mRNA_P-fluviatile_contig13.1763.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1763.1
Unique NamemRNA_P-fluviatile_contig13.1763.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:1472749..1476043 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-12_000680.1
Exons5
Model size1869
Cds size1869
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1763.1prot_P-fluviatile_contig13.1763.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 1472749..1476043 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815559.4018378-CDS-P-fluviatile_contig13:1472748..14737571622815559.4018378-CDS-P-fluviatile_contig13:1472748..1473757Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1472749..1473757 -
1693562239.4227219-CDS-P-fluviatile_contig13:1472748..14737571693562239.4227219-CDS-P-fluviatile_contig13:1472748..1473757Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1472749..1473757 -
1622815559.4203162-CDS-P-fluviatile_contig13:1473808..14742481622815559.4203162-CDS-P-fluviatile_contig13:1473808..1474248Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1473809..1474248 -
1693562239.43241-CDS-P-fluviatile_contig13:1473808..14742481693562239.43241-CDS-P-fluviatile_contig13:1473808..1474248Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1473809..1474248 -
1622815559.4313467-CDS-P-fluviatile_contig13:1474890..14749571622815559.4313467-CDS-P-fluviatile_contig13:1474890..1474957Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1474891..1474957 -
1693562239.441896-CDS-P-fluviatile_contig13:1474890..14749571693562239.441896-CDS-P-fluviatile_contig13:1474890..1474957Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1474891..1474957 -
1622815559.4418259-CDS-P-fluviatile_contig13:1475372..14754591622815559.4418259-CDS-P-fluviatile_contig13:1475372..1475459Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1475373..1475459 -
1693562239.4520993-CDS-P-fluviatile_contig13:1475372..14754591693562239.4520993-CDS-P-fluviatile_contig13:1475372..1475459Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1475373..1475459 -
1622815559.4517233-CDS-P-fluviatile_contig13:1475777..14760431622815559.4517233-CDS-P-fluviatile_contig13:1475777..1476043Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1475778..1476043 -
1693562239.4622343-CDS-P-fluviatile_contig13:1475777..14760431693562239.4622343-CDS-P-fluviatile_contig13:1475777..1476043Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1475778..1476043 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1763.1

>prot_P-fluviatile_contig13.1763.1 ID=prot_P-fluviatile_contig13.1763.1|Name=mRNA_P-fluviatile_contig13.1763.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=623bp
MLNSRKGNLSCFQWEVERFQQSHRENMAAITPQINNKDATMAQQYRRQVG
GTRKRLAREQLAEIDKQKNNAWLIERMVRIHRIGGFQRRYLHEFQDVKAA
LQFGKTNVGVSRAVNERRFSRRKKTQELVRLENAKFFMRLASPKRSGIDF
NKFETDFTKSREHRRLAQCNRTVGHTAVFSSVKAQTPCLSADNNTPSGLP
MRLRKQLSTKEQQNEQPDYRLSPEGLKPGSSPTLGPKLSSNSNAGNRNRS
AADDIKAQIMARNGGNASESWGVTPRRPHTAGGCRRSDHRDFFDARAADP
GWGNSSTSPARRRPPSAPERRRRDFDATIARRREPPPSARITRARGEPVG
GHRSSRPETTPNCTGRKETHAEGSKDGHDDDRATELTDEDSAEFPTDRGE
CGGRGAPTWCLGRTLLVKAKVLISSAKPDDSRMAFPAGGRARRRLRQKVG
LRLFSIDGLIRQREGVQKTLRGFVAEASPITRPRVSPPFGRATVVNGKGA
TCSGSVGLCYTPVAIPAVQGYLESAGLGLPAGDVLEPFRAACPMDDRGNY
PEVNALLGQVGQRTLYQILLGSCHVSISGGRSEGRIGVELLRVNAEGVGV
SATATSTRPKRQPRLERPQDGNP
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mRNA from alignment at P-fluviatile_contig13:1472749..1476043-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1763.1 ID=mRNA_P-fluviatile_contig13.1763.1|Name=mRNA_P-fluviatile_contig13.1763.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3295bp|location=Sequence derived from alignment at P-fluviatile_contig13:1472749..1476043- (Porterinema fluviatile SAG_2381)
ATGCTCAATTCTCGGAAAGGGAATCTTTCGTGCTTCCAATGGGAAGTAGA
GCGCTTCCAGCAGAGCCACCGGGAAAACATGGCCGCCATAACCCCACAGA
TAAATAACAAGGACGCTACAATGGCGCAGCAATATCGACGACAGGTCGGA
GGGACGCGTAAACGACTTGCCCGGGAGCAGCTCGCCGAAATCGACAAGCA
AAAGAACAACGCATGGCTTATCGAGAGAATGGTTCGGATTCACCGCATTG
GAGGCTTCCAGAGAAGGTTCAACATTGACCAGTCGGCACTGAGTAAACGT
TATGACATGAACGTATGTCAATATGAGTAGCTGCGTGTTTTTCGTATGCG
GTCGTCGCTCTGAACTGGCGTTCCGCACGGGAATTGTGCTTCGAAGGCAA
ACGATGGTTCGTTGCTCACACACACCACGCAGAAAAAAGAGCCGAGGAGG
AATTTTTCCTTTGCCGCTCCGAGCGAGCGAAGCGTCAGCGGGTGATCAAT
CTTTACGTTGTTCTCCTTGTCGAGGGATCTAAATTGAAGAGAGTTACAAA
GTTCATGGATCTTTTCTGCCCTTGCTGCACGAAGGTATCTCCACGAGTTT
CAAGACGTCAAGGCGGCACTGCAGTTTGGAAAAACGAATGTGGGAGTCTC
AAGAGCGGTGAATGAACGAAGGTACAGTGCCGGCCCGCTCATAAGAAACA
TCTTCGTAAGAAACCGAGGCTCAGATTTTAGCTTACCTAAGAAATATGCC
GTAAGAAATTGTGTTCATCGGCCGGAGCTTCACTAAACCCTACATAGAAG
CCTGCGATCAATGGTGGGGGACATACTAAGAAATGAGCCTCTCTCGAGTT
TAGTGTTTTTTCGACCGGGCCGGCACTGTATTGCAATGCACGGCAGTCGT
AGGTAGGACGACCATTTCAGATGTTACGGCCATTCTACGTCTTTTCAGCA
CCCTACCGCAGTGGCCTGGAAGGTAACGAAGGTCATATGGTCTGGGCATA
CGCGATGTATCCATTTTCCTCTGGACACAGCGAACGTGTGTCGTGCAGCT
ACTGCTGAGACGGCTCAAAACTACATCAAACCACAGATTCTCTCGGAGGA
AGAAGACCCAAGAGCTTGTACGACTGGAGAACGCCAAATTTTTTATGCGA
CTGGTGAGTGTTTACAGAGAAATGTATGTGGGTACTACCCTTACAAGGGA
AGCTATCCTGACCGTCCAACGGCGCAGCGATACGGCGTCCGCTCTGCGAG
CGCAATGTCGCGGGTTCGAATCAGGCCCGGTGCACGTTTCCTTTCGTGAT
GGTGCCCGCGATTTTGAAAGAAATTTTGTTGCGCAGAGGCAGATCGAACC
AGGAGCTGATGGCCGAACTCTCGGAATTTCTCTGATAAGTCGTGGCGGTG
TTTGGCCCGCGTAACACGACAAGAAGATAGTTGGAAAAAAGAAGGGCTGT
CTTCTCGCCGGAAACCGGTCGGTTTCCGGTAACCCAAGATGAGTTTTCTT
CCTGCTTAGGCTAGCGACCAAGAAAAAGGCTCGAAAACTTGGGGGGTGAT
GTGGATACTATCCTTACAAGGAAAGCGTGTCCTTACCATATATTACCGTT
TTCTCTCCGAGCACGATTTATTCTGTGCCGGTGGCATATCGTTGGCGTTC
AAGTCTTCGATACCATATATCGAGGGCCATCGTCGCTGCTTATCCGTGTT
TGCCTTGGATTTTTTTCTGGGATCATTACCACGGGCGTCCTTCGCAGTTT
GACCCCTCCCACCTTGCTGCTGTTTTGTTCCATCCAATCTCGCAGGCAAG
CCCAAAACGCAGTGGAATAGACTTCAACAAGTTTGAGACTGACTTTACAA
AGAGTCGCGAGCACCGCCGCTTAGCGCAATGCAACCGCACCGTTGGACAC
ACAGCAGTATTTTCAAGTGTCAAGGCCCAAACACCTTGCCTCAGCGCCGA
TAATAATACCCCCAGCGGTCTGCCAATGCGTCTCCGGAAGCAGCTATCCA
CCAAGGAGCAACAAAATGAGCAACCTGATTATCGTCTATCGCCGGAGGGG
TTGAAGCCCGGTTCGTCGCCAACACTTGGTCCAAAATTATCTTCAAACAG
CAACGCAGGCAACCGAAATCGATCCGCTGCGGATGATATCAAAGCTCAGA
TAATGGCGAGAAATGGTGGCAATGCCTCCGAATCTTGGGGTGTCACTCCG
CGCAGGCCTCACACGGCTGGTGGGTGCAGAAGATCGTCGCCGTCACTTGA
GCGTCCCCGCACCGCGCTCGGCTGGCAGTCCCGCAGCGACCACCGCGACT
TTTTCGACGCCCGGGCCGCTGACCCCGGGTGGGGAAACAGCAGCACTAGT
CCTGCAAGACGCCGTCCCCCTTCGGCCCCCGAGAGGAGGAGGAGAGATTT
CGATGCGACCATCGCTCGAAGAAGAGAACCACCGCCGTCCGCACGCATAA
CCCGTGCCAGAGGCGAACCGGTGGGTGGGCATCGATCAAGCAGGCCGGAA
ACAACGCCGAACTGCACAGGGCGCAAAGAAACCCATGCGGAAGGGTCGAA
AGACGGCCATGATGACGACCGCGCAACGGAGTTGACCGACGAAGATTCAG
CAGAATTTCCAACCGACCGCGGAGAATGCGGTGGCAGAGGAGCACCCACA
TGGTGCCTTGGGCGCACGCTGCTCGTTAAAGCCAAGGTTCTCATCAGCAG
CGCGAAACCCGACGATAGTCGGATGGCATTCCCGGCCGGCGGACGAGCAC
GTCGAAGACTCCGCCAGAAGGTAGGTCTAAGATTATTCAGCATCGATGGC
CTCATCAGGCAGCGCGAGGGTGTTCAGAAAACCCTCCGAGGCTTCGTGGC
GGAGGCTTCTCCAATCACTCGCCCCCGGGTCTCGCCCCCGTTTGGCCGCG
CGACGGTCGTGAACGGGAAGGGAGCTACGTGCAGCGGCAGCGTGGGACTC
TGCTATACGCCCGTTGCTATCCCGGCCGTGCAAGGTTACTTGGAAAGCGC
CGGCCTGGGTCTTCCAGCGGGAGACGTCCTTGAACCGTTTCGGGCCGCAT
GCCCGATGGACGATCGGGGAAACTATCCTGAGGTGAACGCCTTGCTCGGG
CAGGTTGGCCAGCGTACCCTTTACCAAATTCTGCTCGGAAGCTGCCACGT
TTCCATCTCAGGTGGCCGGAGCGAAGGGAGGATCGGCGTCGAGCTCCTGC
GGGTGAACGCCGAAGGCGTGGGGGTCTCTGCGACAGCAACTTCAACCCGG
CCCAAACGCCAACCGCGTCTTGAGCGACCACAGGACGGAAATCCG
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:1472749..1476043-

>mRNA_P-fluviatile_contig13.1763.1 ID=mRNA_P-fluviatile_contig13.1763.1|Name=mRNA_P-fluviatile_contig13.1763.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3738bp|location=Sequence derived from alignment at P-fluviatile_contig13:1472749..1476043- (Porterinema fluviatile SAG_2381)
ATGCTCAATTCTCGGAAAGGGAATCTTTCGTGCTTCCAATGGGAAGTAGA
GCGCTTCCAGCAGAGCCACCGGGAAAACATGGCCGCCATAACCCCACAGA
TAAATAACAAGGACGCTACAATGGCGCAGCAATATCGACGACAGGTCGGA
GGGACGCGTAAACGACTTGCCCGGGAGCAGCTCGCCGAAATCGACAAGCA
AAAGAACAACGCATGGCTTATCGAGAGAATGGTTCGGATTCACCGCATTG
GAGGCTTCCAGAGAAGATGCTCAATTCTCGGAAAGGGAATCTTTCGTGCT
TCCAATGGGAAGTAGAGCGCTTCCAGCAGAGCCACCGGGAAAACATGGCC
GCCATAACCCCACAGATAAATAACAAGGACGCTACAATGGCGCAGCAATA
TCGACGACAGGTCGGAGGGACGCGTAAACGACTTGCCCGGGAGCAGCTCG
CCGAAATCGACAAGCAAAAGAACAACGCATGGCTTATCGAGAGAATGGTT
CGGATTCACCGCATTGGAGGCTTCCAGAGAAGGTATCTCCACGAGTTTCA
AGACGTCAAGGCGGCACTGCAGTTTGGAAAAACGAATGTGGGAGTCTCAA
GAGCGGTGAATGAACGAAGGTATCTCCACGAGTTTCAAGACGTCAAGGCG
GCACTGCAGTTTGGAAAAACGAATGTGGGAGTCTCAAGAGCGGTGAATGA
ACGAAGATTCTCTCGGAGGAAGAAGACCCAAGAGCTTGTACGACTGGAGA
ACGCCAAATTTTTTATGCGACTGATTCTCTCGGAGGAAGAAGACCCAAGA
GCTTGTACGACTGGAGAACGCCAAATTTTTTATGCGACTGGCAAGCCCAA
AACGCAGTGGAATAGACTTCAACAAGTTTGAGACTGACTTTACAAAGAGT
CGCGAGCACCGCCGCTTAGCGCAATGCAACCGCACCGTTGGACACACAGC
AGTATTTTCAAGTGTCAAGGCCCAAACACCTTGCCTCAGCGCCGATAATA
ATACCCCCAGCGGTCTGCCAATGCGTCTCCGGAAGCAGCTATCCACCAAG
GAGCAACAAAATGAGCAACCTGATTATCGTCTATCGCCGGAGGGGTTGAA
GCCCGGTTCGTCGCCAACACTTGGTCCAAAATTATCTTCAAACAGCAACG
CAGGCAACCGAAATCGATCCGCTGCGGATGATATCAAAGCTCAGATAATG
GCGAGAAATGGTGGCAATGCCTCCGAATCTTGGGGTGTCACTCCGCGCAG
GCCTCACACGGCTGGTGGGTGCAGAAGATCGCAAGCCCAAAACGCAGTGG
AATAGACTTCAACAAGTTTGAGACTGACTTTACAAAGAGTCGCGAGCACC
GCCGCTTAGCGCAATGCAACCGCACCGTTGGACACACAGCAGTATTTTCA
AGTGTCAAGGCCCAAACACCTTGCCTCAGCGCCGATAATAATACCCCCAG
CGGTCTGCCAATGCGTCTCCGGAAGCAGCTATCCACCAAGGAGCAACAAA
ATGAGCAACCTGATTATCGTCTATCGCCGGAGGGGTTGAAGCCCGGTTCG
TCGCCAACACTTGGTCCAAAATTATCTTCAAACAGCAACGCAGGCAACCG
AAATCGATCCGCTGCGGATGATATCAAAGCTCAGATAATGGCGAGAAATG
GTGGCAATGCCTCCGAATCTTGGGGTGTCACTCCGCGCAGGCCTCACACG
GCTGGTGGGTGCAGAAGATCCGACCACCGCGACTTTTTCGACGCCCGGGC
CGCTGACCCCGGGTGGGGAAACAGCAGCACTAGTCCTGCAAGACGCCGTC
CCCCTTCGGCCCCCGAGAGGAGGAGGAGAGATTTCGATGCGACCATCGCT
CGAAGAAGAGAACCACCGCCGTCCGCACGCATAACCCGTGCCAGAGGCGA
ACCGGTGGGTGGGCATCGATCAAGCAGGCCGGAAACAACGCCGAACTGCA
CAGGGCGCAAAGAAACCCATGCGGAAGGGTCGAAAGACGGCCATGATGAC
GACCGCGCAACGGAGTTGACCGACGAAGATTCAGCAGAATTTCCAACCGA
CCGCGGAGAATGCGGTGGCAGAGGAGCACCCACATGGTGCCTTGGGCGCA
CGCTGCTCGTTAAAGCCAAGGTTCTCATCAGCAGCGCGAAACCCGACGAT
AGTCGGATGGCATTCCCGGCCGGCGGACGAGCACGTCGAAGACTCCGCCA
GAAGGTAGGTCTAAGATTATTCAGCATCGATGGCCTCATCAGGCAGCGCG
AGGGTGTTCAGAAAACCCTCCGAGGCTTCGTGGCGGAGGCTTCTCCAATC
ACTCGCCCCCGGGTCTCGCCCCCGTTTGGCCGCGCGACGGTCGTGAACGG
GAAGGGAGCTACGTGCAGCGGCAGCGTGGGACTCTGCTATACGCCCGTTG
CTATCCCGGCCGTGCAAGGTTACTTGGAAAGCGCCGGCCTGGGTCTTCCA
GCGGGAGACGTCCTTGAACCGTTTCGGGCCGCATGCCCGATGGACGATCG
GGGAAACTATCCTGAGGTGAACGCCTTGCTCGGGCAGGTTGGCCAGCGTA
CCCTTTACCAAATTCTGCTCGGAAGCTGCCACGTTTCCATCTCAGGTGGC
CGGAGCGAAGGGAGGATCGGCGTCGAGCTCCTGCGGGTGAACGCCGAAGG
CGTGGGGGTCTCTGCGACAGCAACTTCAACCCGGCCCAAACGCCAACCGC
GTCTTGAGCGACCACAGGACGGAAATCCGCGACCACCGCGACTTTTTCGA
CGCCCGGGCCGCTGACCCCGGGTGGGGAAACAGCAGCACTAGTCCTGCAA
GACGCCGTCCCCCTTCGGCCCCCGAGAGGAGGAGGAGAGATTTCGATGCG
ACCATCGCTCGAAGAAGAGAACCACCGCCGTCCGCACGCATAACCCGTGC
CAGAGGCGAACCGGTGGGTGGGCATCGATCAAGCAGGCCGGAAACAACGC
CGAACTGCACAGGGCGCAAAGAAACCCATGCGGAAGGGTCGAAAGACGGC
CATGATGACGACCGCGCAACGGAGTTGACCGACGAAGATTCAGCAGAATT
TCCAACCGACCGCGGAGAATGCGGTGGCAGAGGAGCACCCACATGGTGCC
TTGGGCGCACGCTGCTCGTTAAAGCCAAGGTTCTCATCAGCAGCGCGAAA
CCCGACGATAGTCGGATGGCATTCCCGGCCGGCGGACGAGCACGTCGAAG
ACTCCGCCAGAAGGTAGGTCTAAGATTATTCAGCATCGATGGCCTCATCA
GGCAGCGCGAGGGTGTTCAGAAAACCCTCCGAGGCTTCGTGGCGGAGGCT
TCTCCAATCACTCGCCCCCGGGTCTCGCCCCCGTTTGGCCGCGCGACGGT
CGTGAACGGGAAGGGAGCTACGTGCAGCGGCAGCGTGGGACTCTGCTATA
CGCCCGTTGCTATCCCGGCCGTGCAAGGTTACTTGGAAAGCGCCGGCCTG
GGTCTTCCAGCGGGAGACGTCCTTGAACCGTTTCGGGCCGCATGCCCGAT
GGACGATCGGGGAAACTATCCTGAGGTGAACGCCTTGCTCGGGCAGGTTG
GCCAGCGTACCCTTTACCAAATTCTGCTCGGAAGCTGCCACGTTTCCATC
TCAGGTGGCCGGAGCGAAGGGAGGATCGGCGTCGAGCTCCTGCGGGTGAA
CGCCGAAGGCGTGGGGGTCTCTGCGACAGCAACTTCAACCCGGCCCAAAC
GCCAACCGCGTCTTGAGCGACCACAGGACGGAAATCCG
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