCCGTCG
GCGTGGCAGGCAGTGCCTGCGCCCTCGGCGACGCCCAGGACGCGTCTCTT
TTCGTGAAGATCCTCATCGTGGAGATCTTTGCGTCTGCACTTGGAATCTT
CGGGATCATCGTTGGCATCATTCAGTCAAACTCGGCCGAGTTCCCGCAGG
TTTAGGACCCCCCGACGAACTTGGAAACGTACGAGTGGACGACCGCGTAC
TTCGCTGGCTACGCTCTCTTCGCCGGGGGGCTCGGGGTGGGGTTGACGAA
CTTGGCGAGCGGGATCTCCGTCGGCGTGGCAGGCAGTGCCTGCGCCCTCG
GCGACGCCCAGGACGCGTCTCTTTTCGTGAAGATCCTCATCGTGGAGATC
TTTGCGTCTGCACTTGGAATCTTCGGGATCATCGTTGGCATCATTCAGTC
AAACTCGGCCGAGTTCCCGCAGGTTTAG
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