mRNA_P-fluviatile_contig13.1647.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig13.1647.1
Unique NamemRNA_P-fluviatile_contig13.1647.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: D8LTZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTZ9_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 3.260e-146
Identity = 241/409 (58.92%), Postives = 285/409 (69.68%), Query Frame = 1
Query:    1 LRRGTKVYVEARLGSLLVQRLSPVSVDPLTGDFSYDGATDNIAVFNNNTLEEIYGETLHVVLRSWDPTSSWVDSAQILIAVRSISIYPTVGMVDEDMYAAGNLRDGGGQEFVVFRLEPVEAGSDFRTEQEDVPNLVLSASLRSPFRSPVQSVARLLQGCASTADVAFDTVSQQTERLAPYLSRRAARVPKIPAGLLVLASLPLVGVLXXXXXXXXXXXXXXXXXXGGVGALLTAAVWGFSRGGRSWVQGWFNPC---------------------TRGSAEKIQSGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAWSCKPPHEVAWIKTGSSLGSTPGGRKQGDVYDSKENVGASGVRYPSNPDG 1164
            L+ GTKVYVE RLG L VQRLSPVSVDP+TGDFSY+ AT NI VFN+N LEEI+ ETLH+VLRSW PTS+WVDSA+ILI+VRSISI  TV     DM   G+      ++F+VFRLEPV  G  F+T  E VPNLVLSA+LRSPFR PV+SVARLLQGCAST D+A DTVS QTER+APYL+ +AA VP IPAG++VLASLPL+ VL                  GGVGALLTAAVW FSRGGR+WVQ    P                       R +   + +GMW KLA+S+ VD IGC+SY+VP+LGESAD++WAP+SYLLIDAMYH SSPWAG  GA+EELLPFTDIIPTATLAW  +   ++        L +    R++  VY S +NVG  GV +PS PDG
Sbjct:   25 LKWGTKVYVEVRLGDLHVQRLSPVSVDPVTGDFSYESATGNITVFNSNILEEIFDETLHIVLRSWHPTSNWVDSAKILISVRSISIDSTVRPTGVDM---GDESGEADRDFMVFRLEPVPGGDSFQTADESVPNLVLSATLRSPFRPPVESVARLLQGCASTVDLALDTVSLQTERVAPYLTSQAALVPTIPAGIVVLASLPLLCVLGVAGLPLLVPMLIVVAAVGGVGALLTAAVWLFSRGGRAWVQRAVRPVYDRVGRDNPEVLYPVGPGPSPARIAQCLVPTGMWSKLAMSIAVDTIGCTSYIVPILGESADLLWAPVSYLLIDAMYHGSSPWAGVFGAMEELLPFTDIIPTATLAWMKEYLPQML-----QGLSAADQNRQEQHVYHSDDNVGPGGVHFPSQPDG 425          
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: W7TYL2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYL2_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.640e-22
Identity = 91/327 (27.83%), Postives = 139/327 (42.51%), Query Frame = 1
Query:  109 GATDNIAVFNNNTLEEIYGETLHVVLRSWDPTSSWVDSAQILIAVRSISIYPTVGMVDEDMYAAGNLRDGGGQEF-VVFRLEPVEAGSDFRTEQEDVPNLVLSASLRSPFRSPVQSVARLLQGCASTADVAFDTVSQQTERLAPYLSRRAARVPKIPAGLLVLASLPLVGVLXXXXXXXXXXXXXXXXXXGGVGALLTAAVWGFSRGGRSWVQGWFNPCTR-----GSAEKI------------------QSGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAW 1017
            GA     VF    LE++Y E L   L + +   S +   Q  + V+ + I                     G++F   F L P         E    P + LS  L  P R   + ++ ++    ST D   D  +       PY++ +      +P G+L+LA+ P +GV                   G    + +  +   SR GR  V+   +P  R      + +++                    G W +L  S+ +D IG SSY++PVLGE  D+ WAP+  + + AMY ++SP+A  +G +EELLPFTDIIPTATLAW
Sbjct:  137 GARPEAVVFTQKKLEDLYKENLKFKLINKE---SKMVLGQSQLPVKKLMI---------------------GKKFEAFFNLAPPPVAGKRAAEVHAGPAIRLSVELMGPLRKEFRFLSDVVSKYYSTVDRTLDGAAAAGHAAQPYVANKWTLPLLVPFGVLLLAASPFMGVALTIGLPVFLPLLLLGLVAGLTMLIASIILALSSRAGRGRVEALVDPVIRKLTHTATGQQLLYETGPRPSPLRIAKTFAPKGRWERLVTSLILDTIGASSYLLPVLGEFTDLAWAPLFAVALHAMYSETSPYAHYVGLVEELLPFTDIIPTATLAW 439          
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: A0A836CGD0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGD0_9STRA)

HSP 1 Score: 108 bits (270), Expect = 8.620e-22
Identity = 85/279 (30.47%), Postives = 117/279 (41.94%), Query Frame = 1
Query:  340 FRLEPVEAGSDFRTEQEDVPNLVLSASLRSPFRSPVQSVARLLQGCASTADVAFDTVSQQTERLAPYLSRRAARVPKIPAGLLVLASLPLVGVLXXXXXXXXXXXXXXXXXXGGVGALLTAAVWGFSRGGR-------------------------SWVQGWFNPCTRGSAEKIQSGM---------------------------WGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAWS 1020
             ++ P E+G+           L     L    R  V ++ + L    + ADVA D V+Q  E+  P+++ RAA    +P G   LASLPL+ V                     + ALL  +    SR GR                           V+    P      +++Q  +                           W KLA SV VD IGC+SY +PVLGE  D+ WAP+S +LI AMY D  P+   +G  EE+LPFTDIIPTA+LAW+
Sbjct:   80 LKMVPAESGA------RGTVRLRTDIRLHGELRPEVGALLKFLGHYTAVADVAADQVAQVGEKARPFITARAAAAAAVPLGAAALASLPLLLVAAPLVLPLAVVAAAGIAVVATLFALLALS----SRNGRLQRXXXXXXXXRAAPSLXXXXXXXXXXVRALLMPKIEPLIQEMQRDVLGQRIMYNTGPRPTPMQVLRYVAPKSKWPKLAASVAVDFIGCTSYALPVLGEVGDVAWAPLSAVLIAAMYDDKQPYMAYMGFAEEILPFTDIIPTASLAWA 348          
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: A0A6U1M333_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1M333_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.090e-20
Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 1
Query:  784 IQSGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAWS 1020
            + + +W KL LS+ +D IG SSY++PVLGE  D +WAPM  +L+  MY DS PWA  +G  EELLPFTDI+PTAT+AW+
Sbjct:   30 MPTDVWVKLGLSLVIDTIGNSSYLLPVLGEVVDPLWAPMQMMLLYYMYGDSVPWAPYVGLTEELLPFTDIVPTATIAWA 108          
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: A0A7S2VHH7_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VHH7_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.730e-19
Identity = 75/268 (27.99%), Postives = 120/268 (44.78%), Query Frame = 1
Query:  328 EFVVFRLEPVEAGSDFRT--------------EQEDVPNLVLSASLRSPFRSPVQSVARLLQGCASTADVAFD-TVSQQTERLAPYLSRRAARVPKIPAGLLVLASLPLVGVLXXXXXXXXXXXXXXXXXXGGVGALLTAAVWGFSRGGRSWVQGWFNPC------------------TRGSAEKIQ-----SGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAW 1017
            ++++  L+PV   +  RT                E  P L L   L  P+R  + +V  L+ G  +  DV  D TV   ++      + +   VP +P   + + +LP++G +                  G     + ++V+  +R GR+ +Q    P                    R S + +      S M GKL +S+ +DAIG +SY++P+ GE  D+ WAPMS +L+ A+Y D  P    +  +EELLPFTD IP+ATL W
Sbjct:  146 QWLILNLDPVSDSAGTRTPLKSSASRISTSSSSNEQQPTLRLKLRLEGPYRPEIAAVVNLMNGWFTAVDVISDNTVGFVSDIPKNVPAVKLLLVPTVPLATVAIGALPILGGIMIIGIPFFLPIILIVLTLGLSLGAIGSSVYFSTRSGRTRIQHVAEPSYQTFLMTKTGQRIIYDVGPRPSPQSLAHAVLPSDMIGKLIVSLVIDAIGSASYLIPLAGEGFDLTWAPMSMILVGALYDDVMPNLKYIALIEELLPFTDFIPSATLGW 413          
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: B8C7V5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7V5_THAPS)

HSP 1 Score: 100 bits (250), Expect = 8.790e-19
Identity = 79/248 (31.85%), Postives = 113/248 (45.56%), Query Frame = 1
Query:  361 AGSDFRTEQEDVPNLVLSASLRSPFRSPVQSVARLLQGCASTADVAFDTVSQQTERLAPYLSRRAARV-----PKIPAGLLVLASLPLVG-VLXXXXXXXXXXXXXXXXXXGGVGALLTAAVWGFSRGGRSWVQGWFNPC------------------TRGSAEKIQ-----SGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAW 1017
            A S   TEQ   P L L   L  P+R  + +V +L        D+  DT       L   L +    V     P +P   + +A+LP++G VL                    +GA   +A++  +R GR+ +Q    P                    R S + +      + M GKL +S+ VD IG +SY++PVLGE  D+ WAPMS +L+ AMY D  P    +  +EELLPFTDI+P+ATL W
Sbjct:  193 ASSSSLTEQP--PTLRLKLRLEGPYRPEISAVIKLANSWFGAVDIISDTAVGTVSGLVRDLPKNVPAVKLLLVPTVPIATVAVAALPILGGVLIIGIPFFLPIVLIILAAAATIGAA-GSALYFSTREGRTKIQHVAEPTYQTFLMTKTGQRIVYDVGPRPSPQSLAHAVLPTDMIGKLVVSLVVDFIGSASYLLPVLGEGFDLTWAPMSMILVGAMYDDVMPNLKYVALIEELLPFTDILPSATLGW 437          
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: A0A7S1HLC4_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1HLC4_HEMAN)

HSP 1 Score: 88.6 bits (218), Expect = 4.000e-17
Identity = 44/100 (44.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query:  781 KIQSGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAWSCKPPHEVAWIKTGSSLGSTP 1080
            ++    W KLALS+ +D IG  ++++P+LGE  D+ WAPMS LL+  MY   SP    +  LEE LPFTD+IPTAT+ W C+     AW+    +  S P
Sbjct:   26 ELSRDKWWKLALSIMIDFIGMLTFLIPILGEFGDIFWAPMSSLLLFQMY--GSPLLSGIALLEEGLPFTDLIPTATIGWLCEFTIVGAWLGLNLAQASRP 123          
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: M4C415_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C415_HYAAE)

HSP 1 Score: 88.6 bits (218), Expect = 6.860e-17
Identity = 42/71 (59.15%), Postives = 55/71 (77.46%), Query Frame = 1
Query:  805 KLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAW 1017
            KL  S+ +D +G +++VVP LGE AD+VWAP+S  ++D +Y DSSP A  +  LEE+LPFTDIIPTATLAW
Sbjct:   84 KLVASLAIDFVGNATFVVPGLGELADLVWAPVSSKMVDLLYKDSSPRARYVAFLEEVLPFTDIIPTATLAW 154          
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: A0A1E7FPB3_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FPB3_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 8.250e-17
Identity = 71/247 (28.74%), Postives = 114/247 (46.15%), Query Frame = 1
Query:  382 EQEDV---PNLVLSASLRSPFRSPVQSVARLLQ---GCASTADVAFDTVSQQTERLAPYLS---RRAARVPKIPAGLLVLASLPLVGVLXXXXXXXXXXXXXXXXXXGGVGALLTAAVWGFSRGGRSWVQGWFNPCTR-------GSA----------------EKIQSGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAWSCK 1026
            ++ED+   P + +   L  P+R  V ++    Q   G     +    +  Q+  +L P +S   R    +P IPA  +++A+LP+V  +                       +    V+  +R GRS +   F P          G A                + + +G+W KL  S+ +D IG SSY++PV+GE  D+ WAP   +LI AMY D+SP    +  +EE++PFTDIIP+AT+ W C+
Sbjct:  108 KEEDMSPPPTIRIKLKLSGPYRPEVAALVNFTQIWFGIVDKVENGAQSTLQKVPKL-PNISNKHRNLLLIPIIPAAAILVAALPIVVGVVAMAVPFLLPFAILILGLVATTVISGGIVYVSTRKGRSELGLTFGPLIEHWIVSRSGQALVYDTGPRPTPVSVCRQVLPAGVWSKLWTSLLIDLIGSSSYLLPVVGEGFDLGWAPAQTILIMAMYDDTSPNLKYVSFIEEIMPFTDIIPSATIGWGCE 353          
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: A0A7S1ZMQ1_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMQ1_TRICV)

HSP 1 Score: 92.0 bits (227), Expect = 3.480e-16
Identity = 76/269 (28.25%), Postives = 113/269 (42.01%), Query Frame = 1
Query:  331 FVVFRLEPVEA--------GSDFRTEQEDVPNLVLSASLRSPFRSPVQSVARLLQGCASTADVAFDTVSQQTERLAPYL-----SRRAARVPKIPAGLLVLASLPLV-GVLXXXXXXXXXXXXXXXXXXGGVGALLTAAVWGF---SRGGRSWVQGWFNPCTRGSAEK-----------------------IQSGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAW 1017
            +++  L P E         G   + E+E  P L + A L  P+R  V +V +  +    T D   D      + L   L     + +   +P +P   L + +LP+  GVL                  G + A + AA  G    +R GR+ V     P     A                         +   M GKL LS+ +D +G SSY++PV+GE+ D+ WAP   +LI AMY + SP    +   EE+LPFTD+IP+AT  W
Sbjct:   96 WLILNLAPEEGRAADGATEGGGTKGEEEHPPTLRVKARLEGPYRPEVHAVVKASEAWFGTVDNVTDAAGALAKSLTVDLPDKVPALKVLLIPAVPLAGLGVVALPIAAGVLVVGLPFFLPLLVVF----GALAATIAAAAGGLYFSTRDGRARVGPLIGPAYEALAATSTGQRFVYETGDRPSPVALAEAVVPRDMAGKLILSLLIDLVGSSSYLLPVVGEAFDLAWAPTQSVLIAAMYDEVSPNLKYVSFAEEILPFTDVIPSATYGW 360          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTZ9_ECTSI3.260e-14658.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TYL2_9STRA1.640e-2227.83Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A836CGD0_9STRA8.620e-2230.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U1M333_9STRA1.090e-2056.96Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2VHH7_9STRA1.730e-1927.99Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
B8C7V5_THAPS8.790e-1931.85Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S1HLC4_HEMAN4.000e-1744.00Hypothetical protein n=2 Tax=Hemiselmis TaxID=7792... [more]
M4C415_HYAAE6.860e-1759.15Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A1E7FPB3_9STRA8.250e-1728.74Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S1ZMQ1_TRICV3.480e-1628.25Hypothetical protein (Fragment) n=2 Tax=Trieres ch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig13contigP-fluviatile_contig13:382758..389903 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.5
Seed ortholog evalue1.1e-82
Seed eggNOG ortholog2880.D8LTZ9
EggNOG OGs2DMHC@1,2S650@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_003700.1
Exons9
Model size2111
Cds size966
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815541.7639842-UTR-P-fluviatile_contig13:382757..3828951622815541.7639842-UTR-P-fluviatile_contig13:382757..382895Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 382758..382895 +
1693562198.964763-UTR-P-fluviatile_contig13:382757..3828951693562198.964763-UTR-P-fluviatile_contig13:382757..382895Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 382758..382895 +
1622815541.7772052-UTR-P-fluviatile_contig13:384116..3842511622815541.7772052-UTR-P-fluviatile_contig13:384116..384251Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 384117..384251 +
1693562198.9764128-UTR-P-fluviatile_contig13:384116..3842511693562198.9764128-UTR-P-fluviatile_contig13:384116..384251Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 384117..384251 +
1622815541.9117541-UTR-P-fluviatile_contig13:389031..3899031622815541.9117541-UTR-P-fluviatile_contig13:389031..389903Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 389032..389903 +
1693562199.1014075-UTR-P-fluviatile_contig13:389031..3899031693562199.1014075-UTR-P-fluviatile_contig13:389031..389903Porterinema fluviatile SAG_2381UTRP-fluviatile_contig13 389032..389903 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815541.7948031-CDS-P-fluviatile_contig13:384251..3843651622815541.7948031-CDS-P-fluviatile_contig13:384251..384365Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 384252..384365 +
1693562198.9862134-CDS-P-fluviatile_contig13:384251..3843651693562198.9862134-CDS-P-fluviatile_contig13:384251..384365Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 384252..384365 +
1622815541.8074334-CDS-P-fluviatile_contig13:384899..3850311622815541.8074334-CDS-P-fluviatile_contig13:384899..385031Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 384900..385031 +
1693562199.005217-CDS-P-fluviatile_contig13:384899..3850311693562199.005217-CDS-P-fluviatile_contig13:384899..385031Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 384900..385031 +
1622815541.8203528-CDS-P-fluviatile_contig13:385442..3855451622815541.8203528-CDS-P-fluviatile_contig13:385442..385545Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 385443..385545 +
1693562199.0232582-CDS-P-fluviatile_contig13:385442..3855451693562199.0232582-CDS-P-fluviatile_contig13:385442..385545Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 385443..385545 +
1622815541.839456-CDS-P-fluviatile_contig13:386363..3865321622815541.839456-CDS-P-fluviatile_contig13:386363..386532Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 386364..386532 +
1693562199.0403292-CDS-P-fluviatile_contig13:386363..3865321693562199.0403292-CDS-P-fluviatile_contig13:386363..386532Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 386364..386532 +
1622815541.8570204-CDS-P-fluviatile_contig13:387394..3874641622815541.8570204-CDS-P-fluviatile_contig13:387394..387464Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 387395..387464 +
1693562199.05041-CDS-P-fluviatile_contig13:387394..3874641693562199.05041-CDS-P-fluviatile_contig13:387394..387464Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 387395..387464 +
1622815541.8703606-CDS-P-fluviatile_contig13:387848..3879381622815541.8703606-CDS-P-fluviatile_contig13:387848..387938Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 387849..387938 +
1693562199.070505-CDS-P-fluviatile_contig13:387848..3879381693562199.070505-CDS-P-fluviatile_contig13:387848..387938Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 387849..387938 +
1622815541.8842247-CDS-P-fluviatile_contig13:388399..3884641622815541.8842247-CDS-P-fluviatile_contig13:388399..388464Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 388400..388464 +
1693562199.081324-CDS-P-fluviatile_contig13:388399..3884641693562199.081324-CDS-P-fluviatile_contig13:388399..388464Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 388400..388464 +
1622815541.8981268-CDS-P-fluviatile_contig13:388808..3890311622815541.8981268-CDS-P-fluviatile_contig13:388808..389031Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 388809..389031 +
1693562199.0914621-CDS-P-fluviatile_contig13:388808..3890311693562199.0914621-CDS-P-fluviatile_contig13:388808..389031Porterinema fluviatile SAG_2381CDSP-fluviatile_contig13 388809..389031 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig13.1647.1prot_P-fluviatile_contig13.1647.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig13 384252..389031 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig13.1647.1

>prot_P-fluviatile_contig13.1647.1 ID=prot_P-fluviatile_contig13.1647.1|Name=mRNA_P-fluviatile_contig13.1647.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=322bp
MVDEDMYAAGNLRDGGGQEFVVFRLEPVEAGSDFRTEQEDVPNLVLSASL
RSPFRSPVQSVARLLQGCASTADVAFDTVSQQTERLAPYLSRRAARVPKI
PAGLLVLASLPLVGVLGVAGLPLLVPMLAVVAVIGGVGALLTAAVWGFSR
GGRSWVQGWFNPCTRGSAEKIQSGMWGKLALSVTVDAIGCSSYVVPVLGE
SADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAWSC
KPPHEVAWIKTGSSLGSTPGGRKQGDVYDSKENVGASGVRYPSNPDGDHS
MGAVGAPKILAFRARRLCSSI*
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mRNA from alignment at P-fluviatile_contig13:382758..389903+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig13.1647.1 ID=mRNA_P-fluviatile_contig13.1647.1|Name=mRNA_P-fluviatile_contig13.1647.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7146bp|location=Sequence derived from alignment at P-fluviatile_contig13:382758..389903+ (Porterinema fluviatile SAG_2381)
CTGCGCAGGGGTACGAAGGTATACGTGGAGGCGCGGCTCGGGAGCCTTCT TGTGCAACGACTATCGCCCGTCAGCGTCGATCCCTTGACCGGAGATTTCT CGTACGATGGTGCGACGGACAACATCGCCGTTTTCAACGTGAGCACCGGG TCATACTAATATTCGTGCTGCTACTCCCCTTGCCGTTCCTTCCCAGACAA CAAACGTCGACAATGGCGGCATTTGCACTGTTGTAGTGGACCATGAGATA TCACTCCTGGCGTCATCTTCATCCCCACATCCTCCTCCGAAGCTTGCTCC CCCTTTTCCCCGTGGAACATCCCTCGCGCCGGAGTATTTTTAGGTATTAC ATCGCGAGGTCGGGAAACTCCTCAAAGCTATGGAATGGCAACGTCGTGGG TGCGATTGCGTGGCAGGTAGATCGTGGGCGTGCGTACGCATAGAAATGCA GTAACCGTCTGGACGAATCACTAACACGCACGTCTGTGCTCATAACCCTC TTGTCACCCTTCGTCTTGTCGCCCGTACGCTCGCCTGCCCACCGCATTTT GCGAAGTAAATAAGGACCTACGTTGTATTCCACCCGGGTGGACAGAAGCT AAATCAAAATCGGATAATTTATCACCCGGCCTACATCGTATGTCAGACCC ACTAGGATATTACACGGACCTCCCCTGGTACCACACACGGGTTAGCGTCA GCTCGGCCCACGTACCACCAGTGGGAGACTCACGCGAAACGAAGGGCCGC ACGCACGCAAACATCCTTACGAGACCGCGGCGATGGAGATCAATTCCAGC TGCAGGGAGGGGAGAAACACAAAACGTTTGGTCTCCACAGCCTCGACTGC CGCGGCCGCGAGCGAAATTTACCCATATCTTCTTTGTAGAGACATCGCAC CCCGTTCACCCCCTGTCTTTCACTCGTTGCTTAGCCATTGCCACACGATA TCACCTCCAATCTTATCATTCCCCCCCCTGTTGATTTCGCGGGAAGGTGT GTATTGACAGTTCCGAATCGGCACGCAGGTTTTCACCCGGCCGGCCTATG TTGTTGTCAGACTCCCCCCACATCATACCACCCAGGTGATAGGAAAATGA GAACGGAAACTGGTTTTCACCGGGGTCTGACATGCTCTGTAGACTACGTT ACCCACTGTCATCACCTTAGTTCCTGAGGCTAGGCCTTCGGGAGACGCGA CGTCTTTCCCCAATGCACGGCCTTGAGCAGTTATCGAGTTTCTCCCTTCA TGTGCTTCCTCGCAACCTCTGTATGGAATAATAGGTCTTCCCCTGCCGCC ATTCCATCTCCACCTCCCACCCGATGTGTTCGCGCCCACTTCCAACTTGC TGCGATTAGAACAACACCCTGGAAGAAATATACGGGGAGACGCTTCACGT CGTGCTCCGGTCGTGGGACCCTACCTCCAGCTGGGTGGACTCCGCCCAGA TCCTTATCGCCGTACGGTCAATATCGATATATCCGACCGTTGGAATGGTG GACGAGGACATGTACGCGGCGGGGAATCTTCGCGACGGCGGAGGGCAAGA ATTTGTAGTTTTTCGGCTCGAGCCTGTCGAGGCAGGGAGCGATTTCCGCA CAGAACAAGTGAGTCGATGCGCCGTCGTTTTCGACTGTTTTTGCGCGTGG AGCCGGGATGCTTAAGTTTTCCTGCTTTTTACCGGAGTCCATTGCAACCC GTCCGCGTTCGGCTCGAGCGTGGTTTGTATCCCATGTGGAGCAGAACGAG GGCTGGAAATATTGAAGGCGATGCTTTTCTGCTCTGCTACTGCCTACAGG GAGCAGACGCCCTTTCCCATGCATTCCGATCGGACGGAACATCGCCGCTG AAGGGATCGCATGCTTCTTTTGCACGTCTCATCTGTCACCCCCTATCCGT ATCTCGTTCAAGCGGTGATCTCATCGATCAACGCTTTCGGTAGTCCCGTT CGACCTACGTTCTTTTGTGGCGCAGCTCGCTCGTGCTCTATCAAGTCATT TCGAGGCTTATGTAGGTCGCCTTTTTGACTGGCTGCTTGCCGTAGGTGCT TCTTGAGACGAATCCGATACCGCAGCAAAACATGGAAGCCTCTCTCGCAC GCGAATACAATTTACCTCATTCTTTCGCCTCAACACAAACAGGAAGACGT CCCGAACCTGGTCTTGAGTGCCTCCCTCCGGAGCCCTTTTCGCTCCCCCG TGCAGTCGGTGGCGCGACTCCTGCAAGGCTGCGCCTCGACCGCGGACGTC GCTTTCGACACCGTTTCCCAGCAGGTACGTTGTCACCTTTTTCGGGGTGT AGAAGTGGAGGTGACGTAAATGTTTGGGCGCAGACCGTGTTTTTGTTTAT CCTTTCTCGTTTATTTCCTGCTGCAGATCGTGTTTTCACTGATCCTTTCT TGATGACGATTGTTCCCTGGCGCGGATCAAAATAAGCAAAAATGTCCAAG AATCGTGAGCACAAATTTCTTGCGAGGACTTCGTGGGGGCACTTTTTTGG GACCACTCTTCCACAAGAATAACGAAATTACACGGCCCGACACGGAGTTG TACGTGTGCAGACAGAACGCTCTTTTCTAATCCGCCGCCTTTCAAGCGTG TGCTCAATGTAATTGAGAGTATATTTTCGAAGGTCTGCCATTTTCGCGTG TCGATTGCAACTACCTTGAATGATCTGGAGTACAGACGGAGCGCCTCGCC CCGTACTTGAGTAGACGAGCCGCCCGCGTGCCCAAGATCCCGGCAGGGCT TCTGGTCTTAGCCTCTCTTCCGCTCGTCGGCGTTCTAGGTCAGTAATTTG CGTGCTGAATTGTTCCCGTTCAGCTCACGACCGCGACTGCTGTCTGGGTT AGGATAATGACTCGATTTTCACATCTGGCGTGCTGCTCTCGTGCACTAGG CATCGACGTTGTGCCTCTTGCAGTCCGCTGTTTGCTTCGTTTTTGGCGCG ACGTTCAGTTCCTTTGCAGGCCAGCCGGGTTCGCACATCGCAGGAGCATG AACTAGCGCGCACAAGGGTTATGACGCACAGAAAATAGCAGAAAGGACGG CGCCGCCACCAACAGCAGGTTGCCGTTCAACGCAGATAGATGTGGGCCAC TTTGTTCAGAAAGTGCAGCCCAGCAGAAGGAATTCGTACAATAGAGGATG TACTTCACTTGGTGTGTGAAAAGCTGTCGTGTTTCCGGGAACGCTGCAGC AGGGGACGGAATTCCGCGGCAGGGACGATTGCATTGGCCCGACGCAGCCA TCCGGGGGGCAGTGCGGCCGATTCTGTGGCCGTCGTGCCTTGGAAACCTG TTCCTCGCGCCACGGCGGCCAGACCTCCGATCTACTGAAGGGGTTCCGAT TTCGAGGGGATCTCGGGAGCATGGTTTCACGTTTTGGATCGTTGGGTGCT CTAAGTCGTCGAACACTGAGGCAGCGCAACACGTAACAGGGTGACGCGTG TTGGCTGCCATTTCGCCAACTATGGGCCGGAACTAATGCTTCCCCGGTTC CTCGCCCTCAACACGCAACGGGCGTTTGAGACAATCTGTCAGCAGTTCGA CGAGCCGCTGTGTCTGGGAATCGTGTTTCATGTCCCCTTCTGGCTGGATA CATCAGGTGTGGCCGGCCTGCCCCTTCTTGTGCCGATGCTGGCTGTGGTT GCTGTCATCGGAGGTGTCGGAGCTCTACTGACGGCAGCTGTTTGGGGCTT CAGCCGTGGTGGCCGCTCGTGGGTGCAGGGGTGGTTCAACCCGTGTACGA GAGGGTCGGCAGAGAAGATCCAGAGGTGCGGAAACGATGTGCCAGGGTTG ATGTGGATTTTCTTATCCCCGAAGCACCATGTGCCCTCATGCTTGCGTCT GTTAGGACTCGGAAAATCCAAGCCGACGTTGTGCTGCAATCGAGCGACGT TTTGTGTGCCCTATAAACCTGAAATCAACCCATTGAACTAGTCAGCGCTG ACTAGTTCAACTATAAACCTGAAATCAACCCATTGAACTAGTCAGCGCTG ACTAGTTCAACTATAAACCTGAAATCAACCCATTGAACTAGTCAGCGCTG ACTAGTTCAATGGGTTGATTTCAGGTTTATAAAAGTAAGTCGTGGGTTCG AGACCCGGGCTGTGCACTGAGCTGACTAGTTCAATGGGTTGATTTCAGGT TTATAAAAGTAAGTCGTGGGGTCCGGATTCCCCTTGCACTACACTTCCGA GGAGGGTGGCGCTCCCCTTGCCAGCCGCTACTGTCGTCCCATGGGTATTT CAGTTTATATTCCTCGCCCGCACTCTTCCACGAGTGTCGAAAGCCTCAGA AAAAAAGCCACCTCAGTGCACAGCCCGGGTCTCGAACCCACGACTTACTT TTATAAACCTGAAATCAACCCATTAAAGTAGTCAGCGCTGACTAGTTCAA TGGGTTGATTTCAGGTTTATAGCCCTTTACGTGCATGCGCGCATTCCTTC ATGATCCTCTGGATGTAGAGATGACAACACGGCCGATCTAGCCAATATTC TTTGTGCGCTGTTGGTAATCTTCCACTCGTTGCGTAACAGCTACCCCTTG TCTCCCGGAACGCATGCAAGAGCAGGTGCTTTATCCTGTCGGCCCCGGAC CCTCGCCTGCCCGCATCGCGCGCTCCTTGGTGCCCAGCGGAATGTGGGGC AAGCTCGCGTTGTCCGTGACGGTGGATGCAATCGGGTGCTCTTCCTACGT TGTTCCGGTAAGTTTGAGCCATTCCGCTTCTTGATGCCATCGCTTCGAGC GTCTTTGTTTTTGTTTCCTGTACTCGAGCATGTCACGACGCTTCGAGCTC GTGAGTATGGTTCACAGCCTGATCCGATGAACACAACGGTGCACCGTGAA CTAGTCATGCGTAAACAGGGGTGCGCGGTCTGGTGGTGCGATCGCGGCAT GCACGCTATCGCGTCTTGCGACGCCTCGCCTCGATGCCACACACAGCAGC CACGTGTTTCCAACCAAACGGTTTGTCCCGAAATCAACAAATCATTCCGG GTGGTTGCAAGTAAGGGTTGTAAGTCTTCACCTTGCCCGCCTTTCCTGCT CTTTTCCGCCCTTGTTTCTCCGCCGCGGCCCGTCGGTTCAGGTTCTTGGC GAATCGGCCGACATGGTCTGGGCTCCGATGTCTTACCTCCTAATCGATGC AATGTACCATGACTCAAGCCCTTGGGCCGGGGTGAGAGCAACGTTTTGTG TGCCTATGCGCTTGTGTGTGGAAGCAGGAGCAAATTTCTCGACCGGACCG CAAACATGGGCAAGTTTTCCGTTGAATTGCCTGATTTTGTTCCGAGTCCG TCCTGGCCGACCGTTCAAAGTGCATGAATCTTGCGATATTTGACCTTGAC CATTAATCGCTGCTTGTCCGGACTTGAGTGTAGTGAGACCGCCGTTTCGG TGTTGGTGCTGCAGCACACGTTGTTGGGAGCTATTGCTACCCCTGCTGCT GAATGTTAAATTGCTGCTGCTGCTTCTGCTGATCTCCCCTGGGGTGCTCG CCTTTTTGGTAATGCTTCGTTTGATGGCGATGTCTGACCGCGCGGTGTGC TTCCCATCCCATGGCCCTCGTCTCTGAACCGTGCTTGTCATGCTTTTTTC GTTGGGCGTGATTTTTTTCGGCGATATTGACCCCCCCAACAGGCACTAGG CGCATTGGAAGAGCTTCTCCCGTTCACTGACATCATCCCGACCGCCACAC TGGCTTGGTAAGAAGGAGAAACCACTGCAAACCGCCTGGTAACCGCATAG CTCACGGGCACCCTCAGTCAGCACTGGCCACTGTGCCCTGAGAAGTCCGC GCGGTGTGGATGACGTTACCCGGGAACCCACTGAGTCGCGGAGCTTATAA GTTGCTCGATTGCAACGTGATATAGTGGCTGGCGATATTTTGGATCGAGT TTGAAAGTCAGCAGTCAGCGGCAGCGTTTGTTTCCTCGGTGCCTTCTCAA CGCCAACATCGAGCAGCAAACAAGTTTTTCACCGTTGCGCCCCAACTTCT GCCTCCCAAATCCACTACAGGCTAAAAGAGTACGTGCCTCTTATGCTGCA GGAGCTGCAAGCCACCGCACGAAGTCGCATGGATCAAGACCGGCAGCTCG CTCGGCAGCACGCCCGGCGGCAGGAAGCAGGGTGACGTCTACGATTCGAA GGAGAACGTTGGCGCTAGTGGTGTCCGTTACCCCAGCAATCCCGACGGCG ACCACTCCATGGGAGCAGTAGGCGCGCCGAAAATTCTTGCTTTTCGCGCT AGAAGATTGTGTTCTTCTATTTAACGATTGCCGTGTCGCCGAGCCGTGAG GCGAACAAGCCCTCGGCAACTTTTCGTTGTTGCTTTTGTCTCGCGGGAGT TGTGTTGTATCAAGTTTGCATTTGTGAGTGGAGGTGTGAGATTCTTCTTC CTGGAGTGCCGGACGGCAGCGCTAGGTTGGGAGCGTTCAAATGACTCTAC TGCGTTCAATTTCGTGGAAATAGAAAAGATGGGCAGGGATTGCACGGGTT TTGTGAACGTTCGGCATCGAGTACACCTGAGTCATATCGGTCTTGACCTT TCTGGTATCATGGTTCCGAACCGAGCGATCACGAACAAGACAGTGCCCGT CCACCGAAAATAAACAACGAACAATAAAAACGGGGGAGGGGGCACACAGC AGGGCCAGGGTTCTGGTTGCGTAGGTGACAATCTTCTCCGGCTTAGCTCT TTTCGTTTGGTTATCAAGGCGAAGGTGCAGCGTTGTTGTTTCCTTCGATT TGTCCGGTCTGAATATTTGTTGAAGACGAGAGGCTTTAGCGAAGGAGAAG AGGCTGCGTGTGAGAGACATCCCTCGCATCACAAGACGCCAATCGGTGAT TGGTGTAGATCTCGGTGGTCGAGAAACACAGGTCAACCAGGATGCTCGCA TTGCAAAACCCCCGCCATATTGATGTTTCTGTGCAATTCGTCCATCAGGT AGCAGGTGCCGCCGGAATCGAGGATGGCGCCGTACAGTATTCTCGGCTGG TAGGGCGGGGTGAGATGAGGGGGAGGAGGCTTTTCCTGGCGGTGCTCTCG TCGGTGGCAAGCGTAGGGTGCGGGGGTGGGCGAGGTGTGGGGCGAGGCAA AATATTAAGGGGTTTCCCCATGCGGCGAAAAAAGTTAACGAAGGAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig13:382758..389903+

>mRNA_P-fluviatile_contig13.1647.1 ID=mRNA_P-fluviatile_contig13.1647.1|Name=mRNA_P-fluviatile_contig13.1647.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1932bp|location=Sequence derived from alignment at P-fluviatile_contig13:382758..389903+ (Porterinema fluviatile SAG_2381)
ATGGTGGACGAGGACATGTACGCGGCGGGGAATCTTCGCGACGGCGGAGG
GCAAGAATTTGTAGTTTTTCGGCTCGAGCCTGTCGAGGCAGGGAGCGATT
TCCGCACAGAACAAATGGTGGACGAGGACATGTACGCGGCGGGGAATCTT
CGCGACGGCGGAGGGCAAGAATTTGTAGTTTTTCGGCTCGAGCCTGTCGA
GGCAGGGAGCGATTTCCGCACAGAACAAGAAGACGTCCCGAACCTGGTCT
TGAGTGCCTCCCTCCGGAGCCCTTTTCGCTCCCCCGTGCAGTCGGTGGCG
CGACTCCTGCAAGGCTGCGCCTCGACCGCGGACGTCGCTTTCGACACCGT
TTCCCAGCAGGAAGACGTCCCGAACCTGGTCTTGAGTGCCTCCCTCCGGA
GCCCTTTTCGCTCCCCCGTGCAGTCGGTGGCGCGACTCCTGCAAGGCTGC
GCCTCGACCGCGGACGTCGCTTTCGACACCGTTTCCCAGCAGACGGAGCG
CCTCGCCCCGTACTTGAGTAGACGAGCCGCCCGCGTGCCCAAGATCCCGG
CAGGGCTTCTGGTCTTAGCCTCTCTTCCGCTCGTCGGCGTTCTAGACGGA
GCGCCTCGCCCCGTACTTGAGTAGACGAGCCGCCCGCGTGCCCAAGATCC
CGGCAGGGCTTCTGGTCTTAGCCTCTCTTCCGCTCGTCGGCGTTCTAGGT
GTGGCCGGCCTGCCCCTTCTTGTGCCGATGCTGGCTGTGGTTGCTGTCAT
CGGAGGTGTCGGAGCTCTACTGACGGCAGCTGTTTGGGGCTTCAGCCGTG
GTGGCCGCTCGTGGGTGCAGGGGTGGTTCAACCCGTGTACGAGAGGGTCG
GCAGAGAAGATCCAGAGGTGTGGCCGGCCTGCCCCTTCTTGTGCCGATGC
TGGCTGTGGTTGCTGTCATCGGAGGTGTCGGAGCTCTACTGACGGCAGCT
GTTTGGGGCTTCAGCCGTGGTGGCCGCTCGTGGGTGCAGGGGTGGTTCAA
CCCGTGTACGAGAGGGTCGGCAGAGAAGATCCAGAGCGGAATGTGGGGCA
AGCTCGCGTTGTCCGTGACGGTGGATGCAATCGGGTGCTCTTCCTACGTT
GTTCCGCGGAATGTGGGGCAAGCTCGCGTTGTCCGTGACGGTGGATGCAA
TCGGGTGCTCTTCCTACGTTGTTCCGGTTCTTGGCGAATCGGCCGACATG
GTCTGGGCTCCGATGTCTTACCTCCTAATCGATGCAATGTACCATGACTC
AAGCCCTTGGGCCGGGGTTCTTGGCGAATCGGCCGACATGGTCTGGGCTC
CGATGTCTTACCTCCTAATCGATGCAATGTACCATGACTCAAGCCCTTGG
GCCGGGGCACTAGGCGCATTGGAAGAGCTTCTCCCGTTCACTGACATCAT
CCCGACCGCCACACTGGCTTGGCACTAGGCGCATTGGAAGAGCTTCTCCC
GTTCACTGACATCATCCCGACCGCCACACTGGCTTGGAGCTGCAAGCCAC
CGCACGAAGTCGCATGGATCAAGACCGGCAGCTCGCTCGGCAGCACGCCC
GGCGGCAGGAAGCAGGGTGACGTCTACGATTCGAAGGAGAACGTTGGCGC
TAGTGGTGTCCGTTACCCCAGCAATCCCGACGGCGACCACTCCATGGGAG
CAGTAGGCGCGCCGAAAATTCTTGCTTTTCGCGCTAGAAGATTGTGTTCT
TCTATTTAAGAGCTGCAAGCCACCGCACGAAGTCGCATGGATCAAGACCG
GCAGCTCGCTCGGCAGCACGCCCGGCGGCAGGAAGCAGGGTGACGTCTAC
GATTCGAAGGAGAACGTTGGCGCTAGTGGTGTCCGTTACCCCAGCAATCC
CGACGGCGACCACTCCATGGGAGCAGTAGGCGCGCCGAAAATTCTTGCTT
TTCGCGCTAGAAGATTGTGTTCTTCTATTTAA
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