mRNA_P-fluviatile_contig13.1686.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1686.1 vs. uniprot
Match: D7FKH7_ECTSI (40S ribosomal protein S3a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH7_ECTSI) HSP 1 Score: 466 bits (1198), Expect = 5.770e-162 Identity = 233/249 (93.57%), Postives = 239/249 (95.98%), Query Frame = 1
Query: 1 GKTNKKSGRKGNKKKTVDPMTLKEWYDIKAPSTFQVRNPGKTLVTRTKGTKIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRISCIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEAASKCDLRGLVLEFIPENISGAILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMERDEEVAEV 747
GKTNKK GRKGNKKKTVDPMTLKEWYDIKAPS FQVRNPGKTLVTRTKGTKIASEGLKGRVFEFSLGDLN DEDLGYRK+KLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIE QVDVRTTDGYLLRISCIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIM+E ASKCDLR LVL+FIPENISG ILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTED+GMEMER++E E
Sbjct: 4 GKTNKKGGRKGNKKKTVDPMTLKEWYDIKAPSIFQVRNPGKTLVTRTKGTKIASEGLKGRVFEFSLGDLNADEDLGYRKVKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEGQVDVRTTDGYLLRISCIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMSEEASKCDLRELVLKFIPENISGEILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDIGMEMEREDEGEEA 252
BLAST of mRNA_P-fluviatile_contig13.1686.1 vs. uniprot
Match: A0A835Z1K4_9STRA (40S ribosomal protein S3a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1K4_9STRA) HSP 1 Score: 353 bits (907), Expect = 9.760e-118 Identity = 179/243 (73.66%), Postives = 201/243 (82.72%), Query Frame = 1
Query: 1 GKTNKKSGRKGN-KKKTVDPMTLKEWYDIKAPSTFQVRNPGKTLVTRTKGTKIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRISCIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEAASKCDLRGLVLEFIPENISGAILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMER 726
GKT KK G+KG KKKTVDP T KEWYDIKAPSTF VRN GKTL+TRT GTKIASEGLKGRVFE SLGDLNNDE+ G+RKIKLCCEDVQGT+ LT FHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGY LR+ CIGFTKK D Q+K TCYA+A+Q+RA+R+KM +IMT+ SKCDL+ LV +F+ + +S I KA + I P+QNV IRK K LKKPKFDLTKLMEMH TED G + R
Sbjct: 4 GKTQKKIGKKGKGKKKTVDPFTRKEWYDIKAPSTFAVRNAGKTLITRTTGTKIASEGLKGRVFEVSLGDLNNDEEHGFRKIKLCCEDVQGTNCLTTFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYYLRVFCIGFTKKTDGQVKATCYAKAAQVRAIRRKMTEIMTDECSKCDLKELVQKFVLDTVSERITKAARGIVPLQNVLIRKCKVLKKPKFDLTKLMEMH----TEDAGAAVAR 242
BLAST of mRNA_P-fluviatile_contig13.1686.1 vs. uniprot
Match: A0A7S2Y1J4_9STRA (40S ribosomal protein S3a n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1J4_9STRA) HSP 1 Score: 344 bits (882), Expect = 1.360e-113 Identity = 171/234 (73.08%), Postives = 196/234 (83.76%), Query Frame = 1
Query: 25 RKGNKKKTVDPMTLKEWYDIKAPSTFQVRNPGKTLVTRTKGTKIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRISCIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEAASKCDLRGLVLEFIPENISGAILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMER 726
+KG KKK DP KEWYD+KAPS F R PGKTL+TRT+GTKIASEGL+GRVFEFSL DLN+DE+ YRKIKLC E+VQGTS LTNFHGMDLTRDKLCSLIKKWQTLIEA+VDV+TTDGY +R+ CIGFTK+ NQIK+T YAQASQ++A+RKKM DIMTE A KCDL+ LV +FIPE+IS I KA Q I+P+QNV+IRKVK LKKP+FDL KLMEMHGD EDVG + R
Sbjct: 38 KKGGKKKITDPFLKKEWYDVKAPSFFSNRTPGKTLITRTQGTKIASEGLQGRVFEFSLADLNHDEEQAYRKIKLCVEEVQGTSCLTNFHGMDLTRDKLCSLIKKWQTLIEARVDVKTTDGYFMRLFCIGFTKRMPNQIKKTAYAQASQVKAIRKKMVDIMTEEAVKCDLKELVAKFIPESISTEIEKACQGIFPLQNVFIRKVKMLKKPRFDLIKLMEMHGDGG-EDVGAGVSR 270
BLAST of mRNA_P-fluviatile_contig13.1686.1 vs. uniprot
Match: RS3A_ORYSJ (40S ribosomal protein S3a n=56 Tax=Poaceae TaxID=4479 RepID=RS3A_ORYSJ) HSP 1 Score: 325 bits (833), Expect = 1.520e-106 Identity = 163/243 (67.08%), Postives = 193/243 (79.42%), Query Frame = 1
Query: 22 GRKGNKKKTVDPMTLKEWYDIKAPSTFQVRNPGKTLVTRTKGTKIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRISCIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEAASKCDLRGLVLEFIPENISGAILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMERDEEVAEVA 750
G+KG+KKKTVDP K+WYDIKAPS F VRN GKTLV+RT+GTKIASEGLK RVFE SL DL NDED YRKI+L EDVQG +VLTNF GM T DKL SL+KKWQTLIEA VDV+TTDGY+LR+ CIGFTK++ NQ+K+TCYAQASQIR +R+KM +IM AS CDL+ LV +FIPE I I KA SI+P+QNV++RKVK LK PKFDL KLME+HGD ED+G +++R E +A
Sbjct: 12 GKKGSKKKTVDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYAKEDIGTKLDRPAEDEAMA 254
BLAST of mRNA_P-fluviatile_contig13.1686.1 vs. uniprot
Match: A0A7S4E908_9STRA (40S ribosomal protein S3a n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E908_9STRA) HSP 1 Score: 325 bits (834), Expect = 3.100e-106 Identity = 164/251 (65.34%), Postives = 191/251 (76.10%), Query Frame = 1
Query: 25 RKGNKKKTVDPMTLKEWYDIKAPSTFQVRNPGKTLVTRTKGTKIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRISCIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEAASKCDLRGLVLEFIPENISGAILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMERDEEVAEVAEEA*TKLAA 777
+KG KKK VDP KEWY+IKAPS F VRN GKTLVTRT+GTKIAS+ LKGRVFE SLGDLNNDED YRKIKL CEDVQG + LTNFHGM +TRDKL SLIKKWQTL+E VDV+TTDGY LR+ IGFT K NQ+ + CYA ++Q+R +RKKM D+M E ASKCDL+ LVL+ IPE + G I KA I+PMQNV++RKVK LKKPKFDL KLME+H ED G + E D E AE+ T+ A+
Sbjct: 39 KKGGKKKAVDPFLKKEWYEIKAPSMFSVRNCGKTLVTRTQGTKIASDALKGRVFEISLGDLNNDEDQTYRKIKLICEDVQGYNCLTNFHGMGMTRDKLASLIKKWQTLVEGNVDVKTTDGYTLRMFAIGFTTKMPNQVSKMCYANSAQVRQIRKKMVDVMREEASKCDLKDLVLKLIPEYMGGEIEKACAGIFPMQNVFVRKVKVLKKPKFDLVKLMELHSGEGAEDSGDKAEGDAEEVVAAEKDITQAAS 289
BLAST of mRNA_P-fluviatile_contig13.1686.1 vs. uniprot
Match: A0A8J1XLG0_OWEFU (40S ribosomal protein S3a n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XLG0_OWEFU) HSP 1 Score: 323 bits (827), Expect = 1.230e-105 Identity = 158/231 (68.40%), Postives = 191/231 (82.68%), Query Frame = 1
Query: 16 KSGRKGNKKKTVDPMTLKEWYDIKAPSTFQVRNPGKTLVTRTKGTKIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRISCIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEAASKCDLRGLVLEFIPENISGAILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDV 708
KSG+KG KKK VDP + K+WYD+KAPS F +R GKTLVTRT GTKIAS+GLKGRVFE SL DL NDE + +RK KL EDVQG +VLTNFHGMDLTRDKLCS++KKWQTLIEA VDVRTTDG+LLR+ CIGFTKK+ NQIK+TCYAQ++Q+RA+RKKMC+IMT S DL+ +V + IP++I I KA Q IYP+ +VYIRKVK LKKPKFDL KLM++HG+ +++ V
Sbjct: 11 KSGKKGQKKKVVDPFSKKDWYDVKAPSMFNIRQIGKTLVTRTIGTKIASDGLKGRVFEVSLADLQNDE-VAFRKFKLVAEDVQGRAVLTNFHGMDLTRDKLCSMVKKWQTLIEANVDVRTTDGFLLRVFCIGFTKKRQNQIKKTCYAQSTQVRAIRKKMCEIMTREVSANDLKEIVNKLIPDSIGKDIEKACQGIYPLHDVYIRKVKILKKPKFDLGKLMDLHGEGSSKTV 240
BLAST of mRNA_P-fluviatile_contig13.1686.1 vs. uniprot
Match: C5XD92_SORBI (40S ribosomal protein S3a n=6 Tax=Andropogoneae TaxID=147429 RepID=C5XD92_SORBI) HSP 1 Score: 322 bits (826), Expect = 1.800e-105 Identity = 162/242 (66.94%), Postives = 193/242 (79.75%), Query Frame = 1
Query: 22 GRKGNKKKTVDPMTLKEWYDIKAPSTFQVRNPGKTLVTRTKGTKIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRISCIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEAASKCDLRGLVLEFIPENISGAILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMERDEEVAEV 747
G+KG KKKTVDP + K+WYDIKAPS F VRN GKTLV+RT+GTKIASEGLK RVFE SL DL +DED YRKI+L ED+QG +VLTNF GM T DKL SL+KKWQTLIEA VDV+TTD Y+LR+ CIGFTK++ NQ+K+TCYAQASQIR +R+KM +IM+ AS CDL+ LV +FIPE I I KA SI+P+QNV+IRKVK LK PKFD+ KLME+HGD EDVG++M+R E E
Sbjct: 12 GKKGGKKKTVDPFSKKDWYDIKAPSVFSVRNIGKTLVSRTQGTKIASEGLKHRVFEVSLADLQSDEDQAYRKIRLRAEDIQGRNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMTEIMSNQASTCDLKELVSKFIPEVIGKEIEKATSSIFPLQNVFIRKVKILKAPKFDIGKLMEVHGDYAKEDVGVKMDRPAEGDEA 253
BLAST of mRNA_P-fluviatile_contig13.1686.1 vs. uniprot
Match: A0A0D6R8U1_ARACU (40S ribosomal protein S3a n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R8U1_ARACU) HSP 1 Score: 322 bits (824), Expect = 3.260e-105 Identity = 166/246 (67.48%), Postives = 197/246 (80.08%), Query Frame = 1
Query: 22 GRKGNKKKTVDPMTLKEWYDIKAPSTFQVRNPGKTLVTRTKGTKIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRISCIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEAASKCDLRGLVLEFIPENISGAILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMER--DEEVAEVAE 753
G+KG+KKK VDP T K+WYDIKAPSTF RN GKTLVTRT+GTKIAS+GLK RVFE SL DL DED YRKIKL EDVQG +VLTNF GMD T DKL SL++KWQTLIEA VDV+TTD Y LRI CIGFTK++ NQ+K+TCYAQ+SQIR +RKKM +IM AS CDL+ LV +FIPE+I I KA SIYP+QNV++RKVK LK PKFDL KLME+HGD + E+VG++++R +E+ AE E
Sbjct: 12 GKKGSKKKAVDPFTKKDWYDIKAPSTFTTRNVGKTLVTRTQGTKIASDGLKHRVFEVSLADLQGDEDQAYRKIKLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYGLRIFCIGFTKRRPNQVKRTCYAQSSQIRKIRKKMTEIMIREASACDLKELVSKFIPESIGKEIEKATSSIYPLQNVFVRKVKVLKAPKFDLGKLMEVHGDYS-EEVGVKVDRPVEEQPAEATE 256
BLAST of mRNA_P-fluviatile_contig13.1686.1 vs. uniprot
Match: I1HW94_BRADI (40S ribosomal protein S3a n=6 Tax=Pooideae TaxID=147368 RepID=I1HW94_BRADI) HSP 1 Score: 322 bits (824), Expect = 3.870e-105 Identity = 162/242 (66.94%), Postives = 191/242 (78.93%), Query Frame = 1
Query: 22 GRKGNKKKTVDPMTLKEWYDIKAPSTFQVRNPGKTLVTRTKGTKIASEGLKGRVFEFSLGDLNNDEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRISCIGFTKKQDNQIKQTCYAQASQIRAVRKKMCDIMTEAASKCDLRGLVLEFIPENISGAILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMERDEEVAEV 747
GRKG+KKK VDP T KEWYDIKAP F RN GKTLV+RT+GTKIASEGLK RVFE SL DL NDED YRKI+L EDVQG +VLTNF GMD T DKL SL+KKWQTLIEA VDV+TTD Y++R+ CIGFTK++ NQ+K+TCYAQ+SQIR +R+KM +IM A+ CDL+ LV +FIPE I I KA SI+P+QNVY+RKVK LK PKFDL KLME+HGD EDVG++++R E E
Sbjct: 12 GRKGSKKKIVDPFTKKEWYDIKAPLLFNTRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMIRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMVEIMINQAASCDLKELVAKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYGKEDVGVKLDRPAEGDEA 253
BLAST of mRNA_P-fluviatile_contig13.1686.1 vs. uniprot
Match: A0A812NHF5_SYMMI (40S ribosomal protein S3a n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NHF5_SYMMI) HSP 1 Score: 321 bits (823), Expect = 4.940e-105 Identity = 172/250 (68.80%), Postives = 197/250 (78.80%), Query Frame = 1
Query: 22 GRKGNKKKTVDPMTLKEWYDIKAPSTFQVRNPGKTLVTRTKGTKIASEGLKGRVFEFSLGDLNN-DEDLGYRKIKLCCEDVQGTSVLTNFHGMDLTRDKLCSLIKKWQTLIEAQVDVRTTDGYLLRISCIGFTKKQDNQ-IKQTCYAQASQIRAVRKKMCDIMTEAASKCDLRGLVLEF--IPENISGAILKAVQSIYPMQNVYIRKVKALKKPKFDLTKLMEMHGDNTTEDVGMEMERDEEVAEVAEEA 759
GRKG KKKTVDP + KE Y +KAPS F RN G+T++T+T GTKIASEGLKGRVFE SL DLN DE GYRKIKL CEDV G VLTNFHGMD+TRDKLCSLI+KWQTLIEA VDVRTTDGY+LR+ CIGFTKKQ NQ K TCYAQ+ Q+RA+R+KM DIMTE ASKCDL+ LV +F +PE+I I KA QSI+P+QNV IRKVK L+KPKFDL KLME+HGD+ ED G + D+ AE EA
Sbjct: 8 GRKGGKKKTVDPFSRKETYQVKAPSIFATRNAGRTIITKTIGTKIASEGLKGRVFEVSLADLNGGDESQGYRKIKLVCEDVNGYEVLTNFHGMDITRDKLCSLIRKWQTLIEAFVDVRTTDGYVLRMFCIGFTKKQGNQQAKSTCYAQSGQVRAIRRKMFDIMTEEASKCDLKELVQKFCSMPESIGHEIEKACQSIFPLQNVCIRKVKVLRKPKFDLVKLMELHGDSG-EDTGAAL--DKVAAETTVEA 254 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1686.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1686.1 >prot_P-fluviatile_contig13.1686.1 ID=prot_P-fluviatile_contig13.1686.1|Name=mRNA_P-fluviatile_contig13.1686.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=235bp MTLKEWYDIKAPSTFQVRNPGKTLVTRTKGTKIASEGLKGRVFEFSLGDLback to top mRNA from alignment at P-fluviatile_contig13:702418..709678- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1686.1 ID=mRNA_P-fluviatile_contig13.1686.1|Name=mRNA_P-fluviatile_contig13.1686.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7261bp|location=Sequence derived from alignment at P-fluviatile_contig13:702418..709678- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:702418..709678- >mRNA_P-fluviatile_contig13.1686.1 ID=mRNA_P-fluviatile_contig13.1686.1|Name=mRNA_P-fluviatile_contig13.1686.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1410bp|location=Sequence derived from alignment at P-fluviatile_contig13:702418..709678- (Porterinema fluviatile SAG_2381)back to top |