mRNA_P-fluviatile_contig13.1683.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1683.1
Unique NamemRNA_P-fluviatile_contig13.1683.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig13.1683.1 vs. uniprot
Match: D7FKH4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH4_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 1.610e-26
Identity = 53/68 (77.94%), Postives = 60/68 (88.24%), Query Frame = 1 
Query:    1 MNRFVFLGAPGVGKGSFASILAPRLGLAAVGVGELVRDEIKRGTASGNTLKAFSDNGLLAPDEVINNL 204
            MNRFVFLGAPGVGKGSFASIL P+LGLA +G G+LVR+E+KRGTA G  +KAFSD G LAPDEV+NNL
Sbjct:    1 MNRFVFLGAPGVGKGSFASILGPQLGLATIGAGDLVREEVKRGTAVGKEIKAFSDKGQLAPDEVVNNL 68
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BLAST of mRNA_P-fluviatile_contig13.1683.1 vs. uniprot
Match: A0A7S3GKI5_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GKI5_9EUKA)

HSP 1 Score: 73.9 bits (180), Expect = 4.180e-12
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 1 
Query:    4 NRFVFLGAPGVGKGSFASILAPRLGLAAVGVGELVRDEIKRGTASGNTLKAFSDNGLLAPDEVINNL 204
             + +F+GAPGVGKG+FAS LAP LG+  +  G+LVR EI   T  G T+K ++D G L PDE+I +L
Sbjct:   19 KKLIFMGAPGVGKGTFASRLAPVLGVPHISTGDLVRAEISNDTDIGKTIKDYNDKGQLVPDEIIVDL 85
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BLAST of mRNA_P-fluviatile_contig13.1683.1 vs. uniprot
Match: A0A835Z7J3_9STRA (Adenylate kinase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7J3_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.060e-12
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 1 
Query:    1 MNRFVFLGAPGVGKGSFASILAPRLGLAAVGVGELVRDEIKRGTASGNTLKAFSDNGLLAPDEVINNLASD 213
            + RFVFLGAPGVGKG+FA I+AP+LG+  +GVG+L+R  I   +A G   +     G L PDE I  L  +
Sbjct:    4 LRRFVFLGAPGVGKGTFADIIAPKLGIPLIGVGDLIRATIGTDSALGREFRRHVQQGHLVPDEFIMELVEE 74
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BLAST of mRNA_P-fluviatile_contig13.1683.1 vs. uniprot
Match: A0A3R7AZ26_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AZ26_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 6.590e-12
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 1 
Query:    7 RFVFLGAPGVGKGSFASILAPRLGLAAVGVGELVRDEIKRGTASGNTLKAFSDNGLLAPDEVI 195
            R +FLG PGVGKG++AS +AP+L +  +  G+LVR EIKR +A G  +K FS  G L PD++I
Sbjct:   35 RMMFLGPPGVGKGTYASRIAPKLDIPTISTGDLVRAEIKRDSALGKQIKEFSSTGKLVPDDII 97
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BLAST of mRNA_P-fluviatile_contig13.1683.1 vs. uniprot
Match: A0A7C1X7K1_9CREN (Adenylate kinase n=2 Tax=Thermofilum sp. TaxID=1961369 RepID=A0A7C1X7K1_9CREN)

HSP 1 Score: 72.8 bits (177), Expect = 7.610e-12
Identity = 31/69 (44.93%), Postives = 47/69 (68.12%), Query Frame = 1 
Query:    7 RFVFLGAPGVGKGSFASILAPRLGLAAVGVGELVRDEIKRGTASGNTLKAFSDNGLLAPDEVINNLASD 213
            R VF+G PGVGKG++A+ ++ R G+  V  G+++RDEIKRG+  G  LK + + G L PDEV+  +  +
Sbjct:    2 RLVFIGPPGVGKGTYAAAVSQRFGIPHVSTGDIIRDEIKRGSELGRKLKEYVEKGALVPDEVVTEMVRE 70
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BLAST of mRNA_P-fluviatile_contig13.1683.1 vs. uniprot
Match: A0A832GZ60_9CREN (Adenylate kinase n=1 Tax=Thermofilum sp. TaxID=1961369 RepID=A0A832GZ60_9CREN)

HSP 1 Score: 72.4 bits (176), Expect = 1.030e-11
Identity = 29/69 (42.03%), Postives = 48/69 (69.57%), Query Frame = 1 
Query:    7 RFVFLGAPGVGKGSFASILAPRLGLAAVGVGELVRDEIKRGTASGNTLKAFSDNGLLAPDEVINNLASD 213
            R VF+GAPGVGKG++A+  + R G+  +  G+++R+EI+RG+  G  LK + + GLL PDE++  +  +
Sbjct:    2 RLVFIGAPGVGKGTYAAAASQRFGIPHISTGDMIREEIRRGSELGRRLKEYVERGLLVPDEIVTEMVRE 70
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BLAST of mRNA_P-fluviatile_contig13.1683.1 vs. uniprot
Match: A0A497T4P7_9ARCH (Adenylate kinase n=1 Tax=Candidatus Aenigmarchaeota archaeon TaxID=2093792 RepID=A0A497T4P7_9ARCH)

HSP 1 Score: 72.4 bits (176), Expect = 1.100e-11
Identity = 32/63 (50.79%), Postives = 48/63 (76.19%), Query Frame = 1 
Query:    7 RFVFLGAPGVGKGSFASILAPRLGLAAVGVGELVRDEIKRGTASGNTLKAFSDNGLLAPDEVI 195
            RFVFLG PGVGKG++AS +AP LG+A +  G++ R+EIK+ T  G  +K++ ++G L PDE++
Sbjct:    2 RFVFLGPPGVGKGTYASRVAPILGIAHISTGDIFREEIKKETELGKKVKSYLESGQLVPDEIV 64
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BLAST of mRNA_P-fluviatile_contig13.1683.1 vs. uniprot
Match: A0A485KF55_9STRA (Aste57867_5851 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KF55_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.330e-11
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 1 
Query:    7 RFVFLGAPGVGKGSFASILAPRLGLAAVGVGELVRDEIKRGTASGNTLKAFSDNGLLAPDEVI 195
            R +FLG PGVGKG++A+ LAP+L +  +  G+LVR EIKR +A G  +K FS +G L PDE+I
Sbjct:   10 RMMFLGPPGVGKGTYATRLAPKLNIPTISTGDLVRAEIKRDSALGKQIKEFSASGKLVPDEII 72
[Close]
BLAST of mRNA_P-fluviatile_contig13.1683.1 vs. uniprot
Match: A0A397B5Q4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B5Q4_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.670e-11
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 1 
Query:    7 RFVFLGAPGVGKGSFASILAPRLGLAAVGVGELVRDEIKRGTASGNTLKAFSDNGLLAPDEVI 195
            R +FLG PGVGKG++AS +AP+L +  +  G+LVR EIKR +A G  +K FS  G L PD++I
Sbjct:   35 RMMFLGPPGVGKGTYASRIAPKLDIPTISTGDLVRAEIKRDSALGKQIKEFSSTGKLVPDDII 97
[Close]
BLAST of mRNA_P-fluviatile_contig13.1683.1 vs. uniprot
Match: A0A6G0XA60_9STRA (ADK_lid domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XA60_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.170e-11
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 1 
Query:    7 RFVFLGAPGVGKGSFASILAPRLGLAAVGVGELVRDEIKRGTASGNTLKAFSDNGLLAPDEVI 195
            R +FLG PGVGKG++A+ +AP+L +  +  G+LVR EIKR +A G  +K FS  G L PDE+I
Sbjct:   24 RMMFLGPPGVGKGTYATRIAPKLNIPTISTGDLVRAEIKRDSALGKQIKEFSSTGKLVPDEII 86
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKH4_ECTSI1.610e-2677.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3GKI5_9EUKA4.180e-1252.24Hypothetical protein n=2 Tax=Palpitomonas bilix Ta... [more]
A0A835Z7J3_9STRA6.060e-1249.30Adenylate kinase-domain-containing protein n=1 Tax... [more]
A0A3R7AZ26_9STRA6.590e-1252.38Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A7C1X7K1_9CREN7.610e-1244.93Adenylate kinase n=2 Tax=Thermofilum sp. TaxID=196... [more]
A0A832GZ60_9CREN1.030e-1142.03Adenylate kinase n=1 Tax=Thermofilum sp. TaxID=196... [more]
A0A497T4P7_9ARCH1.100e-1150.79Adenylate kinase n=1 Tax=Candidatus Aenigmarchaeot... [more]
A0A485KF55_9STRA1.330e-1153.97Aste57867_5851 protein n=1 Tax=Aphanomyces stellat... [more]
A0A397B5Q4_9STRA1.670e-1152.38Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6G0XA60_9STRA2.170e-1152.38ADK_lid domain-containing protein n=1 Tax=Aphanomy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:684982..686507 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score111.3
Seed ortholog evalue1.9e-22
Seed eggNOG ortholog2880.D7FKH4
KEGG rclassRC00002,RC00078
KEGG koko:K00858,ko:K00939,ko:K00944
KEGG ReactionR00104,R00127,R00157,R00333,R01547,R11319
KEGG Pathwayko00230,ko00730,ko00760,ko01100,ko01110,ko01130,map00230,map00730,map00760,map01100,map01110,map01130
KEGG ModuleM00049
EggNOG free text desc.adenylate kinase activity
EggNOG OGsCOG0563@1,KOG3078@2759
EC2.7.1.23,2.7.4.10,2.7.4.3
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Exons3
Model size750
Cds size216
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1683.1prot_P-fluviatile_contig13.1683.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 684982..685973 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815546.0962014-CDS-P-fluviatile_contig13:684981..6850561622815546.0962014-CDS-P-fluviatile_contig13:684981..685056Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 684982..685056 +
1693562213.441747-CDS-P-fluviatile_contig13:684981..6850561693562213.441747-CDS-P-fluviatile_contig13:684981..685056Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 684982..685056 +
1622815546.106835-CDS-P-fluviatile_contig13:685176..6852541622815546.106835-CDS-P-fluviatile_contig13:685176..685254Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 685177..685254 +
1693562213.4533238-CDS-P-fluviatile_contig13:685176..6852541693562213.4533238-CDS-P-fluviatile_contig13:685176..685254Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 685177..685254 +
1622815546.1164358-CDS-P-fluviatile_contig13:685910..6859731622815546.1164358-CDS-P-fluviatile_contig13:685910..685973Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 685911..685973 +
1693562213.4626803-CDS-P-fluviatile_contig13:685910..6859731693562213.4626803-CDS-P-fluviatile_contig13:685910..685973Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 685911..685973 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815546.1263938-UTR-P-fluviatile_contig13:685973..6865071622815546.1263938-UTR-P-fluviatile_contig13:685973..686507Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 685974..686507 +
1693562213.4718513-UTR-P-fluviatile_contig13:685973..6865071693562213.4718513-UTR-P-fluviatile_contig13:685973..686507Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 685974..686507 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1683.1

>prot_P-fluviatile_contig13.1683.1 ID=prot_P-fluviatile_contig13.1683.1|Name=mRNA_P-fluviatile_contig13.1683.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=72bp
MNRFVFLGAPGVGKGSFASILAPRLGLAAVGVGELVRDEIKRGTASGNTL
KAFSDNGLLAPDEVINNLASD*
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mRNA from alignment at P-fluviatile_contig13:684982..686507+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1683.1 ID=mRNA_P-fluviatile_contig13.1683.1|Name=mRNA_P-fluviatile_contig13.1683.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1526bp|location=Sequence derived from alignment at P-fluviatile_contig13:684982..686507+ (Porterinema fluviatile SAG_2381)
ATGAATCGTTTCGTCTTCCTCGGAGCTCCAGGCGTCGGCAAGGGCTCATT
CGCATCGATCTTGGCGCCCCGACTGGTAGGAGGGTGGGCATGAGGAACGG
AATGGGAAGGGTAGACTAGCGCTCTCTCTCTCGGTCACACACACACACGC
GATCTGTAGCTCAGCAGACGCCTTCATCGTTTCGCTCCCTATCAGGGGCT
GGCTGCTGTTGGAGTGGGAGAATTGGTGAGAGATGAAATCAAAAGAGGGA
CAGCATCGGGAAATACTCTGAAGGTGAGAACCGTCGCTATCTGTTCACTC
GCCCCTCCCCTTTCGCCAAAACCACAGGGCTCTGGCTTGTGAAACGACAA
CCATTGGTCACTACAACGCGGTCTAAGTCAGCATCACATCACAGTACCGA
CATCAGCCACGCACCTATCTCTCAGTGTGGACTCCGAACTTTTGTTCCGA
GGCGCGTGCGGTAGCTCGGTCAGCTTGTACGGATGAGCGCCCGGGTTCAG
AGCTCGCCCATCGCAGGTCCAATCCCCATGTTGCATCAATAAAACACACA
CTGACACATCGGGCAGAAAACTCGGCCGGTTGTTCTGTGCGAATCGCGCG
GCCGTAGCTAACTCGTGCGCCTTTCTCGCACCTCCGATGCTTGTATCCGG
TGGCACTGACATGATCCCGGTGCACTGCTGTCAGGCGAGGACGGCTCGCT
CATTTCCTCGATAGCCTGTGGAGCCGTGTAAAGTTGTTCGGAGCTTCACG
ACTAGACTCGCGTCATTCGATTTTTTTAGAAGCGGGAAGTAGAGTCAATC
ACAAACGTCGCGGTACTGCTCGATGAAGGCACCTGTTTCGATTTTGCGTT
GGGAACGTCAACCAGACTCTCATGTACGACCCTCATCCTGGCGATTGATC
TTTGCGTTCGTTGCCCGGTGATCCTGAAGGCGTTCTCCGACAACGGCCTG
CTCGCCCCGGATGAGGTCATCAACAACTTGGCAAGTGATTAATACTGCGG
CCATGCTTGCGCCGTACAATAGCCGCACGTTGCAGAATATCACATGGACC
AGAGATGGGTGGTGGCCTGCCAGCTGCCAACCGGCTTCGGTGTAGTTTGG
TGTTCGCATGGGCATCGGAGGACCCTCCGCAGGAAACATTTCCTCTCGAA
AATGCCGTTGTAGAGGGTAGAATGGGGTGGATATTCGTGGTTTTTGACTT
TCAACGGTCGTTCTTGAGACGCCACCCGTTTCCTCAGAGATTGCACGCAA
ATCTTTTGCGATAACTCTGCTGACACCGCTGTAGATTTCTGATGCCGGAG
AAGAATGAGGGCCCTTTGTCTCAAGTCGAAAGCAGAGGTGCGCAGAGCGC
GGACCAAGAGATTGAAATGCAGGATTAAACTTCTTCCGTTTCTTGTTTCA
CAGTGTATGCCTTTTCCCGCCGCCTGAGGTTCAGTCTCCGGTGGTGACAA
CATCCCCTACGCTTCTGGGCTATCGCACGCTACCTTGCGAAAAAATGATT
ACTCACCTCGATCAGGTGAAGCGACG
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:684982..686507+

>mRNA_P-fluviatile_contig13.1683.1 ID=mRNA_P-fluviatile_contig13.1683.1|Name=mRNA_P-fluviatile_contig13.1683.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=432bp|location=Sequence derived from alignment at P-fluviatile_contig13:684982..686507+ (Porterinema fluviatile SAG_2381)
ATGAATCGTTTCGTCTTCCTCGGAGCTCCAGGCGTCGGCAAGGGCTCATT
CGCATCGATCTTGGCGCCCCGACTGATGAATCGTTTCGTCTTCCTCGGAG
CTCCAGGCGTCGGCAAGGGCTCATTCGCATCGATCTTGGCGCCCCGACTG
GGGCTGGCTGCTGTTGGAGTGGGAGAATTGGTGAGAGATGAAATCAAAAG
AGGGACAGCATCGGGAAATACTCTGAAGGGGCTGGCTGCTGTTGGAGTGG
GAGAATTGGTGAGAGATGAAATCAAAAGAGGGACAGCATCGGGAAATACT
CTGAAGGCGTTCTCCGACAACGGCCTGCTCGCCCCGGATGAGGTCATCAA
CAACTTGGCAAGTGATTAAGCGTTCTCCGACAACGGCCTGCTCGCCCCGG
ATGAGGTCATCAACAACTTGGCAAGTGATTAA
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