mRNA_P-fluviatile_contig13.1710.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1710.1
Unique NamemRNA_P-fluviatile_contig13.1710.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig13.1710.1 vs. uniprot
Match: D7FKK2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKK2_ECTSI)

HSP 1 Score: 375 bits (962), Expect = 4.140e-126
Identity = 196/265 (73.96%), Postives = 225/265 (84.91%), Query Frame = 2
Query:  296 VPPAVRSRKRARQIVTTFHKLTKEAEEVASSQAADKEAKLKGLERELEQMGGRQAYQSASLLSVSFHNTSKWVTQQLVGNLSLRPRPGERPLRVLEVGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSLKPAGEYDVVASSMVINCVSTARGRYEMLQGYRNHLRDGGHLFLMLPLLCLTKSTRTTRESFMETLAHIGFKLVAGKESPKVAFFCLTTAPPK---VSEPGRQLETSRPASKHAGRAVVSGKPRRNRGGNNFAV 1081
            VPPA+RSRK+ARQIVTTFHKL KEA+EV+SS A DK+A+L+ LEREL++MGGRQAYQSASLLSVSFHNTSKWVT+QL G + LRP  GE PLRVLEVGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSL+PAGEYDVV+SSMVINCV TA+GR+EML GYR+HLR+GGHLFL+LPLLCLTKSTRTTRESF+ETL+ IGF +VA KE+PKVAFFCL     +   V   G  L T    ++ AG A  + + +RNRG N+FAV
Sbjct:   14 VPPAIRSRKKARQIVTTFHKLEKEADEVSSSTAPDKQARLERLERELDEMGGRQAYQSASLLSVSFHNTSKWVTKQLAGKMGLRPANGEPPLRVLEVGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSLEPAGEYDVVSSSMVINCVPTAKGRHEMLVGYRSHLRNGGHLFLVLPLLCLTKSTRTTRESFLETLSRIGFMVVAKKETPKVAFFCLRNTRLEARDVQVGGSSLATKEGGTRGAGAAKGTSR-KRNRGANDFAV 277          
BLAST of mRNA_P-fluviatile_contig13.1710.1 vs. uniprot
Match: A0A2P4Y049_9STRA (Uncharacterized protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y049_9STRA)

HSP 1 Score: 245 bits (626), Expect = 1.900e-75
Identity = 137/269 (50.93%), Postives = 178/269 (66.17%), Query Frame = 2
Query:  299 PPAVRSRKRARQIVTTFHKLTKEAEEVASSQAADKEAKLKGLER------ELEQMGGRQAYQSASLLSVSFHNTSKWVTQQLVGNLSLRPRPGERPLRVLEVGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSLKPAGEYDVVASSMVINCVSTARGRYEMLQGYRNHLRDGGHLFLMLPLLCLTKSTRTTRESFMETLAHIGFKLVAGKESPKVAFFCLTTAPPKVSEPGRQLETSRPASKHAGRAVVSGKPRRNRGGNNFAVCL 1087
            PP ++SR++ARQ+ T FH+LT E + +   + AD +A+ +  ER      +LE++GGRQAYQ AS+LS SFH TSKWV Q L+    LRP+  + PLRVLEVGAINT+LL  PWLDVRAIDL S+H RIE+RDFFSLKP GE+ V+ SSMV+NCV  A  R EML+ YR HL++GG LFLMLPLLCL  S   T   F + L  +GF++   K+SPKVAFFCL            ++ET    +    + +VSG  R     N+F+V +
Sbjct:   24 PPRMKSRRKARQVTTNFHRLTHELDRLKQQKPADAQAQAQRNERMAQVNKQLEELGGRQAYQDASILSTSFHRTSKWVFQ-LLTRFELRPKAKQPPLRVLEVGAINTQLLSCPWLDVRAIDLNSRHERIEQRDFFSLKPTGEFQVLVSSMVLNCVPGADKRGEMLKLYREHLKEGGLLFLMLPLLCLRHSQFMTYARFTKILEAVGFRVRETKDSPKVAFFCL-----------ERIETVNETASFPHKLMVSGDKR-----NDFSVVI 275          
BLAST of mRNA_P-fluviatile_contig13.1710.1 vs. uniprot
Match: W2PYR3_PHYPN (Probable methyltransferase BMT2 homolog n=14 Tax=Phytophthora TaxID=4783 RepID=W2PYR3_PHYPN)

HSP 1 Score: 243 bits (620), Expect = 1.880e-74
Identity = 135/265 (50.94%), Postives = 176/265 (66.42%), Query Frame = 2
Query:  299 PPAVRSRKRARQIVTTFHKLTKEAEEVASSQAADKEAK--LKGLERELEQMGGRQAYQSASLLSVSFHNTSKWVTQQLVGNLSLRPRPGERPLRVLEVGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSLKPAGEYDVVASSMVINCVSTARGRYEMLQGYRNHLRDGGHLFLMLPLLCLTKSTRTTRESFMETLAHIGFKLVAGKESPKVAFFCLTTAPPKVSEPGRQLETSRPASKHAGRAVVSGKPRRNRGGNNFAVCL 1087
            PP ++SR++ARQ+ T FH+LT E + +   ++ D+  K  +  + R+LE++GGRQAYQ AS+LS SFH TSKWV Q L+    LRP+  + PLRVLEVGAINT+LL  PWLDVRAIDL S+H RIE+RDFFSLKP GE+ VV SSMV+NCV  A  R EML+ YR HL++GG LFLMLPLLCL  S   T   F + L  +GF++   K+SPKVAF CL            ++ET    +    + +VSG  R     N+F+V +
Sbjct:   35 PPRMKSRRKARQVTTNFHRLTHELDRLKQHKSLDESQKQRIAEINRQLEELGGRQAYQDASILSTSFHRTSKWVFQ-LLTRFELRPKAKQPPLRVLEVGAINTQLLSCPWLDVRAIDLNSRHERIEQRDFFSLKPEGEFQVVVSSMVLNCVPGADKRGEMLRLYREHLKEGGLLFLMLPLLCLRHSQFMTYARFAKILEAVGFRVRETKDSPKVAFLCL-----------ERIETVNENASFPHKLLVSGDKR-----NDFSVVI 282          
BLAST of mRNA_P-fluviatile_contig13.1710.1 vs. uniprot
Match: A0A6A3HQH5_9STRA (Probable methyltransferase BMT2 homolog n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3HQH5_9STRA)

HSP 1 Score: 242 bits (617), Expect = 6.400e-74
Identity = 134/266 (50.38%), Postives = 177/266 (66.54%), Query Frame = 2
Query:  299 PPAVRSRKRARQIVTTFHKLTKEAEEVA---SSQAADKEAKLKGLERELEQMGGRQAYQSASLLSVSFHNTSKWVTQQLVGNLSLRPRPGERPLRVLEVGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSLKPAGEYDVVASSMVINCVSTARGRYEMLQGYRNHLRDGGHLFLMLPLLCLTKSTRTTRESFMETLAHIGFKLVAGKESPKVAFFCLTTAPPKVSEPGRQLETSRPASKHAGRAVVSGKPRRNRGGNNFAVCL 1087
            PP ++SR++ARQ+ TTFH+LT E + +    S QA  ++ ++  + ++L+ +GGRQAYQ AS+LS SFH TSKWV Q L+    LRP+  + PLRVLEVGAINT+LL  PWLDVRAIDL S+H RIE+RDFFSL+P GE+ V+ SSMV+NCV  A  R EML+ YR HL++GG LFLMLPLLCL  S   T   F + L  +GF++   K+SPKVAFFCL            + ET   A+    + +V G  R     N+F+V +
Sbjct:   40 PPRMKSRRKARQVTTTFHRLTHELDRLKQKPSGQAQQQQERVAEINKQLDALGGRQAYQDASILSTSFHRTSKWVFQ-LLTRFELRPKAKQPPLRVLEVGAINTQLLSCPWLDVRAIDLNSRHERIEQRDFFSLQPVGEFQVLVSSMVLNCVPGADKRGEMLRLYREHLKEGGLLFLMLPLLCLRHSQFMTYARFTKILEAVGFRVRETKDSPKVAFFCL-----------ERTETVNEAASFPQKLLVPGDKR-----NDFSVVI 288          
BLAST of mRNA_P-fluviatile_contig13.1710.1 vs. uniprot
Match: H3GRM7_PHYRM (Probable methyltransferase BMT2 homolog n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRM7_PHYRM)

HSP 1 Score: 238 bits (606), Expect = 3.320e-72
Identity = 132/240 (55.00%), Postives = 166/240 (69.17%), Query Frame = 2
Query:  299 PPAVRSRKRARQIVTTFHKLTKEAEEV------ASSQAADKEAKLKGLERELEQMGGRQAYQSASLLSVSFHNTSKWVTQQLVGNLSLRPRPGERPLRVLEVGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSLKPAGEYDVVASSMVINCVSTARGRYEMLQGYRNHLRDGGHLFLMLPLLCLTKSTRTTRESFMETLAHIGFKLVAGKESPKVAFFCL--TTAPP-KVSEPGRQL 991
            PP ++SR++ARQ+ T FH+LT E + +      A  Q   +  +L  + ++LEQ+GGRQAYQ AS+L+ SFH TSKWV Q L+     RP+  + PLRVLEVGAINT+LL  PWLDVRAIDL S+H RIE+RDFFSLKP GE+ V+ SSMV+NCV  A  R EML+ YR HL++GG LFLMLPLLCL  S   T   F + L  +GF++   K+SPKVAFFCL  T AP  K S P + L
Sbjct:   42 PPRMKSRRKARQVTTNFHRLTHELDRLKQQKPAAPEQQQQQNERLSEINKQLEQLGGRQAYQDASILNTSFHRTSKWVFQ-LLTRFERRPKAKQPPLRVLEVGAINTQLLSCPWLDVRAIDLNSRHERIEQRDFFSLKPTGEFHVLVSSMVLNCVPGADKRGEMLRLYREHLKEGGLLFLMLPLLCLRHSQFMTYARFTKILEAVGFRVRETKDSPKVAFFCLERTEAPDDKASFPHKLL 280          
BLAST of mRNA_P-fluviatile_contig13.1710.1 vs. uniprot
Match: A0A225VUQ8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VUQ8_9STRA)

HSP 1 Score: 236 bits (602), Expect = 8.000e-72
Identity = 130/264 (49.24%), Postives = 173/264 (65.53%), Query Frame = 2
Query:  299 PPAVRSRKRARQIVTTFHKLTKEAEEVASSQAAD-KEAKLKGLERELEQMGGRQAYQSASLLSVSFHNTSKWVTQQLVGNLSLRPRPGERPLRVLEVGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSLKPAGEYDVVASSMVINCVSTARGRYEMLQGYRNHLRDGGHLFLMLPLLCLTKSTRTTRESFMETLAHIGFKLVAGKESPKVAFFCLTTAPPKVSEPGRQLETSRPASKHAGRAVVSGKPRRNRGGNNFAVCL 1087
            PP ++SR++ARQ+ T FH+LT E + +   +  + +  ++  + + LE +GGRQAYQ AS+LS SFH TSKWV Q L+     RPR  + PLRVLEVGAINT+LL  PWLDVRAIDL S+H RIE+RDFF+L+P GE+ V+ SSMV+NCV  A  R EML+ YR HLR+GG LFLMLPLLCL  S   T   F + +  +GF++   K+SPKVAFFCL            ++ET    +    + +VSG  R     N+F+V +
Sbjct:   31 PPRMKSRRKARQVTTNFHRLTHELDRLKQQKPTEQRNERITEINKRLEALGGRQAYQDASILSTSFHRTSKWVFQ-LLTRFERRPRAKQPPLRVLEVGAINTQLLSCPWLDVRAIDLNSRHERIEQRDFFTLQPTGEFQVLVSSMVLNCVPGADKRGEMLKLYRQHLREGGLLFLMLPLLCLRHSQFMTYARFTKIVEAVGFRVRETKDSPKVAFFCL-----------ERIETLNEMASFPHKLLVSGDKR-----NDFSVVI 277          
BLAST of mRNA_P-fluviatile_contig13.1710.1 vs. uniprot
Match: A0A662XLB4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLB4_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.130e-71
Identity = 129/224 (57.59%), Postives = 160/224 (71.43%), Query Frame = 2
Query:  299 PPAVRSRKRARQIVTTFHKLTKEAEEVA---SSQAAD----KEAKLKGLERELEQMGGRQAYQSASLLSVSFHNTSKWVTQQLVGNLSLRPRPGERPLRVLEVGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSLKPAGEYDVVASSMVINCVSTARGRYEMLQGYRNHLRDGGHLFLMLPLLCLTKSTRTTRESFMETLAHIGFKLVAGKESPKVAFFCL 949
            PP ++SR++ARQ+ T FH+LT E + +    +S AAD    +  K+  L   L+ +GGRQAYQ AS+LS SFH TSKWV Q L+    LRP+  + PLRVLEVGAINT+LL  PWLDVRAIDL S+H RIE+RDFFSLKP+GE+ V+ SSMV+NCV  A  R EML+ YR HLR+GG LFLMLPLLCL  S   T   F + L  +GF++   K+SPKVAFFCL
Sbjct:   47 PPRMKSRRKARQVTTEFHRLTHELDRLKQQKASTAADAPQQRTEKITELNARLDALGGRQAYQDASILSTSFHKTSKWVFQ-LLTRFELRPKAKQPPLRVLEVGAINTQLLTCPWLDVRAIDLNSRHERIEQRDFFSLKPSGEFQVLVSSMVLNCVPGAAQRGEMLRLYRAHLREGGLLFLMLPLLCLRHSQFMTYLRFTQILEAVGFRVREAKDSPKVAFFCL 269          
BLAST of mRNA_P-fluviatile_contig13.1710.1 vs. uniprot
Match: A0A835YKU5_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKU5_9STRA)

HSP 1 Score: 234 bits (596), Expect = 4.200e-71
Identity = 129/235 (54.89%), Postives = 157/235 (66.81%), Query Frame = 2
Query:  296 VPPAVRSRKRARQIVTTFHKLTKEAEEVASSQAA---DKEAKLKGLERELEQMGGRQAYQSASLLSVSFHNTSKWVTQQLVGNLSLRPRPGERPLRVLEVGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSLKPAGEYDVVASSMVINCVSTARGRYEMLQGYRNHLRDGGHLFLMLPLLCLTKSTRTTRESFMETLAHIGFKLVAGKESPKVAFFCLTTA--PPKVSEPGR 985
            +PP ++SRKRARQI T FHKLTK+  +V S       +K+ +L  L+REL+ +GGR+AYQSASLLSV +HNTSKWVTQQL  ++ +RP  G  PL +LEVGAIN RLL VPWL VRAIDL++ HPR+E  DFF L P G +D  A +MV+NCV     R  ML   R HLR GG L L LPLLCLT S   +   F   LAH GF +VA + SP+VAF+ L  A  PP    P R
Sbjct:   11 LPPPLKSRKRARQITTAFHKLTKQQAQVKSDDGLSEREKQQRLTQLQRELDGIGGREAYQSASLLSVQYHNTSKWVTQQLE-HMGMRPAKGAPPLNLLEVGAINDRLLSVPWLRVRAIDLRAAHPRVERADFFDLAPRGAFDAAALAMVLNCVPEPARRGAMLARLRRHLRPGGALLLALPLLCLTNSRCMSAPRFAAILAHAGFDVVAERRSPRVAFYVLRAAREPPPDGAPPR 244          
BLAST of mRNA_P-fluviatile_contig13.1710.1 vs. uniprot
Match: K3X5P0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5P0_GLOUD)

HSP 1 Score: 231 bits (588), Expect = 1.740e-69
Identity = 129/265 (48.68%), Postives = 170/265 (64.15%), Query Frame = 2
Query:  302 PAVRSRKRARQIVTTFHKLTKEAEEVASSQA---ADKEAKLKGLERELEQMGGRQAYQSASLLSVSFHNTSKWVTQQLVGNLSLRPRPGERPLRVLEVGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSLKPAGEYDVVASSMVINCVSTARGRYEMLQGYRNHLRDGGHLFLMLPLLCLTKSTRTTRESFMETLAHIGFKLVAGKESPKVAFFCLTTAPPKVSEPGRQLETSRPASKHAGRAVVSGKPRRNRGGNNFAVCL 1087
            P ++SR++ARQ+ T FH+LT E +++   +A   A+K+ KL  L  +++ +GGR AYQ AS+LS SFH TSKWV Q L+    LRP+  E PLRVLEVGAINT+LL  PWL+VRAIDL S+H RIE+RDFF LK  GE+ V+ SSMV+NCV  A  R +ML+ Y  HL+  GHLFLM+PLLCL  S   T   F+E L  +GF +   K+SPKV+FFCL   P  +      L  +    +   + +V G  R     N F+V L
Sbjct:   39 PKMKSRRKARQVTTDFHRLTHEVDKIKKDKALSGAEKQTKLAELNAQIDAIGGRTAYQDASILSTSFHKTSKWVFQ-LLTKFGLRPKSKEPPLRVLEVGAINTQLLTCPWLNVRAIDLNSRHERIEQRDFFDLKAEGEFQVLVSSMVLNCVPDAVSRGKMLKLYYEHLQPSGHLFLMIPLLCLRNSKFMTYARFVEILKAVGFFVKETKDSPKVSFFCLEKKPEAIE--AATLANASTTVRFPHKLLVQGDKR-----NTFSVVL 295          
BLAST of mRNA_P-fluviatile_contig13.1710.1 vs. uniprot
Match: A0A0P1AR11_PLAHL (25S rRNA (Adenine(2142)-N(1))-methyltransferase, Bmt2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AR11_PLAHL)

HSP 1 Score: 229 bits (583), Expect = 6.720e-69
Identity = 121/220 (55.00%), Postives = 157/220 (71.36%), Query Frame = 2
Query:  299 PPAVRSRKRARQIVTTFHKLTKEAEEVASSQAADKEAK---LKGLERELEQMGGRQAYQSASLLSVSFHNTSKWVTQQLVGNLSLRPRPGERPLRVLEVGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSLKPAGEYDVVASSMVINCVSTARGRYEMLQGYRNHLRDGGHLFLMLPLLCLTKSTRTTRESFMETLAHIGFKLVAGKESPKVAFFCL 949
            PP ++SR++AR ++T FH+LT E + +   +  + E +   +  + +EL ++GGRQAYQ AS+LS SFH TSKWV + L+    LRP+  + PL VLEVGAINT+LL  PWL+VRAIDLKS+H RIE+ DFFSLKPAGE+ +V SSMV+NCV  A  R +ML+ YR HL DGG LFLMLPLLCL  S   T   F + L  +GF++   K+SPKVAFFCL
Sbjct:   35 PPRMKSRRKARNVITKFHRLTHELDRLEQQKLDEVETRKLRIAEINQELIELGGRQAYQDASILSTSFHRTSKWVFR-LLTRFELRPKAKQPPLPVLEVGAINTQLLSCPWLNVRAIDLKSRHERIEQCDFFSLKPAGEFQIVVSSMVLNCVPGAVKRGQMLRLYREHLMDGGLLFLMLPLLCLRHSKFMTYSRFTKILEAVGFRVRETKDSPKVAFFCL 253          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKK2_ECTSI4.140e-12673.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2P4Y049_9STRA1.900e-7550.93Uncharacterized protein n=2 Tax=Phytophthora palmi... [more]
W2PYR3_PHYPN1.880e-7450.94Probable methyltransferase BMT2 homolog n=14 Tax=P... [more]
A0A6A3HQH5_9STRA6.400e-7450.38Probable methyltransferase BMT2 homolog n=3 Tax=Ph... [more]
H3GRM7_PHYRM3.320e-7255.00Probable methyltransferase BMT2 homolog n=1 Tax=Ph... [more]
A0A225VUQ8_9STRA8.000e-7249.24Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A662XLB4_9STRA1.130e-7157.59Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A835YKU5_9STRA4.200e-7154.89Putative methyltransferase-domain-containing prote... [more]
K3X5P0_GLOUD1.740e-6948.68Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1AR11_PLAHL6.720e-6955.0025S rRNA (Adenine(2142)-N(1))-methyltransferase, B... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:904175..906083 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score374.8
Seed ortholog evalue3.4e-101
Seed eggNOG ortholog2880.D7FKK2
KEGG koko:K18849
EggNOG free text desc.25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2
EggNOG OGs297K0@1,2REJX@2759
EC2.1.1.286
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Hectar predicted targeting categoryother localisation
Ec32 ortholog description25S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2
Ec32 orthologEc-12_001780.1
Exons3
Model size1281
Cds size807
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1710.1prot_P-fluviatile_contig13.1710.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 904366..905800 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815550.0420334-UTR-P-fluviatile_contig13:904174..9043651622815550.0420334-UTR-P-fluviatile_contig13:904174..904365Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 904175..904365 -
1693562223.3380952-UTR-P-fluviatile_contig13:904174..9043651693562223.3380952-UTR-P-fluviatile_contig13:904174..904365Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 904175..904365 -
1622815550.090726-UTR-P-fluviatile_contig13:905800..9060831622815550.090726-UTR-P-fluviatile_contig13:905800..906083Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 905801..906083 -
1693562223.3721697-UTR-P-fluviatile_contig13:905800..9060831693562223.3721697-UTR-P-fluviatile_contig13:905800..906083Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 905801..906083 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815550.054052-CDS-P-fluviatile_contig13:904365..9047291622815550.054052-CDS-P-fluviatile_contig13:904365..904729Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 904366..904729 -
1693562223.3478515-CDS-P-fluviatile_contig13:904365..9047291693562223.3478515-CDS-P-fluviatile_contig13:904365..904729Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 904366..904729 -
1622815550.0672052-CDS-P-fluviatile_contig13:905058..9052011622815550.0672052-CDS-P-fluviatile_contig13:905058..905201Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 905059..905201 -
1693562223.3555765-CDS-P-fluviatile_contig13:905058..9052011693562223.3555765-CDS-P-fluviatile_contig13:905058..905201Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 905059..905201 -
1622815550.0787146-CDS-P-fluviatile_contig13:905500..9058001622815550.0787146-CDS-P-fluviatile_contig13:905500..905800Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 905501..905800 -
1693562223.363986-CDS-P-fluviatile_contig13:905500..9058001693562223.363986-CDS-P-fluviatile_contig13:905500..905800Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 905501..905800 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1710.1

>prot_P-fluviatile_contig13.1710.1 ID=prot_P-fluviatile_contig13.1710.1|Name=mRNA_P-fluviatile_contig13.1710.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=269bp
MGIQVPPAVRSRKRARQIVTTFHKLTKEAEEVASSQAADKEAKLKGLERE
LEQMGGRQAYQSASLLSVSFHNTSKWVTQQLVGNLSLRPRPGERPLRVLE
VGAINTRLLDVPWLDVRAIDLKSQHPRIEERDFFSLKPAGEYDVVASSMV
INCVSTARGRYEMLQGYRNHLRDGGHLFLMLPLLCLTKSTRTTRESFMET
LAHIGFKLVAGKESPKVAFFCLTTAPPKVSEPGRQLETSRPASKHAGRAV
VSGKPRRNRGGNNFAVCL*
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mRNA from alignment at P-fluviatile_contig13:904175..906083-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1710.1 ID=mRNA_P-fluviatile_contig13.1710.1|Name=mRNA_P-fluviatile_contig13.1710.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1909bp|location=Sequence derived from alignment at P-fluviatile_contig13:904175..906083- (Porterinema fluviatile SAG_2381)
AGAGAAGGCCGATATTACCATGGCGAAGCGACGAAAACCTATCCCACTGG TGAGCGGCTGCAATGATTCAATCGATTTCTGTAGCCATACGCATCGCCGA TGTGTACACTGCTGTATGTGATGTAAGTTGACCCACCGCAAGCGCCGCCC GTACACCTGAGAGCTTGATGATCGTGCAAGCGGATCAACCTGCGGGAGCT GTTGCGTATCGCAGCTTGTGCTCGCCGCCATTTGCCCCTTTAACGTGGTG TCGAGCGAGCGATCTGTCAAAATCTTGTCACATATGGGGATACAGGTGCC GCCGGCGGTGCGGTCGAGAAAAAGGGCAAGGCAAATCGTCACCACTTTCC ACAAGCTCACCAAAGAGGCGGAAGAGGTGGCCTCCAGCCAAGCCGCTGAC AAGGAGGCCAAGCTGAAGGGGCTTGAGCGTGAGCTGGAGCAAATGGGAGG GAGGCAGGCTTATCAGAGCGCGAGCTTGTTGAGTGTCAGCTTTCACAACA CCTCAAAGTGGGTGACTCAACAGTTGGTCGGAAACTTGAGCTTACGGCCA CGACCTGGTGAACGACCACTGCGCGTGCTCGAGGTGGGTGATGCCAGGCA GGAGGCGGCTACTGCTGCTGCTGTTGACTGTCGTACAATGCGCGAGTGCG AGCTGCCTTGATGTTGGCCAACGCACCGCGTGTCGCACCTGCCTCAAGCC TTGAGTATACCTCAGGGATGCAAAAATGCGCCGGAGATCGAAGTTCATGT GTGGAGAGACTGCAGGAAAATGGGCATCTCCGTTTCTTCTGCTCAAAAAT TTTCAAGCGCCGCCTTGCTTTTTGAACTACACGGGGGCTGTATCGTATTG ATGCTACCGCATTGTCTTGCCTGTTCGCCTAGGTGGGCGCTATCAACACT CGACTTCTGGACGTGCCATGGCTCGACGTCCGTGCAATCGATCTCAAGTC GCAGCATCCACGGATCGAGGAGCGCGATTTCTTCTCTTTGAAGCCTGCCG GAGAATACGACGTGGTTGCATCCAGGTGAGCCGGGTGGTGCGGAACGGAT GGGTCATCCCCGGAAACAGGTGGATCGCTCGTGGCCTGGGATTTGATCGT GAGGAGAATGCAAAACATTGGATCGATGATTAACTCGCATGTGCCAGACT TTTGTCTTCAAGAATTGGTAGATCTCCTGTACTTTGCAGTGGCAACACCC GCTCTGTAAACCATTCTTGCCAGTAATTTACCGCTAGTCATGTGCAGTGG ATGGACGCAAGCGACCATCCCACGCTTACGCGACCATCGCCCATCTGACG TGCGGGTGCCTTCCTCCCCGTGCTTGTTGGCGGTGTCCCATGATGTATCA CCAGCATGGTGATCAACTGCGTTTCGACGGCCAGAGGCAGGTACGAGATG CTCCAGGGCTACCGCAACCACCTTCGTGACGGCGGGCACCTCTTCCTCAT GCTTCCTCTGCTTTGCCTCACGAAAAGCACGCGGACGACCAGGGAATCCT TCATGGAAACTTTAGCACATATTGGATTTAAGCTTGTGGCGGGAAAAGAG TCGCCGAAAGTAGCGTTTTTTTGCTTGACGACCGCACCGCCGAAGGTCTC GGAACCCGGGCGGCAATTGGAAACGTCTCGGCCGGCCAGCAAGCATGCTG GTAGAGCGGTCGTTTCGGGAAAGCCGAGAAGAAATCGTGGGGGAAACAAC TTTGCCGTTTGTCTTTGATTGTGATTCGTCGTGGACCGCAGACCTCTTCT GCGCGGTAAATCTCGTCATCAATCCACAATCCCGCCACGTTCTTGACATC CATACGCGCGGTATTTTCCTCACAGCACCATGGGCCGACAGGCGCCATGG CGATGTGCAGATCGCGAATGTATCCGCGTGGCGTGGGGCAACTTACATGG TTGCAAACG
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:904175..906083-

>mRNA_P-fluviatile_contig13.1710.1 ID=mRNA_P-fluviatile_contig13.1710.1|Name=mRNA_P-fluviatile_contig13.1710.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1614bp|location=Sequence derived from alignment at P-fluviatile_contig13:904175..906083- (Porterinema fluviatile SAG_2381)
ATGGGGATACAGGTGCCGCCGGCGGTGCGGTCGAGAAAAAGGGCAAGGCA
AATCGTCACCACTTTCCACAAGCTCACCAAAGAGGCGGAAGAGGTGGCCT
CCAGCCAAGCCGCTGACAAGGAGGCCAAGCTGAAGGGGCTTGAGCGTGAG
CTGGAGCAAATGGGAGGGAGGCAGGCTTATCAGAGCGCGAGCTTGTTGAG
TGTCAGCTTTCACAACACCTCAAAGTGGGTGACTCAACAGTTGGTCGGAA
ACTTGAGCTTACGGCCACGACCTGGTGAACGACCACTGCGCGTGCTCGAG
ATGGGGATACAGGTGCCGCCGGCGGTGCGGTCGAGAAAAAGGGCAAGGCA
AATCGTCACCACTTTCCACAAGCTCACCAAAGAGGCGGAAGAGGTGGCCT
CCAGCCAAGCCGCTGACAAGGAGGCCAAGCTGAAGGGGCTTGAGCGTGAG
CTGGAGCAAATGGGAGGGAGGCAGGCTTATCAGAGCGCGAGCTTGTTGAG
TGTCAGCTTTCACAACACCTCAAAGTGGGTGACTCAACAGTTGGTCGGAA
ACTTGAGCTTACGGCCACGACCTGGTGAACGACCACTGCGCGTGCTCGAG
GTGGGCGCTATCAACACTCGACTTCTGGACGTGCCATGGCTCGACGTCCG
TGCAATCGATCTCAAGTCGCAGCATCCACGGATCGAGGAGCGCGATTTCT
TCTCTTTGAAGCCTGCCGGAGAATACGACGTGGTTGCATCCAGGTGGGCG
CTATCAACACTCGACTTCTGGACGTGCCATGGCTCGACGTCCGTGCAATC
GATCTCAAGTCGCAGCATCCACGGATCGAGGAGCGCGATTTCTTCTCTTT
GAAGCCTGCCGGAGAATACGACGTGGTTGCATCCAGCATGGTGATCAACT
GCGTTTCGACGGCCAGAGGCAGGTACGAGATGCTCCAGGGCTACCGCAAC
CACCTTCGTGACGGCGGGCACCTCTTCCTCATGCTTCCTCTGCTTTGCCT
CACGAAAAGCACGCGGACGACCAGGGAATCCTTCATGGAAACTTTAGCAC
ATATTGGATTTAAGCTTGTGGCGGGAAAAGAGTCGCCGAAAGTAGCGTTT
TTTTGCTTGACGACCGCACCGCCGAAGGTCTCGGAACCCGGGCGGCAATT
GGAAACGTCTCGGCCGGCCAGCAAGCATGCTGGTAGAGCGGTCGTTTCGG
GAAAGCCGAGAAGAAATCGTGGGGGAAACAACTTTGCCGTTTGTCTTTGA
CATGGTGATCAACTGCGTTTCGACGGCCAGAGGCAGGTACGAGATGCTCC
AGGGCTACCGCAACCACCTTCGTGACGGCGGGCACCTCTTCCTCATGCTT
CCTCTGCTTTGCCTCACGAAAAGCACGCGGACGACCAGGGAATCCTTCAT
GGAAACTTTAGCACATATTGGATTTAAGCTTGTGGCGGGAAAAGAGTCGC
CGAAAGTAGCGTTTTTTTGCTTGACGACCGCACCGCCGAAGGTCTCGGAA
CCCGGGCGGCAATTGGAAACGTCTCGGCCGGCCAGCAAGCATGCTGGTAG
AGCGGTCGTTTCGGGAAAGCCGAGAAGAAATCGTGGGGGAAACAACTTTG
CCGTTTGTCTTTGA
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