mRNA_P-fluviatile_contig13.1694.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1694.1 vs. uniprot
Match: D7FKI5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKI5_ECTSI) HSP 1 Score: 258 bits (658), Expect = 2.960e-81 Identity = 132/206 (64.08%), Postives = 162/206 (78.64%), Query Frame = 1
Query: 175 LASEMACLDSDATHVYDGAFTHCTVATLSSFKNCRSVFFHASPADQDRIIQAWHESLVDALAQQAGDLHPFELVFRSLETSPAATFLQADDRSKTLTALRSAVKKASENPLLGDLSVELEDKYRGAHPDLCSLMDALHVPDIVHSTVMRLASQPSDGGQRLAQGLAELGRRWDPVAVKVEEMTLVHEQLPYMHLRREGAVARRFNL 792
+A EMA LD YDG +THCTVATLSSFKN RSVF HAS AD+DRII+AWH++L A A+ G L PF++VFRSLETSPAATFL DD SKT+ ALRSAVK+A+ NP L +LS ELE+KY GAHPDL SL D +H+P+I+HSTVMR+AS+ SD G RL +GLA+LG RW+P V+V +++LV+E+ PYMHL REGA AR + L
Sbjct: 1 MAKEMASLDESILS-YDGEYTHCTVATLSSFKNSRSVFCHASAADRDRIIEAWHQALTAAFARTEG-LRPFDIVFRSLETSPAATFLLGDDSSKTVEALRSAVKEAARNPKLSELSAELENKYEGAHPDLFSLGDGVHIPNIIHSTVMRVASEVSDEG-RLGEGLADLGARWEPTTVRVGKISLVYEKHPYMHLSREGAEARSYRL 203
BLAST of mRNA_P-fluviatile_contig13.1694.1 vs. uniprot
Match: A0A812WJ60_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WJ60_SYMMI) HSP 1 Score: 81.3 bits (199), Expect = 5.510e-13 Identity = 75/255 (29.41%), Postives = 108/255 (42.35%), Query Frame = 1
Query: 70 DPFASALKGGEGVGCSGLVLVVAWGW---GSQDGGYQRLASEMACLDSDAT------HVYDGAFTHCTVATLSSFKNCRSVF-----FHASPADQDR-----IIQAWHESLVDALAQQAGDL-HPFELVFRSLETSPAATFLQADDRSKTLTALRSAVKKASENPLLGDLSVELEDKYRGAHPDLCSLMDALHVPDIVHSTVMRLASQPSDGGQRLAQGLAELGRRWDPVAVKVEEMTLVHEQLPYMHLRREGAV 774
D +A AL G GLV+ W W G Y LA E+ L++D +VY + HCTVATLSSFK S F A++ R +++ W A+ +Q L P + +E +A L +R AV+ A+E+ + + G P L +H+P I HST +R +PS L L E+ RW P V++ M LV+E PYMH+ E +
Sbjct: 88 DTYAEALAKGIECEVHGLVIPYGWTWCHEGPILRAYTALAEEIHSLEADVDFAGRCCYVYAPSELHCTVATLSSFKEVDSYFATLELVQGRSAEEARELRREVMELWK----GAVERQFTALPSPPQATLDRIEVCESAIIFHLQPLDDALERMRVAVRAAAEDNSFREYEIN-----SGLSP--YELTRLIHIPKISHSTFVRFRKRPSP---ELRSRLQEVVGRWTPHRVEMHGMKLVYENRPYMHIDVESTI 328
BLAST of mRNA_P-fluviatile_contig13.1694.1 vs. uniprot
Match: A0A0M0J9H0_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J9H0_9EUKA) HSP 1 Score: 78.6 bits (192), Expect = 6.980e-13 Identity = 71/256 (27.73%), Postives = 109/256 (42.58%), Query Frame = 1
Query: 64 YADPFASALKGGE---GVGCSGLVLVVAWGWGS----QDGGY-QRLASEMACLDSDATHVYDGAFTHCTVATLSSFKNCRSVFFHASPADQDRIIQAWHESLVDALAQQAGDLHPFELVFRSLETSPAATFLQADDRSKTLTALRSAVKKASENPLLGDLSVE----------LEDKYRGAHPDLCSLMDALHVPDIVHSTVMRLASQPSDGGQRLAQGLAELGRRWDPVAVKVEEMTLVHEQLPYMHLRREGAVA 777
+A+P + L G+ G GLVLV AW S Q G ++L +E+ A +VY + HCT+ATL +F + + + + W L A A P L + AA L+ D + A+R+A++ A G ++VE L G P H+PDIVHST++R ++P D A+ A + + W P+ + V V E+LPYMH+ G +
Sbjct: 4 WANPTVARLAAGDRFDGENVCGLVLVCAWPMPSDVQSQAGSLCEKLRAELPA----AAYVYPPSTLHCTIATLRAFTHGAM-----DSSAVEACVALWEPVLAKAKASPTWPTQPVRLRMEAPTLEGAAGILRYADLDGAIAAMRAALRDAI--VAAGGVAVEGGGDRSLGTPLNGAPEGEVPP--------HIPDIVHSTLVRWTAEPDDRAAA-AEAFARVAQSWTPLELTVPRAIAVFERLPYMHMLAAGGAS 239
BLAST of mRNA_P-fluviatile_contig13.1694.1 vs. uniprot
Match: A0A1Q9ETY8_SYMMI (Fibronectin type-III domain-containing protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9ETY8_SYMMI) HSP 1 Score: 73.2 bits (178), Expect = 2.960e-10 Identity = 56/215 (26.05%), Postives = 96/215 (44.65%), Query Frame = 1
Query: 118 GLVLVVAWGWGSQD-GGYQRLASEMACLDSDATHVYDGAFTHCTVATLSSFKNCRSVFFHASPADQDRIIQAWHESLVDALAQQAGDLHPFELVFRSLETSPAATFLQADDRSKTLTALRSAVKKASENPLLGDLSVELEDKYRGAHPDLCSLMD-ALHVPDIVHSTVMRLASQPSDGGQRLAQGLAELGRRWDPVAVKVEEMTLVHEQLPYMHL 756
GLV+V +W Y+ ++A +VY G HCT+ TL +F + R +++ R ++W + L A P L +A + +D + T+ A+R A++ A G+ + D+ + P + A H+PDIVHSTV+R ++P+D + A++ W+PV + V E +PYMH+
Sbjct: 326 GLVVVCSWPMPQPVLEQYELFREKLAAAMPKEAYVYPGTTLHCTICTLRAFTSGRM-----ESSEKQRSSESWSKILDAARRDPGWPTGPVALKMGRPTLEGSAGIFRYEDTAGTIAAMRKALRAAI-IAAGGEPAEGGGDRSKAKPPSGTPEGEPAPHIPDIVHSTVLRWTAEPADRAAA-QEAFAQVAESWEPVEIIATAPRAVFEDIPYMHI 533
BLAST of mRNA_P-fluviatile_contig13.1694.1 vs. uniprot
Match: A0A812J742_SYMPI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812J742_SYMPI) HSP 1 Score: 55.5 bits (132), Expect = 1.730e-5 Identity = 48/182 (26.37%), Postives = 75/182 (41.21%), Query Frame = 1
Query: 214 HVYDGAFTHCTVATLSSFKNCRSVFFHASPADQDRIIQAWHESLVDALAQQAGDLHPFELVFRSLETSPAATFLQADDRSKTLTALRSAVK----KASENPLLGDLSVELEDKYRGAHPDLCSLMD-ALHVPDIVHSTVMRLASQPSDGGQRLAQGLAELGRRWDPVAVKVEEMTLVHEQLP 744
+VY G HCTV TL +F + SP + ++W L A A P L +A + +D + + A+R A++ A P G D+ R P + A H+PDIVHSTV+R ++P+D + A + W+P+ + V E +P
Sbjct: 2 YVYPGHTLHCTVCTLRAF-----LAGPMSPELRQSTAESWSRILDAARKDAAWPTGPIVLKMGRPTLEGSAGIFRYEDTAGAVAAMRKALRGAILAAGGEPAEGG-----GDRSRAKPPSGTPEGEPAPHIPDIVHSTVLRWTAEPADRAAA-QEAFARVAESWEPLEIVATAPRAVFEDIP 172 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1694.1 >prot_P-fluviatile_contig13.1694.1 ID=prot_P-fluviatile_contig13.1694.1|Name=mRNA_P-fluviatile_contig13.1694.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=256bp MSHTTAAFYADPFASALKGGEGVGCSGLVLVVAWGWGSQDGGYQRLASEMback to top mRNA from alignment at P-fluviatile_contig13:782571..785678- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1694.1 ID=mRNA_P-fluviatile_contig13.1694.1|Name=mRNA_P-fluviatile_contig13.1694.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3108bp|location=Sequence derived from alignment at P-fluviatile_contig13:782571..785678- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:782571..785678- >mRNA_P-fluviatile_contig13.1694.1 ID=mRNA_P-fluviatile_contig13.1694.1|Name=mRNA_P-fluviatile_contig13.1694.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1536bp|location=Sequence derived from alignment at P-fluviatile_contig13:782571..785678- (Porterinema fluviatile SAG_2381)back to top |