mRNA_P-fluviatile_contig13.1762.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1762.1
Unique NamemRNA_P-fluviatile_contig13.1762.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig13.1762.1 vs. uniprot
Match: D7G875_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G875_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 2.560e-50
Identity = 95/188 (50.53%), Postives = 128/188 (68.09%), Query Frame = 3 
Query:  309 GDLLSIEGAWVLDLARSETMERFLELSGLPVEGIRAHVRAERRYGGLNLIQLDENTFTIHKRTCANNSTESFEIGEEKVTHSSVTGRRKSCVVSVPDFDSGGYMLSARTGASTGS--ELHMLEKRYVIDGGLSHVQEIHLQNLTSGGECTTTRTWFRVPMTEEHRT-----ILANLPPQRSQRPLSQD 851
            G L SI GAWVLDL+RS+TMERFL+++ +  +G RAHVRAE R+G  N+I L+ +T TIH+RTCANN TESF++ EEKV +  +   R S +VS+P     GY+ SA + A +G   ++HMLE R++++G LSH QEI L NLT+G  C T R W RVPMT+EH+      +LA  P   S R L ++
Sbjct:    7 GGLNSIVGAWVLDLSRSDTMERFLQVTRVSEQGTRAHVRAEARHGAFNVIHLEGDTITIHRRTCANNFTESFKLDEEKVKYDGIVRTRISELVSMPSSGPTGYVRSANSTAISGGRDDVHMLESRHIMEGSLSHTQEIRLHNLTTGEHCVTNRVWTRVPMTDEHQATIGLLLLAEEPSSSSARILREN 194
[Close]
BLAST of mRNA_P-fluviatile_contig13.1762.1 vs. uniprot
Match: D7G874_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G874_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 8.040e-45
Identity = 89/167 (53.29%), Postives = 115/167 (68.86%), Query Frame = 3 
Query:  321 SIEGAWVLDLARSETMERFLELSGLPVEGIRAHVRAERRYGGLNLIQLDENTFTIHKRTCANNSTE-SFEIGEEKVTHSSVTGRRKSCVVSVPDFDSGGYMLSARTGASTGSE-LHMLEKRYVIDGGLSHVQEIHLQNLTSGGECTTTRTWFRVPMTEEHRTILANL 815
            SI GAWVLDL+RS+TME FL + G+P + IR HV AE  +GG N++ L E+T TIHKRTC N  TE S+ + EEKV ++ VT  R S V+SVP     G++ SA    + G + +HMLE R+V++GGL+H QEI L NLT+G +C T R W RVPMTEEH+  L  L
Sbjct:  117 SIVGAWVLDLSRSDTMELFLRIHGMPEKHIREHVSAETLHGGFNVVGLGEDTITIHKRTCTNCYTERSYTLDEEKVKYNEVTRTRVSEVLSVPCSGPTGFVRSANCSTAGGRDNVHMLETRHVVEGGLAHTQEIRLHNLTTGEDCVTNRVWMRVPMTEEHQAALGPL 283
[Close]
BLAST of mRNA_P-fluviatile_contig13.1762.1 vs. uniprot
Match: A0A6H5JV86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV86_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 2.410e-38
Identity = 79/151 (52.32%), Postives = 101/151 (66.89%), Query Frame = 3 
Query:  420 VRAERRYGGLNLIQLDENTFTIHKRTCANNSTESFEIGEEKVTHSSVTGRRKSCVVSVPDFDSGGYMLSARTGASTGS--ELHMLEKRYVIDGGLSHVQEIHLQNLTSGGECTTTRTWFRVPMTEEHRT-----ILANLPPQRSQRPLSQD 851
            VRAE R+G  N+I L+ +T TIHKRTCANN TESF++GEEKV H  +   R S VVS+P     GY+ SAR+ A +G   ++HMLE R++++GGLSH QEI L NLT+G  C T R W RVPMT+EH+      +LA  P   S R L Q+
Sbjct:    4 VRAEARHGAFNVIHLEGDTITIHKRTCANNFTESFKLGEEKVKHDGILRTRISEVVSMPSSRPTGYVRSARSTAVSGGRDDVHMLESRHIMEGGLSHTQEIRLHNLTTGEHCVTNRVWTRVPMTDEHQAMMGLLLLAEEPSSSSARILRQN 154
[Close]
BLAST of mRNA_P-fluviatile_contig13.1762.1 vs. uniprot
Match: D7G8E6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8E6_ECTSI)

HSP 1 Score: 131 bits (329), Expect = 2.780e-32
Identity = 81/156 (51.92%), Postives = 98/156 (62.82%), Query Frame = 3 
Query:  366 MERFLELSGLPVEGIRAHVRAERRYGG-LNLIQLDENTFTIHKRTCANNSTESFEIGEEKVTHSSVTGRRKSCVVSVPDFDSG--GYMLSARTGASTGSELH---MLEKRYVIDGGLSHVQEIHLQNLTSGGECTTTRTWFRVPMTEEHRTILANL 815
            M+R+LE+SG+P      HV AER++GG LNLI LDE T TIHKRT  NN TE+F +GEEKVT  SVT  R S   +V +  S   GY+   R   ST    H   +LE+RYV +GGL H+QEI  + LT+G EC   RTW RV MT EHR  L  L
Sbjct:    1 MQRYLEVSGMPATHAYTHVLAERKHGGALNLIHLDETTLTIHKRTYRNNYTETFVLGEEKVT--SVTPNRVSISTTVSNLGSSSRGYVCLIRN-TSTPERQHNTEVLERRYVANGGLCHIQEIKARCLTTGEECGIVRTWRRVMMTHEHRATLGLL 153
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G875_ECTSI2.560e-5050.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G874_ECTSI8.040e-4553.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JV86_9PHAE2.410e-3852.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8E6_ECTSI2.780e-3251.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:1462518..1470379 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size1542
Cds size621
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1762.1prot_P-fluviatile_contig13.1762.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 1466598..1469709 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815559.277017-UTR-P-fluviatile_contig13:1462517..14626911622815559.277017-UTR-P-fluviatile_contig13:1462517..1462691Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1462518..1462691 +
1693562239.3409588-UTR-P-fluviatile_contig13:1462517..14626911693562239.3409588-UTR-P-fluviatile_contig13:1462517..1462691Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1462518..1462691 +
1622815559.2882004-UTR-P-fluviatile_contig13:1466520..14665971622815559.2882004-UTR-P-fluviatile_contig13:1466520..1466597Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1466521..1466597 +
1693562239.3494897-UTR-P-fluviatile_contig13:1466520..14665971693562239.3494897-UTR-P-fluviatile_contig13:1466520..1466597Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1466521..1466597 +
1622815559.3675117-UTR-P-fluviatile_contig13:1469709..14703791622815559.3675117-UTR-P-fluviatile_contig13:1469709..1470379Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1469710..1470379 +
1693562239.4126568-UTR-P-fluviatile_contig13:1469709..14703791693562239.4126568-UTR-P-fluviatile_contig13:1469709..1470379Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1469710..1470379 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815559.301194-CDS-P-fluviatile_contig13:1466597..14667011622815559.301194-CDS-P-fluviatile_contig13:1466597..1466701Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1466598..1466701 +
1693562239.3568437-CDS-P-fluviatile_contig13:1466597..14667011693562239.3568437-CDS-P-fluviatile_contig13:1466597..1466701Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1466598..1466701 +
1622815559.3134675-CDS-P-fluviatile_contig13:1467317..14673811622815559.3134675-CDS-P-fluviatile_contig13:1467317..1467381Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1467318..1467381 +
1693562239.3651514-CDS-P-fluviatile_contig13:1467317..14673811693562239.3651514-CDS-P-fluviatile_contig13:1467317..1467381Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1467318..1467381 +
1622815559.3292458-CDS-P-fluviatile_contig13:1467651..14677521622815559.3292458-CDS-P-fluviatile_contig13:1467651..1467752Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1467652..1467752 +
1693562239.384028-CDS-P-fluviatile_contig13:1467651..14677521693562239.384028-CDS-P-fluviatile_contig13:1467651..1467752Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1467652..1467752 +
1622815559.3438406-CDS-P-fluviatile_contig13:1468327..14685171622815559.3438406-CDS-P-fluviatile_contig13:1468327..1468517Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1468328..1468517 +
1693562239.3940327-CDS-P-fluviatile_contig13:1468327..14685171693562239.3940327-CDS-P-fluviatile_contig13:1468327..1468517Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1468328..1468517 +
1622815559.35706-CDS-P-fluviatile_contig13:1469547..14697091622815559.35706-CDS-P-fluviatile_contig13:1469547..1469709Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1469548..1469709 +
1693562239.403578-CDS-P-fluviatile_contig13:1469547..14697091693562239.403578-CDS-P-fluviatile_contig13:1469547..1469709Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1469548..1469709 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1762.1

>prot_P-fluviatile_contig13.1762.1 ID=prot_P-fluviatile_contig13.1762.1|Name=mRNA_P-fluviatile_contig13.1762.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=207bp
MTRQPQQPRQQEPERTYGAGDLLSIEGAWVLDLARSETMERFLELSGLPV
EGIRAHVRAERRYGGLNLIQLDENTFTIHKRTCANNSTESFEIGEEKVTH
SSVTGRRKSCVVSVPDFDSGGYMLSARTGASTGSELHMLEKRYVIDGGLS
HVQEIHLQNLTSGGECTTTRTWFRVPMTEEHRTILANLPPQRSQRPLSQD
CSPGRT*
back to top

mRNA from alignment at P-fluviatile_contig13:1462518..1470379+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1762.1 ID=mRNA_P-fluviatile_contig13.1762.1|Name=mRNA_P-fluviatile_contig13.1762.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7862bp|location=Sequence derived from alignment at P-fluviatile_contig13:1462518..1470379+ (Porterinema fluviatile SAG_2381)
GCCGACGTGTGCGCGTATAAACGTTCGCATTCTTGTCTCACTCGCGATCT
CTCGCTTTGCAGTACACACGTGCTATCTGTAACTCGGTCTCAACACGGAA
CATAAATGCTGCACTACTCGGAAGCACAGCGTCATTACCGCACATACATC
CTGCCTCGCCAACCCCAACGGAAGGTATGCAGTCTATGCGCTGAGACGCT
TGCGCACATCGGCAACGTTTACTAATAGGTAGACTAGTTGTGGGAAACGG
CGGCAGGCAAATGTTACTACATAGACTACATGCATTTTTGTAGACTATTG
CCCCCGTTCCCTCTGGCGGTAAACGAGGAAGAGAAACACAAACATAAATT
CAGTGACAAGTACAGTTGGAAAAGTACACCAACACCCACGTGCACACACC
TTTCCCCAAAACCCACAAGCTCTGCTACTTGCCCTCAAGTGACATTTTTT
CTCACTCGTCGACAGGATTGTTATTCCATGGCATCATTTCGAACCTAGCA
AAATAAATCGGAAGTGGGTCGCGCTGGCTATGAGGCGCCGCTTTTGTATT
GTGAGCAATGAGTGGGTAGCGCTGGCGAATGAGTTCGCCGCCTTTCTTTG
TATTGTGCGCGATGGCTTGCTGTTTAGACTACGGCGCATGCATGCATGCG
TTCCTCTGCTGTAGATTAACCGATCACCCGCTGCGAACGGACCCTGTCGG
GTTTCGAGAGCACAGGCGGGGCCGCCCGCCAAAGGCAAACACGCCAGCTA
TCGACATGGTCTGACTGGCGTTCTCTTCCAGGTTGTTCGTTTCTGAACGG
ATGGGCTAGATGCTAGTTGTTCCTCTCTCTTACTCGGTGAGATGGATTTT
CCAACTTTCCCCGCCGTCTCCGCGTTCTCCACACACACAGCAGTGTTTGT
AGTTCGGTTGCAAGTAATACGCTGAAAACTTGCATTCGTGGAATGAACTT
CAGGGGATCTTCAGAGACCGCAGGGAAGAGGATTTTCATTGTGCTGATGC
CGGTGGTTCAGTCGCTTTAATACTCGTGCAGGAGAAGAGACCCCAGGCCC
CCCGCTCTCTCGCGCGACCAATTCGCCGTGAGAATCTCGCAATAATGCGG
ATATTTGCCTTTTAACGGATTTTTCAACTTCGCATAATTTGCCGCAAAAA
TGATTGGGGGACACACCGCAAGGAGTACGACAGACAGGGGGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAAAACTT
TAGAGCAGACTACATATCTTGTGGTGAGACATCCATTTTTTGTCATCGAG
GTTCTGATGTTTTTCGGGTCATCGTATGGAGCGCGTGTCCTTGGCCTGTC
ACATCAACAGCAACACATCATTCATCCTTATGCGTCTCCTCCGATCAAGA
AATTCCTCCAGTACGTCTGGTGTTTTCACTGCATTCCGCCTCAGACGGCT
CGTCTCAAATGTGGGGGCCCACATCACACCAAACGACTGGAAAATATATG
TCTCAAATTCCCGCCGACCACTTTCCTTCTGTCAAGCGAAAAGTTCTTCT
CAAACGGCCGGTCTCCAATTGGTTTGTTCTTGTCGAAGTTGGAGAGCAGA
GGGAGAAGAGAGATGAGATGGAGCGACAGCAACCGTAGGGCACGCTAAAT
CCACCAAGCGTAGACCCCACTCTCAACACACACCCCCAGGGCGACGTAGC
AAGCGTCGAGCCGAATATCCAAACTTTCCGTGCACCACGAACAGGGTCCG
CTTCACGTGATGGCCAGCGTGGTTCCGCCTCCGAAAGCCGCTCTCAACAG
GAACCTTTTCTCAAGACCAACCAAGACAGTACATACATACTCGTTTGGTT
CCGTCTCAAACCCGCCCGATCGCGCGGGAAAATCGTACGAAACGCCTAAA
AGGAGTACGACGTACACATGTTTTCATGGTTTTCTGTCTTAAACGGCCCG
TCTCAAATGGGACTCCATATCAAACCAAACGGCTGAAAAATTCGTCTCGG
ACCATCCCGGCCGAACAATCTACTTGTGTGATGCGAAAAAAACGTCTCAA
ACGGGTTACATTAACTGAGTGGCCCGATGACAGTTCCGACTCATAACGGC
TTCTCGCAAGAGGAATTTTGTTCAAGACCAATCGTGACAGTACATACCTA
CTCGGTGTTGATTCCTTCTCAAACGGCCCGCTCCTACGAACAAAGCCGTA
CTGTTCGCCACAACAATTTCCCACCGTTCGCCAAACTTTTTTTTTTTTTT
GCCCATCGAGTTTCTTGACGGGAGGGTGGGTGTGTCAAAGAAAACTGAGC
ACACACCTTTCCGATACTTTGTCTCGAGGTCGTCCTCGTCGCTAACTCTC
GTCCCCCTCGCTTTTCTTCGGCCTTCCTGTGTTGAACATGGTCCTTCCCA
CCCTACCATCGCAGTTGCACACGGAAACGCCCTCACACGGAGGAAAATCC
GGGTGGCCACCCCCCACGCTGGTCCTTATCACTGACAAGCGATTCCTCCC
TTCCGAATCCTATTTCTCTTCCTTGCATTCCCAAAATCGTCCCTTGCCTT
GGCTGTCTGATGTGCTCTTCTTCCCTCGCGCCCACCGTCTAGGAACCCCT
CACTAATTCCTACATATTCGCTCTCGCACGACATGGCCAAACCTGATGCC
CACCTCCCTTTTTGATCACCGCAAACGATACTCCACTCGCCGCCAACCTG
AAGTCCCCCCCCCCCATTCTCCCCGAGTGGATAACGAACTCAGATGGATT
CAGATTTGCCTCGTCTCCACGGAATGCCCGCCTACCCTCCTCGTGGATTC
ATCCGAATAGAGTGTTCTCGAGGGCAGCCCTTCCGCGAGGGATAAGGATG
GCACCGAGACCACATCTCCAACGCCACCCTCCCCATCCCATGCGGAAATG
TACGCCGGTTGGCGGGACGGGACACATCGTGCCCCTCCCACCCCGCGCCG
GTGATTTGGCACACGGAAAGGCCCCCCCGGAAGGGAGAAAACGTAGACGA
CCACCCCTTACACAAACGTAGACGACCAGCCCGCATCGCTGACCAGCGCC
TCGTGCGATCCTGGTTTGCTCCCCTATGATCCGAACATTAGCTCGCTGCC
GAATTTTATCTCCTTTCCTTCCTCCGGTGGTCGGGCAATCTCACCGGCTC
CTGCATTTGCTCTCGCATGCATACGTCAGAAATGGCTGGCAACTCTTCCA
CCCCCCCTCCTCTCTTGTTTTCACTCTGTCACGTCGTGCCTTTCAACAAA
CGTTTATTTTTGACCTCTCCATCGCATCTACTCCACTCGTTCTTCCTGCT
TCCAACTGCTCTTCCTCACCGGCTACACCTCGTTGCACTTGTCGTCTTAA
GGGCAGTTAATAGCTCTGACACCCTCGAAACGAGAAAGTACACTAGCTCA
CCGCTCAAAGCTGCCCCCAAATCGGTACACCTCGCTCCCCAACTCTGCAC
TGCAGTGTAGTACCATATGAGCTCCACACGTGCCTTCGCCACATCCATTC
ATACTTGTACTGCAACCTCTACAATCCCACGCCCGCTATAAAGGTTTCCG
ACCTTCTTCGACTGCCCTTGCAATCTAACCGGTGGCACACCCTGCCTAGA
ATGCTCTTTTCTCCCCTCCCCTCCCCCCCTCGTCGCTTGAGATGCGGTAC
AAACGCGCCGGCAATTTTGTACCACTCGCGTGGGAAATGCGAACTCCGAG
CCTCGCGAGCAACATACCGAGCATGTTCCGTTGCTGTGTGACGATTTTCA
TCATGGGTGTGCGGGGCGCGCTGCGCCGGAGGAAACGAGTTTCAAGCCTC
GAGCTGTGATCCAGGATCAACACGGGTCTACCGGAACCCTGCCGCGTTTG
TTGTATCGCTGTGCTGGGATGTTCATGTCGATAAGGTATTGGGAAAACAT
GCAGCTGTGGTTGCGAAGTCGGAATGCAGTTCTGGGGTGCATACATCCGG
GGATTAAGCACACTCGTGTCCGGCCTTGAATCTTGCCTTTGTCTCGAGAG
TAGCAGGAGAGGAGCAGCAGTCAAACGCAGACGACGACCCTGTGAGCAGC
AGCAATCGAGAGGTGTGACCGGTGATCTTCATGACTCGACAGCCGCAGCA
ACCGCGGCAGCAAGAGCCGGAGAGGACCTACGGGGCAGGGGATCTCCTCT
CGATCGAAGGTGCTTGGGTGCTTGATCTGGCCAGGTATAGTCCCATGTAT
ATTCCCGGCGTCGTACATGTTTGCCTAGGTTTGCTTTCACGGTCAATCAT
TAAAGAAAGCGGCAGGTATTAGACTATGGAAAATACAGCGCGACCGAGTT
TCCGCTCAGGACACGTTTTGTGAGCTACTAAAGACGTTCTTTCTCGATCC
GTGCTTTCCTGTTTCTATGGTGTGCGCTTTCTCTTTTCCTACATTTATCT
CTTGTGAGCTCGTGCTTTGGGCGTCCACTACTCGAAGTAAATCCTGAAAA
TCTGTCCGCGTCGAAATTATCAAGGAATGCGTTGTTCTGTATTGGGAGGG
AAACGTTGACAATCTGCAAGTACATTACTACCTTCCCATGATCCAAACGG
AGATCCGAGTGATCGTGCTCAGTTTTTTCTTCGCTAATCCACAAAGTTTA
TCATCAAGGCATCCCCAATCATCTAGGCAGACGAGTTCTACAAAATGGCA
GGTACACCTACCACCCCCTAAATAAACCCTGATTGCTTCACGAAACACCA
ACACCAGCCTCTGCCGAGCAATCTGCTAAATACAAAAAATTTATCGAGGC
TCGGAAAGACGAACCGGCTGACCCAGTGTTGCTCGAATCGATGGTCTAAG
GTCGGAAACGATGGAGCGCTTCCTCGAACTCAGCGGGCTGCCGGTGGAGG
GCATCCGTGCGCATGTGAGAAACACATCGGATGAGCGTAGAGATTCCACT
GCAAATTGAAGGAAAAGGTGTCAACCACCCCAGCAGTAGCAGAGGGAAAA
TCGAGACGAGTCGATAACGCCGAGTTTTGTCCGCAGTCAGTGTGTACAGA
GACCTCCACTAAAACCCCGCTTGCGCCTTGTCTTCGAGTTCCGGAGTCGC
CGTTAGGGACAAAACACGAAGATCGCCGAGGCATGTGGGCGGTCGCCTGT
TGATGGACTGATGCTCTCTGTTGGTTTGTTCTAGGTGAGGGCGGAGAGGC
GCTACGGAGGACTCAACCTCATCCAGCTGGACGAGAACACCTTCACGATT
CACAAGCGGACGTGCGCGAACAATTCCACGGAGAGGCGCGTAATGCCGTT
GCCGAGCCTTTTTTTGTCAAGCTTGGTGCTTAGCTCGTGTCGAAATGCCG
CAAGCGGGGCATGGGCAGCGACTGTCCAAGGCGGGTTTGTTGCCAAAATG
TTGTACCCGGACTAGCAATCTTCCCCCCTCCCCACTCCCTTCGAATACCC
CTTTACGCTCGCGGAGGAGTTACTGGCATGAAGGCGTGCGCAGGGTCAGG
TTTGCGCCGGGTTGGCAACGGCATTGCAAAGGAACGCCTCTTTCGCTGCG
TGAACGATGGAAACAAGGTTCCCGCCTTTGAAATCAGAGCGTCATGTTGC
ACCTTACCGCAATGGCGGTCTGGTTTGAACGTGTGCGTTGTGCGGCCTGA
AGAATCTCAATCCCGAACAAGGGGCATGATCGTACCGCGGAAGTACCGCG
ACGTCGCCCCCCCCCTTGCTTCCTCAGATGTTAGCACTACACCACGCTCG
AGTTCGAGGATGAACCCAGACCATCCCCCGCCGGAGACTCGGGAAATGAT
TGGGGCCCGCCTGTCCGTCCCCCCTGGCTGCCCGTGTCCGGCCGATCGCC
CCCCCAACAGCTTCGAGATCGGCGAGGAAAAAGTCACGCACAGCAGCGTC
ACCGGTCGCCGCAAGAGCTGCGTGGTTTCTGTCCCCGACTTCGATTCGGG
TGGGTACATGCTATCGGCCCGAACTGGCGCCTCGACCGGAAGCGAGCTTC
ACATGCTCGAGAAGCGCTACGTGATCGACGGCGGCCTATCCCACGTTCAG
GTTGGTAGCTAATTTAGGGTGCGGGAGGGACTGGCGGGGGCGTGCGGGAG
TCGTGCATCGGTTACTGCAGGAAAATATTGAGCGGGAGCTGGAAAATAGG
GTTGTTGAGCAAGAGTCTGAACGGATCAACTTCCGCCTAGCCCCCGCTGG
ATCTCACCTCGGTGTTTGCCATCGGGATTGGGTTTTCGTCGCTTGGCACG
ACGTTGTTAAACAAGCCAATTCGCTTCGTGAACTCGGCAACCAGGTTACC
GTCTTTTTTTTCCTCTGTTTTTTTTTGCGTTAACCATAATAGTGGTCGAG
AAGATCATGTTGTGCGGGGTGGAGAACCCTCACTCCGCGCAAGGGGGATG
ATCGCACCACGTTGTGTTAAAATGGTCAAGCACCCTCGAGGCAGTTACAC
AGTGCTTTCAACTGTCTCTGGAAGTGAAAGCACCAGAAAATAAATTAAGC
ATACGCAGCTGTCATCCGTATGCAAGGAAGTCAGCACAATATGCCGAACA
ACCTTCGCAGTGTACAGCGCACCCTTCATGCGACTCGCCGAATACCTCAC
GGCGCTTCGCGGTTGGTGGTGTGAGAGCCTGGTCCGGTGAGAACCCGGCG
TGCTCCGTCCCGGCTTTGTAGGGATGCTAGGTCAATGGTCTAACGACTAC
GGCATGCACGACTATGAGTACACCCCCCCCCCTCGGAGTTGCAGATTTCG
ATGATTGCCAACTTCGAAGGATTCAGATATTTGTATAAGGGCATCCGTTA
GCAATTTTCCCCCTTTCTGCCATGTTGTCCCATCCGTAGAGGTCTGGTAT
CCGTCCCCCCTCCGCCCATCTCGGAGCCGATTTTCGATTTTGGCCCCACG
TTTGTCAAAAATCGATCCGCCTTGACCCTTGTGATGAGAGGCAGTTTTAG
GAACACTTTCGTCGTCGGTGATTAAACAACGACCTCGAGAACGGCATCTC
ATCCTTTCCTTTTGTCCCGCCGCCTGTCGCTTCTCTCCATCACTCCCTGC
ACTCCACTGCGTTCACACACCACGACCTAGGAGATACACCTCCAGAACTT
AACGAGCGGAGGGGAGTGTACGACCACCAGAACGTGGTTTCGCGTGCCGA
TGACCGAGGAGCATCGGACGATTCTTGCTAACCTCCCGCCGCAGCGCTCT
CAACGTCCTCTCAGTCAGGATTGCTCCCCGGGCAGAACATAAACTGGCGA
TGGAGGGCGAGCCTATGTAAATACCGTAATGGTTTGGTTCTTCAATGGTG
TTTTAGACTTGCATTGATGGTACCGTGTGCGGATAAGTGTCTGTGGTAAG
ACAGAGCACATGGGGTGGGTGCAAGCACGGACTGGTGTAAGCACGGCACT
GCGCTACGGCACCAGCTGACCGATCGCGGCACGTCAAACGACGAATCACT
CCTACAGAATGACAAGGGATAAGTTCTGAGGAGAGCAACGTGCGTGAGAA
GCAAATGCCTGTTTAAGATTCCGTCGTCAGTTTTGTTTGGGAAAGTCTGC
GTGTTCTAGTTGCTCACAGTGATAACAGGTTACTCCAGGTGGGAGAACCA
TGTTGGTGATGTGTTGTAAAGGTATGGAAGCTTATCGTCGGTTGCTTCGG
TATCTACCCCGTGAACAACAACCGTAGGTTTTGACGGTTTGCCGTTTTTT
TACTTCGAGGTACTTGCGAATCGTCGTTTATTGGTGGACCCCGAAGATCT
CCACCTCTGTCGCAGTGCATAGATTGCATGTGAATAGTTTCCGCAGGGCA
GTATTTACGAGAGTAGCGCGTGCTGATTTCGAGTTGAGCGCTTTCGTTGG
CGGAAGAGGTACTTTCTTAGCAATATGGTCCGAATGTGAGCGAGAAGGTT
TCTGTGTTTCTG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig13:1462518..1470379+

>mRNA_P-fluviatile_contig13.1762.1 ID=mRNA_P-fluviatile_contig13.1762.1|Name=mRNA_P-fluviatile_contig13.1762.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1242bp|location=Sequence derived from alignment at P-fluviatile_contig13:1462518..1470379+ (Porterinema fluviatile SAG_2381)
ATGACTCGACAGCCGCAGCAACCGCGGCAGCAAGAGCCGGAGAGGACCTA
CGGGGCAGGGGATCTCCTCTCGATCGAAGGTGCTTGGGTGCTTGATCTGG
CCAGATGACTCGACAGCCGCAGCAACCGCGGCAGCAAGAGCCGGAGAGGA
CCTACGGGGCAGGGGATCTCCTCTCGATCGAAGGTGCTTGGGTGCTTGAT
CTGGCCAGGTCGGAAACGATGGAGCGCTTCCTCGAACTCAGCGGGCTGCC
GGTGGAGGGCATCCGTGCGCATGTCGGAAACGATGGAGCGCTTCCTCGAA
CTCAGCGGGCTGCCGGTGGAGGGCATCCGTGCGCATGTGAGGGCGGAGAG
GCGCTACGGAGGACTCAACCTCATCCAGCTGGACGAGAACACCTTCACGA
TTCACAAGCGGACGTGCGCGAACAATTCCACGGAGAGGTGAGGGCGGAGA
GGCGCTACGGAGGACTCAACCTCATCCAGCTGGACGAGAACACCTTCACG
ATTCACAAGCGGACGTGCGCGAACAATTCCACGGAGAGCTTCGAGATCGG
CGAGGAAAAAGTCACGCACAGCAGCGTCACCGGTCGCCGCAAGAGCTGCG
TGGTTTCTGTCCCCGACTTCGATTCGGGTGGGTACATGCTATCGGCCCGA
ACTGGCGCCTCGACCGGAAGCGAGCTTCACATGCTCGAGAAGCGCTACGT
GATCGACGGCGGCCTATCCCACGTTCAGCTTCGAGATCGGCGAGGAAAAA
GTCACGCACAGCAGCGTCACCGGTCGCCGCAAGAGCTGCGTGGTTTCTGT
CCCCGACTTCGATTCGGGTGGGTACATGCTATCGGCCCGAACTGGCGCCT
CGACCGGAAGCGAGCTTCACATGCTCGAGAAGCGCTACGTGATCGACGGC
GGCCTATCCCACGTTCAGGAGATACACCTCCAGAACTTAACGAGCGGAGG
GGAGTGTACGACCACCAGAACGTGGTTTCGCGTGCCGATGACCGAGGAGC
ATCGGACGATTCTTGCTAACCTCCCGCCGCAGCGCTCTCAACGTCCTCTC
AGTCAGGATTGCTCCCCGGGCAGAACATAAGAGATACACCTCCAGAACTT
AACGAGCGGAGGGGAGTGTACGACCACCAGAACGTGGTTTCGCGTGCCGA
TGACCGAGGAGCATCGGACGATTCTTGCTAACCTCCCGCCGCAGCGCTCT
CAACGTCCTCTCAGTCAGGATTGCTCCCCGGGCAGAACATAA
back to top