|
|
Homology
BLAST of mRNA_P-fluviatile_contig13.1702.1 vs. uniprot
Match: D7FKJ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKJ6_ECTSI) HSP 1 Score: 257 bits (656), Expect = 2.000e-75 Identity = 124/138 (89.86%), Postives = 132/138 (95.65%), Query Frame = 1
Query: 1129 VIYVLFIAGIWSVVHMTQLVSVAKSTTLVNVLHGLITFYFFHWTKGSPDEFSQGEWNGLTFWEQLDAGVPWTKTKKFMMIVPTVLCLIPLVVSDYEPRYVAVNLPVCFVLLLAKSPLMHRVRILHINATPGIDDRVKK 1542
V+YVLFIA IW VVHMTQ+ SVAKSTT+VNV+HGLITFYFFHWTKGSPDEF+QGEWNGLTFWEQLDAGVPWTKTKKFMMIVPTVLCLIPLVVSDY+PRY+AVNLPVC +LLLAKSPLMHRVRIL INAT GIDDRVKK
Sbjct: 47 VMYVLFIATIWGVVHMTQIFSVAKSTTMVNVVHGLITFYFFHWTKGSPDEFTQGEWNGLTFWEQLDAGVPWTKTKKFMMIVPTVLCLIPLVVSDYQPRYLAVNLPVCCILLLAKSPLMHRVRILDINATTGIDDRVKK 184
BLAST of mRNA_P-fluviatile_contig13.1702.1 vs. uniprot
Match: A0A835ZKI1_9STRA (ORMDL family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKI1_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.760e-55 Identity = 93/135 (68.89%), Postives = 112/135 (82.96%), Query Frame = 1
Query: 1135 YVLFIAGIWSVVHMTQLVSVAKSTTLVNVLHGLITFYFFHWTKGSPDEFSQGEWNGLTFWEQLDAGVPWTKTKKFMMIVPTVLCLIPLVVSDYEPRYVAVNLPVCFVLLLAKSPLMHRVRILHINATPGIDDRVK 1539
YV F+ IW+++HMTQL S A+STT++NV+HGL+TF FFHW KGSPDEF+QGEWNGLTFWEQLDAG+PWT TKKF+M+VP +LCL PL+ SDY+ YVAVNLP+ +L AK P MHRVRI+ INAT GIDD K
Sbjct: 50 YVCFVTVIWAILHMTQLFSFAESTTVLNVVHGLVTFLFFHWIKGSPDEFTQGEWNGLTFWEQLDAGLPWTPTKKFLMLVPALLCLPPLLASDYDSFYVAVNLPIFLILETAKLPSMHRVRIMSINATAGIDDLKK 184
BLAST of mRNA_P-fluviatile_contig13.1702.1 vs. uniprot
Match: A0A7S3MHK4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHK4_9STRA) HSP 1 Score: 149 bits (376), Expect = 1.750e-37 Identity = 65/138 (47.10%), Postives = 96/138 (69.57%), Query Frame = 1
Query: 1126 QVIYVLFIAGIWSVVHMTQLVSVAKSTTLVNVLHGLITFYFFHWTKGSPDEFSQGEWNGLTFWEQLDAGVPWTKTKKFMMIVPTVLCLIPLVVSDYEPRYVAVNLPVCFVLLLAKSPLMHRVRILHINATPGIDDRVK 1539
+++Y+ I +W ++H++ S T+ N+ HG+ TF HW KG PD+ +QGE+NGLT +EQ+DAGVPWT TKKF+++VPT+LCLI + Y+P Y+ VN + + ++ K P MHRVRI IN+TPGID+ V+
Sbjct: 31 KIVYIAVILFVWGLIHISTFFSAEDCWTVTNMAHGVTTFVMLHWIKGCPDDSTQGEYNGLTLFEQIDAGVPWTATKKFLILVPTLLCLIACFTASYKPFYIVVNCGIMLICVIGKFPQMHRVRIFGINSTPGIDNAVE 168
BLAST of mRNA_P-fluviatile_contig13.1702.1 vs. uniprot
Match: A0A482T393_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T393_9ARCH) HSP 1 Score: 127 bits (320), Expect = 6.550e-31 Identity = 60/105 (57.14%), Postives = 76/105 (72.38%), Query Frame = 1
Query: 1234 ITFYFFHWTKGSPDEFSQGEWNGLTFWEQLDAGVPWTKTKKFMMIVPTVLCLIPLVVSDYEPRYVAVNLPVCFVLLLAKSPLMHRVRILHINATPGIDDRVKKAD 1548
+TF FHW KG PD+ +QGE+N TF+EQLDAGVPWT KKF+M+VPTV+ I +DY+P YV VN + F+ ++AK P MH VRIL IN+TPGID+ V D
Sbjct: 1 MTFVVFHWIKGCPDDSTQGEYNAFTFYEQLDAGVPWTSQKKFLMLVPTVITWIACYAADYKPFYVIVNCVIFFICIIAKMPQMHGVRILGINSTPGIDNPVLAGD 105
BLAST of mRNA_P-fluviatile_contig13.1702.1 vs. uniprot
Match: A0A024GT30_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GT30_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.810e-30 Identity = 68/141 (48.23%), Postives = 94/141 (66.67%), Query Frame = 1
Query: 1123 FQVIYVLFIAGIWSVVHMTQLVSVAKSTTLVNVLHGLITFYFFHWTKGSPDEF-SQGEWNGLTFWEQLDAGVPWTKTKKFMMIVPTVLCLIPLVVSDYEPRYVAVNLPVCFVLLLAKSPLMHRVRILHINATPGIDDRVKK 1542
F YVL I S + M V + T VNV+HGLI+F HW KGSPD+ S G++ LTF+EQ+D PW+ TKKF+M+VPT++ ++ V +DY+ +++ +N P+ FVL+LAK P HRVRI IN+T GIDD V+K
Sbjct: 36 FWTFYVLVIG--MSYMAMPFFVPANEVWTAVNVIHGLISFGIMHWIKGSPDDSNSMGDYRELTFYEQIDENHPWSGTKKFLMVVPTMIFMLASVTTDYDTQHLMINFPIWFVLILAKLPEFHRVRIFGINSTVGIDDEVRK 174
BLAST of mRNA_P-fluviatile_contig13.1702.1 vs. uniprot
Match: F0W2T9_9STRA (ORM1like protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2T9_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.130e-29 Identity = 67/141 (47.52%), Postives = 93/141 (65.96%), Query Frame = 1
Query: 1123 FQVIYVLFIAGIWSVVHMTQLVSVAKSTTLVNVLHGLITFYFFHWTKGSPDE-FSQGEWNGLTFWEQLDAGVPWTKTKKFMMIVPTVLCLIPLVVSDYEPRYVAVNLPVCFVLLLAKSPLMHRVRILHINATPGIDDRVKK 1542
F YVL I ++ + M LV T VNV+HGL++F HW KGSPD+ S G++ LTF+EQ+D PW+ TKKF+++VPTV+ ++ V +DY+ ++ +N P+ FVL+LAK P HRVRI IN+T GIDD V K
Sbjct: 57 FWTFYVLVIGMLY--MAMPFLVPANDVWTAVNVVHGLVSFGIMHWIKGSPDDSMSMGDYRELTFYEQIDEDHPWSGTKKFLIVVPTVIFMLASVTTDYDTHHLMINFPIWFVLILAKLPEFHRVRIFGINSTVGIDDEVIK 195
BLAST of mRNA_P-fluviatile_contig13.1702.1 vs. uniprot
Match: K3WUL0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUL0_GLOUD) HSP 1 Score: 127 bits (318), Expect = 3.140e-29 Identity = 61/113 (53.98%), Postives = 83/113 (73.45%), Query Frame = 1
Query: 1207 TLVNVLHGLITFYFFHWTKGSPDEF-SQGEWNGLTFWEQLDAGVPWTKTKKFMMIVPTVLCLIPLVVSDYEPRYVAVNLPVCFVLLLAKSPLMHRVRILHINATPGIDDRVKK 1542
T+VNV+HG++TF HW KGSPD+ S G++ LTF+EQ+D G PWT TKKF+MIVPT L ++ + +DY+ ++ +NLP+ VL+LAK P + RVRI IN+T GIDD KK
Sbjct: 106 TVVNVVHGIVTFGIMHWIKGSPDDSNSMGDYRELTFYEQIDQGHPWTGTKKFLMIVPTALFMLACIATDYDTVHLCINLPIWAVLILAKLPELDRVRIFGINSTVGIDDVAKK 218
BLAST of mRNA_P-fluviatile_contig13.1702.1 vs. uniprot
Match: A0A5D6XMZ5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMZ5_9STRA) HSP 1 Score: 124 bits (311), Expect = 4.900e-29 Identity = 60/113 (53.10%), Postives = 83/113 (73.45%), Query Frame = 1
Query: 1207 TLVNVLHGLITFYFFHWTKGSPDEFSQ-GEWNGLTFWEQLDAGVPWTKTKKFMMIVPTVLCLIPLVVSDYEPRYVAVNLPVCFVLLLAKSPLMHRVRILHINATPGIDDRVKK 1542
T+VNV+HG++TF HW KGSPD+ + G++ LTF+EQ+D G PWT TK+F+MIVPTVL ++ V +DY+ ++ +NLP+ L+LAK P + RVRI IN+T GIDD KK
Sbjct: 46 TVVNVVHGIVTFGIMHWIKGSPDDSNMMGDYRELTFYEQIDQGHPWTGTKRFLMIVPTVLFMLASVSTDYDTLHLCINLPIWATLILAKLPELDRVRIFGINSTVGIDDVAKK 158
BLAST of mRNA_P-fluviatile_contig13.1702.1 vs. uniprot
Match: W7TSM3_9STRA (Ormdl family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSM3_9STRA) HSP 1 Score: 125 bits (313), Expect = 8.900e-29 Identity = 63/137 (45.99%), Postives = 90/137 (65.69%), Query Frame = 1
Query: 1132 IYVLFIAGIWSVVHMTQLVS---VAKSTTLVNVLHGLITFYFFHWTKGSPDEFSQGEWNGLTFWEQLDAGVPWTKTKKFMMIVPTVLCLIPLVVSDYEPRYVAVNLPV-CFVLLLAKSPLMHRVRILHINATPGIDD 1530
+Y+ F+A +++ +T L + + T+ +V+H ++ FY FHW KGSPD FSQGE+NGLT WEQ++ G+PWTKTKK +V T L V+DY+ Y+A+N PV F+ ++ K P MHRVR+ N T GIDD
Sbjct: 40 LYLGFVAFFVTLLRLTVLSKPEDLGRVLTVTHVVHNMVFFYLFHWIKGSPDNFSQGEFNGLTLWEQIEDGIPWTKTKKLFFLVHTALVFAASYVTDYDFSYLAINAPVYVFLGIIPKIPEMHRVRVFGWNKTAGIDD 176
BLAST of mRNA_P-fluviatile_contig13.1702.1 vs. uniprot
Match: A0A662WYE6_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYE6_9STRA) HSP 1 Score: 114 bits (284), Expect = 7.630e-26 Identity = 53/103 (51.46%), Postives = 74/103 (71.84%), Query Frame = 1
Query: 1234 ITFYFFHWTKGSPDEFSQGEWNGLTFWEQLDAGVPWTKTKKFMMIVPTVLCLIPLVVSDYEPRYVAVNLPVCFVLLLAKSPLMHRVRILHINATPGIDDRVKK 1542
++F HW KGSPD+ S G++ LTF+EQ+D G PWT TKKF+M++PT+L L V +DY+ R++ +N P+ L+LAK P + RVRI IN+T GIDD+ KK
Sbjct: 22 VSFGIMHWIKGSPDDNSMGDYRELTFYEQIDQGHPWTGTKKFLMMIPTLLFLAASVATDYDTRHLLINFPIWATLILAKLPELDRVRIFGINSTVGIDDQGKK 124
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 258.1 |
| Seed ortholog evalue | 5.2e-66 |
| Seed eggNOG ortholog | 2880.D7FKJ6 |
| Preferred name | ORMDL3 |
| GOs | GO:0001775,GO:0002178,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005886,GO:0006629,GO:0006643,GO:0006665,GO:0006672,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0006986,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010556,GO:0012505,GO:0012506,GO:0016020,GO:0016021,GO:0016192,GO:0017059,GO:0019216,GO:0019222,GO:0019725,GO:0030141,GO:0030176,GO:0030659,GO:0030667,GO:0031090,GO:0031211,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031410,GO:0031982,GO:0031984,GO:0032940,GO:0032991,GO:0033554,GO:0034248,GO:0034249,GO:0034620,GO:0034641,GO:0035339,GO:0035579,GO:0035966,GO:0035967,GO:0036230,GO:0042119,GO:0042175,GO:0042221,GO:0042581,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043299,GO:0043312,GO:0043603,GO:0044087,GO:0044237,GO:0044238,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0045833,GO:0046890,GO:0046903,GO:0048519,GO:0048523,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051055,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051716,GO:0055082,GO:0055088,GO:0060255,GO:0065007,GO:0065008,GO:0070887,GO:0071310,GO:0071704,GO:0071944,GO:0080090,GO:0090153,GO:0090155,GO:0090156,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098827,GO:0099503,GO:1900060,GO:1901564,GO:1902494,GO:1905038,GO:1905961,GO:1990234,GO:2000303 |
| EggNOG free text desc. | negative regulation of ceramide biosynthetic process |
| EggNOG OGs | COG5081@1,KOG3319@2759 |
| COG Functional cat. | P |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | ORMDL family |
| Ec32 ortholog | Ec-12_001830.1 |
| Exons | 3 |
| Model size | 3571 |
| Cds size | 906 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815549.0608077-UTR-P-fluviatile_contig13:850269..850914 | 1622815549.0608077-UTR-P-fluviatile_contig13:850269..850914 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 850270..850914 + |
| 1693562220.5131474-UTR-P-fluviatile_contig13:850269..850914 | 1693562220.5131474-UTR-P-fluviatile_contig13:850269..850914 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 850270..850914 + |
| 1622815549.15034-UTR-P-fluviatile_contig13:853409..855429 | 1622815549.15034-UTR-P-fluviatile_contig13:853409..855429 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 853410..855429 + |
| 1693562220.5537274-UTR-P-fluviatile_contig13:853409..855429 | 1693562220.5537274-UTR-P-fluviatile_contig13:853409..855429 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 853410..855429 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815549.0761068-CDS-P-fluviatile_contig13:850914..851502 | 1622815549.0761068-CDS-P-fluviatile_contig13:850914..851502 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 850915..851502 + |
| 1693562220.5243268-CDS-P-fluviatile_contig13:850914..851502 | 1693562220.5243268-CDS-P-fluviatile_contig13:850914..851502 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 850915..851502 + |
| 1622815549.124915-CDS-P-fluviatile_contig13:852010..852159 | 1622815549.124915-CDS-P-fluviatile_contig13:852010..852159 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 852011..852159 + |
| 1693562220.533812-CDS-P-fluviatile_contig13:852010..852159 | 1693562220.533812-CDS-P-fluviatile_contig13:852010..852159 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 852011..852159 + |
| 1622815549.137405-CDS-P-fluviatile_contig13:853240..853409 | 1622815549.137405-CDS-P-fluviatile_contig13:853240..853409 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 853241..853409 + |
| 1693562220.5438378-CDS-P-fluviatile_contig13:853240..853409 | 1693562220.5438378-CDS-P-fluviatile_contig13:853240..853409 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 853241..853409 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1702.1 >prot_P-fluviatile_contig13.1702.1 ID=prot_P-fluviatile_contig13.1702.1|Name=mRNA_P-fluviatile_contig13.1702.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=302bp
MSEPSFVFACGVLVGAITHDPSSLGRGRGTSFALRSLPPDSPEVCECVPL QGCQPVYRRLFRRHPRDLCVRALLRCRNYFSPRPLRQSAGLINCGNKIVS DFDTGKLCRRKAAVAQMHSFMRRCKCVFVLFCVKLLLRRKWVLHGRFSHF PPQIPCLCAFQVIYVLFIAGIWSVVHMTQLVSVAKSTTLVNVLHGLITFY FFHWTKGSPDEFSQGEWNGLTFWEQLDAGVPWTKTKKFMMIVPTVLCLIP LVVSDYEPRYVAVNLPVCFVLLLAKSPLMHRVRILHINATPGIDDRVKKA D* back to topmRNA from alignment at P-fluviatile_contig13:850270..855429+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig13.1702.1 ID=mRNA_P-fluviatile_contig13.1702.1|Name=mRNA_P-fluviatile_contig13.1702.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5160bp|location=Sequence derived from alignment at P-fluviatile_contig13:850270..855429+ (Porterinema fluviatile SAG_2381) GCGAGTGCGAGACTGGTCTGCTTGCACCACGACTCCCACGTGCTTTCACA
CCACACTTCCCTCTTGAGATTGTTGGGAGTAGATAATGGCTTTGAAGATA
CGTTTGCAATCACGCGACAAATCTCGGCCAGCGTTCAGGGAGATATCTCG
TGCAAACACACTGCGGTCTACCAGCAGCAAGAGAATCTCGGGTGAGTATG
CGAAACTCATTCCAACTTTTAGCAAATCTATCACTGTAGAACCTAGGGGC
GGGGAGAAACAGGGGTTACCCACCAAAGTTCTTCATCTCTGTCTAATGCC
GGCACAGCAGCTGCGAAGAGAGCGGTCAAAGATGAAGATTTAGTTGCTGC
GAAACGCGGCAGCCAAGGGGCTGATTCGGGATTTAAACAGCGGAAGAGCT
CTCTAACCGCCAAGTCAGCCACTCATGTACGCGGGGCGGTGGACAAGCAC
GTTATTGTCGCGGTAGCATCTCGACCGAGCGAGCGGCGCTTGTCAACCGA
GCTACGGCTCGGCCAGCGGCTCCTCTCTTGTTGGGCCACTCTCGGCTGTT
CACGTCTGTCTGGTTGTCTGTCTGCCTCCTCCTGCCTGTCTATCTGTCTG
TCTCCTCTCTGTCTGTCTATCTGTCTGTCTCCTCTCTGCTTGTCTATGTC
TGAACCTTCGTTTGTGTTCGCGTGCGGGGTGCTTGTCGGGGCCATCACGC
ACGACCCTAGTTCTCTGGGCAGAGGACGAGGGACATCCTTTGCACTCAGA
TCTTTGCCCCCCGACAGCCCAGAAGTTTGTGAGTGTGTGCCTCTTCAAGG
GTGCCAGCCAGTATACAGGCGACTTTTTCGGCGTCATCCACGAGATCTGT
GCGTCCGTGCACTCTTGAGGTGTAGGAACTATTTTTCGCCCCGCCCCCTG
CGACAATCGGCAGGATTGATCAATTGCGGCAATAAAATAGTTTCGGACTT
CGACACGGGGAAACTCTGCCGTCGAAAGGCGGCAGTGGCACAAATGCATT
CATTCATGCGGCGGTGCAAGTGTGTATTTGTACTCTTTTGTGTAAAATTG
CTTCTCCGCAGGAAATGGGTTTTACACGGACGCTTCTCCCACTTTCCCCC
CCAAATTCCGTGTTTGTGCGCATTTCAGGTAATCTACGTCCTCTTCATCG
CGGGCATCTGGAGCGTGGTTCATATGACGCAGCTTGTCAGTGTCGCCAAG
TCCACAACGCTTGTCAACGTACTGCACGGCTTGGTGGGTGGTTCGGGCCC
ACTTGTTTTACCGGCTCAGGCTATGGAGGAAGTGTGCTGTTGTGGCTGGC
GCTTGGTGATATGATCATTTGTTTATTTAATGCACCCGGGTTGTAAGGGT
TGGCACGCTTTTCGACATCAGTAAGCCGGTGCATTATCGCAGCGGAGCAA
CTAAATGTCTTCGGCACCGCCAAGGTCCAGCTTCGGGGATACTCCCGTAT
TGACTAGTACATCGCGCCGCCGCCCCACTATCTGTGTCTCGAGCAAGCGG
AGGGAGTGTCCAGGCCCCGCTTGTCGACCCGCCCACAGAGCGCTACGCTC
TTAACGAAGAAGGTCGTATGTTTCCGTTGGGCGTCAACGCTTGCTGGCTT
GCTTTCATCTTGATCACCTGAAAACTGTTTGACGATTGAATGGTTTGTTC
CCTGATGGCGTGGCCTCACGCCGATTCTTATGTCCGGCCCGTCCCCCCCA
ACCCGCTCGTTGCGTATGCGTATTTTTTCGCGAAACGGCAGATAACGTTC
TACTTCTTCCACTGGACGAAGGGTTCCCCAGACGAGTTCAGCCAGGGCGA
GTGGAACGGATTAACGTTTTGGGAGCAGCTGGACGCCGGGGTGCCGTGGA
CGAAGACCAAGAAGTTCATGATGATCGTGCCTACTGTCCTGTGAGTCACC
TGCTGCCTGTTTTATCGCTCCCGGTCGTTTGAGCCCCGGTGTTGGTTAGA
CCGCAGCCAGATTGAGAGGTAGGCCAGATTGAGAGGTAGGCATACCTCTG
TTCTCGGTGCTCTAACCTTGTAGTGTGCGTACGTTTTCGTGGTGTTGGTA
TTGGTTTTTCAAGTTACTGTGGCGGTGATTCCTCTGTTCTGGCAAGGGTG
AGCGGGGTTTATTTGGCTCGAGAGCCATGAAATCAAATCATGGCGAAAAA
ACGACGAGGGTCGTCCAGAGTAGACACTAATGCGTCTTTCTCGTGTGAAG
AACTGATCAATCTGTGAATCATCACTTTTTGTGTGGAAAGTACCGTTTCC
GTCCCATCCTTCCTCAAAGCGGTGAGAACACGATGCTTTTCGATGTGCTC
GCTTGTACGTCATGCCTTAGCCATCTTATCTATGCACATCAGTTTACATT
ATGACATCTTTGGCACAACGCATCGTTGTGGTGCTGCTTTCTCAGATCAT
GAGTGGGCATGATTTTTTTCTATTGCTGGGAGTAGCTTCGACGCTTACGG
CGTGTGGCGCAATCAGACCAGCACACGTTATGAGCATCCCGTCGATAGTG
GGAGTTTCCTTAGAAGTCACCAAAAATGTCCGCGCGGCATTTGGCTCCCT
TGCCAGGTGGTCGTCTGCCCATGCCGTGCCGCGCCGTCCCGTCCTGTCCC
GCTCCATGCTGTGCCGCCGTGTACTCGGTCCCCTCGGTGGCACGCCCGAA
TTCTCTCTGTTCGTTGCGAAGTTGTGATCACGCTGACGCCATCCCTCGCC
GTGCGTGTCGTTGGGGGGCGTGGCCGGCCGATGGGTTCCCACTCTAGACC
ATTGGGCACGCAGGCGGCATCCCAGGGATCTTAACGTTCTCGCTGGCGCA
CACAGTAAGTAGCGCGCAGCAGTTAAGGAACACCGTCGGCAACTGCAGTG
CACACCCTCGCTCAATTCTCAGGTTCCGTCCTCACCCCCCGTGCCTCCGC
TCGCCGCCCTCTTCTCTCCCCTATCGCCTCCCTGAAACATTCGCACTGCC
CCTGGCTTGCATCTCCGTCAGCTGCCTCATACCGTTGGTGGTGAGCGACT
ACGAACCGAGATACGTGGCGGTAAACCTCCCGGTGTGCTTCGTCCTCCTG
CTGGCGAAGTCCCCCCTGATGCACCGGGTTCGCATACTCCACATCAACGC
CACGCCCGGGATCGACGACCGCGTGAAGAAGGCGGATTGATTTGATAATC
GATCTGACTCGACTCTTGACCCGTCGAATCGAATTAGAACTACAATCAAA
CCTCTTCGACGCGTTGTCGTCGACCACGGAAGGGGCAGGGGAGAGGGGAC
GCCGCGAGACCAGGGGTTTGGCAATGCGGCTAGTGCGTGTTACGACCGAC
GGGGGATGGGGTGGGCACGCTGGAAGGCAGTGTTCGACAAAAGGGAGGCC
CCGCCGTCTAGAGAAACCTTGCGGAACCCCGTTGCTCATCTAGGACACCG
CGGGGGGATGCAGCCAGGCAGACAAGCAGGCAGGCGAGCAGGCGGGCAAG
CAGTATGTCGCCTCTGGACACACGGGGTCACTGCGAGCCCGATGCGTTCA
TTTTTTGCGTGATTCTACGGTCATCTTGGGCTGCCGAGCAAACTCACAAC
ACGGCACACGGAAGACGGCCCACGGGGTCGACGAACGCGCTCACCATGGA
TCGGCGGGGTCACGGCAGGCTGAAATGAACGGGAAGGGAAGGGACACGGA
GGAACTGGCCAGCGGCCAGACGGCAATAGGGAAGGCAAAAACGAACATGG
GCTTTGAGCGGGGACTTTTTTGTTTTATTTTCACGTAACGGCCTCGCGGC
TTTGTTGAGTTCCTGTCGCGCAGGTCTAAAGTTGCTGTTGCACCCGGTGT
TCAACGTCCCGGCAGGCAGTTTTTGCCAACGGACGCGGTGCTACGGAGCA
CCGTTTCCTGGTTTGCCGTAGACGTCCCGTGCACCTCCCCTCCTCCCCCC
AAAGTACTCAATCGAATTACGAAGAGGTGCATGGATGGCTGGCTGGCCAA
CGTTACCGTTTGCTGCCTGCTGCACCGGCACGGGCCGGGGTGTTTGCGAG
TCTCCTTTGCCTCCGTCGCGCCCCGCCACTGCGGTTTTTCGGCATGCATG
TGCGGACAACGTGACGCCTTCGCGGCGACCCCCTCGACCTGCTAGCGCGA
CCTAATACCTCGGCCTATGTGCGTCTTGTGAGGAGTGGTGAGGCTGCGCT
CGCCGTCGCTTCGGAGGCAAGGAAAGAGAAGGCGGGCAGCGTTATAGCGG
TCTATAAAAACGCAACCGGTGCGATATCGCGTCCTGGCCCGCTAGAAAGG
ACACAGCAGCGTGTAGCGCACGTGTTGTTTTTTCGCCATGGAGACAGTCG
GCAGTCGGTTTTCAGGCGTTCTTCCGGGTGTTTTTTACATCTCTCCCTTC
TCCCGTATGATTTCCAACTCGTGGCTCGGTGTTTGATTTTCCCTCTTACA
GCGTCGATTACCCAAAGGGCGTCTGAATTGTTTCGGGAGGTGATGCCCGT
CTTGTCTTCCCGATTTCCTTTGTTTTGTAGCACGGGGGGGGCAGGGAATT
GCGCGCGTTCATCACGATTCGGCGAGCTTGGTCGTTCCCTTTGCCCAACA
CCGCCTCGCAGCAGCAGCGGCGGCAGCCGCAGCGTCACATCATCCGTTTT
GTTGGACTCGCCAGGGCGCATCGGATGTGGCGGTGGCGTAGGTATTGCGT
TGAACGATGGTGATCAGCGATGCTTTATTCACTTGGTGAACGGATTCTTT
GAGGTGTGTTCCTATCCGTATGTACAGCGGCTGCACCGGTCTTAAGGCTG
CGGCCGAGTTTTGTTTCGTCCGCGTTAAGAAGGCGGCGCCGTGTCAATAT
ATGTGAATACCAATACATGCGCCTCGGCGACAAGACCAGTGTTTTCTTGG
CTCTGATTGCTATGTAGTGCGGGAAAGACGGGCCACGCATGCGACACAAA
ATCCATGCTGAATGAGGAGGCAGCATGAGTGCTGGGTTCAGTCAGTACTT
CAAATTTCAAACTCAAATGCACGTGAATCGGCCTCGGACAAGGGCATGTG
TGTGCCAAGATTTTCCGGGTCCCAGGCCTTGTGCCGCCAAGGATTGGTGA
GGCACACGTGGCGACTAGAGCTTGTTTCTACACGAGAAGTAACTCGCTGT
CTAGTGTGGACACTGAGGAAGGAGAGTGCCGAACTGTTCTCGCTGCAAAA
ACTGACGGCA back to topCoding sequence (CDS) from alignment at P-fluviatile_contig13:850270..855429+ >mRNA_P-fluviatile_contig13.1702.1 ID=mRNA_P-fluviatile_contig13.1702.1|Name=mRNA_P-fluviatile_contig13.1702.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1812bp|location=Sequence derived from alignment at P-fluviatile_contig13:850270..855429+ (Porterinema fluviatile SAG_2381) ATGTCTGAACCTTCGTTTGTGTTCGCGTGCGGGGTGCTTGTCGGGGCCAT CACGCACGACCCTAGTTCTCTGGGCAGAGGACGAGGGACATCCTTTGCAC TCAGATCTTTGCCCCCCGACAGCCCAGAAGTTTGTGAGTGTGTGCCTCTT CAAGGGTGCCAGCCAGTATACAGGCGACTTTTTCGGCGTCATCCACGAGA TCTGTGCGTCCGTGCACTCTTGAGGTGTAGGAACTATTTTTCGCCCCGCC CCCTGCGACAATCGGCAGGATTGATCAATTGCGGCAATAAAATAGTTTCG GACTTCGACACGGGGAAACTCTGCCGTCGAAAGGCGGCAGTGGCACAAAT GCATTCATTCATGCGGCGGTGCAAGTGTGTATTTGTACTCTTTTGTGTAA AATTGCTTCTCCGCAGGAAATGGGTTTTACACGGACGCTTCTCCCACTTT CCCCCCCAAATTCCGTGTTTGTGCGCATTTCAGGTAATCTACGTCCTCTT CATCGCGGGCATCTGGAGCGTGGTTCATATGACGCAGCTTGTCAGTGTCG CCAAGTCCACAACGCTTGTCAACGTACTGCACGGCTTGATGTCTGAACCT TCGTTTGTGTTCGCGTGCGGGGTGCTTGTCGGGGCCATCACGCACGACCC TAGTTCTCTGGGCAGAGGACGAGGGACATCCTTTGCACTCAGATCTTTGC CCCCCGACAGCCCAGAAGTTTGTGAGTGTGTGCCTCTTCAAGGGTGCCAG CCAGTATACAGGCGACTTTTTCGGCGTCATCCACGAGATCTGTGCGTCCG TGCACTCTTGAGGTGTAGGAACTATTTTTCGCCCCGCCCCCTGCGACAAT CGGCAGGATTGATCAATTGCGGCAATAAAATAGTTTCGGACTTCGACACG GGGAAACTCTGCCGTCGAAAGGCGGCAGTGGCACAAATGCATTCATTCAT GCGGCGGTGCAAGTGTGTATTTGTACTCTTTTGTGTAAAATTGCTTCTCC GCAGGAAATGGGTTTTACACGGACGCTTCTCCCACTTTCCCCCCCAAATT CCGTGTTTGTGCGCATTTCAGGTAATCTACGTCCTCTTCATCGCGGGCAT CTGGAGCGTGGTTCATATGACGCAGCTTGTCAGTGTCGCCAAGTCCACAA CGCTTGTCAACGTACTGCACGGCTTGATAACGTTCTACTTCTTCCACTGG ACGAAGGGTTCCCCAGACGAGTTCAGCCAGGGCGAGTGGAACGGATTAAC GTTTTGGGAGCAGCTGGACGCCGGGGTGCCGTGGACGAAGACCAAGAAGT TCATGATGATCGTGCCTACTGTCCTATAACGTTCTACTTCTTCCACTGGA CGAAGGGTTCCCCAGACGAGTTCAGCCAGGGCGAGTGGAACGGATTAACG TTTTGGGAGCAGCTGGACGCCGGGGTGCCGTGGACGAAGACCAAGAAGTT CATGATGATCGTGCCTACTGTCCTCTGCCTCATACCGTTGGTGGTGAGCG ACTACGAACCGAGATACGTGGCGGTAAACCTCCCGGTGTGCTTCGTCCTC CTGCTGGCGAAGTCCCCCCTGATGCACCGGGTTCGCATACTCCACATCAA CGCCACGCCCGGGATCGACGACCGCGTGAAGAAGGCGGATTGACTGCCTC ATACCGTTGGTGGTGAGCGACTACGAACCGAGATACGTGGCGGTAAACCT CCCGGTGTGCTTCGTCCTCCTGCTGGCGAAGTCCCCCCTGATGCACCGGG TTCGCATACTCCACATCAACGCCACGCCCGGGATCGACGACCGCGTGAAG AAGGCGGATTGA back to top
|