mRNA_P-fluviatile_contig13.1659.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1659.1 vs. uniprot
Match: D7FV50_ECTSI (PX domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV50_ECTSI) HSP 1 Score: 567 bits (1462), Expect = 3.010e-188 Identity = 418/731 (57.18%), Postives = 466/731 (63.75%), Query Frame = 2
Query: 92 PPRKARRGGMPLVQWVWPANSGSALARAGSEWFRGAGSSRESQQE-----------------NPKRLHGRTQKSSVVIGTVCEPVRPTRLDLGASQRLPTSSRVIYTAKGGHSNSAAAHPSASSAVPAAARPGTEW-GASARPPAIKLPQT-HPHE--TQWMDLGFDGDGFDGGDSGGGRTRAFSANSATAAGLSSPRYLQSTTVSQAKAVEPPGRS--RGEQQQRRSCRNSGGDXXXXXXXXXXXXXXASLGGAENETGXXXXXXXXXXXXXXXXXAVGDDGTTGAGR---KDGARWGTSSRSAR----NXXXXXXXXXXXXXXXKMGSKVFKRLRKSAAHTTEGKHSRYGSVKVAAPASGGGGCSGREV-------DELDQRPRVM-RRDEREILTMHTHGVLRPEGVRLRVVKASGRTLGEAKFHMEIRTQRPGQVWSVCRRHKDFQRLHQRLQERFPALVLPRLPRPPTGGG-IVIEPATLERARAGLQAYMAAIVGGVPAAWGVEEFVMFLDSDEKGRRLFSRKRKKESRRVVTETLPAPADEQQEXXXXXXXXXGRCDDXXXXXXXXXXXXXXXXXXXXESRAAARNAAFPPNLASPRAGLAGDGFQTKSLLDLKVEEKKRALAALEGEAANHFDGTGAVMNTAVSFSDDDDDEX--DFEEGNDFIDGEDAIRAMLDRDADEAEDDNLFSIPAGTDFGLPPDDDXXXGD-------DGFDLTYRG 2140
PPRK +RG MPL+QWVWPANSG LAR GSEWFRGAGS + N RL GRTQKSSVV+GTVC+PVRPTRLDL ASQ PTSSRVIYTAKGGH++S AH + ASARP A+KLP + HP + + W+D G F GG R+R +SA+S +AAGL SPRYLQSTTVSQAKAVEP G++ R EQ+QR S R++GG GG G AVG KD A WG S R+ R N K+GS VF RLR +T+G HSRYG+VKV AP+SG DE QR RV+ RRDERE++TMHT GVLRPEGV+LRVVKASGRTL + KFHMEIRT RPGQVWSVCRR+KDFQ LH LQ FPALVLPRLPRPPTGGG + +EPATLERARAGLQAY AA+VG VPAAWG+EE VMFLDS+EKGRRLFS XXXXXXXXX XXXXXXXXXXXXXXXXXXXX A + AAFPP+L SP+AG G GF KSLLDLKVEEKK ALAALEG AANHFDG GAVMN AVSFS+D DD+ +F E +DFIDGEDAIRAMLDRDADEAEDDNLFSIPAGTDFG+P DD XXX D FD+TY G
Sbjct: 83 PPRKGQRG-MPLMQWVWPANSG--LARVGSEWFRGAGSGADGXXXXXXXXXXXXXXXXXXXXNRVRLQGRTQKSSVVVGTVCQPVRPTRLDLTASQGYPTSSRVIYTAKGGHASSTHAHAKGDALTXXXXXXXXXXXSASARPSALKLPSSPHPADDASPWLDSL--GRSF-GGXXXXXRSRGYSAHSVSAAGLLSPRYLQSTTVSQAKAVEPSGKNHHRAEQKQRSSRRSNGGGQSDVGFGACGGGFG---GGMLESLGGFLGIGRGGDGTPWATGAVGGXXXXXXXXXXGKDAAGWGKSKRAGRSNAGNNHAARGSSIGPVGEGKIGSNVFSRLRN---RSTDGTHSRYGNVKVRAPSSGXXXXXXXXXXXXXXXEDEYAQRSRVLLRRDEREVVTMHTPGVLRPEGVKLRVVKASGRTLEDTKFHMEIRTLRPGQVWSVCRRYKDFQSLHSCLQATFPALVLPRLPRPPTGGGGMALEPATLERARAGLQAYAAAVVGSVPAAWGLEELVMFLDSEEKGRRLFS----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKPVARKAAAFPPDLVSPKAGTPGVGFGQKSLLDLKVEEKKLALAALEGAAANHFDGVGAVMNAAVSFSEDSDDDASQEFGEESDFIDGEDAIRAMLDRDADEAEDDNLFSIPAGTDFGIPLDDXXXXXXXXQDCSADAFDITYHG 791
BLAST of mRNA_P-fluviatile_contig13.1659.1 vs. uniprot
Match: A0A6H5JIG0_9PHAE (PX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG0_9PHAE) HSP 1 Score: 347 bits (891), Expect = 1.290e-109 Identity = 237/331 (71.60%), Postives = 253/331 (76.44%), Query Frame = 2
Query: 1172 MHTHGVLRPEGVRLRVVKASGRTLGEAKFHMEIRTQRPGQVWSVCRRHKDFQRLHQRLQERFPALVLPRLPRPPTGGG-IVIEPATLERARAGLQAYMAAIVGGVPAAWGVEEFVMFLDSDEKGRRLFSRKRKKESRRVVTETLPAPADEQQEXXXXXXXXXGRCDDXXXXXXXXXXXXXXXXXXXXESRAAARNAAFPPNLASPRAGLAGDGFQTKSLLDLKVEEKKRALAALEGEAANHFDGTGAVMNTAVSFSDDDDD--EXDFEEGNDFIDGEDAIRAMLDRDADEAEDDNLFSIPAGTDFGLPPDDDXXXGD-----DGFDLTYRG 2140
MHT GVLRPEGV+LRVVKASGRTL + KFHMEIRT RPGQVWSVCRR+KDFQ LH LQ FPALVLPRLPRPPTGGG + +EPATLERARAGLQAY AA+VG VPAAWG+EE VMFLDS+EKGRRLFS XXXXXXXXX XXXXXXXXXXXXXXXXXXXX A + AAFPP+L SP+ G G GF KSLLDLKVEEKK ALAALEG AANHFDG GAVMN AVSFS+D DD +F E +DFIDGEDAIRAMLDRDADEAEDDNLFSIPAGTDFG+P DD XXX D FD+TY G
Sbjct: 1 MHTPGVLRPEGVKLRVVKASGRTLEDTKFHMEIRTLRPGQVWSVCRRYKDFQSLHSCLQATFPALVLPRLPRPPTGGGGMALEPATLERARAGLQAYAAAVVGSVPAAWGLEELVMFLDSEEKGRRLFS---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKPVARKGAAFPPDLVSPKTGTPGVGFGQKSLLDLKVEEKKLALAALEGAAANHFDGVGAVMNAAVSFSEDSDDGASQEFGEESDFIDGEDAIRAMLDRDADEAEDDNLFSIPAGTDFGIPLDDXXXXXXQDCSADAFDITYHG 322
BLAST of mRNA_P-fluviatile_contig13.1659.1 vs. uniprot
Match: A0A6H5JHE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHE1_9PHAE) HSP 1 Score: 107 bits (268), Expect = 1.370e-21 Identity = 149/326 (45.71%), Postives = 175/326 (53.68%), Query Frame = 2
Query: 335 PTSSRVIYTAKGGHSNSAAAHP------SASSAVPAAARPGTEWGASARPPAIKLPQT-HPHE--TQWMD-LG--FDGDGFDGGDSGGGRTRAFSANSATAAGLSSPRYLQSTTVSQAKAVEPPGRS--RGEQQQRRSCRNSGGDXXXXXXXXXXXXXXASLGGA--ENETGXXXXXXXXXXXXXXXXXAV--------GDDGTTGA------------GRKDGARWGTSSRSAR----NXXXXXXXXXXXXXXXKMGSKVFKRLRKSAAHTTEGKHSRYGSVKVAAPASGGGGCSGREV-----DELDQRPR-VMRRDEREILTM 1174
PTSSRVIYTAKGGH++S AH S +AV AAA+ ASARP A+KLP + HP + W+D LG F G G R+R SA+S +AAGL SPRYLQSTTVSQAKAVEP G++ R EQ+ R XXXXXXXXXXXXXX E++ G XXXXXXXXXXXXX G TGA KD A WG S R+ R N K+GS VF RLR +T+G HSRYG+VKV AP+SG DE QR R V+RRDERE++ +
Sbjct: 13 PTSSRVIYTAKGGHASSTHAHAKGDTLTSTMAAVAAAAK-----SASARPSALKLPSSPHPADDAAPWLDSLGRSFGGVGGXXXXXXXXRSRGCSAHSTSAAGLLSPRYLQSTTVSQAKAVEPSGKNHHRAEQKHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDVGFGACXXXXXXXXXXXXXXXXXXXXXXGGTPWATGAVGGXXXXXXXXXXXKDAAGWGKSKRAGRSSAGNNHAARGSSIGPVGEGKIGSNVFSRLRN---RSTDGTHSRYGNVKVRAPSSGXXXXXXXXXXXXXEDECAQRARAVLRRDEREVVAI 330
BLAST of mRNA_P-fluviatile_contig13.1659.1 vs. uniprot
Match: A0A6H5JKM9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKM9_9PHAE) HSP 1 Score: 100 bits (249), Expect = 1.120e-20 Identity = 59/97 (60.82%), Postives = 64/97 (65.98%), Query Frame = 2
Query: 92 PPRKARRGGMPLVQWVWPANSGSALARAGSEWFRGAG---------SSRESQQ---------ENPKRLHGRTQKSSVVIGTVCEPVRPTRLDLGASQ 328
PP K +RG MPL+QWVWPANSG LAR GSEWFRG G +E Q EN RL GRTQKSSVV+GTVC+PVRPTRLDL ASQ
Sbjct: 80 PPCKGQRG-MPLMQWVWPANSG--LARVGSEWFRGTGLGADGGEIRDGKEQQXXXXXXXXXXENRVRLQGRTQKSSVVVGTVCQPVRPTRLDLTASQ 173 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1659.1 >prot_P-fluviatile_contig13.1659.1 ID=prot_P-fluviatile_contig13.1659.1|Name=mRNA_P-fluviatile_contig13.1659.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=675bp MPLVQWVWPANSGSALARAGSEWFRGAGSSRESQQENPKRLHGRTQKSSVback to top mRNA from alignment at P-fluviatile_contig13:488219..498197- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1659.1 ID=mRNA_P-fluviatile_contig13.1659.1|Name=mRNA_P-fluviatile_contig13.1659.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9979bp|location=Sequence derived from alignment at P-fluviatile_contig13:488219..498197- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:488219..498197- >mRNA_P-fluviatile_contig13.1659.1 ID=mRNA_P-fluviatile_contig13.1659.1|Name=mRNA_P-fluviatile_contig13.1659.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4050bp|location=Sequence derived from alignment at P-fluviatile_contig13:488219..498197- (Porterinema fluviatile SAG_2381)back to top |