mRNA_P-fluviatile_contig13.1716.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1716.1
Unique NamemRNA_P-fluviatile_contig13.1716.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:988385..993272 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionWW domain
Ec32 orthologEc-12_001600.1
Exons3
Model size3425
Cds size483
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1716.1prot_P-fluviatile_contig13.1716.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 990157..991257 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815551.6521714-UTR-P-fluviatile_contig13:988384..9892761622815551.6521714-UTR-P-fluviatile_contig13:988384..989276Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 988385..989276 +
1693562225.3484917-UTR-P-fluviatile_contig13:988384..9892761693562225.3484917-UTR-P-fluviatile_contig13:988384..989276Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 988385..989276 +
1622815551.6731431-UTR-P-fluviatile_contig13:990121..9901561622815551.6731431-UTR-P-fluviatile_contig13:990121..990156Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 990122..990156 +
1693562225.3613288-UTR-P-fluviatile_contig13:990121..9901561693562225.3613288-UTR-P-fluviatile_contig13:990121..990156Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 990122..990156 +
1622815551.7133179-UTR-P-fluviatile_contig13:991257..9932721622815551.7133179-UTR-P-fluviatile_contig13:991257..993272Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 991258..993272 +
1693562225.5172858-UTR-P-fluviatile_contig13:991257..9932721693562225.5172858-UTR-P-fluviatile_contig13:991257..993272Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 991258..993272 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815551.6888196-CDS-P-fluviatile_contig13:990156..9902211622815551.6888196-CDS-P-fluviatile_contig13:990156..990221Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 990157..990221 +
1693562225.4924948-CDS-P-fluviatile_contig13:990156..9902211693562225.4924948-CDS-P-fluviatile_contig13:990156..990221Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 990157..990221 +
1622815551.6999035-CDS-P-fluviatile_contig13:990839..9912571622815551.6999035-CDS-P-fluviatile_contig13:990839..991257Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 990840..991257 +
1693562225.506408-CDS-P-fluviatile_contig13:990839..9912571693562225.506408-CDS-P-fluviatile_contig13:990839..991257Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 990840..991257 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1716.1

>prot_P-fluviatile_contig13.1716.1 ID=prot_P-fluviatile_contig13.1716.1|Name=mRNA_P-fluviatile_contig13.1716.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=161bp
MSQHYHATIYDQAVDQNARFCWANKQKSQVAYHLQHNGLPLPNFYGGGMG
YGFGMNCGGMVYGGANCCNMAPVAAVGQFCPPVLATVAIVGDPVKPDVWT
EHCDEASGNKYYHNPAKGKATWDKPEDFDKNKGEGKPKPPDKPKEKKKTK
YGSTRSCTWI*
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mRNA from alignment at P-fluviatile_contig13:988385..993272+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1716.1 ID=mRNA_P-fluviatile_contig13.1716.1|Name=mRNA_P-fluviatile_contig13.1716.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4888bp|location=Sequence derived from alignment at P-fluviatile_contig13:988385..993272+ (Porterinema fluviatile SAG_2381)
ACGTGGAGATTCATTGTTTGGACCACGAAACGCGACGGTTCGGGGTATTC
GGACCTCGATTGCCCCGTTTTCACGGTCAACCCATCCGAAGCACTGTTGC
CTCTTGTACGAATGGATGGACGGTGGGTTGCTGGAAAAATGGCGTTCGGC
CCACACTGTGACGTCGGGTCAAGTTCGGTCGGCAGATGGGGCGACTTCGA
GTTCAAAGGGTTCATCGCCTCTCTACCGGTGTTGATTGAAAACACGAACC
AAATTTTTAAAGTCACCAGAAAAACAAATCAACCAATATGCGTGCCCGTG
GGGGGATGTTTTGCCACATTCGAAGTTTTAACAAATTCTTGTTTAAGTTC
ACCTCCATCGAGGTTTAGCCCGCACGACATTTTCCATGGCGGGAGCGGGC
CCTGCTCTAAATCGCGAATGAATACCAGAAATCGATAGCGCCACCACCCT
CGTGTTTGGAGTGCCCCAACCATGCTTTGGCGGTATAAAAAGAACGCTTC
CTTTCGTCGAAGGCGAAGAACCCCCCCAACGTTGGGGACATACATTGAAA
ACACAGTTAGTTTAGATATCCAACATTGTGACGTTCCTCGGCAGATTATT
CCGAATAAAGGCGGCACCGGTACCAGGAACGCACGAACACACAACACCCC
TGCAGACCGTCGCACGTGCTGCTCATTCCCGACATCCCTCATTGCCTCAC
TCCGCCTTCTCCCTCCTTTTCCGAGCACCTCTGCCCTGCAGCGGCCGCTT
GTCCTTCGGCGGCCTTCCCTCGAGGCCCTGCTCCAAGCCTGACCAAAGAC
AGAAGCGCAACATCCTGGGCTCTCGCCAAACACGAGAGCACAGCACCTTC
CTTGGAGGTTGAGGGCACATCATCAAGTCAGACGAGCGCAAGGTGCACGA
CGAACTGAAATCCAGAGAGAGGGTGAGGAAAGAGGCCGCCACGGTTGCAT
GGCCGGCAGAGAGATTCGTGCGCCCCTTTGCGTTATTTTTAATCGCGCTA
AGATTTATTTTTTCCGCGAATTATGATGGCCCATGTATGTACAACTGCGG
GTGGCCGCGTTGAAGTTTCTTCAACCCTGCTGCGTGCGTAAAAGAGGATA
TCCTCCAATCGGCAAGCAGATGCTGCGAGGACTCAGATAAATATCAATCG
TGTCAAGACACACGGGCTTTTGCCATGCAGCTCGCTTCTCGGCCCTGCGA
GTGTTTCAAACGGAATCGTCAGACCTCCTTTGTTTCCGAGTCGTGTCGTT
TGAAAATTCCAAGTGTGCCCTGTCTACCGGAAGCAAACATGATTGAGATG
CTGGTCTCGAGCAGAAAAAATGGTGGATGCTTGTAAGCACAGAACATTGC
ACCCTTCCTTTGCGTGTTCACTTGATGTCTGTTGACGAAAGACTCGCATC
TCCGACGCACATGCTCGGCGTGATAGACTTTCGATGGGACCTCGCAATCA
GTAAAGCACATGGGGCGGTGCGTTCGCCGTGCGTGCGTGTCATTCGGTGC
TTTTTAAAAGCACGCGTGACAATAGACGCTGCGAAGCGGTCTTTGGGGTC
CCACGTGAATGTCTATCACAAGCACCACGAACAGCAAGGCTTTCAGGGCG
TTGTCGGATCCACGAATCGAACACACTAGATGCCCGAGCGTGCTGGTTGG
ACATGAGCACCTCTTGCTCCCTTCACATCGACGAGACAACACGACCTCGC
TCCCTTCGAAATGCTTCCGTCGCGGCTGCCCAAACAGTCTTTTCAGGTCC
TGATCAAGCCCGCGGAGACACTATGAGTCAACACTACCACGCCACCATCT
ACGACCAAGCGGTCGACCAGAATGCCCGTTTCTGCTGGTGAGAGTGCACG
CCTCCCTCCTCTCCTTCCTTCGCCGCCCCTTCCCTTCACCATGCGTGACG
CCCTGATGTCTTCCCGGTTTTGATATGCGCGCCGGCGGAATGATGACTGA
TCGCTGGGCACGCAAAAGCAAGTTGGCAACCTTTAGTTAATTGTCGGGCT
TTCGGGCTGCCAGTCTTTTCAGGGAGCTGGCTGGTTGAAGGTGCCCCCCC
GTTGGATGAAAATTCCAAATTATTCCCACTGCAAGCATCGAGCCTATTTC
AAATGTCTCACGTTTGGCGTGTGCATTACATCCTTTTGGAGGTTTGAAGA
ACGCCCGACCGAACATTTATTTCACAGGCGTCAAAACAAGGCCGAAATGC
TCTACGTAAACAATTCTCGTATTCATCTTCTGCCAAGAGTACCCCAGTAC
ACGTTGCGGAATGCTGCCGGTGTGCTTTGAAGCGCTCTCGGGAAGAGTCT
AGCTGGATGAAAGAGCGGCACCCGTCTCCGATGCACTCAGGCATATGCGG
TTAGGCGCACCAGCACGAGAATGCGCAAAAGCGATGGCTCTACTGTTGCG
ACCGTGTCCCTTAACAAGCACCCCACCCCACTCTCTCCTCTACTCGGCTG
CACAGGGCGAACAAGCAGAAGAGTCAGGTTGCCTACCACCTTCAACACAA
TGGCCTCCCCTTACCCAACTTCTACGGCGGCGGGATGGGCTACGGGTTCG
GGATGAACTGCGGCGGGATGGTCTACGGCGGTGCCAACTGCTGCAACATG
GCCCCGGTGGCCGCTGTGGGGCAATTTTGCCCGCCAGTCCTGGCGACAGT
CGCGATCGTCGGCGACCCGGTCAAGCCGGACGTGTGGACGGAGCACTGCG
ACGAGGCCAGCGGCAACAAGTACTACCACAACCCGGCCAAGGGCAAGGCC
ACCTGGGACAAGCCCGAAGACTTCGACAAGAACAAGGGCGAGGGCAAGCC
GAAGCCGCCCGACAAGCCGAAGGAGAAGAAGAAGACCAAGTACGGTTCCA
CGAGGTCGTGCACCTGGATCTGAATTGAGTGGTGAGGAGGAGGAGTCGCG
TGCGGACAATGCGGCACGATGCAACCCGTCGGGTTGTCCTTTGGAGTCGA
GTCGTATGTCCGTACGACACCTCGCAATCATTCAAATCACTGACGGGCTT
TCAAGCTGGGGATCCGAGGGGAGTCGTGAGTGATTGCGTGAGAGAGGGTC
GACGGGCTCAGACGTTTTTGTGCTGAGCCTCTTGGGGGATGAATTCGATC
GGGTAAGGCGGGCATTGTGTTGATGTGTATGTGGAGGGTGTTTTTGTCAC
TTGCTTCACGTCTTCTGTCTGCTATCGTCGACAGCGTATGCAAAGCGGCC
CTGAAGTTCGACTCGAATATTTGTGCCAAGAATTTTTTTCTTGCGGGGCA
GGTTGAAAGTTGACCGTGTTTTTCAGTAAAAGTCACACTTTGGTGAACGA
CCCTGGATTGATCGGTCCATCCGCCAACGCACATATTTTTTTGTTTTCGT
AGATGCGGCGGCACACAGTCACATAATATCTCTCTGTTTTTGAGCTTCAT
CCACCACACACATTTTTTTGCCATTACACTGCCGTTGTATGAGAGGGATT
TCGTACTCACACCATTTGCAAGTTTCAAAAGTTCTCACACCATTTATTTG
CGAGTTCCAATGCTCTCACACCATTCGCAAAATTCAATTTTCTTCGAGGG
TTGTGAAGAAGTTTTGCTGTTCTTGGTGTAAACACACCTCTTAAGCACGT
GTTTCGATTTGAGGGCTTGAGTCTTGGTGCCCGACTTCTCCTGAATGAAA
GCGCGAAAGGCGTGGTCTCGACTTGTGTGTCATGTTCACTTTATCAACGT
ATATCCGTGCTTTCAGCAAGCACTCGGTGCCTTGATGAGGCCGCATTTCT
CACCGAGTTTGTTGAGATATTGGTTTGATTTGAGCGCCGATAATGATAAG
GTCATCTTACCGTGTTCTTGAGCTTGGTCGTCGATGTATGTATATGTAAA
AATTGAGCGTTCTGAAGTTAGATCGGGGCACCGCGCACACGCACACAGTA
AGCTTGATGCGGCTTGGTTACAAGTTGAAGTTTTATTGCACATGGTGAAC
AGTGCGTGTGTGCTCTTGGTTATGGTTTGTGTTGGAATCATGTGGTAGTT
ATCATTTGACTGTTTGAGTTTTGGCCATTATTTGTGCGCACTCACTCACA
TCTGTTTTAAGACGTCACCACATTTGACGCGCAGCTGAAGACGCCTTCTG
CCAAGGCGTGTTGATTTTTCGTGACAAGCGTGGTGCTGTGGCGATCCCGA
CATCTCGGCGTGTTCACTACCGGGGTGTCCGAATATTGTGACAGTGATGG
GAACACCTTGTAGATAATGGGAGGATTGGATTTTCATCTCATGCGTGTTT
CAGAATTTGAATATCGGAGCGAGACTATTATTTGGTACTCTTTCGAAGAT
AGTGCGACGTATGTTGTATCCTGGGTGCCGTTTCAAATTAAAGTCGTGCA
GCCGCCATTTGACAGGTCGACTTTTTGGCAATAATTTCGGTGCAATCAGT
CCCATGTGTTGTAGGACGCCGGCTCCTTTCGGCACAAGCTGAAGAATCCT
TCTCCAACGGTGAATGTTTATTTTTCGTGACAAGCGTAGTGCTGTGATGA
TAATGACATCTTGGCGTTGTCAAAGCCGGGGGGCTGCACATATTTTGATG
ATGGTGGCAAAATACCGTAGAAAAAGGGGCACTCTTAATATATTTTCATC
GTACGCGTGTCGACATTCGAATGGACAAGAGTTCTTCCTTCGGACTCGTG
TGAAAAGGCGCTGCAGATTAGCAAATGATTCCGCGCGGAATAAGGGTAGG
GTGTGTTATCGTGCCATCTTGGATGTCGGAAATGACTGGGCAAGAGTTAG
CTTACCATGCCACAAAAATATTCGTCTGAAGTGGCGCGTGAAGACAAGGA
CTTTTCCCGTAATGATTTCATGGGAGTGACGAAGGGCTTCAAGTTTTTCT
GATTTGGAGACGGCGGGGTGTAGGCAAATCGACGGCAT
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:988385..993272+

>mRNA_P-fluviatile_contig13.1716.1 ID=mRNA_P-fluviatile_contig13.1716.1|Name=mRNA_P-fluviatile_contig13.1716.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=966bp|location=Sequence derived from alignment at P-fluviatile_contig13:988385..993272+ (Porterinema fluviatile SAG_2381)
ATGAGTCAACACTACCACGCCACCATCTACGACCAAGCGGTCGACCAGAA
TGCCCGTTTCTGCTGATGAGTCAACACTACCACGCCACCATCTACGACCA
AGCGGTCGACCAGAATGCCCGTTTCTGCTGGGCGAACAAGCAGAAGAGTC
AGGTTGCCTACCACCTTCAACACAATGGCCTCCCCTTACCCAACTTCTAC
GGCGGCGGGATGGGCTACGGGTTCGGGATGAACTGCGGCGGGATGGTCTA
CGGCGGTGCCAACTGCTGCAACATGGCCCCGGTGGCCGCTGTGGGGCAAT
TTTGCCCGCCAGTCCTGGCGACAGTCGCGATCGTCGGCGACCCGGTCAAG
CCGGACGTGTGGACGGAGCACTGCGACGAGGCCAGCGGCAACAAGTACTA
CCACAACCCGGCCAAGGGCAAGGCCACCTGGGACAAGCCCGAAGACTTCG
ACAAGAACAAGGGCGAGGGCAAGCCGAAGCCGCCCGACAAGCCGAAGGAG
AAGAAGAAGACCAAGTACGGTTCCACGAGGTCGTGCACCTGGATCTGAGG
CGAACAAGCAGAAGAGTCAGGTTGCCTACCACCTTCAACACAATGGCCTC
CCCTTACCCAACTTCTACGGCGGCGGGATGGGCTACGGGTTCGGGATGAA
CTGCGGCGGGATGGTCTACGGCGGTGCCAACTGCTGCAACATGGCCCCGG
TGGCCGCTGTGGGGCAATTTTGCCCGCCAGTCCTGGCGACAGTCGCGATC
GTCGGCGACCCGGTCAAGCCGGACGTGTGGACGGAGCACTGCGACGAGGC
CAGCGGCAACAAGTACTACCACAACCCGGCCAAGGGCAAGGCCACCTGGG
ACAAGCCCGAAGACTTCGACAAGAACAAGGGCGAGGGCAAGCCGAAGCCG
CCCGACAAGCCGAAGGAGAAGAAGAAGACCAAGTACGGTTCCACGAGGTC
GTGCACCTGGATCTGA
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