mRNA_P-fluviatile_contig13.1765.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1765.1 vs. uniprot
Match: A0A6H5JTB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB3_9PHAE) HSP 1 Score: 298 bits (762), Expect = 2.790e-85 Identity = 299/675 (44.30%), Postives = 340/675 (50.37%), Query Frame = 1
Query: 1 MGVAMSVNGLASLSVDEVADILADSPLFEYRQACVDFGIDGDMLVRLPADQLANALIRAGVDDKQHLEFLLDEINKIRCPRIDPSKLDRRNLRELLSQSDSLDWDEHSDTSEWSGVSLDSENRILGLNIANRNVSGELPAALGELSNLEYLHAPSNLLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCHLPIQLNGAIPR----------------------------------------------------ELGSLHLLVELRLRENTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--KIQPRVLSALAQSLVYLDLSHNAFEGELPLAALVPHMAGVSAASGDAESGSPPDGHGSRSGTRGDVVPTAAAVYSSLSYINLSHNKFTGGVPEEVGELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDEETGEGLGRLRSMETLRLDANTFEGSVPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSFRLDENRSLRGPIPASLASRPDCTVRADERVLEDTEAVMLGSKLDDWFLVPRKARSKT 1863
MGVAMS+ L +LSV E+AD+ E+RQA +DFGIDG ML LP DQL +AL RAGV+DKQHL +LL+EI IR P+IDPSKLDR NLR +L +SDS D +E S SEWSGVS+DS++RI+ LN+ NR++SGELPAAL E+SNLEYLHA SNL L + N R EL SLH LVELRLREN L XXXXXXXXX XXXXXXXXXXXXXXXXXXXX KI P +LS L+ SLVYL+L HNAFEG+LP++ L H AG G SGS DG G S + A S LSY+NL HNKFTG VPEE+G L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + + G GLGRL S+E LRLD NTF G VPAA RS RL+EN SLRGPIP LAS +C VRAD+ VLEDTEA MLGSKLD+WFL+PRKAR K+
Sbjct: 1 MGVAMSLEELGALSVVELADLAPP----EHRQASIDFGIDGHMLTSLPLDQLQDALARAGVEDKQHLVYLLEEIENIRRPKIDPSKLDRENLRAILERSDSGDHEELSGRSEWSGVSVDSDDRIIALNVTNRHLSGELPAALFEISNLEYLHATSNLFAAKGAKLLAIGLSFESQSLHHPPTFCLRHIPCLLFSCPFLGGIVWISLYTILPIGAIPDTIGDLKRLVS------LKLDHNSLTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANKARRWISSPELASLHFLVELRLRENRLAGKISPMLVNMQSXXXXXXXXXALQGHIPESLGEMTNLRELWLGRRENQXXXXXXXXXXXXXXXXXXXXSRNKALWKIHPHILSTLSSSLVYLNLGHNAFEGDLPVSPLSSHSAGGRVRRGS-RSGSQSDGQGRNSRRKRSESAAAVVSASPLSYLNLCHNKFTGHVPEEIGSLTSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDDGGGLGRLSSLEILRLDGNTFHGIVPAALGNLARLEVLHLQLDRLWALAVRDNNLSGRVPESLGCLTGL--------------RSLRLEENPSLRGPIPDQLASGVNCNVRADQPVLEDTEAAMLGSKLDEWFLMPRKARGKS 650
BLAST of mRNA_P-fluviatile_contig13.1765.1 vs. uniprot
Match: D7FPI3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI3_ECTSI) HSP 1 Score: 206 bits (524), Expect = 8.560e-54 Identity = 382/545 (70.09%), Postives = 411/545 (75.41%), Query Frame = 1
Query: 229 IRCPRIDPSKLDRRNLRELLSQSDSLDWDEHSDTSEWSGVSLDSENRILGLNIANRNVSGELPAALGELSNLEYLHAPSNLLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCHLPIQLNGAIPRELGSLHLLVELRLRENTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIQPRVLSALAQSLVYLDLSHNAFEGELPLAALVPHMAGVSAASGDAESGSPPDGHGSRSGTRGDVVPTAAAVYSSLSYINLSHNKFTGGVPEEVGELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLDEETGEGLGRLRSMETLRLDANTFEGSVPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSFRLDENRSLRGPIPASLASRPDCTVRADERVLEDTEAVMLGSKLDDWFLVPRKARSKT 1863
IRCPRIDPSKLDR NLR +L +SDS D +E S SEWSGVS+DS++RI+ LN+ NR +SGELPAAL E+SNLEYLHA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX KI P VLSAL+ SLVYL+L HNAFEG+LP++ L PH AG G SGSP +G G S R S LSY+NL HNKFTG V EE+G L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+ + G GLGRL S+ETLRLD NTF G VPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RL+EN SLRGPIP LAS +C VRAD+ VL+DTEA MLGS+LD+WFL+PRKAR K+
Sbjct: 2 IRCPRIDPSKLDRENLRAILERSDSNDREELSGRSEWSGVSVDSDDRIIVLNVTNRTLSGELPAALFEISNLEYLHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------KIHPHVLSALSSSLVYLNLGHNAFEGDLPVSPLSPHSAGGRVRRGST-SGSPSEGQGRSSRRRRSESAAGVVSASPLSYLNLCHNKFTGRVSEEIGSLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGILEGDDGGGLGRLSSLETLRLDGNTFHGIVPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLEENPSLRGPIPDQLASGVNCNVRADQPVLDDTEATMLGSRLDEWFLMPRKARGKS 525 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1765.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1765.1 >prot_P-fluviatile_contig13.1765.1 ID=prot_P-fluviatile_contig13.1765.1|Name=mRNA_P-fluviatile_contig13.1765.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=928bp MGVAMSVNGLASLSVDEVADILADSPLFEYRQACVDFGIDGDMLVRLPADback to top mRNA from alignment at P-fluviatile_contig13:1480217..1490201- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1765.1 ID=mRNA_P-fluviatile_contig13.1765.1|Name=mRNA_P-fluviatile_contig13.1765.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9985bp|location=Sequence derived from alignment at P-fluviatile_contig13:1480217..1490201- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:1480217..1490201- >mRNA_P-fluviatile_contig13.1765.1 ID=mRNA_P-fluviatile_contig13.1765.1|Name=mRNA_P-fluviatile_contig13.1765.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5568bp|location=Sequence derived from alignment at P-fluviatile_contig13:1480217..1490201- (Porterinema fluviatile SAG_2381)back to top |