mRNA_P-fluviatile_contig13.1735.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1735.1
Unique NamemRNA_P-fluviatile_contig13.1735.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig13.1735.1 vs. uniprot
Match: D7G860_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G860_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 4.660e-85
Identity = 175/211 (82.94%), Postives = 182/211 (86.26%), Query Frame = 1 
Query:  175 MADMAWNIKCREEDMEFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASLSALIAGFALVALVEINIPSDVNAVLLVFFGSTAALVVGLMLLAMLSSTFMLVAIMKYDVKAKDPDYPSFQRFWASRCESDWRFSFRAFNVGIPLFMGVLAEVGWITLDNGSIGHRLAAGMISIIALTSGLVFYAYTYRKWGPFLSNAKLDLHIIQDQ 807
            MADMAWNIKCREEDMEFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASLSALIAGFALVA+VE                      VGLMLLAMLSSTFMLVAIMKYDVKAKD  YPSFQRFWASRCESDWRFSFRAFN+GIPLFMGVLAEVGWITLD+GS+ HR+AAG IS+IAL S L+FYAYTYRKWGPFLSNAKLDLHIIQ Q
Sbjct:    9 MADMAWNIKCREEDMEFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASLSALIAGFALVAMVE----------------------VGLMLLAMLSSTFMLVAIMKYDVKAKDRHYPSFQRFWASRCESDWRFSFRAFNIGIPLFMGVLAEVGWITLDDGSVAHRVAAGAISVIALLSTLIFYAYTYRKWGPFLSNAKLDLHIIQAQ 197
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BLAST of mRNA_P-fluviatile_contig13.1735.1 vs. uniprot
Match: A0A836C9P0_9STRA (Calcium release-activated calcium channel protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9P0_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.870e-45
Identity = 87/200 (43.50%), Postives = 122/200 (61.00%), Query Frame = 1 
Query:  175 MADMAWNIKCREEDMEFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASLSALIAGFALVALVEINIPSDVNAVLLVFFGSTAALVVGLMLLAMLSSTFMLVAIMKYDVK-AKDPDYPSFQRFWASRCESDWRFSFRAFNVGIPLFMGVLAEVGWITLDNGSIGHRLAAGMISIIALTSGLVFYAYTYRKWGPFLS 771
            +ADMAW +KCREED+E+RR                               +A LSAL+AGFALVA+ ++ IP  VN  LLV FG+  A  VG+ L+AMLSST +LVA++KYD K A +   P F  FW++ CE+DWR SFR FN+ I LF+ VL +VGWI        +  ++ +++++A+ S +V++ YTYRKW  FL+
Sbjct:    2 VADMAWGMKCREEDLEYRRLEMEWRKHDLWCRWVDEQWHAMEEKAKQLEQIAQLSALLAGFALVAMCQMQIPDGVNGWLLVSFGTVTAAAVGVPLIAMLSSTLVLVAVIKYDPKVAVNAACPDFGTFWSTHCEADWRLSFRCFNISIALFLMVLGQVGWIQFFAHQ-NYVASSTLVTVVAVASAMVYFLYTYRKWSTFLA 200
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BLAST of mRNA_P-fluviatile_contig13.1735.1 vs. uniprot
Match: A0A6S9GQE6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9GQE6_9STRA)

HSP 1 Score: 162 bits (410), Expect = 7.340e-45
Identity = 110/210 (52.38%), Postives = 146/210 (69.52%), Query Frame = 1 
Query:  160 SGGMGMADMAWNIKCREEDMEFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASLSALIAGFALVALVEINIPSDVNAVLLVFFGSTAALVVGLMLLAMLSSTFMLVAIMKYDVKAKDPDYPSFQRFWASRCESDWRFSFRAFNVGIPLFMGVLAEVGWITLDNGSIGHRLAAGMISIIALTSGLVFYAYTYRKWGPFL--SNAKL 783
            S GM MADMAW +KCREED     XXXXXXXXXXXXXXXXXX             V++ SALIAGF++V LVE+ IP ++N VLLV FG T A VVGLML AML+STFMLVAI++YD   ++     F +FW +RCESDW+F+ RAF  G+PLF+ VLA++GW+          +A+ +++ +A+ + ++++A+T RKW  FL  S+AKL
Sbjct:   19 SAGMEMADMAWEMKCREEDXXXXXXXXXXXXXXXXXXXXXXXAQQLKA-------VSNQSALIAGFSMVVLVEVQIPKNMNPVLLVTFGCTTAAVVGLMLTAMLNSTFMLVAILRYDCVQREVP---FAKFWRTRCESDWKFALRAFAYGVPLFLCVLAQIGWVVFWEHQSARYIASSLVTFVAMCTIIIWFAHTERKWRDFLLRSDAKL 218
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BLAST of mRNA_P-fluviatile_contig13.1735.1 vs. uniprot
Match: A0A7S4NBN3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NBN3_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.050e-44
Identity = 105/208 (50.48%), Postives = 141/208 (67.79%), Query Frame = 1 
Query:  166 GMGMADMAWNIKCREEDMEFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASLSALIAGFALVALVEINIPSDVNAVLLVFFGSTAALVVGLMLLAMLSSTFMLVAIMKYDVKAKDPDYPSFQRFWASRCESDWRFSFRAFNVGIPLFMGVLAEVGWITLDNGSIGHRLAAGMISIIALTSGLVFYAYTYRKWGPFLSNAKLDL 789
            GM MADMAW +KCREEDM+ R    XXXXXXXXXXXXXX              V+  SALIAGF++V LVE+ IPSD++ VLLV FG T A VV LML++ML+STF+LVAI++YD   ++     F  FW  RCESDW+F+ RAF   +PLFM VLA++GW+   +       A+ +I++IA+ + + ++A+T RKWG FL +++  L
Sbjct:   10 GMEMADMAWEVKCREEDMKQRALENXXXXXXXXXXXXXXKAQQLKA-------VSHQSALIAGFSMVVLVEVQIPSDLHPVLLVMFGCTTAGVVSLMLVSMLNSTFVLVAILRYDCVRREAP---FAEFWRKRCESDWKFALRAFGYAVPLFMCVLAQIGWVVFWDHESARIYASTLITVIAMVTIVFWFAHTDRKWGGFLLSSEARL 207
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BLAST of mRNA_P-fluviatile_contig13.1735.1 vs. uniprot
Match: A0A6U0JNC6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JNC6_9STRA)

HSP 1 Score: 160 bits (405), Expect = 3.120e-44
Identity = 107/212 (50.47%), Postives = 143/212 (67.45%), Query Frame = 1 
Query:  160 SGGMGMADMAWNIKCREEDMEFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASLSALIAGFALVALVEINIPSDVNAVLLVFFGSTAALVVGLMLLAMLSSTFMLVAIMKYD-VKAKDPDYPSFQRFWASRCESDWRFSFRAFNVGIPLFMGVLAEVGWITLDNGSIGHRLAAGMISIIALTSGLVFYAYTYRKWGPFLSNAKLDLH 792
            S GM MADMAW +KCREEDM+ R    XXXXXXXXXXXXXX              V+  SALIAGF++V LVEI IP+D++  LLV FG T A VV LML+AML++T++LVAI++YD VK + P    F  FW  RCESDW+ + +AF +G+PLF+ VLA +GW+   +       A+ +++ IAL + L+++A+T RKWG FL + +  LH
Sbjct:    9 SAGMDMADMAWEVKCREEDMKQRALENXXXXXXXXXXXXXXKAQQLKA-------VSHQSALIAGFSMVVLVEIQIPTDLSPGLLVTFGCTTAGVVSLMLIAMLNATYILVAILRYDCVKRETP----FSDFWRKRCESDWQLALKAFGLGVPLFLCVLALIGWVIFWDHESARYYASALVTTIALVTLLLWFAHTDRKWGKFLMSTEAKLH 209
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BLAST of mRNA_P-fluviatile_contig13.1735.1 vs. uniprot
Match: A0A7S2S1Q7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1Q7_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.650e-40
Identity = 96/219 (43.84%), Postives = 141/219 (64.38%), Query Frame = 1 
Query:  181 DMAWNIKCREEDMEFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASLSALIAGFALVALVEINIPSDVNAVLLVFFGSTAALVVGLMLLAMLSSTFMLVAIMKYDVKA--------KDPDYPSFQRFWASRCESDWRFSFRAFNVGIPLFMGVLAEVGWITLDNGSIGHR-LAAGMISIIALTSGLVFYAYTYRKWGPFLSNAKLDLHIIQDQP 810
            DMAW+++CR+EDM  R         XXXXXXXXXXXXXXX        ++ LSALIAGFA++ +VEI +P D++  LLV FG T+A VVGLML+AMLSST +L+AI+K+D K+        + P + SF+ FW + CE DW+ +++AF  G+PLFM VLA++GWI      +  R +AA +++I+A  +   ++ +   KWG F+ ++      +  +P
Sbjct:   16 DMAWDVRCRDEDMVQRATENHRRRIXXXXXXXXXXXXXXXEKAEQLKAISHLSALIAGFAMIVMVEIQLPDDLHLGLLVIFGGTSAGVVGLMLIAMLSSTMVLIAILKFDCKSVADTASSGRPPRFQSFEEFWTTLCEDDWQMAYQAFTKGVPLFMCVLAQLGWIIFHGYGVKDRNIAASIVTIVAALTSCWWFTHAVSKWGYFIKHSATGEGHVAKEP 234
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BLAST of mRNA_P-fluviatile_contig13.1735.1 vs. uniprot
Match: B8BUZ2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUZ2_THAPS)

HSP 1 Score: 140 bits (352), Expect = 9.590e-36
Identity = 110/225 (48.89%), Postives = 148/225 (65.78%), Query Frame = 1 
Query:  166 GMGMADMAWNIKCREEDMEFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASLSALIAGFALVALVEINIPSDVNAVLLVFFGSTAALVVGLMLLAMLSSTFMLVAIMKYDVKAKDPDYPSFQRFWASRCESDWRFSFRAFNVGIPLFMGVLAEVGWITL-DNGSIGHRLAAGMISIIALTSGLVFYAYTYRKWGPFLSNAKLDLHIIQDQPSRHHAGHPS 837
            GM MADMAW +KCREEDM+ R     XXXXXXXXXXXXXXXXXXXXXXXX       SAL+AGF++V LVE NIP D+N  LL  FG   A V+ LML++ L++T+MLVAI++YD   ++     F  FW  RCE DW+ + R F+ GIPLFM V+A V W++  D+ S+ +  +A +++ I++   ++++  T RKWG FL  +  D  I+    S  H G P+
Sbjct:    7 GMEMADMAWEVKCREEDMKQRALENEXXXXXXXXXXXXXXXXXXXXXXXX-------SALVAGFSMVVLVESNIPPDINGALLTLFGGVTACVIALMLVSTLNATYMLVAILRYDCVNREVP---FDEFWRKRCEPDWKMALRTFSYGIPLFMVVVALVAWVSFWDHESLYY--SASVVTAISVMVLILWFGSTERKWGEFLRMS--DARILTRGMSFGHEGDPT 217
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BLAST of mRNA_P-fluviatile_contig13.1735.1 vs. uniprot
Match: K0S0L8_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S0L8_THAOC)

HSP 1 Score: 127 bits (320), Expect = 8.340e-31
Identity = 88/201 (43.78%), Postives = 122/201 (60.70%), Query Frame = 1 
Query:  166 GMGMADMAWNIKCREEDMEFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASLSALIAGFALVALVEINIPSDVNAVLLVFFGSTAALVVGLMLLAMLSSTFMLVAIMKYDVKAKDPDYPSFQRFWASRCESDWRFSFRAFNVGIPLFMGVLAEVGWITLDNGSIGHRLAAGMISIIALTSGLVFYAYTYRKWGPFL 768
            GM MADMAW +KCREEDM+ R     XXXXXXXXXXXXX              VA+  AL AGF++V LVE +IP  +N  LL  FGS  A+ + L L++ L+ST++LVAI++YD   +D     F  FW  RCE DW+ + R F+ G+P F+ V++ V W+T      G  ++A +++ I++   L ++  T RKW  FL
Sbjct:    7 GMEMADMAWEVKCREEDMKQRALENEXXXXXXXXXXXXXKAQQLQV-------VANQGALFAGFSMVVLVESSIPEALNGALLAVFGSAVAMTIALFLVSTLNSTYILVAILRYDCVRRDVP---FSEFWNKRCEPDWKIALRCFSYGVPSFLLVVSLVAWVTFWEAESGF-VSASVVTTISMAVTLFWFGRTDRKWRGFL 196
[Close]
BLAST of mRNA_P-fluviatile_contig13.1735.1 vs. uniprot
Match: A0A7S1BSJ4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BSJ4_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.490e-30
Identity = 96/198 (48.48%), Postives = 130/198 (65.66%), Query Frame = 1 
Query:  166 GMGMADMAWNIKCREEDMEFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASLSALIAGFALVALVEINIPSDVNAVLLVFFGSTAALVVGLMLLAMLSSTFMLVAIMKYD-VKAKDPDYPSFQRFWASRCESDWRFSFRAFNVGIPLFMGVLAEVGWITLDNGSIGHRLAAGMISIIALTSGLVFYAYTYRKW 756
            GM +ADMAW +KCREEDM+ R XXXXXXXXXXXXXXXXX              V+ LSALIAGFA+V LVEI+IP +    LL+ FG   ++V+ LML+AML++  MLVAI KYD ++ + P    F  FW  RCE+D+ ++ RAF +G+P+F+ VL  VGW+   +   G   ++ + +I   T GL ++ +T RKW
Sbjct:    8 GMEVADMAWEVKCREEDMKQRSXXXXXXXXXXXXXXXXXKSQQLKA-------VSHLSALIAGFAMVVLVEISIPENFPGPLLMAFGVATSIVISLMLVAMLNACLMLVAINKYDCIRREIP----FNVFWRKRCETDFVYALRAFLLGVPVFICVLGLVGWVVFWDRDWGVACSSSVTAIAVATVGL-WFGHTERKW 193
[Close]
BLAST of mRNA_P-fluviatile_contig13.1735.1 vs. uniprot
Match: A0A7S2CAC6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CAC6_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.170e-26
Identity = 58/133 (43.61%), Postives = 87/133 (65.41%), Query Frame = 1 
Query:  412 LVFFGSTAALVVGLMLLAMLSSTFMLVAIMKYDVKAKDPDYPSFQRFWASRCESDWRFSFRAFNVGIPLFMGVLAEVGWITLDNGSIGHR-LAAGMISIIALTSGLVFYAYTYRKWGPFLSNAKLDLHIIQDQ 807
            L+ FG+T+ALVVGLML+AML+ T ML+AI+KYD   ++P    F  FW   CE DW F++R+F  G+PLFM VLA++GWI         R L A  I+ +A  +  +++ +T  KWG F+ +A  D+ ++Q++
Sbjct:    1 LMLFGTTSALVVGLMLIAMLNCTMMLIAILKYDCVNRNPP---FHTFWRVHCEDDWHFAYRSFTFGLPLFMCVLAQIGWIQFHKYDDSTRNLGASAITFVAAVTFSLWFLHTKSKWGNFIRDA--DVKLVQEE 128
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G860_ECTSI4.660e-8582.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C9P0_9STRA1.870e-4543.50Calcium release-activated calcium channel protein ... [more]
A0A6S9GQE6_9STRA7.340e-4552.38Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4NBN3_9STRA1.050e-4450.48Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A6U0JNC6_9STRA3.120e-4450.47Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2S1Q7_9STRA2.650e-4043.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B8BUZ2_THAPS9.590e-3648.89Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
K0S0L8_THAOC8.340e-3143.78Uncharacterized protein n=2 Tax=Thalassiosira ocea... [more]
A0A7S1BSJ4_9STRA1.490e-3048.48Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2CAC6_9STRA1.170e-2643.61Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:1174643..1180109 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score265.0
Seed ortholog evalue3.5e-68
Seed eggNOG ortholog2880.D7G860
KEGG koko:K16056
KEGG TC1.A.52.1.1
KEGG Pathwayko04020,ko04024,ko04611,ko04924,ko04925,ko04927,ko04934,ko05340,map04020,map04024,map04611,map04924,map04925,map04927,map04934,map05340
EggNOG free text desc.Mediator of CRAC channel activity
EggNOG OGs2AXBY@1,2S00K@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCalcium release-activated calcium channel protein
Ec32 orthologEc-12_001380.1
Exons7
Model size1036
Cds size750
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815554.5654836-UTR-P-fluviatile_contig13:1174642..11747931622815554.5654836-UTR-P-fluviatile_contig13:1174642..1174793Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1174643..1174793 -
1693562229.611936-UTR-P-fluviatile_contig13:1174642..11747931693562229.611936-UTR-P-fluviatile_contig13:1174642..1174793Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1174643..1174793 -
1622815554.6913412-UTR-P-fluviatile_contig13:1179974..11801091622815554.6913412-UTR-P-fluviatile_contig13:1179974..1180109Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1179975..1180109 -
1693562229.9105837-UTR-P-fluviatile_contig13:1179974..11801091693562229.9105837-UTR-P-fluviatile_contig13:1179974..1180109Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1179975..1180109 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815554.581724-CDS-P-fluviatile_contig13:1174793..11750711622815554.581724-CDS-P-fluviatile_contig13:1174793..1175071Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1174794..1175071 -
1693562229.836334-CDS-P-fluviatile_contig13:1174793..11750711693562229.836334-CDS-P-fluviatile_contig13:1174793..1175071Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1174794..1175071 -
1622815554.5946002-CDS-P-fluviatile_contig13:1175882..11759261622815554.5946002-CDS-P-fluviatile_contig13:1175882..1175926Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1175883..1175926 -
1693562229.8480418-CDS-P-fluviatile_contig13:1175882..11759261693562229.8480418-CDS-P-fluviatile_contig13:1175882..1175926Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1175883..1175926 -
1622815554.6096885-CDS-P-fluviatile_contig13:1176683..11768021622815554.6096885-CDS-P-fluviatile_contig13:1176683..1176802Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1176684..1176802 -
1693562229.8579159-CDS-P-fluviatile_contig13:1176683..11768021693562229.8579159-CDS-P-fluviatile_contig13:1176683..1176802Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1176684..1176802 -
1622815554.6224306-CDS-P-fluviatile_contig13:1177130..11771831622815554.6224306-CDS-P-fluviatile_contig13:1177130..1177183Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1177131..1177183 -
1693562229.8743699-CDS-P-fluviatile_contig13:1177130..11771831693562229.8743699-CDS-P-fluviatile_contig13:1177130..1177183Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1177131..1177183 -
1622815554.6401246-CDS-P-fluviatile_contig13:1177786..11779191622815554.6401246-CDS-P-fluviatile_contig13:1177786..1177919Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1177787..1177919 -
1693562229.8831604-CDS-P-fluviatile_contig13:1177786..11779191693562229.8831604-CDS-P-fluviatile_contig13:1177786..1177919Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1177787..1177919 -
1622815554.6565824-CDS-P-fluviatile_contig13:1178619..11787031622815554.6565824-CDS-P-fluviatile_contig13:1178619..1178703Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1178620..1178703 -
1693562229.8915646-CDS-P-fluviatile_contig13:1178619..11787031693562229.8915646-CDS-P-fluviatile_contig13:1178619..1178703Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1178620..1178703 -
1622815554.6782837-CDS-P-fluviatile_contig13:1179935..11799741622815554.6782837-CDS-P-fluviatile_contig13:1179935..1179974Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1179936..1179974 -
1693562229.9007328-CDS-P-fluviatile_contig13:1179935..11799741693562229.9007328-CDS-P-fluviatile_contig13:1179935..1179974Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1179936..1179974 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1735.1prot_P-fluviatile_contig13.1735.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 1174794..1179974 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1735.1

>prot_P-fluviatile_contig13.1735.1 ID=prot_P-fluviatile_contig13.1735.1|Name=mRNA_P-fluviatile_contig13.1735.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=250bp
MDLLGALGSGGMGMADMAWNIKCREEDMEFRRRELQWRKEEVWWRGVNDR
KREVEEKAKQLEQVASLSALIAGFALVALVEINIPSDVNAVLLVFFGSTA
ALVVGLMLLAMLSSTFMLVAIMKYDVKAKDPDYPSFQRFWASRCESDWRF
SFRAFNVGIPLFMGVLAEVGWITLDNGSIGHRLAAGMISIIALTSGLVFY
AYTYRKWGPFLSNAKLDLHIIQDQPSRHHAGHPSGGGGSREAGLVAART*
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mRNA from alignment at P-fluviatile_contig13:1174643..1180109-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1735.1 ID=mRNA_P-fluviatile_contig13.1735.1|Name=mRNA_P-fluviatile_contig13.1735.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5467bp|location=Sequence derived from alignment at P-fluviatile_contig13:1174643..1180109- (Porterinema fluviatile SAG_2381)
GAACGATTCTCGGGATCGTCGGGATCTTCGACTACAGCCTAAATCTCCGA
CAGTGGTTATGCCGCATCCTCCCTCCCGTACACAAACGGCCATCGCAACG
CTGACATCTTCGGGGACAACGCACTCTCGAGGACGATGGACCTGTTAGGA
GCACTAGGGAGTGGAGGAATGGGGGTGAGGCCCTTTATGCATGATCATGC
CTGATAAGGGTCTGTTTCACTGCTGTTATCGCCGTTCCACGACACTTGCG
CACGCTCTACTTGCTACTCTCTCGACACCCTCTTCCGCGTGATTCCTGGT
CTCTCACGTTACAGGTTCAAATCAATGCAAGTCATGCATCAGTACTAGCA
CGCAAGCCCATCCGGTTTGCTTCGGTTCATGTGGCTTCGCTACCGATGGA
CGCAGCGAGAGACGAGAGCCCTGATCTCCGAACGTGTTGAATCTAATCTC
ACGTCTCGGACAAGAGACCAGCCCTGATCTCCGAACATTGTTGAATCTAG
TCTAACGTCTCTGACTATAGGTGCGCAGGAAACCTGCCATACGTCGAGTA
GTGGGTGCATTGATGTCATATTCCGGACCCAAGCACTGCAAGATGCACGG
CTTGCAACAAGAGATGACTGTGAAAACTCGATGGAGGGAGAAAGGCAGGC
ATGCCGGCGGGCATGTGATCAGGTACACACGCACCCAATTTTTTGGCATG
AGTTGGGTGGGTGGGGGTGATGGGACACACGTCGCGAAGAACCGGGACCT
CGACCGAGCCGCTTGTTCTTGAGTCGAGCAGCCGTGAAGGGCGCTCACGC
ACACACGCTGATAACGTGCAGCGTACACCATCACCAGCACCAGCACCAGC
AGCACGTGCAGCACAGCCACTGCAGCACCCGCACCAGCACCAGCGCAAAG
CACTACATAGCAGCGGTGTCAACAACACGTTGAAGCAACAGCAGCAGAAC
AGCGTTAACGGCAGCAAGAGCTACAAGAGCAGCAAGAACGACAACAGCGG
GTGCCAGCACGTGTTGGACAGTGGGTTGTTTGGCGCAACGCCTTCATTGC
AGGTTTTCTGTGTTTGGTATCGAACTCAAACTAACCACAAATATGCTGTG
TGGTTTGAACGGGAGGTGGCGGGATCCCCTCGTGGGACACTTGAGCAATG
AGACCAGGTGCACGACTGCACTTTCAGAAATGGCGGGAAACGACTTCCGA
ACATCGAATCAGTTGGTTCCCTGCCTTGTGAAGCTAGACAGGCGAACAAG
ATTGCAAAACTTTGCTGTCACTTCCCGTGGGGTTTTTATGGTCGGAGCCA
ACATCCCACTGACAAAAAAATATTGATCTTCTCGCTGAGCGACATCGCTT
GTTTGTCTACTTGCGTATGTGCGCACACCCCGTCGATCGATTTCGATGGG
AGGCAGATGGCCGACATGGCGTGGAATATCAAGTGCCGGGAGGAGGACAT
GGAGTTTCGAAGAAGAGAGCTGCAGTGGCGAAAAGAGGAGGTGCGTTTGT
CGTGCGGCTATGCAACCATGATCGAGAGATCCGCTACATGGTACTCCGGA
GTATTTTTTTATTTCCGTAATTGGTGCTGCTTGGACGGTTTGAAAATTGA
GATGGGAACCTTCACGATTTGGATTTGAAGCCCGCATCCGCAAAAGTCGC
AGAAACTTTGCTCCGGTCCAATGTCAACTTCTGCATCAACATCGCGACAG
CGATAGCAAAAACAGTACCAGCATCAGCTGCTCCAACTCTCCCTCTCGTC
TACTCAGGGAGTCGGACTGTGCGCGAGAGTGATCGGCTAACAAAGAAGTG
AGTGAACGAGGGCGATGCGATGAGGCACTGAGCTGGCCCTTCATGTTGCC
GTACTGCTACGGCAAGGCACTCTTGATCTTCTTCCCACGCCTGGTCAAGA
ACGACGATCCCGGTGTCGGGCTCGGGTGCATGGATCTCAAGATCGTTGCC
ATTACAAACGTTCAAACCTCGGATGGGGCACGCCTTGTGGATCGAAGTGC
TGTTGACAAAAACAAGCGCCCCATGGGCTCCAAGCAAGCGATTACAGACA
GCCGTGCGGGGCGTGGGGCGTGCGCGTGAGGGTACTCGCCTCCTTCGAGG
CAACCGAGCTTGTTTGCCCCGCATCTTCCAGATTGACTGGGTATAGCAGC
AGGCAGGGACACATTTCTACCCGCGTGCATCTTCTTTCAGGTCTGGTGGC
GAGGGGTCAACGACCGAAAACGCGAGGTGGAGGAGAAGGCGAAGCAGCTG
GAGCAAGTAGCGTCGCTGTCGGCCCTCATCGCCGGGTTCGCGCTGGTGGC
CCTGGTTGAGATCAACATCCCAAGTGCGACAGATTCAGATATGAAAAAAC
CAAAGTTTGCCACGTTTGAGATTCCGTCGTGGCTTTTGCAGCAGTGCCAG
CGGTTAAGGGTGAATGCGCGCTTGCGTGCGGTATGTCTGCGCCCGTATCC
CCCGAAACTCCGAACGCAGCGCCGACAGATGTGCACACCGAAGTCGGTGA
GGTCGGTGTGCGTGCTTGCGTGCATGTGTGCGAGTGTGTGCGTGCGTTGT
CCCCCGCCGGAGCAGTATCTCGCGTTGTTCACCCTGGCGGCTGGCGGTTC
AACATGCCAACGGCGTCGTGTTTGTGCGGGTGCCGTTGTGCGCGGGTTTT
TTCCATCCCGTTCGTCTCCGACCTTGAACATTCGTGTCGGTTGTCAAGTC
TTTTGGGGGGTCCCGGGGCTTCGAGGGGCTGGGATGATGTCGCCCCGCGA
GGGACACAAGTGCTGATTTTTCCGCTTCGGTTGGCACTGGTAAACCTCGT
GACCGCGCGTCCAAGCTCCACCCTGCACTTTCCATCGCTTTGCGTGCGCG
CCTGCCTTTGTGGTCAGCCCGCAAAATCGCACCAACAACCACGCTTCTCT
TTCTTTATTGTTCCGTCCGTTGCCAGGTGACGTGAACGCGGTGCTGCTGG
TCTTCTTCGGGTCTACGGCGGCGTTAGTGGTGAGCTACCGTAAATGAGAC
GCAATACACCACAAACCCAGGACAGGCTTTCCAAAAGGTCGATTTCTCTA
CCACAAGCGTCTGCTGGTGCTAAACATCCGGCGGTTGTACGGTCTTTCGA
AAAATATTTCCGTCGATGCATCGACAAGTATCGGCATTTTCGATGGCGTG
GAAAAATGGAGCGTTGAAAATGGGTCCAGGGAGTGTGCTAAATTGTGTCG
CTCACGCGTTCTTGAGCCCTCGCATCAAGCAGGGTGACGAAAACGCAGGT
GAAAAATGATCTCCACGCGCGCGCATGCATGCAACGACGAATATACGAAC
ACAACAGGTCGGGTTGATGCTGCTGGCGATGTTGAGTTCGACCTTCATGC
TGGTGGCCATCATGAAGTACGACGTCAAGGCCAAGGACCCCGACTACCCT
TCCTTCCAACGTTTCTGGGCCAGCAGGTGAGATTATCGCCGGCAGTCATA
TGGCGGGGGCTGCGGAAGGAGGGAATACCGCGGGGGATGGGGGGAGCCGT
GAGGTGGCTCACGTGCACAATCGCTTCAGACAGACAAAAAATGAAAGCTG
AGAGAGAGCTAAAGTGCACGTTTGCTTGAGAAATACATTTGAGAGGGAGA
GCTTTCCCGCCCGAGGCAAGTATGCCGGCGGGTGTTGTATCGTGGGCGCT
CAAGCCCCTCTGACAGGGTGGGTTACAAACGTTGTCGCAGCAGTAGCAGC
AACACGCACACACGTGGAGGGCGTCGGAGGCATCATTTTTCGCCGAGGCG
GCTTTTCTCGGATCCGACATGCGGCGGCAGCGGCGGCGGCGGCGGCGGCG
GCTGTGGGCCCGTGGGGTGAGGCGACCACGACGGGCAAGATGACGCTCCA
GAGCGCCTCGCTAACGCTGATGCAAACCGCCACGGATGTGTCGGCCCCCG
GATGCACACGGTCGAGGGCTGCTTTTGTTAGCTTTGCTCGGCGAGACACT
GCTGATTGTCTGTCTATCTGTCTGTTGTGTCTGTCTGTTCTCTGCGCGTC
TGACCATTTGCTTCTGTGCCTGCCGTCATTCGTCTGACTGCCTGCTTTTC
ATTCTCTCTTGAAATCATTTACTCGCCACTGCTGGTGTGTGCGATTTTTT
GTCCTCGTCTCCGAGTCGCTGGATGTATTCAGAACAAAACATATTGGTCG
TGGTGCTGTCACCGCCCCTGCTGCCGATTCCAGGTGCGAGAGCGACTGGC
GGTTCAGTTTCAGGGCCTTCAACGTGGGTAAGAAAGCCGAGACAATAAAG
GGCACAAAATGGTGCCTTGGAGCAAGCACTTGCCGAGTGTTTGTGAAAGG
TGTTCGTTCCTGCGCAAATCTCACGACTGTTTGCTGCAGAAGTAACCTCC
TTGCTGCCGCATACAGTGCCCGGTCGCTGCCCTTTTGTCCTCTCGCGGCG
TCAGATTTCAGCGGAATTGTAAGGCGGCGCGTCTGGTGGCTTGTTTAGCC
TACAATTCTGAGTTGTTGAAACTATCCATGCATGCCACGCCAGCCGTCGC
AGCACTGGGTCTTTCTGCCATCTGCTGTCGTGCGTTCCTCGTCGAAAGAT
ACCCCCGGCAACCCAGGCACGGTTTGCAGCATCCCGAAGCAATGGTGTTC
ATGAGATCCGTTTTAATTTGATTTGATATGACTAAAATTTAGGCTGTATA
GCAGGAAACACTACAGTTTTTCTCACTTTCTCTCTTTCTGCCTCTCTCCC
TCTCTCTCGTTCTCTCTCTCTGCATGGATTATTGCGAATGCGGAGCGTTC
TTCTAGGGTTGGTCTGCGGTAATAAGAGTTGTCAGACAAATCAAAGGCCC
ATGGAAGCGGAGGCGATCCAAATGACCGCTCGCAACGGCCTTCGTGGAAG
GCTGCCTGCCGCGACATTTCACACTCCGATCTTACCTTCCCCACAACCTC
CCACCGCATACTCAAATCGCTGGCGAGACCGTACCCGTTTCGCAGGGAAC
GCGAAGGCGCTCTGACACCAAACAGCACACCTCACAAACCTCCTCCTCAC
TCCATTCAGTTGCTCCAACGCTTCTTCTCTCCTTGCAGGAATCCCCCTGT
TTATGGGCGTGCTGGCGGAGGTCGGCTGGATAACCCTCGACAACGGCTCC
ATCGGCCACCGCCTCGCCGCCGGCATGATCTCGATCATCGCGCTAACTTC
GGGGCTCGTGTTCTACGCCTACACCTACCGAAAGTGGGGGCCCTTCTTGT
CGAACGCGAAGCTCGACCTGCACATCATCCAGGACCAGCCAAGCCGTCAC
CACGCCGGCCACCCGAGCGGCGGCGGCGGCAGCCGGGAGGCGGGATTGGT
TGCCGCAAGAACGTGATGAACAGATTGATGTGTGCAAGGTTTTGGTGGTG
TTTGTCTGGAGGACGATAGCCCTTGGGGTTTGGAGTGGCCAGCGGCCGCT
GGTTTACGGCGTTGGGGCAAGAGTTTTCGCCCAGGCCGTTGCTTTTGATT
CCTAGAGCATGCTGGTG
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:1174643..1180109-

>mRNA_P-fluviatile_contig13.1735.1 ID=mRNA_P-fluviatile_contig13.1735.1|Name=mRNA_P-fluviatile_contig13.1735.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1500bp|location=Sequence derived from alignment at P-fluviatile_contig13:1174643..1180109- (Porterinema fluviatile SAG_2381)
ATGGACCTGTTAGGAGCACTAGGGAGTGGAGGAATGGGGATGGACCTGTT
AGGAGCACTAGGGAGTGGAGGAATGGGGATGGCCGACATGGCGTGGAATA
TCAAGTGCCGGGAGGAGGACATGGAGTTTCGAAGAAGAGAGCTGCAGTGG
CGAAAAGAGGAGATGGCCGACATGGCGTGGAATATCAAGTGCCGGGAGGA
GGACATGGAGTTTCGAAGAAGAGAGCTGCAGTGGCGAAAAGAGGAGGTCT
GGTGGCGAGGGGTCAACGACCGAAAACGCGAGGTGGAGGAGAAGGCGAAG
CAGCTGGAGCAAGTAGCGTCGCTGTCGGCCCTCATCGCCGGGTTCGCGCT
GGTGGCCCTGGTTGAGATCAACATCCCAAGTCTGGTGGCGAGGGGTCAAC
GACCGAAAACGCGAGGTGGAGGAGAAGGCGAAGCAGCTGGAGCAAGTAGC
GTCGCTGTCGGCCCTCATCGCCGGGTTCGCGCTGGTGGCCCTGGTTGAGA
TCAACATCCCAAGTGACGTGAACGCGGTGCTGCTGGTCTTCTTCGGGTCT
ACGGCGGCGTTAGTGGTGACGTGAACGCGGTGCTGCTGGTCTTCTTCGGG
TCTACGGCGGCGTTAGTGGTCGGGTTGATGCTGCTGGCGATGTTGAGTTC
GACCTTCATGCTGGTGGCCATCATGAAGTACGACGTCAAGGCCAAGGACC
CCGACTACCCTTCCTTCCAACGTTTCTGGGCCAGCAGGTCGGGTTGATGC
TGCTGGCGATGTTGAGTTCGACCTTCATGCTGGTGGCCATCATGAAGTAC
GACGTCAAGGCCAAGGACCCCGACTACCCTTCCTTCCAACGTTTCTGGGC
CAGCAGGTGCGAGAGCGACTGGCGGTTCAGTTTCAGGGCCTTCAACGTGG
GTGCGAGAGCGACTGGCGGTTCAGTTTCAGGGCCTTCAACGTGGGAATCC
CCCTGTTTATGGGCGTGCTGGCGGAGGTCGGCTGGATAACCCTCGACAAC
GGCTCCATCGGCCACCGCCTCGCCGCCGGCATGATCTCGATCATCGCGCT
AACTTCGGGGCTCGTGTTCTACGCCTACACCTACCGAAAGTGGGGGCCCT
TCTTGTCGAACGCGAAGCTCGACCTGCACATCATCCAGGACCAGCCAAGC
CGTCACCACGCCGGCCACCCGAGCGGCGGCGGCGGCAGCCGGGAGGCGGG
ATTGGTTGCCGCAAGAACGTGAGAATCCCCCTGTTTATGGGCGTGCTGGC
GGAGGTCGGCTGGATAACCCTCGACAACGGCTCCATCGGCCACCGCCTCG
CCGCCGGCATGATCTCGATCATCGCGCTAACTTCGGGGCTCGTGTTCTAC
GCCTACACCTACCGAAAGTGGGGGCCCTTCTTGTCGAACGCGAAGCTCGA
CCTGCACATCATCCAGGACCAGCCAAGCCGTCACCACGCCGGCCACCCGA
GCGGCGGCGGCGGCAGCCGGGAGGCGGGATTGGTTGCCGCAAGAACGTGA
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