mRNA_P-fluviatile_contig13.1718.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1718.1
Unique NamemRNA_P-fluviatile_contig13.1718.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig13.1718.1 vs. uniprot
Match: D7G2J2_ECTSI (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2J2_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 2.670e-90
Identity = 164/262 (62.60%), Postives = 179/262 (68.32%), Query Frame = 1 
Query:  613 EQRSWAVDVEADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNYAALEAEAAKTRRREEEVRKANAKNPRVFLDIEIADGTGAKSRLSKGEKVGRITFELFEDAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRIV--PKFMAQGGDITREDGSGGESIYGQTFADESFRLKHDQPGLLSMANSGRDSNNSQFFVTFGPLPWLDSKHVVFGKVVDGMEVVRMIEDCGTTSGEPTKRVQIAECGQIPDED 1392
            ++R+W VDVEADD                                     KN  AL AEAA + RR+EEVRKAN KNPRVFLDIEIAD TGAKSRL+KG+  GR+T ELFE+AVPRTAENFRALCTGEK  G      ++ G      V  P               GGESIYG TF DESF+LKHDQPGLLSMANSGRDSNNSQFF+TFGPLPWLDSKHVVFGKVV+GMEVVR IEDCGTTSGEPTKRVQIAECGQIPDE+
Sbjct:   13 KKRAWEVDVEADDKDEGDDTTPSEAFLSLQRELEEKEKIQQENAERA---KNQDALAAEAANSLRRKEEVRKANTKNPRVFLDIEIADTTGAKSRLAKGKNAGRVTLELFENAVPRTAENFRALCTGEKV-GRERESDTWCGATSRTEVKPPDLNLTAYPPCPRCSCGGESIYGPTFVDESFQLKHDQPGLLSMANSGRDSNNSQFFITFGPLPWLDSKHVVFGKVVEGMEVVRKIEDCGTTSGEPTKRVQIAECGQIPDEE 270
[Close]
BLAST of mRNA_P-fluviatile_contig13.1718.1 vs. uniprot
Match: A0A146LV45_LYGHE (Peptidyl-prolyl cis-trans isomerase (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A146LV45_LYGHE)

HSP 1 Score: 231 bits (588), Expect = 2.100e-68
Identity = 109/185 (58.92%), Postives = 139/185 (75.14%), Query Frame = 1 
Query:  826 KANAKNPRVFLDIEIADGTGAKSRLSKGEKVGRITFELFEDAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGQTFADESFRLKHDQPGLLSMANSGRDSNNSQFFVTFGPLPWLDSKHVVFGKVVDGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 1380
            K   K  RVF DIEI    G K+       VGR+TF+LF+D VP+TAENFRALCTGEK +G+SG PL +  +IFHR++P FM QGGD TR +G+GGESIYG+ FADE+FRL+HD+PGLLSMAN+G ++N SQFF+T  P PWLD KHVVFG+V DG ++V+ IE  GT +G P  R+ I +CG++
Sbjct:    6 KKRKKMKRVFFDIEI----GQKA-------VGRVTFKLFDDVVPKTAENFRALCTGEKGKGASGKPLHFKNSIFHRVIPDFMIQGGDFTRHNGTGGESIYGEKFADENFRLRHDKPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGQVEDGFDIVKKIEQQGTANGSPRTRIVITDCGEL 179
[Close]
BLAST of mRNA_P-fluviatile_contig13.1718.1 vs. uniprot
Match: A2DT06_TRIVA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Trichomonas vaginalis TaxID=5722 RepID=A2DT06_TRIVA)

HSP 1 Score: 229 bits (583), Expect = 9.250e-68
Identity = 104/181 (57.46%), Postives = 132/181 (72.93%), Query Frame = 1 
Query:  838 KNPRVFLDIEIADGTGAKSRLSKGEKVGRITFELFEDAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGQTFADESFRLKHDQPGLLSMANSGRDSNNSQFFVTFGPLPWLDSKHVVFGKVVDGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 1380
            K P+ F DI I           +G+KVG+I FELF D VP+TAENFRALCTGEK  G SG PLSY G +FHRI+P+FM QGGD TR +G+GGESIYG  F DE+F++KHD+PGLLSMAN+G ++N SQFF+T    PWLD  H VFG+V++GM++V+ IE CGT SG P     + +CG++
Sbjct:    3 KRPKTFFDISI-----------RGDKVGKIVFELFNDIVPKTAENFRALCTGEKGIGKSGMPLSYKGTMFHRIIPQFMIQGGDFTRFNGTGGESIYGMKFDDENFKVKHDKPGLLSMANAGPNTNGSQFFITTVETPWLDGHHCVFGQVIEGMDIVKQIESCGTESGRPRAMCMVTDCGEM 172
[Close]
BLAST of mRNA_P-fluviatile_contig13.1718.1 vs. uniprot
Match: A0A455B6L4_PHYMC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Physeter macrocephalus TaxID=9755 RepID=A0A455B6L4_PHYMC)

HSP 1 Score: 227 bits (579), Expect = 3.560e-67
Identity = 113/182 (62.09%), Postives = 133/182 (73.08%), Query Frame = 1 
Query:  835 AKNPRVFLDIEIADGTGAKSRLSKGEKVGRITFELFEDAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGQTFADESFRLKHDQPGLLSMANSGRDSNNSQFFVTFGPLPWLDSKHVVFGKVVDGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 1380
            AKNP+VF DI I            G+  GRI FELF++ VPRTAENFRALCTGEK RG SG PLSY G  FHRI+P+FM QGGD T  +G+GGESIYG  FADE+F LKH +P LLSMANSG ++N SQFF+T  P PWLD KHVVFGKVV+G +VV+ +E  GT SG   + V IA+CGQ+
Sbjct:    2 AKNPQVFFDITIG-----------GKPAGRIVFELFKNIVPRTAENFRALCTGEKGRGVSGKPLSYKGCSFHRIIPEFMCQGGDFTNFNGTGGESIYGMKFADENFELKHTEPFLLSMANSGPNTNGSQFFITTVPCPWLDGKHVVFGKVVEGTDVVKQMEQQGTRSGTVKQPVVIADCGQL 172
[Close]
BLAST of mRNA_P-fluviatile_contig13.1718.1 vs. uniprot
Match: UPI0018FE4581 (peptidylprolyl isomerase n=1 Tax=Streptomyces sp. NRRL F-5126 TaxID=1463857 RepID=UPI0018FE4581)

HSP 1 Score: 226 bits (576), Expect = 8.830e-67
Identity = 107/180 (59.44%), Postives = 132/180 (73.33%), Query Frame = 1 
Query:  841 NPRVFLDIEIADGTGAKSRLSKGEKVGRITFELFEDAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGQTFADESFRLKHDQPGLLSMANSGRDSNNSQFFVTFGPLPWLDSKHVVFGKVVDGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 1380
            NPRV+ D+ + D              GRITFELF D VP+TAENFRALCTGE+  G SG PL + G+ FHR++P+FM QGGD TR DG+GGESIYG  FADE+F LKHD PG+LSMAN+GR++N SQFF+   P PWLD KHVVFGKV+D ME+V+ IE  G+ +G+ TK V I+ CGQ+
Sbjct:    2 NPRVYFDMTVGDVAA-----------GRITFELFADVVPKTAENFRALCTGERGVGKSGKPLHFEGSKFHRVIPQFMCQGGDFTRGDGTGGESIYGGKFADENFDLKHDVPGILSMANAGRNTNGSQFFICTVPTPWLDGKHVVFGKVIDNMELVKTIESVGSQNGKTTKDVVISACGQL 170
[Close]
BLAST of mRNA_P-fluviatile_contig13.1718.1 vs. uniprot
Match: D6AXE0_9ACTN (Peptidyl-prolyl cis-trans isomerase n=36 Tax=Streptomyces TaxID=1883 RepID=D6AXE0_9ACTN)

HSP 1 Score: 225 bits (574), Expect = 1.790e-66
Identity = 106/180 (58.89%), Postives = 132/180 (73.33%), Query Frame = 1 
Query:  841 NPRVFLDIEIADGTGAKSRLSKGEKVGRITFELFEDAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGQTFADESFRLKHDQPGLLSMANSGRDSNNSQFFVTFGPLPWLDSKHVVFGKVVDGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 1380
            NP+VF DIE           + G  +GR+TFELF D VP+TAENFRALCTGEK  G  G PL + G+ FHR++P FM QGGD TR +G+GGESIYG+ FADE+F+LKHD PG+LSMAN+G  SN SQFF+   P PWLD KHVVFGKV+DGM+ V+ IE  G+ SG+ +  + I++CGQI
Sbjct:    3 NPQVFFDIE-----------ANGTSLGRVTFELFADVVPKTAENFRALCTGEKGNGRQGKPLHFKGSGFHRVIPGFMCQGGDFTRGNGTGGESIYGEKFADENFQLKHDTPGILSMANAGPHSNGSQFFICTEPTPWLDGKHVVFGKVLDGMDTVKAIESHGSRSGKTSATLTISDCGQI 171
[Close]
BLAST of mRNA_P-fluviatile_contig13.1718.1 vs. uniprot
Match: A0A8K0AHI2_ANDGO (Cyclophilin (Peptidylprolyl isomerase) n=1 Tax=Andalucia godoyi TaxID=505711 RepID=A0A8K0AHI2_ANDGO)

HSP 1 Score: 223 bits (569), Expect = 9.600e-66
Identity = 103/180 (57.22%), Postives = 134/180 (74.44%), Query Frame = 1 
Query:  841 NPRVFLDIEIADGTGAKSRLSKGEKVGRITFELFEDAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGQTFADESFRLKHDQPGLLSMANSGRDSNNSQFFVTFGPLPWLDSKHVVFGKVVDGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 1380
            NPRVF D+ I             +  GRI FELF + VP+TAENFR+LCTGEK  G SG PL Y G+IFHR++P+FMAQGGD TR +G+GGESIYG+ FADE+F+LKHD+PGLLSMAN+G  +N SQFF+TF   PWLD KHVVFG+VV+G E++  +E  G+ SG+    +++++CGQ+
Sbjct:    3 NPRVFFDLSI-----------NNQPAGRIVFELFANIVPKTAENFRSLCTGEKGTGKSGKPLHYKGSIFHRVIPQFMAQGGDFTRGNGTGGESIYGEKFADENFKLKHDKPGLLSMANAGPGTNGSQFFLTFVECPWLDGKHVVFGQVVEGKELLPKLESLGSQSGKTKVPIEVSDCGQL 171
[Close]
BLAST of mRNA_P-fluviatile_contig13.1718.1 vs. uniprot
Match: A0A388MFL0_CHABU (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388MFL0_CHABU)

HSP 1 Score: 223 bits (568), Expect = 1.390e-65
Identity = 107/180 (59.44%), Postives = 130/180 (72.22%), Query Frame = 1 
Query:  841 NPRVFLDIEIADGTGAKSRLSKGEKVGRITFELFEDAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGQTFADESFRLKHDQPGLLSMANSGRDSNNSQFFVTFGPLPWLDSKHVVFGKVVDGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 1380
            NP VF DI I            G KVGRI  EL+++ VPRTAENFRALCTGEK  G SG PL Y G  FHR++PKFM QGGD TR DG+GGESIYG  FADE+F+ KH +PG+LSMAN+G ++N SQFF+   P PWLD KHVVFGKV+ GM+VV  +E  G++SG  ++ V IA+CGQ+
Sbjct:    3 NPTVFFDITIG-----------GRKVGRIVMELYKNVVPRTAENFRALCTGEKGTGRSGRPLHYKGCTFHRVIPKFMCQGGDFTRGDGTGGESIYGAKFADENFQHKHTEPGVLSMANAGPNTNGSQFFLCTVPTPWLDGKHVVFGKVIQGMDVVAKVESVGSSSGRTSQPVVIADCGQL 171
[Close]
BLAST of mRNA_P-fluviatile_contig13.1718.1 vs. uniprot
Match: A0A0G4FPL4_VITBC (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FPL4_VITBC)

HSP 1 Score: 223 bits (569), Expect = 2.050e-65
Identity = 105/182 (57.69%), Postives = 131/182 (71.98%), Query Frame = 1 
Query:  835 AKNPRVFLDIEIADGTGAKSRLSKGEKVGRITFELFEDAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGQTFADESFRLKHDQPGLLSMANSGRDSNNSQFFVTFGPLPWLDSKHVVFGKVVDGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 1380
            A NP+V+ DI I            G  +GR+TF L+ D VP+TAENFRALCTGEK +G S  PL Y G+ FHRI+P FM QGGD T  DG GGESIYG  FADE+F++KH + GLLSMAN+G ++N SQFF+T    PWLD KHVVFG+V +G +VV+ +E  GT SG PT++VQIA+CGQ+
Sbjct:   24 AANPKVWFDISIG-----------GRAMGRVTFLLYADVVPKTAENFRALCTGEKGKGQSQVPLHYKGSYFHRIIPHFMCQGGDFTEGDGRGGESIYGMKFADENFKIKHSKKGLLSMANAGPNTNGSQFFITVDETPWLDGKHVVFGEVTEGYDVVQQMERVGTRSGTPTQKVQIADCGQL 194
[Close]
BLAST of mRNA_P-fluviatile_contig13.1718.1 vs. uniprot
Match: UPI001684B3C2 (peptidylprolyl isomerase n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI001684B3C2)

HSP 1 Score: 222 bits (565), Expect = 4.060e-65
Identity = 108/180 (60.00%), Postives = 129/180 (71.67%), Query Frame = 1 
Query:  841 NPRVFLDIEIADGTGAKSRLSKGEKVGRITFELFEDAVPRTAENFRALCTGEKPRGSSGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESIYGQTFADESFRLKHDQPGLLSMANSGRDSNNSQFFVTFGPLPWLDSKHVVFGKVVDGMEVVRMIEDCGTTSGEPTKRVQIAECGQI 1380
            NP+VF D+ I            G+  GRI  EL  D VP TAENFRALCTGEK  GSSG PL Y G+ FHR++P FM QGGD T+ +G+GGESIYG+TFADE+F+LKH  PGLLSMAN+G  +N SQFF+T    PWLD KHVVFG VV+GM+VVR IE  GT SG+  + V IA+CGQ+
Sbjct:    6 NPKVFFDVTIG-----------GQPAGRIVMELRADVVPETAENFRALCTGEKGTGSSGKPLHYKGSSFHRVIPNFMCQGGDFTQGNGTGGESIYGRTFADENFQLKHTTPGLLSMANAGPGTNGSQFFLTTVETPWLDGKHVVFGAVVEGMDVVRAIEQVGTPSGKTRQSVVIADCGQL 174
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2J2_ECTSI2.670e-9062.60PPIase cyclophilin-type domain-containing protein ... [more]
A0A146LV45_LYGHE2.100e-6858.92Peptidyl-prolyl cis-trans isomerase (Fragment) n=1... [more]
A2DT06_TRIVA9.250e-6857.46Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tricho... [more]
A0A455B6L4_PHYMC3.560e-6762.09Peptidyl-prolyl cis-trans isomerase n=1 Tax=Physet... [more]
UPI0018FE45818.830e-6759.44peptidylprolyl isomerase n=1 Tax=Streptomyces sp. ... [more]
D6AXE0_9ACTN1.790e-6658.89Peptidyl-prolyl cis-trans isomerase n=36 Tax=Strep... [more]
A0A8K0AHI2_ANDGO9.600e-6657.22Cyclophilin (Peptidylprolyl isomerase) n=1 Tax=And... [more]
A0A388MFL0_CHABU1.390e-6559.44Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chara ... [more]
A0A0G4FPL4_VITBC2.050e-6557.69Peptidyl-prolyl cis-trans isomerase n=2 Tax=Vitrel... [more]
UPI001684B3C24.060e-6560.00peptidylprolyl isomerase n=1 Tax=Pseudanabaena sp.... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:999807..1004016 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score293.9
Seed ortholog evalue1e-76
Seed eggNOG ortholog2880.D7G2J2
KEGG koko:K01802
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0865@2759
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCyclophilin-like domain
Ec32 orthologEc-12_001720.1
Exons6
Model size2062
Cds size1092
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1718.1prot_P-fluviatile_contig13.1718.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 1000329..1003568 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815551.7568963-UTR-P-fluviatile_contig13:999806..10003281622815551.7568963-UTR-P-fluviatile_contig13:999806..1000328Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 999807..1000328 +
1693562225.5385232-UTR-P-fluviatile_contig13:999806..10003281693562225.5385232-UTR-P-fluviatile_contig13:999806..1000328Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 999807..1000328 +
1622815551.8770757-UTR-P-fluviatile_contig13:1003568..10040161622815551.8770757-UTR-P-fluviatile_contig13:1003568..1004016Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1003569..1004016 +
1693562225.6181483-UTR-P-fluviatile_contig13:1003568..10040161693562225.6181483-UTR-P-fluviatile_contig13:1003568..1004016Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 1003569..1004016 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815551.7726922-CDS-P-fluviatile_contig13:1000328..10006191622815551.7726922-CDS-P-fluviatile_contig13:1000328..1000619Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1000329..1000619 +
1693562225.5515678-CDS-P-fluviatile_contig13:1000328..10006191693562225.5515678-CDS-P-fluviatile_contig13:1000328..1000619Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1000329..1000619 +
1622815551.78666-CDS-P-fluviatile_contig13:1001290..10014761622815551.78666-CDS-P-fluviatile_contig13:1001290..1001476Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1001291..1001476 +
1693562225.5615575-CDS-P-fluviatile_contig13:1001290..10014761693562225.5615575-CDS-P-fluviatile_contig13:1001290..1001476Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1001291..1001476 +
1622815551.807414-CDS-P-fluviatile_contig13:1001852..10019591622815551.807414-CDS-P-fluviatile_contig13:1001852..1001959Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1001853..1001959 +
1693562225.5740144-CDS-P-fluviatile_contig13:1001852..10019591693562225.5740144-CDS-P-fluviatile_contig13:1001852..1001959Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1001853..1001959 +
1622815551.824106-CDS-P-fluviatile_contig13:1002482..10025741622815551.824106-CDS-P-fluviatile_contig13:1002482..1002574Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1002483..1002574 +
1693562225.5849931-CDS-P-fluviatile_contig13:1002482..10025741693562225.5849931-CDS-P-fluviatile_contig13:1002482..1002574Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1002483..1002574 +
1622815551.8434172-CDS-P-fluviatile_contig13:1002793..10028761622815551.8434172-CDS-P-fluviatile_contig13:1002793..1002876Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1002794..1002876 +
1693562225.6004934-CDS-P-fluviatile_contig13:1002793..10028761693562225.6004934-CDS-P-fluviatile_contig13:1002793..1002876Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1002794..1002876 +
1622815551.8584883-CDS-P-fluviatile_contig13:1003235..10035681622815551.8584883-CDS-P-fluviatile_contig13:1003235..1003568Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1003236..1003568 +
1693562225.6094081-CDS-P-fluviatile_contig13:1003235..10035681693562225.6094081-CDS-P-fluviatile_contig13:1003235..1003568Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 1003236..1003568 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1718.1

>prot_P-fluviatile_contig13.1718.1 ID=prot_P-fluviatile_contig13.1718.1|Name=mRNA_P-fluviatile_contig13.1718.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=364bp
MWRSGCYSSMLVCCIICHHAGVIRVCCHLCEQRSWAVDVEADDNDDGDGS
GATAPSEAFLSLQKELEEKEKIQRENEERKKNYAALEAEAAKTRRREEEV
RKANAKNPRVFLDIEIADGTGAKSRLSKGEKVGRITFELFEDAVPRTAEN
FRALCTGEKPRGSSGFPLSYLGNIFHRIVPKFMAQGGDITREDGSGGESI
YGQTFADESFRLKHDQPGLLSMANSGRDSNNSQFFVTFGPLPWLDSKHVV
FGKVVDGMEVVRMIEDCGTTSGEPTKRVQIAECGQIPDEDVECEEDEAEA
GERNKRKAGEAGEEEEEHAVIEGAEGGRRRGKKRSRVRFAERGDGDDGGG
ASEGDPDGGEVSK*
back to top

mRNA from alignment at P-fluviatile_contig13:999807..1004016+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1718.1 ID=mRNA_P-fluviatile_contig13.1718.1|Name=mRNA_P-fluviatile_contig13.1718.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4210bp|location=Sequence derived from alignment at P-fluviatile_contig13:999807..1004016+ (Porterinema fluviatile SAG_2381)
AGCTGGCACACCCTGCTGCTGTTTATATACATATTGGCTTTATGTTTCGT
CGCAAACCCAACAAACCAGAGGTAAAGAAGAAGGTGAGAGTCAAGCGAGA
TACATCATAGGAGGAGCGCATTGAGGGGGGGTACCACCTGCGGTACATGC
TGTGTTTTTTGGACACATGAAGGTACGTTCGCCGTTTTTTTGAACGAAAA
TGGCAAGTAAAACATCAGACGAGGATCCCACGGTGTGACGGGGACACACG
ATGTCGTTTGTATTCACTAACAGTTCGAAGATGTTGCGCAAACGCTCGGC
GGGAACACAACCGCACAAACAATCTCGTCGTTGACTTACCGTTTTTTTTG
GCTCAACGGTCTGCACCTCCACAACTGGCCATAACCCATCCAGGTAGAGA
TAAGCGCAGACACACGTCGAATCTCTCACTGTGCCAACAAATTCGAAATC
CATTTGTTGTCCAGGACTCAGTCATCGAAGACTTGTTCCGGTTTTTGCCA
GCAAGAATCGCAGAGGTGTGTCATGTGGAGGAGTGGGTGTTATTCGAGTA
TGCTTGTCTGTTGTATAATCTGTCATCATGCAGGAGTGATCCGAGTATGT
TGTCATCTTTGTGAGCAGAGATCATGGGCAGTGGACGTCGAAGCGGACGA
TAATGATGACGGCGACGGGAGCGGTGCTACTGCTCCAAGCGAGGCTTTCC
TCTCCCTGCAGAAAGAACTCGAGGAAAAGGAAAAGATCCAGAGGGAGAAC
GAGGAGCGGAAGAAGAACTACGCCGCGTTGGAGGCAGAGGCGGCCAAGAC
CCGACGGAGAGAGGTGAGCAGCGCGGAACGATGGATTTACCCGATACAAA
CATGCATGGGCGCGATCCAGCGTCGACGACGATGAGATAAAAACGGGGCA
ATCGCACAAACCTCGCGCCTCCGAACCTGGCAGTGCCGGACAGGCGCTTG
TGTTTCTGAGGAGTGGACGCGGGGTCACTTTCGTGTGCCAATGCTGGTGT
CGTTTTGGTTCATTCTGAATGAGAACCAACCAACCTCCGAGCGATCCCGC
TGCATGAGATTTGGCATTTTTTTTGCCCGCCGCACAGGTGCTGGAAGTGC
CTGGTACGATACGCCGAAGTCATTGGCTTCTAGCCCAGGATGAATAGGTT
GTGGCGTTTGAAACCCACAACGCATCCCCGTTTTTCGCCGCGTGTTGCTC
TGGCCATGATCATGGCGATTATGGGAAGGATGCGATTTGAGCTGGGGCGC
AGTCAGCACTGGACGACTCGATATCGTCGAAGCTTACCGTCAGCGGTACA
AATATTTGGGCGCTCCTATTGTAGGCCATCCTTCACCCCAAACTGGCGGC
AAGCGTCTCAACAGAACCAAGGCGCAACACCGCAGGCCACAACGATATAC
TCAGAATTGTCCGCGAACCACTGCAGCAGCAGCTGCGATAATGCTGTTCC
ATTTCAATCCTTTTATGACTTACCCGACGAAAAGGAGGAAGTGCGGAAGG
CCAATGCGAAGAACCCCCGCGTGTTCCTGGACATCGAGATCGCCGACGGC
ACAGGAGCGAAGAGCCGCCTGTCCAAAGGGGAAAAGGTTGGACGCATCAC
CTTTGAACTCTTCGAAGATGCCGTGCCGAGGACGGCGGAGAATTTCCGAG
CTCTCTGCACCGGCGAGAAGGTTGGTTGGCAAAAAAGGAGCTCCGCAGCA
GGGAGGTAAAACCGGTGTGGTGCCAGAACGCCGCCCTGTCTGTACTGACG
AGGGATGGGGCGAAAAGTGAGCATAAGCTTCTCAAGGCGGTGGCAGAGGG
TGTTCGCCACCCCCGGTTCCCCCTGGAGAGGGCTCGCCACACACGGGGAG
ACCGTCGTCGGTTACCACCTACACGGTTTCACCTCGACTGCGACGGTGTC
GCGTCGCTGTTTTTCTGAGGGCCTTGTCTGTCTCCACATAGTCCTTCCGC
CGTTAGGTCGTTTCCAACCCCGTCAGCGCGCCTTGTTCTGTCTCACAAAT
AATGCAATCGTCTTCTCAAACCGCAAACGGACATACCGTCGTGCAGCCGC
GAGGTTCGAGTGGATTTCCCCTCAGCTACTTGGGCAACATTTTTCACCGA
ATCGTTCCGAAGTTCATGGCGCAGGGCGGTGACATCACGAGAGAGGACGG
AAGGTGAGAGGGGCTGAGAGACACGAAAGATGAGCAGGCCTTAGAGGGGA
CAAGGGAGAGAGAGACAGACAGACAGACAGACAGACAGAGAGCGGGGTAG
AGCGAGACGGAGCCGAGTGCTCTCAGAGCCCAGGGGTGTTTGGGGCGAGG
AGAGCAAACACACAAATACATGAACTCCCGAGTGTTTCCTACCTTCGCCT
TATCCCAACAGGCCATTACAAAGTTTCGAAGCTGTACTCGGCACCAACAC
AGTGGGTGAAGAGGGAGCCGCCCTTCTCAAGGAGCTGACGCCTTTGGAAG
ACTTTGTTTACACGGATCATGTTTGCACGTCACGTGCTGGGGGCTTACTC
GCACGCTCGGAAAAGTTGGTCGACGCACTGCGGCGGTTCGAACCACAGGT
GGTGCACCAACTCGCTTGAATGTGCGACACCGTTCCACACCTCACCGTTC
TCATACGAACGTCGTTTTCCCCGCTCCACTTTCGTCGTTTGGTTTATTTC
TGTGCATTTCATCCGCGCGCTTGCAGCGGCGGTGAGTCCATCTACGGGCA
GACGTTTGCTGATGAGAGCTTTCGACTCAAGCACGACCAGCCGGGATTAC
TTTCCATGGCGAACTCAGGTATCGTTCGCAACAGAGGGCGTGGCAAAGTG
GACAAGGACTGAGACGTACACCCTGTGGCAGTCAGATCCCTCCGTCCGGA
ACCTGGAACGTCTAAGCAGACGCCGCTGGTTTTTACTCGAGTCCGCCCGG
TGCGTTTTCTTTGTCTGCGCCTGACTGTCTTCCCTACCTCTGACTGCGTC
GCCGCTTGTCTCTTCTGCGTGGGACCGCCGCGGCCAGGCCGGGACAGCAA
CAACTCCCAGTTCTTCGTCACGTTTGGCCCACTTCCGTGGTTGGACTCAA
AGCACGTCGTATTTGGCAAGGTATGACCTTCCATGGTTCCAAAAATGAAG
CAGCACCGCCTATCAGCACACGCGTATGAGTCTACGGTAACACCGGCCAA
ATTTCAACAACCAGATTGGGCTTGACGAAGATCCAGGAGAAATCATCCAG
AAGTTTGGGAGTGGCAACCGGATGCCCTTGAATCGTGTTCCCTGTCGCGT
TCTTCAACCTGGGTAGGAATTTTCCGAGTAGAGTTGCAAGGGCTCCATCC
TAGCAACCCCATCGCCCTTCCCTCCTTCCCTCCCTCCCTCTCTCTTTTGC
CACATTGCTTGCGTCGTGAGGACACCAACCTTCGCCTCACCCTCAATCGT
TCTCTGATGGAATTCTCTCTGATCTAAAGGTTGTGGATGGGATGGAAGTG
GTACGGATGATCGAAGACTGCGGTACGACCTCGGGAGAGCCGACCAAGAG
GGTGCAGATAGCGGAATGCGGACAGATTCCGGACGAGGACGTGGAATGCG
AAGAGGACGAGGCAGAAGCGGGAGAGAGGAACAAGCGGAAAGCGGGCGAG
GCAGGAGAGGAAGAGGAGGAGCACGCAGTGATCGAGGGGGCAGAGGGGGG
ACGACGACGGGGGAAGAAACGCTCAAGGGTGCGATTCGCCGAGCGGGGCG
ACGGGGATGATGGGGGCGGTGCTTCGGAGGGTGATCCCGACGGGGGCGAA
GTGTCGAAATAGGGCAGGCAGGCAGGCTGGAAGGCACAACAAGCGAGTGG
TGATTGAGGAGGAGCAGAGGGCTTCTCCGATAGGGGTACCTGATGATCTC
GCTTATTTACTAGGATGTTGTGTTTCGAACTTTGCTGTGATTGCGGTGTT
GTACGATGCGTCGACCGCTGCTCGCAAAATGTCAAGTATTTCGACTGGTT
CTGACGGATCGTGCTTCTAGAACTGCATACGGCTATTCTAGAGGCGGGGC
TGGCGAAAGTCCCTCAGGTGTTCTCATGACGGGCTTGCGCGGTAGGGATT
GGTGTTTTTTCAAGGAGCTAGTAAACGCTTCTCGTTTCGTCGGCTGTTGT
GAAGGCCGTTGCACGCACACATCGTGCCTTCTGGCTGTGCATGCATTGCC
GCGAAGACGTATGTTTGCGGTGTCTTTCAGCAGCGCTGCGGAATCCAAAC
CATTCTGATC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig13:999807..1004016+

>mRNA_P-fluviatile_contig13.1718.1 ID=mRNA_P-fluviatile_contig13.1718.1|Name=mRNA_P-fluviatile_contig13.1718.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2184bp|location=Sequence derived from alignment at P-fluviatile_contig13:999807..1004016+ (Porterinema fluviatile SAG_2381)
ATGTGGAGGAGTGGGTGTTATTCGAGTATGCTTGTCTGTTGTATAATCTG
TCATCATGCAGGAGTGATCCGAGTATGTTGTCATCTTTGTGAGCAGAGAT
CATGGGCAGTGGACGTCGAAGCGGACGATAATGATGACGGCGACGGGAGC
GGTGCTACTGCTCCAAGCGAGGCTTTCCTCTCCCTGCAGAAAGAACTCGA
GGAAAAGGAAAAGATCCAGAGGGAGAACGAGGAGCGGAAGAAGAACTACG
CCGCGTTGGAGGCAGAGGCGGCCAAGACCCGACGGAGAGAGATGTGGAGG
AGTGGGTGTTATTCGAGTATGCTTGTCTGTTGTATAATCTGTCATCATGC
AGGAGTGATCCGAGTATGTTGTCATCTTTGTGAGCAGAGATCATGGGCAG
TGGACGTCGAAGCGGACGATAATGATGACGGCGACGGGAGCGGTGCTACT
GCTCCAAGCGAGGCTTTCCTCTCCCTGCAGAAAGAACTCGAGGAAAAGGA
AAAGATCCAGAGGGAGAACGAGGAGCGGAAGAAGAACTACGCCGCGTTGG
AGGCAGAGGCGGCCAAGACCCGACGGAGAGAGGAGGAAGTGCGGAAGGCC
AATGCGAAGAACCCCCGCGTGTTCCTGGACATCGAGATCGCCGACGGCAC
AGGAGCGAAGAGCCGCCTGTCCAAAGGGGAAAAGGTTGGACGCATCACCT
TTGAACTCTTCGAAGATGCCGTGCCGAGGACGGCGGAGAATTTCCGAGCT
CTCTGCACCGGCGAGAAGGAGGAAGTGCGGAAGGCCAATGCGAAGAACCC
CCGCGTGTTCCTGGACATCGAGATCGCCGACGGCACAGGAGCGAAGAGCC
GCCTGTCCAAAGGGGAAAAGGTTGGACGCATCACCTTTGAACTCTTCGAA
GATGCCGTGCCGAGGACGGCGGAGAATTTCCGAGCTCTCTGCACCGGCGA
GAAGCCGCGAGGTTCGAGTGGATTTCCCCTCAGCTACTTGGGCAACATTT
TTCACCGAATCGTTCCGAAGTTCATGGCGCAGGGCGGTGACATCACGAGA
GAGGACGGAAGCCGCGAGGTTCGAGTGGATTTCCCCTCAGCTACTTGGGC
AACATTTTTCACCGAATCGTTCCGAAGTTCATGGCGCAGGGCGGTGACAT
CACGAGAGAGGACGGAAGCGGCGGTGAGTCCATCTACGGGCAGACGTTTG
CTGATGAGAGCTTTCGACTCAAGCACGACCAGCCGGGATTACTTTCCATG
GCGAACTCAGCGGCGGTGAGTCCATCTACGGGCAGACGTTTGCTGATGAG
AGCTTTCGACTCAAGCACGACCAGCCGGGATTACTTTCCATGGCGAACTC
AGGCCGGGACAGCAACAACTCCCAGTTCTTCGTCACGTTTGGCCCACTTC
CGTGGTTGGACTCAAAGCACGTCGTATTTGGCAAGGCCGGGACAGCAACA
ACTCCCAGTTCTTCGTCACGTTTGGCCCACTTCCGTGGTTGGACTCAAAG
CACGTCGTATTTGGCAAGGTTGTGGATGGGATGGAAGTGGTACGGATGAT
CGAAGACTGCGGTACGACCTCGGGAGAGCCGACCAAGAGGGTGCAGATAG
CGGAATGCGGACAGATTCCGGACGAGGACGTGGAATGCGAAGAGGACGAG
GCAGAAGCGGGAGAGAGGAACAAGCGGAAAGCGGGCGAGGCAGGAGAGGA
AGAGGAGGAGCACGCAGTGATCGAGGGGGCAGAGGGGGGACGACGACGGG
GGAAGAAACGCTCAAGGGTGCGATTCGCCGAGCGGGGCGACGGGGATGAT
GGGGGCGGTGCTTCGGAGGGTGATCCCGACGGGGGCGAAGTGTCGAAATA
GGTTGTGGATGGGATGGAAGTGGTACGGATGATCGAAGACTGCGGTACGA
CCTCGGGAGAGCCGACCAAGAGGGTGCAGATAGCGGAATGCGGACAGATT
CCGGACGAGGACGTGGAATGCGAAGAGGACGAGGCAGAAGCGGGAGAGAG
GAACAAGCGGAAAGCGGGCGAGGCAGGAGAGGAAGAGGAGGAGCACGCAG
TGATCGAGGGGGCAGAGGGGGGACGACGACGGGGGAAGAAACGCTCAAGG
GTGCGATTCGCCGAGCGGGGCGACGGGGATGATGGGGGCGGTGCTTCGGA
GGGTGATCCCGACGGGGGCGAAGTGTCGAAATAG
back to top