mRNA_P-fluviatile_contig13.1667.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1667.1 vs. uniprot
Match: D7FKE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE9_ECTSI) HSP 1 Score: 296 bits (757), Expect = 2.230e-83 Identity = 231/393 (58.78%), Postives = 247/393 (62.85%), Query Frame = 1
Query: 400 EATCDVECAMKVEEIRMLSKKRKQSQRAGGSNGAFAMK-GAADGDKVAKRPLHNRNSHETGSHSATGGSSQTLMHHDSNLVGMPPAPPGLSKAXXXXXXXXGNSRD---------------SKDSA-RRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVADGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKGNGXXXXXXXXXXXXXXAGNGPKYSSYXXXXXXR--DAEPAGCASSCDCNNISSRSGG-GVGGGDSKGCSSGLAAREGCWKAFSEGS--GVGPTVGGDVEADRKARGLHAGGGVAG--TKDVGEALQQRLQQHGAPAPEEAVNSALLLSHLELLAKGIDLQVKFHNHLRDVVESQQQLQAQLAEQRGK 1506
EATCDVECAMKVEEIR++SKKRKQSQR GG NGA A + GA K AKRPL N N G+ SA G XXXXXXXX SK +A RRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPV DGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGK GXXXXXXXXXXXXXX R DAE C SSCDC + S SGG G+GGG S+ LA +G +A S G GD A G A +AG T+ VG A QRLQ G A E VN ALLLSHLELLAKGID+QVKFHNHLR+VVESQQQLQAQL Q+G+
Sbjct: 4 EATCDVECAMKVEEIRIMSKKRKQSQRVGGGNGALASEEGANISAKAAKRPLSNSNGCGAGTQSAKSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKHAASRRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKSLGXXXXXXXXXXXXXXXXXXXXXDDVKDFSPGRGRDAETPECGSSCDCVDTSKLSGGSGIGGG-----SNSLAETDGRGEAARSKSTTGFAQAASGDEGAKGSGGGAKASAQLAGGGTEAVGGA--QRLQLPGEAAAGEVVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQGR 389
BLAST of mRNA_P-fluviatile_contig13.1667.1 vs. uniprot
Match: A0A6H5KUD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUD1_9PHAE) HSP 1 Score: 198 bits (503), Expect = 3.520e-49 Identity = 172/374 (45.99%), Postives = 188/374 (50.27%), Query Frame = 1
Query: 400 EATCDVECAMKVEEIRMLSKKRKQSQRAGGSNGAFAMKGAADGDKVAKRPLHNRNSHETGSHSATGGSSQTLMHHDSNLVGMPPAPPGLSKAXXXXXXXXGNSRDSKDSARRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVADGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKGNGXXXXXXXXXXXXXXAGNGPKYSSYXXXXXXRDAEPAGCASSCDCNNISSRSGG-GVGGGDSKGC---SSGLAAREGCWKAFSEGSGVGPTVGGDVEADRKARGLHAGGGVAG--TKDVGEALQQRLQQHGAPAPEEAVNSALLLSHLELLAKGIDLQVKFHNHLRDVVESQQQLQAQLAEQRG 1503
EATCDVECAMKVEEIR++SKKRKQSQR G + + XXXXXXXX +ARRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPV DGLTSEHIKSHLQK R L D G+G RDAE GC SSCDC + S+ SGG GV SG AAR F++ T D A+ G A +AG T+ VG A QRLQ G A E VN ALLLSHLELLAKGID+QVKFHNHLR+VVESQQQLQAQL Q+G
Sbjct: 15 EATCDVECAMKVEEIRIMSKKRKQSQRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSPADQLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKPRX--AAXXXXXXXXXXDLKDFSPGRG--------------------------------RDAETPGCGSSCDCVDTSNLSGGSGVXXXXXXXXXXXGSGEAARSKSTTGFAQ------TANRDEGAEGSGGGAKASAQLAGGGTEAVGGA--QRLQLPGEAAGE-VVNGALLLSHLELLAKGIDMQVKFHNHLREVVESQQQLQAQLVRQQG 345
BLAST of mRNA_P-fluviatile_contig13.1667.1 vs. uniprot
Match: A0A6S6I5N2_9STRA (Phosphorus starvation response 1 n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A6S6I5N2_9STRA) HSP 1 Score: 105 bits (262), Expect = 6.210e-20 Identity = 50/77 (64.94%), Postives = 62/77 (80.52%), Query Frame = 1
Query: 703 NSRDSKDSARRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVADGLTSEHIKSHLQKYRLHRQRSREEFLKSY 933
+S ++ AR+RFVW LH+DFVAA+FDVGLKCASPK +LEMM LT +HIKSHLQKYRLHR+R+REEFL+ +
Sbjct: 67 SSINNNSKARKRFVWPDDLHRDFVAAIFDVGLKCASPKTILEMMNNTKDLTPDHIKSHLQKYRLHRERAREEFLQHF 143
BLAST of mRNA_P-fluviatile_contig13.1667.1 vs. uniprot
Match: A0A835YR85_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR85_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 9.110e-20 Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 1
Query: 736 RFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVADGLTSEHIKSHLQKYRLHRQRSREEFLKSY 933
RFVW LH FV A+FDVGLK ASP++LL+MMP GLT+EH+KSHLQK+RLHR +SREEFL +
Sbjct: 1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDPQGLTTEHVKSHLQKFRLHRDKSREEFLTKH 66
BLAST of mRNA_P-fluviatile_contig13.1667.1 vs. uniprot
Match: W7U4E9_9STRA (Two-component response regulator arr12 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4E9_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.250e-19 Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 727 ARRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVADGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTDLDGGKGNG 972
A++RFVW LH+DFVAA+FDVGLKCASPK ++EMM LT +HIKSHLQKYRLHR+R+REEFL+ + + G G G
Sbjct: 54 AKKRFVWPDDLHRDFVAAIFDVGLKCASPKTIMEMMSNTKELTPDHIKSHLQKYRLHRERAREEFLQHFGKNPFVAGAAGTG 135
BLAST of mRNA_P-fluviatile_contig13.1667.1 vs. uniprot
Match: A0A7S3QDX4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QDX4_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.470e-16 Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 733 RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVADGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 936
RRF W LH+DFV+AVFDVGLK +SP LLE MP + +TSE IKSHLQKYRLHRQ+S++EF+ SY+
Sbjct: 158 RRFAWPDELHRDFVSAVFDVGLKHSSPSALLEQMPKHEDITSERIKSHLQKYRLHRQKSKKEFMSSYD 225
BLAST of mRNA_P-fluviatile_contig13.1667.1 vs. uniprot
Match: A0A7S3LD31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LD31_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 1.790e-16 Identity = 41/77 (53.25%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 706 SRDSKDSARRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVADGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 936
++D+ +RF W LH+DFVAA+FDVGLK +SP +LE MP + +TSE +KSHLQKYR+HR +S++EF+ SY+
Sbjct: 75 AKDTDPRWSKRFTWPDDLHRDFVAAIFDVGLKHSSPSTILEHMPKHEQITSERVKSHLQKYRIHRIKSKKEFMSSYD 151
BLAST of mRNA_P-fluviatile_contig13.1667.1 vs. uniprot
Match: A0A7S2YNK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YNK9_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 4.860e-15 Identity = 43/78 (55.13%), Postives = 58/78 (74.36%), Query Frame = 1
Query: 703 NSRDSKDSA-RRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVADGLTSEHIKSHLQKYRLHRQRSREEFLKSY 933
NS+ + D +RF W LH+DFV+A+FDVGLK +SP LLE MP + +T+E IKSHLQKYRLHR +S++EF+ +Y
Sbjct: 182 NSKSNNDGRWSKRFTWPEELHRDFVSAIFDVGLKHSSPSTLLEQMPKHEQITTERIKSHLQKYRLHRVKSKQEFMHTY 259
BLAST of mRNA_P-fluviatile_contig13.1667.1 vs. uniprot
Match: A0A6V0AEB9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6V0AEB9_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 5.120e-15 Identity = 46/95 (48.42%), Postives = 64/95 (67.37%), Query Frame = 1
Query: 703 NSRDSKDSAR--RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVADGLTSEHIKSHLQKYRLHRQRSREEFLKSY-----NYLTDLDGGKG 966
N + K+ R +RF W LH+DFV+A+FDVGLK ASP ++E MP + +T+E IKSHLQKYRLHR +S++EF+ SY N+ + + G G
Sbjct: 287 NKKSKKEDGRWSKRFTWPEDLHRDFVSAIFDVGLKHASPSSIMEHMPKHEQITTERIKSHLQKYRLHRVKSKKEFISSYEASLRNFQQNQNNGNG 381
BLAST of mRNA_P-fluviatile_contig13.1667.1 vs. uniprot
Match: A0A812UMV4_9DINO (MYBC1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812UMV4_9DINO) HSP 1 Score: 82.0 bits (201), Expect = 8.920e-15 Identity = 42/79 (53.16%), Postives = 54/79 (68.35%), Query Frame = 1
Query: 700 GNSRDSKDSARRRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMM-PVADGLTSEHIKSHLQKYRLHRQRSREEFLKSY 933
G S R+RF+W+ LH+ FVAA+FD GLK +PKLL E+M G+TS+HIKSHLQK+R + + SREEFL Y
Sbjct: 24 GQPASSAPKRRKRFLWTDDLHRMFVAAIFDHGLKACTPKLLFELMGDTPAGMTSDHIKSHLQKFRANSKISREEFLADY 102 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1667.1 >prot_P-fluviatile_contig13.1667.1 ID=prot_P-fluviatile_contig13.1667.1|Name=mRNA_P-fluviatile_contig13.1667.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=608bp MASSPCECRRYAYRKGCSQERQEATCDVECAMKVEEIRMLSKKRKQSQRAback to top mRNA from alignment at P-fluviatile_contig13:554363..558302- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1667.1 ID=mRNA_P-fluviatile_contig13.1667.1|Name=mRNA_P-fluviatile_contig13.1667.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3940bp|location=Sequence derived from alignment at P-fluviatile_contig13:554363..558302- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:554363..558302- >mRNA_P-fluviatile_contig13.1667.1 ID=mRNA_P-fluviatile_contig13.1667.1|Name=mRNA_P-fluviatile_contig13.1667.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3648bp|location=Sequence derived from alignment at P-fluviatile_contig13:554363..558302- (Porterinema fluviatile SAG_2381)back to top |