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Homology
BLAST of mRNA_P-fluviatile_contig13.1802.1 vs. uniprot
Match: A0A6H5J519_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J519_9PHAE) HSP 1 Score: 624 bits (1609), Expect = 2.120e-206 Identity = 367/610 (60.16%), Postives = 427/610 (70.00%), Query Frame = 1
Query: 91 SSADSADVAGGRGKQWSELCPPATSSSSSTRDE-SWRMVVPGNGL-EDV--HLHPSPPLWEGRPAVSPSPTSPAPLTVNDGSASSGLSGSSRKLPFASGSATGREGGGWQRGXXXXGYTDTLWSPFLPESGLAASIDSVSGGDRWRXXXXXXXXXXXXPQXXXXXXXXXXALQSQRSAIPTQ---VYGLEPPSKLQQQLAALAAGGIDRPALRGQEYRREKRRSGKSAAGPGR-------HRGGSTXXXXXXXXXXSEVDDEDAS----------SRRFFGIRWPPLLPGARRGRSKTADSRDVLGGNRGXXXXXX------RLRVSIEGTEEHGKGIGGYTVFKIQVTDRAIGEQWMVKRRFRQFEDLHRGLLPVLSREPDANAYALPPKEVFGGRHGGVIVKRLKLLTIYLDRLVTCSAAVQHPVMSSFLELDPSVRGLGAYGRYHGPECVLKEGKLRVKVWKGPHKPVINILEAGLHLLGWTSSYAIISPGPVFLVYYGPEDDPDKPVWVLPSRRTVGLQQVRVQRVDMWKADLDKEGLRFFLVSWENTSLLCQVDSEASLDSWARALDESVDLRPQQSKEDRAKVDIELKAKEVWTTREEGLWGGL 1830
+SADSADVAGGR + ++ SS+STRD S RMVVPG GL ED H HPS LWEGR SPSP P S+S+ +SGSSR L SGS+ GGGW G TDT WSP LPES A +D S G+ W Q XXXXXXXX ALQS++ I TQ YG PS+ +QQLAA GIDRPALRGQEYRREKR SA+ R + ++ SE+D + SRRF GIRWP +LPG RR RS T D G RL+VS+EG +E GKG+GG+TV+++QVTDRA+GEQWMV RRFRQFE LHRGLLPVLSREPDANAY LPPKEVFGGRHGGV+ KRLKLL +YLDRLVTCSAA++H +SSFLEL+P++RGLGAYGR+HGPECVLKEG+L V+ WKG +KPVIN ++AGLHLLGW S++AI+SPGPVFLVYYGPEDDP+KP+W LP +RT+G QVRV+RVDM K D++K+G RFFLVSWE+TSLLCQVDSEASLDSWA A+DE+VDLRPQQS+EDRAKVDIELKAKE WTTREEGLWGGL
Sbjct: 33 ASADSADVAGGRAGSRPPVAMASSVSSASTRDGFSSRMVVPGLGLVEDTSHHHHPSRALWEGRATPSPSPXXXXPSAALT-SSSARISGSSRPL-LVSGSSI-EAGGGWVAGGGSA--TDTFWSPVLPESDTAPPMDRGSLGEHWSWL-----------QQXXXXXXXXEALQSEKGVITTQPAFAYGPVSPSQYKQQLAA---AGIDRPALRGQEYRREKRWRWGSASAAARSTAERISNNSNNSHPTSSLMRSGSELDRQXXXXXXXXXXXXXSRRFLGIRWPSMLPGGRRDRSATTGDDDFSTRQGGGGELPVSGGEDARLQVSLEGAQELGKGLGGHTVYRLQVTDRAVGEQWMVLRRFRQFEALHRGLLPVLSREPDANAYVLPPKEVFGGRHGGVVAKRLKLLQVYLDRLVTCSAALEHRALSSFLELEPALRGLGAYGRHHGPECVLKEGRLWVRAWKGAYKPVINFVDAGLHLLGWISAHAIVSPGPVFLVYYGPEDDPEKPLWALPDKRTIG-SQVRVRRVDMRKTDVEKDGNRFFLVSWEDTSLLCQVDSEASLDSWAHAIDETVDLRPQQSEEDRAKVDIELKAKEAWTTREEGLWGGL 622
BLAST of mRNA_P-fluviatile_contig13.1802.1 vs. uniprot
Match: D8LRJ3_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ3_ECTSI) HSP 1 Score: 392 bits (1006), Expect = 1.700e-121 Identity = 200/322 (62.11%), Postives = 234/322 (72.67%), Query Frame = 1
Query: 817 SEVDDEDASSRRFFGIRWPPLLPGARRGRSKTADSRDV-------------------LGGNRGXXXXXX----RLRVSIEGTEEHGKGIGGYTVFKIQVTDRAIGEQWMVKRRFRQFEDLHRGLLPVLSREPDANAYALPPKEVFGGRHGGVIVKRLKLLTIYLDRLVTCSAAVQHPVMSSFLELDPSVRGLGAYGRYHGPECVLKEGKLRVKVWKGPHKPVINILEAGLHLLGWT---------------------SSYAIISPGPVFLVYYGPEDDPDKPVWVLPSRRTVGLQQVRVQRVDMWKADLDKEGLRFFLVSWE 1650
S + +SRRF GIRWP LLPG RRGRS T D+ D+ GG G RL+VS+EG +E GKG+GG+TV+ IQVTDRAIGEQWMV RRFRQFE LHRGLLPVLSREPDANAY LPPKEVFGGRHGGVI KRLKLL +YLDRLVTCSAA++H +SSFLEL+P++RGLGAYGR+HGPECVLKEG+L V+ WKG +KPVIN ++AGLHLLGWT S+YAI+SPGPVFLVYYGPEDDP+KP+W LP +RT+G QVRV+RVDM K D +K+G RFFLV ++
Sbjct: 15 STTEYTTTTSRRFLGIRWPSLLPGVRRGRSATTDTHDMPSDGYYGDGGVGDDHFSTRQGGGGGELPVSGEEDARLQVSLEGAQELGKGLGGHTVYSIQVTDRAIGEQWMVLRRFRQFEALHRGLLPVLSREPDANAYVLPPKEVFGGRHGGVIAKRLKLLKVYLDRLVTCSAALEHRALSSFLELEPALRGLGAYGRHHGPECVLKEGRLWVRAWKGAYKPVINFVDAGLHLLGWTRRASAELVRLGLTSEAWLSRVSAYAIVSPGPVFLVYYGPEDDPEKPLWTLPDKRTIG-SQVRVRRVDMRKTDFEKDGNRFFLVRFD 335
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Mammalia |
| Seed ortholog score | 65.9 |
| Seed ortholog evalue | 6.9e-08 |
| Seed eggNOG ortholog | 61853.ENSNLEP00000008705 |
| Preferred name | NISCH |
| GOs | GO:0003008,GO:0003013,GO:0003674,GO:0005102,GO:0005178,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006810,GO:0006996,GO:0007010,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0008015,GO:0008150,GO:0008152,GO:0008217,GO:0009987,GO:0010646,GO:0012505,GO:0015844,GO:0015850,GO:0015874,GO:0016020,GO:0016043,GO:0016601,GO:0019318,GO:0023051,GO:0023052,GO:0030029,GO:0030036,GO:0030334,GO:0030336,GO:0031410,GO:0031982,GO:0032228,GO:0032501,GO:0032879,GO:0032940,GO:0035556,GO:0040012,GO:0040013,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046903,GO:0048243,GO:0048519,GO:0048523,GO:0050432,GO:0050789,GO:0050794,GO:0050804,GO:0050839,GO:0050896,GO:0051179,GO:0051234,GO:0051270,GO:0051271,GO:0051716,GO:0051937,GO:0055037,GO:0065007,GO:0065008,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097708,GO:0099177,GO:2000145,GO:2000146 |
| EggNOG free text desc. | Nischarin |
| EggNOG OGs | 35MHN@314146,38VEQ@33154,3BG3G@33208,3CW3X@33213,3J4M5@40674,48A8J@7711,495NR@7742,4MHR3@9443,KOG1259@2759,KOG1859@1 |
| COG Functional cat. | TZ |
| Best tax level | Primates |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Phox homologous domain |
| Ec32 ortholog | Ec-12_000010.1 |
| Exons | 9 |
| Model size | 3996 |
| Cds size | 1635 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815564.8590956-UTR-P-fluviatile_contig13:1776066..1776217 | 1622815564.8590956-UTR-P-fluviatile_contig13:1776066..1776217 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 1776067..1776217 + |
| 1693562266.1265974-UTR-P-fluviatile_contig13:1776066..1776217 | 1693562266.1265974-UTR-P-fluviatile_contig13:1776066..1776217 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 1776067..1776217 + |
| 1622815564.8725684-UTR-P-fluviatile_contig13:1776929..1776976 | 1622815564.8725684-UTR-P-fluviatile_contig13:1776929..1776976 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 1776930..1776976 + |
| 1693562266.1358263-UTR-P-fluviatile_contig13:1776929..1776976 | 1693562266.1358263-UTR-P-fluviatile_contig13:1776929..1776976 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 1776930..1776976 + |
| 1622815564.9898078-UTR-P-fluviatile_contig13:1783111..1785274 | 1622815564.9898078-UTR-P-fluviatile_contig13:1783111..1785274 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 1783112..1785274 + |
| 1693562266.2061582-UTR-P-fluviatile_contig13:1783111..1785274 | 1693562266.2061582-UTR-P-fluviatile_contig13:1783111..1785274 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 1783112..1785274 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815564.882544-CDS-P-fluviatile_contig13:1776976..1777819 | 1622815564.882544-CDS-P-fluviatile_contig13:1776976..1777819 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1776977..1777819 + |
| 1693562266.1432438-CDS-P-fluviatile_contig13:1776976..1777819 | 1693562266.1432438-CDS-P-fluviatile_contig13:1776976..1777819 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1776977..1777819 + |
| 1622815564.8926146-CDS-P-fluviatile_contig13:1778336..1778471 | 1622815564.8926146-CDS-P-fluviatile_contig13:1778336..1778471 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1778337..1778471 + |
| 1693562266.1507034-CDS-P-fluviatile_contig13:1778336..1778471 | 1693562266.1507034-CDS-P-fluviatile_contig13:1778336..1778471 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1778337..1778471 + |
| 1622815564.9034216-CDS-P-fluviatile_contig13:1778709..1778792 | 1622815564.9034216-CDS-P-fluviatile_contig13:1778709..1778792 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1778710..1778792 + |
| 1693562266.1576977-CDS-P-fluviatile_contig13:1778709..1778792 | 1693562266.1576977-CDS-P-fluviatile_contig13:1778709..1778792 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1778710..1778792 + |
| 1622815564.9137156-CDS-P-fluviatile_contig13:1779404..1779510 | 1622815564.9137156-CDS-P-fluviatile_contig13:1779404..1779510 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1779405..1779510 + |
| 1693562266.1650002-CDS-P-fluviatile_contig13:1779404..1779510 | 1693562266.1650002-CDS-P-fluviatile_contig13:1779404..1779510 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1779405..1779510 + |
| 1622815564.9279873-CDS-P-fluviatile_contig13:1780005..1780097 | 1622815564.9279873-CDS-P-fluviatile_contig13:1780005..1780097 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1780006..1780097 + |
| 1693562266.175144-CDS-P-fluviatile_contig13:1780005..1780097 | 1693562266.175144-CDS-P-fluviatile_contig13:1780005..1780097 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1780006..1780097 + |
| 1622815564.9401917-CDS-P-fluviatile_contig13:1780344..1780456 | 1622815564.9401917-CDS-P-fluviatile_contig13:1780344..1780456 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1780345..1780456 + |
| 1693562266.182673-CDS-P-fluviatile_contig13:1780344..1780456 | 1693562266.182673-CDS-P-fluviatile_contig13:1780344..1780456 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1780345..1780456 + |
| 1622815564.9521246-CDS-P-fluviatile_contig13:1782562..1782636 | 1622815564.9521246-CDS-P-fluviatile_contig13:1782562..1782636 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1782563..1782636 + |
| 1693562266.1904085-CDS-P-fluviatile_contig13:1782562..1782636 | 1693562266.1904085-CDS-P-fluviatile_contig13:1782562..1782636 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1782563..1782636 + |
| 1622815564.9697092-CDS-P-fluviatile_contig13:1782921..1783111 | 1622815564.9697092-CDS-P-fluviatile_contig13:1782921..1783111 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1782922..1783111 + |
| 1693562266.1981819-CDS-P-fluviatile_contig13:1782921..1783111 | 1693562266.1981819-CDS-P-fluviatile_contig13:1782921..1783111 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 1782922..1783111 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1802.1 >prot_P-fluviatile_contig13.1802.1 ID=prot_P-fluviatile_contig13.1802.1|Name=mRNA_P-fluviatile_contig13.1802.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=545bp
MVVPGNGLEDVHLHPSPPLWEGRPAVSPSPTSPAPLTVNDGSASSGLSGS SRKLPFASGSATGREGGGWQRGGGGGGYTDTLWSPFLPESGLAASIDSVS GGDRWRWQQQQQQQQQEQPQRWRREQEQQQALQSQRSAIPTQVYGLEPPS KLQQQLAALAAGGIDRPALRGQEYRREKRRSGKSAAGPGRHRGGSTPSSS SLMTSGSEVDDEDASSRRFFGIRWPPLLPGARRGRSKTADSRDVLGGNRG GGGGGGRLRVSIEGTEEHGKGIGGYTVFKIQVTDRAIGEQWMVKRRFRQF EDLHRGLLPVLSREPDANAYALPPKEVFGGRHGGVIVKRLKLLTIYLDRL VTCSAAVQHPVMSSFLELDPSVRGLGAYGRYHGPECVLKEGKLRVKVWKG PHKPVINILEAGLHLLGWTSSYAIISPGPVFLVYYGPEDDPDKPVWVLPS RRTVGLQQVRVQRVDMWKADLDKEGLRFFLVSWENTSLLCQVDSEASLDS WARALDESVDLRPQQSKEDRAKVDIELKAKEVWTTREEGLWGGL* back to topmRNA from alignment at P-fluviatile_contig13:1776067..1785274+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig13.1802.1 ID=mRNA_P-fluviatile_contig13.1802.1|Name=mRNA_P-fluviatile_contig13.1802.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9208bp|location=Sequence derived from alignment at P-fluviatile_contig13:1776067..1785274+ (Porterinema fluviatile SAG_2381) ACCCGAACAACAACAGCGGCGCGGGCGGCACTAGGTCTTCCCCCCTCCCC
CGGCGGCCCCGGCGACAGAGATCTGGGTGTCTCTGTAGCTTCCAGCGCCG
ACAGTGCTGATGTCGCGGGTGGTCGTGGTAAGCAATGGTCTGAACTTTGC
CGTGGAGTGCTAGAAGGCCACGAGCATACCTGTGGGAGCGCTGTTGCAAA
CTCATACACACGCGGCATGCACATTTTACCCGTCCGAATGGTACGTGTAA
CTGCCGCCCCCGCGTCTCGATACGCACCAACATCACACTCCTGCAATGAC
TGGGTACAGCCGGCCTCCGTTTCATTCCCCTCTTTGTCAAACTCTTGTAT
CTTGCTGAGACAGTACAGGTTTAAGAATTTAGAACTCCGGAGAGCGTTGA
AGCTTTAGTTAACTGAATGTCGCACATCGTCATCATCTCGTGGGACAGGG
CCCCACTATACGTAACACACGATAGTGTCCACAACAGCATTTACGGGCCT
GGGATTGGCTTGGTCGAAAACAATTGTCATCTCAAATCATTGCGGATAGA
TCATGCAGCGGAGACGAGATTTGAGTTTATTCTGCCAGCCGCCGTTTACT
TTCTAGCTTTTCCGAGCGAAGCGCGCAGACGCAAAGGCAGCCTGGACCCA
ACCTCCAAGCTGGCTCAACAACATGCGGCAATCATCGAACCTTCCAATCT
AGTGCCCCGAAACATCGGCTTAGTCTGCACGAGCAAGTCTAATGGCACAC
TGTCGGTAGCCGACGCATGCCTTTGTCCCTCTCCTCGAACCAAGCTTGCG
TTCACGACCCGCTTCAACTCAACAACACTGCCGGTCCCAACCGCTTGACG
GCAGGCTCACGAGCACCTGCGACGTCTTCGTCGTCATCGACAAGGGACGA
GTCTTGGAGGATGGTTGTGCCTGGAAACGGCCTTGAGGATGTCCACCTTC
ACCCGTCTCCACCTTTGTGGGAAGGGCGACCAGCCGTGTCTCCGTCCCCT
ACCTCGCCTGCGCCTCTGACGGTCAACGACGGCAGTGCCAGCAGCGGACT
CAGCGGCAGCAGCAGGAAGCTCCCGTTTGCAAGCGGAAGCGCGACCGGTA
GAGAAGGGGGCGGATGGCAGCGCGGCGGCGGCGGCGGCGGGTACACGGAC
ACGTTGTGGTCCCCCTTTCTGCCCGAAAGCGGGCTTGCTGCGTCGATTGA
TAGCGTCAGTGGGGGCGACCGCTGGAGGTGGCAGCAGCAGCAGCAGCAGC
AGCAGCAAGAGCAGCCGCAGCGCTGGCGGCGGGAACAGGAACAACAACAG
GCGCTGCAGTCCCAGCGCTCCGCAATCCCGACCCAGGTCTACGGGTTGGA
ACCGCCTTCTAAGCTTCAGCAGCAGCTCGCGGCGTTGGCGGCGGGAGGAA
TAGACCGTCCCGCGCTTCGGGGCCAGGAGTACCGACGAGAAAAGAGGCGG
AGTGGCAAATCGGCAGCTGGCCCAGGGAGACATCGTGGCGGCAGCACCCC
CTCGTCATCCTCTCTGATGACAAGCGGCTCCGAAGTCGACGATGAAGATG
CCAGCTCGAGGCGTTTTTTCGGTATCCGGTGGCCCCCCCTGCTGCCAGGA
GCAAGGCGAGGCCGATCGAAGACGGCAGACTCCCGCGATGTTTTGGGCGG
TAACCGCGGTGGTGGTGGCGGCGGCGGACGGCTAAGGGTGTCAATCGAGG
GAACCGAAGAGCACGGCAAGGGAATAGGGGGCTACACCGTTTTCAAAATA
CAGGTGCGGCTCCGGAAGCAGGTCAAGCGAAACATCGAGGCAAGCGGGTT
TCGATGATATTTAGCCGGCGTGGAGGAGGTGGGGCGGGAGGACAGGATTG
CCTCATATTTTCTAAACCGCTCATGAAAAATCACTCGGTTATTCGTCAGC
TCGAGGAACCCCCTGAACAGCAGCTTATGCCCGACACCTGTTTCTTGGAT
GACGGGCGCTTGCTGGGTGCACGACTCGATCTCTTGCAAGGGCCACTAGC
AACTGTAGCGCCCACCATCGGTTGGTTCGTTGTTTGGGTTAGAGAAAGAC
CCTCTCTTTTCGAAAGTTGACCTTGAGCGTCAAGAAATGCACTATCCGGC
CAGTCAGCAGGCGCTGCTCAGAGGGGGTTTCAAGAGTGCACTCCCACCCG
TCCCACCAGTGGTGGAACCTCCTCATGTACACGCTGAGCCAGAGCGACCG
TCACTGCCAGTGGCATCGCGATTTTTCGGCTCCGGCTCAGCTCTCGTTGC
TGTTGCTCGTTCCGTTTTAGGTGACGGATCGGGCAATCGGGGAGCAGTGG
ATGGTCAAGAGAAGATTTAGGCAGTTCGAGGACCTGCACCGAGGATTACT
GCCTGTGCTGTCCAGGGAGCCGGACGCAAACGCCTATGCGTTGCCCCCGA
AGGAGGTGTGGTGTGTGTACCGCAGCTTCCAGCTCTCGTCGCCCGATATT
TCTCCCAGTGGTGTTGATCGATAGCATGCGGCGCTGAGTCACTTGAGCGG
ACAGTAGTGTTGGGTTGCTGTTTTTATTGCGCTCGTTCTGGCTCAGCGCT
TGCGGCGTATTTCTCATCCTCTTCGTCTCGATTACGGGACCCTCGCGACC
TTCGGGCTATGCACTCTCCGTCGGCGCTACTGGCGACAAACAGGTGTTCG
GGGGAAGGCACGGAGGGGTGATCGTGAAGCGCCTGAAGCTGCTCACGATC
TACCTTGACCGTCTCGTCACGTGCAGGTGATGAAACGATCCGGCCATGCC
TCGGCACCTGCATGCAACAGCAAATGATCTTTGCGCACGTAGTCGAAGCT
GGACTGTGTGTTTTTATGGACTGCTCTAGGCCTTCACCGGAGCTGCCTTT
GCGCACGCAACTTTTGTTCGCTTCGTCAAATGTGACAGACCTTCACGCTC
GGCAGCACCGCTGCATCTGGCGGACGTCATGTTGGCACAGCAGACGAAAG
CAATCATTTATGTTGTGCTTATGCAAGCGTTATGCCTTACACCGCAGGTG
TGTTCAACTGGTTTAACGGTTTACACAACAGCGCTTCCTGCGTTGCTGCT
GTGAACGTGGCGTGTTGTCATGATAACTTTGATTCCTGGCGCTGGCGTGT
GCAGAGAAATCGACCGCGCGGAAGCATGCAGACGTTTTATCAAGCTGCCG
CACGTTTCCATTGCCAAGCAGTATCAGATTTCTCCTCCTATTTTTTTTGT
TTCGCGCGTCATGTTGCTTTAGCCCGCGCCTGCTCCAATCTTATCCGCAC
GGTTGCGGGAAACGCCAACGCGATGCACCGTCATATATATTCGCACCGCT
GCGTTCTTGTCAACTGTCGGTGGATCGGGCGATCCCAGTGCTGCCGTGCA
ACATCCTGTGATGTCATCGTTCTTGGAGCTCGACCCTTCGGTGCGAGGCC
TCGGCGCTTACGGCCGATACCACGGCCCGGAGTGTGTCCTCAAGGTGATA
CTCAGGTTTCGCCGATTTTTTCTGCTTGGCTACTATCCCCTCTAGGCGCC
CAAAGGCAGGCGCAGCAGCCACATGCCGGCCGCGCGACGTACGGGCTTCG
TATCTGTGCTCCTTGCTGTGTTTTCTTCCCAGCGTTTGCAGATCTGCCTG
TCTGTCTGCCTGTATGGTTTACCTGTTTTGTTGAGTTCATTCGAGTGTCT
CTGGTGCGCAAGTATCTTTCTTAGCCCTTTCCTCCTAGCGTCGTCCCTAT
TCCGTGGTTGGATCAGCCGGTTCTTGCGCTTCCGCTCCTTTTTTAATCTC
CTGGTGTACTTAATGTTTGTTGGCACCATCTGTCGTCCGCGCTCTTTAAA
CATGACGGCTTCGCCCAACTCCAGCCGGCTCATCCCGGGCTGTAGTGACC
TTTTTGATCGACTCGATTGACGGCGGCCCAAGCAATCGCCCTTTGCGGCA
CTTGTGTTCCTTTTGTTGGTCCCTTTTTGTCTGTGTCAGGAGGGCAAGCT
TAGAGTGAAGGTGTGGAAGGGACCGCACAAACCAGTCATCAACATTTTGG
AGGCGGGCTTGCACCTGCTGGGTTGGACCAGGTACGACACAGGCTATGAT
TAGAAACCTATGTGTCGTAGGTTACTGATGGGTGTTTATGTGTTTTCGTG
AAAAGGGGGCACCAGTTCAAACGCGTCTAACATCAACCTGGCCGCTTGAA
AGGTGCTCACGTAGTTCAGGGATGAGGTGTTCCGCCCTCCTTAACCATAC
CATCTCCGATGCCCCCCTCTACCCCTCCCCTCCCGATCTCCCCGCCACGC
ATCTGGCTACCGCGCGGCTTTGGTGCAGTTCGTACGCGATTATATCGCCG
GGGCCGGTGTTTTTGGTTTACTATGGCCCGGAGGACGACCCGGACAAGCC
CGTGTGGGTTTTGCCTTCCAGAAGGACTGTCGGCTTGCAGGTAAAGATAA
TCAAAGTGAATTCTGGAGGAGGTAGTCGCTACCGCTCGAAAAGGGCGGGC
GAACGGGGGGAAGAAAAAAGGCAGGGACGGAGGCAGGGTTGAATATGGTG
GAGAGGAATGCCAGGGCGAGGGGGCGGGGGGGGGCGTACTCATGTTTTGC
ATGCCTTAGTTGTTAGACCATTGACCACGCGTCCTCGAGAGGACGGAGCA
TTGTTCCCGCAGGATCGAGACCACCGATGGCCAATCGTTTCTTCCTACTT
TGCCAAAGGTGGCTCAAAAATGTTTTCCCTAACCTGTCTACTTTATACCT
GTCCTTCCTGGGCCACATCTTACACCCGAGTACCGCTACCGTCTTCTCCT
CTTTGTTCCATGCCTCAAACTTCTCTCTATACCGACTGTCTACTTTTTCC
AGCTCAACCATGTACCCTTCTCTCTCCTGATCGTACAACGGGCATTCCGC
AACTACATGTACCCGGTCTTCGCATTCGGCGCCGCAGTCACATTTGAACT
TGTCTTCGTCGTCGTCTACCTTCCTACACCTCCTTCCACGTTCCCGTAGG
TCAATGTCGCCCGTTCTAAATTTGACCTTCCTCTTTGTCCCTTCATCCAT
TGGTCCTTTCAGGTACTCCTTGAACCCTATTCCTTCGTTCAGCCTTCCGT
ACACTTTTAGAACCTCCTTTTCCTTGGTCTCTTTCCGCAAGCTCTGGTCT
TCTCTATTTTCAAAGGCTTCTGAGATGTTCTTCTTGTGCCCTTCTAAGCT
TTCCGCTCCCGTCGTCTCCCGTTCGTCAAAATCTAACCCACTCCGCACTC
CCTGTACAACCTTAGCCCACTCAATGGGTTGTCTACCCTTGGCCTTGTTT
ACCCACCTCGCCTCCCAAGCTATTCTCGGTAACCTCTCCGTTCCCATGTT
TTCCATACGGTATTGCCATGTCAACTTCCTCCTGTCTCTTCCCGTTCTTA
AGGAGTAGATCCCCAACTCTGCTCTTACTGCTGCGTTACTTGTGCGCTGG
GAGCATCCTAGAATGATCTTCGCTGCTTTCATCTGCGCTACCTCCAACTC
TGCTACTATTTTCTTGTTCCCTTCCCAAACTTCTCCCGCGTACTCTAGTG
GCGGGATGATAACACTTTTAAGAATGGTCATTTTGACGCGTGTATCAAGG
TGCCGGTCTGCTAGGATTGGGTGCAACTTCCCTGCCCTTGCTTTGCCCTT
GTCCGCTATTTTGTGCATGTGTGCATCCCATTTACAGTCTTTTGCTATCT
CTACTCCAAGGTATATGCATTTTTCCACTCTTGGCAGCTCCTTGTCCCCC
CATGTCCACTTGGTACCTACTTCCTCTTCACCATCTTCATTGCACCCCAT
TACGGCACACTTTGGGACGTTGGCCGAGAATCTCCACTTATCAGCGTAGG
TCTTCGCTACGTTAATCTGTAGTTGGAGCCCCTCAGGCGTGTCCGACGGG
GCGGCGGCGGGGGCGTTCTCGGCGGGGGGAGATTACGAGATTGCAGTAGG
TGTCATCGCCTTGGTTCACATTCGTCCGCTTTCGGTTGAGGCAATGAAGT
CTCTGGTCTTCGATGGTACCTACGATGCTCACGTGGTGTGCATCAGCTTT
TGGACTTCGCACAAGCGAGAGGACGGCCGGCGGGCTGCTTCCGATGGCAG
GACGACGGTCACATTTCGTCCTGGTGGCGCGAAGGAGCTCGTTTATTTCT
CTTGGCTGGAAGTCCAATTCGCTATTCGTCAGCGTCTTCTAATAGTCCTA
ACCTGCACACGCACGGAAGATTGACCCACATGAACAAAAACAAACGCTAC
CGAAAAAAACGGTCCTGCAAGCACATTGACAACGAGGAGCCGTAGATGGA
CACCGAGCAACAGAGCACATGTATCTTCACCCGACCCAGGCTTGCCCTTC
CGATGACTTTGCCGGTCTTTCGTCCTCCGCTCGCCGCTCGCCGGTTGTGG
TTTGAATCTCTCCCCGCTCTGCCGTCGCCTGTACGCGGTACAGACGCCAC
GTGCACTTGCCCGCACTGATTTCGCTGCGCTTCGTTTGTGTCGAACGTTG
CTTCCGAACGCGCCGCGCCACCCGGCCCTTTTGTTGCTCTTGTTAGCAGG
TGCGCGTTCAGCGTGTAGACATGTGGAAAGCAGATCTAGACAAAGAGGGG
CTTCGATTCTTTCTTGTTAGGTGAGTGTGTGTGTGAGAGAGAGAGCACGG
CGCGTGCGCCCAGGTGGACGATGCGGATTAACGTTATGTATGACCTCCGG
TTTGGGATATACACCACACAGCAGCAGCTGTCGGCACCCCCCCCCCTGTG
CGAAACGCCCGCCCTTACAGGGAGAGAGCAAGCTAGAGAGCCGAGAGTAA
CAAAATAAGCAATCGATGGGTTCAAAAGCTCCAGATAGCAGTGAGAGTTC
CCGACCGTTGCCTCCCCCCACCCTCGCGCATTGGTCACGTCTCCACATGT
TCTAGCTGGGAGAACACCTCCCTTCTGTGCCAGGTCGACTCCGAGGCATC
TCTTGACAGCTGGGCACGTGCTCTCGATGAGAGCGTAGATCTTCGGCCGC
AGCAATCCAAGGAGGACAGGGCGAAGGTTGACATCGAGTTGAAGGCGAAG
GAGGTCTGGACCACGAGGGAAGAGGGCTTGTGGGGCGGGCTATGATGGTC
GTGGCCGTCAAGGGCTTGCTGAAGCAAATTGTGTTCGCGAACCACCCCTA
TTGGAGCTGTGGTGGGGTCTTGCCATGTCGCAGGGCCCTGCGGATGGGGT
AATTGCAGGTGATGTGGGAGGACGGACGCCCTTGACAGGGCTCGAGATAA
ATCTCAATCCGCGCGTTACGTCGTGTGCGATTTTTACGTCGTGTGCTGTT
GCCGGACTCACGGGCCTCGCGCCGGTGTTGCTGTCGTTTTTGCCTTTCTC
TTGCAAAGAATGCTCATCGTACGTTCTCGTTGTTGCACTTCCATGTCGCA
GAAATCCAAAGTAGGGTTGTTTCTAGAGCATGGCTTAATACTTCGTTACA
TTTTACGATTTTTTCCGCCGCTGTCGCTCCTGTCGTGTACACGCGTCGAT
ATGTGCCAACAATCTCTACATTTATGACTTATTTTTCCGAAGGAAGTGTT
TTATGTGAAAGTCATGTGAGGTTTCAGCGGCAGGCGTTTTTGCGGACGGT
GCTGCACTCCCCGCAGTGTTGTCTCAACAAGTCGTGGCGATTTTAATTTT
TTAAAGGTGGTTGATGCCTGAGGTGGAGGGGCCCCTCTGGCTTGTGATAC
GTAGAAAACATAACATGAGGATGCAGCACGGGGTAGAAGGCGTCGATTTG
GTAGCCACGCCACTGCGTAGGTGTGTGTCCCGCCCCCCAGAGCGTGGTGT
ATTGTAGCTGTGGTGGCAGCGGGCCAAAGCTGGGCCTGAAGCACACACCT
CTTGTTGTCGAGAAACCCCGCGCGCACGCCCCGCTGGGTAGGATTTGCTG
TGGCATTCACGTTCTCCCTGGTTTGTCTGCCTATGTATTTTGGAGATACC
CTGCTCGGTTCGAGTAAGCATGGATCGATTGCGTGCTCGAGACCTTCGCA
GTGGGTCGGCGTGTCAAAGGAGCAGGTCAGTAGCAAGAGCTTGCTTGGCC
GCTACCGCGCCGCTTCCGAGCCTTCAAGTAGTTTACACCGTTGAGGCTAC
GTTCGTCGCGCTTCAACTGGAAGCATGTGTAACGTATGCCTCACTGGCTT
GCGACAATGCTGGCAGTCGCATCGGGGACGTGCGGGGCGCTTGCCAGAGC
GCTATTAATATGTTGCTGTACATGGCAAGCGCCCCGAACGTGCCCGTTGC
TACGCCCCGGGACGCTGCAAGCCATTGGGGCACACATACGTATGCTTCCA
GAGGTCGCGCGGCTGCCGTAGCCTCAACTACGGCGGTGGCTATGGTGGTA
AGCGCCACAAGAAGTCCCCTAAGGACGAAGATGCTAGGGTGGCCCTACTG
TAATTAGCGCTTGCGTGTACGCCGGCGGCGAGACAGATCTATCTCGTCCA
TAGCATCCGAGCAAGGTGGAGGAGCTTTCCTTGACCAACCCGGGGCGTTG
CAGTGTTTGCTGTTGAAGCAACAGATTTTGTCGTGGCTGTTGTAGCTTGT
GCCCAGTCGGAGCATCCTTAAGAGTTTCTCGTATGCCGTCGGCGGACCTA
CGGTGTTTCAGATAGAGGAACGATGGTTGGCTCTACCGGCGGGGGTCGAG
TTGTGTCAAAATGGAAGTAGGAAAAGGCCTATCTCCGTCGGCCCCTCAGA
CGATTGGTTGATGTTTGCATGGCGTCTTCTATTATGTCAGTATATCCCGC
CTTGTAGTAGTGTCCCGCCACGCCAGTGAGAGGGGGCGATGTCTGGGTCG
TTATTTGTTCGCAGCAAGGATGTGAAAATCTGCCGCTGATGTCGTGCGGG
AAGCACGCAACACCTTATTAAGCGCCAGGACGATAAAAGTTATTTAGACG
TTGTTGGTAGAAGTCACAAGGACTCAAGGGAATTCGCGCCTTCGGAAACG
CGGACCGTGATTCTGTTGATAGGATTCAAGTGATAGGAGAGCCAAGGGCT
CAAGGACATGTGCGTCGCCAAAAGTGGACTCGGACCATGAATCTAAGTGT
CATGCACCCCCTTTCATACGCCCTTAGCTGATCCCCTCCGCCGACGGCCA
CGGTGATTTTTACGCCTACGCGATCGTCTCTAGTCGCGTCCGGTGTATCG
ACAACAAATTCAGAGCGTTTGGAGGGTGGCGGATTGTGGTCGCGATTGGG
TGGTGATCACCCCAAGGCCGGCCGCTTCTAGAGGCTGCACCCTTGAGCGT
TGGTGACC back to topCoding sequence (CDS) from alignment at P-fluviatile_contig13:1776067..1785274+ >mRNA_P-fluviatile_contig13.1802.1 ID=mRNA_P-fluviatile_contig13.1802.1|Name=mRNA_P-fluviatile_contig13.1802.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3270bp|location=Sequence derived from alignment at P-fluviatile_contig13:1776067..1785274+ (Porterinema fluviatile SAG_2381) ATGGTTGTGCCTGGAAACGGCCTTGAGGATGTCCACCTTCACCCGTCTCC ACCTTTGTGGGAAGGGCGACCAGCCGTGTCTCCGTCCCCTACCTCGCCTG CGCCTCTGACGGTCAACGACGGCAGTGCCAGCAGCGGACTCAGCGGCAGC AGCAGGAAGCTCCCGTTTGCAAGCGGAAGCGCGACCGGTAGAGAAGGGGG CGGATGGCAGCGCGGCGGCGGCGGCGGCGGGTACACGGACACGTTGTGGT CCCCCTTTCTGCCCGAAAGCGGGCTTGCTGCGTCGATTGATAGCGTCAGT GGGGGCGACCGCTGGAGGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAAGA GCAGCCGCAGCGCTGGCGGCGGGAACAGGAACAACAACAGGCGCTGCAGT CCCAGCGCTCCGCAATCCCGACCCAGGTCTACGGGTTGGAACCGCCTTCT AAGCTTCAGCAGCAGCTCGCGGCGTTGGCGGCGGGAGGAATAGACCGTCC CGCGCTTCGGGGCCAGGAGTACCGACGAGAAAAGAGGCGGAGTGGCAAAT CGGCAGCTGGCCCAGGGAGACATCGTGGCGGCAGCACCCCCTCGTCATCC TCTCTGATGACAAGCGGCTCCGAAGTCGACGATGAAGATGCCAGCTCGAG GCGTTTTTTCGGTATCCGGTGGCCCCCCCTGCTGCCAGGAGCAAGGCGAG GCCGATCGAAGACGGCAGACTCCCGCGATGTTTTGGGCGGTAACCGCGGT GGTGGTGGCGGCGGCGGACGGCTAAGGGTGTCAATCGAGGGAACCGAAGA GCACGGCAAGGGAATAGGGGGCTACACCGTTTTCAAAATACAGATGGTTG TGCCTGGAAACGGCCTTGAGGATGTCCACCTTCACCCGTCTCCACCTTTG TGGGAAGGGCGACCAGCCGTGTCTCCGTCCCCTACCTCGCCTGCGCCTCT GACGGTCAACGACGGCAGTGCCAGCAGCGGACTCAGCGGCAGCAGCAGGA AGCTCCCGTTTGCAAGCGGAAGCGCGACCGGTAGAGAAGGGGGCGGATGG CAGCGCGGCGGCGGCGGCGGCGGGTACACGGACACGTTGTGGTCCCCCTT TCTGCCCGAAAGCGGGCTTGCTGCGTCGATTGATAGCGTCAGTGGGGGCG ACCGCTGGAGGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAAGAGCAGCCG CAGCGCTGGCGGCGGGAACAGGAACAACAACAGGCGCTGCAGTCCCAGCG CTCCGCAATCCCGACCCAGGTCTACGGGTTGGAACCGCCTTCTAAGCTTC AGCAGCAGCTCGCGGCGTTGGCGGCGGGAGGAATAGACCGTCCCGCGCTT CGGGGCCAGGAGTACCGACGAGAAAAGAGGCGGAGTGGCAAATCGGCAGC TGGCCCAGGGAGACATCGTGGCGGCAGCACCCCCTCGTCATCCTCTCTGA TGACAAGCGGCTCCGAAGTCGACGATGAAGATGCCAGCTCGAGGCGTTTT TTCGGTATCCGGTGGCCCCCCCTGCTGCCAGGAGCAAGGCGAGGCCGATC GAAGACGGCAGACTCCCGCGATGTTTTGGGCGGTAACCGCGGTGGTGGTG GCGGCGGCGGACGGCTAAGGGTGTCAATCGAGGGAACCGAAGAGCACGGC AAGGGAATAGGGGGCTACACCGTTTTCAAAATACAGGTGACGGATCGGGC AATCGGGGAGCAGTGGATGGTCAAGAGAAGATTTAGGCAGTTCGAGGACC TGCACCGAGGATTACTGCCTGTGCTGTCCAGGGAGCCGGACGCAAACGCC TATGCGTTGCCCCCGAAGGAGGTGACGGATCGGGCAATCGGGGAGCAGTG GATGGTCAAGAGAAGATTTAGGCAGTTCGAGGACCTGCACCGAGGATTAC TGCCTGTGCTGTCCAGGGAGCCGGACGCAAACGCCTATGCGTTGCCCCCG AAGGAGGTGTTCGGGGGAAGGCACGGAGGGGTGATCGTGAAGCGCCTGAA GCTGCTCACGATCTACCTTGACCGTCTCGTCACGTGCAGGTGTTCGGGGG AAGGCACGGAGGGGTGATCGTGAAGCGCCTGAAGCTGCTCACGATCTACC TTGACCGTCTCGTCACGTGCAGTGCTGCCGTGCAACATCCTGTGATGTCA TCGTTCTTGGAGCTCGACCCTTCGGTGCGAGGCCTCGGCGCTTACGGCCG ATACCACGGCCCGGAGTGTGTCCTCAAGTGCTGCCGTGCAACATCCTGTG ATGTCATCGTTCTTGGAGCTCGACCCTTCGGTGCGAGGCCTCGGCGCTTA CGGCCGATACCACGGCCCGGAGTGTGTCCTCAAGGAGGGCAAGCTTAGAG TGAAGGTGTGGAAGGGACCGCACAAACCAGTCATCAACATTTTGGAGGCG GGCTTGCACCTGCTGGGTTGGACCAGGAGGGCAAGCTTAGAGTGAAGGTG TGGAAGGGACCGCACAAACCAGTCATCAACATTTTGGAGGCGGGCTTGCA CCTGCTGGGTTGGACCAGTTCGTACGCGATTATATCGCCGGGGCCGGTGT TTTTGGTTTACTATGGCCCGGAGGACGACCCGGACAAGCCCGTGTGGGTT TTGCCTTCCAGAAGGACTGTCGGCTTGCAGTTCGTACGCGATTATATCGC CGGGGCCGGTGTTTTTGGTTTACTATGGCCCGGAGGACGACCCGGACAAG CCCGTGTGGGTTTTGCCTTCCAGAAGGACTGTCGGCTTGCAGCAGGTGCG CGTTCAGCGTGTAGACATGTGGAAAGCAGATCTAGACAAAGAGGGGCTTC GATTCTTTCTTGTTAGCAGGTGCGCGTTCAGCGTGTAGACATGTGGAAAG CAGATCTAGACAAAGAGGGGCTTCGATTCTTTCTTGTTAGCTGGGAGAAC ACCTCCCTTCTGTGCCAGGTCGACTCCGAGGCATCTCTTGACAGCTGGGC ACGTGCTCTCGATGAGAGCGTAGATCTTCGGCCGCAGCAATCCAAGGAGG ACAGGGCGAAGGTTGACATCGAGTTGAAGGCGAAGGAGGTCTGGACCACG AGGGAAGAGGGCTTGTGGGGCGGGCTATGACTGGGAGAACACCTCCCTTC TGTGCCAGGTCGACTCCGAGGCATCTCTTGACAGCTGGGCACGTGCTCTC GATGAGAGCGTAGATCTTCGGCCGCAGCAATCCAAGGAGGACAGGGCGAA GGTTGACATCGAGTTGAAGGCGAAGGAGGTCTGGACCACGAGGGAAGAGG GCTTGTGGGGCGGGCTATGA back to top
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