mRNA_P-fluviatile_contig13.1647.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: D8LTZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTZ9_ECTSI) HSP 1 Score: 442 bits (1136), Expect = 3.260e-146 Identity = 241/409 (58.92%), Postives = 285/409 (69.68%), Query Frame = 1
Query: 1 LRRGTKVYVEARLGSLLVQRLSPVSVDPLTGDFSYDGATDNIAVFNNNTLEEIYGETLHVVLRSWDPTSSWVDSAQILIAVRSISIYPTVGMVDEDMYAAGNLRDGGGQEFVVFRLEPVEAGSDFRTEQEDVPNLVLSASLRSPFRSPVQSVARLLQGCASTADVAFDTVSQQTERLAPYLSRRAARVPKIPAGLLVLASLPLVGVLXXXXXXXXXXXXXXXXXXGGVGALLTAAVWGFSRGGRSWVQGWFNPC---------------------TRGSAEKIQSGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAWSCKPPHEVAWIKTGSSLGSTPGGRKQGDVYDSKENVGASGVRYPSNPDG 1164
L+ GTKVYVE RLG L VQRLSPVSVDP+TGDFSY+ AT NI VFN+N LEEI+ ETLH+VLRSW PTS+WVDSA+ILI+VRSISI TV DM G+ ++F+VFRLEPV G F+T E VPNLVLSA+LRSPFR PV+SVARLLQGCAST D+A DTVS QTER+APYL+ +AA VP IPAG++VLASLPL+ VL GGVGALLTAAVW FSRGGR+WVQ P R + + +GMW KLA+S+ VD IGC+SY+VP+LGESAD++WAP+SYLLIDAMYH SSPWAG GA+EELLPFTDIIPTATLAW + ++ L + R++ VY S +NVG GV +PS PDG
Sbjct: 25 LKWGTKVYVEVRLGDLHVQRLSPVSVDPVTGDFSYESATGNITVFNSNILEEIFDETLHIVLRSWHPTSNWVDSAKILISVRSISIDSTVRPTGVDM---GDESGEADRDFMVFRLEPVPGGDSFQTADESVPNLVLSATLRSPFRPPVESVARLLQGCASTVDLALDTVSLQTERVAPYLTSQAALVPTIPAGIVVLASLPLLCVLGVAGLPLLVPMLIVVAAVGGVGALLTAAVWLFSRGGRAWVQRAVRPVYDRVGRDNPEVLYPVGPGPSPARIAQCLVPTGMWSKLAMSIAVDTIGCTSYIVPILGESADLLWAPVSYLLIDAMYHGSSPWAGVFGAMEELLPFTDIIPTATLAWMKEYLPQML-----QGLSAADQNRQEQHVYHSDDNVGPGGVHFPSQPDG 425
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: W7TYL2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYL2_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.640e-22 Identity = 91/327 (27.83%), Postives = 139/327 (42.51%), Query Frame = 1
Query: 109 GATDNIAVFNNNTLEEIYGETLHVVLRSWDPTSSWVDSAQILIAVRSISIYPTVGMVDEDMYAAGNLRDGGGQEF-VVFRLEPVEAGSDFRTEQEDVPNLVLSASLRSPFRSPVQSVARLLQGCASTADVAFDTVSQQTERLAPYLSRRAARVPKIPAGLLVLASLPLVGVLXXXXXXXXXXXXXXXXXXGGVGALLTAAVWGFSRGGRSWVQGWFNPCTR-----GSAEKI------------------QSGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAW 1017
GA VF LE++Y E L L + + S + Q + V+ + I G++F F L P E P + LS L P R + ++ ++ ST D D + PY++ + +P G+L+LA+ P +GV G + + + SR GR V+ +P R + +++ G W +L S+ +D IG SSY++PVLGE D+ WAP+ + + AMY ++SP+A +G +EELLPFTDIIPTATLAW
Sbjct: 137 GARPEAVVFTQKKLEDLYKENLKFKLINKE---SKMVLGQSQLPVKKLMI---------------------GKKFEAFFNLAPPPVAGKRAAEVHAGPAIRLSVELMGPLRKEFRFLSDVVSKYYSTVDRTLDGAAAAGHAAQPYVANKWTLPLLVPFGVLLLAASPFMGVALTIGLPVFLPLLLLGLVAGLTMLIASIILALSSRAGRGRVEALVDPVIRKLTHTATGQQLLYETGPRPSPLRIAKTFAPKGRWERLVTSLILDTIGASSYLLPVLGEFTDLAWAPLFAVALHAMYSETSPYAHYVGLVEELLPFTDIIPTATLAW 439
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: A0A836CGD0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGD0_9STRA) HSP 1 Score: 108 bits (270), Expect = 8.620e-22 Identity = 85/279 (30.47%), Postives = 117/279 (41.94%), Query Frame = 1
Query: 340 FRLEPVEAGSDFRTEQEDVPNLVLSASLRSPFRSPVQSVARLLQGCASTADVAFDTVSQQTERLAPYLSRRAARVPKIPAGLLVLASLPLVGVLXXXXXXXXXXXXXXXXXXGGVGALLTAAVWGFSRGGR-------------------------SWVQGWFNPCTRGSAEKIQSGM---------------------------WGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAWS 1020
++ P E+G+ L L R V ++ + L + ADVA D V+Q E+ P+++ RAA +P G LASLPL+ V + ALL + SR GR V+ P +++Q + W KLA SV VD IGC+SY +PVLGE D+ WAP+S +LI AMY D P+ +G EE+LPFTDIIPTA+LAW+
Sbjct: 80 LKMVPAESGA------RGTVRLRTDIRLHGELRPEVGALLKFLGHYTAVADVAADQVAQVGEKARPFITARAAAAAAVPLGAAALASLPLLLVAAPLVLPLAVVAAAGIAVVATLFALLALS----SRNGRLQRXXXXXXXXRAAPSLXXXXXXXXXXVRALLMPKIEPLIQEMQRDVLGQRIMYNTGPRPTPMQVLRYVAPKSKWPKLAASVAVDFIGCTSYALPVLGEVGDVAWAPLSAVLIAAMYDDKQPYMAYMGFAEEILPFTDIIPTASLAWA 348
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: A0A6U1M333_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1M333_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.090e-20 Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 784 IQSGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAWS 1020
+ + +W KL LS+ +D IG SSY++PVLGE D +WAPM +L+ MY DS PWA +G EELLPFTDI+PTAT+AW+
Sbjct: 30 MPTDVWVKLGLSLVIDTIGNSSYLLPVLGEVVDPLWAPMQMMLLYYMYGDSVPWAPYVGLTEELLPFTDIVPTATIAWA 108
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: A0A7S2VHH7_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VHH7_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.730e-19 Identity = 75/268 (27.99%), Postives = 120/268 (44.78%), Query Frame = 1
Query: 328 EFVVFRLEPVEAGSDFRT--------------EQEDVPNLVLSASLRSPFRSPVQSVARLLQGCASTADVAFD-TVSQQTERLAPYLSRRAARVPKIPAGLLVLASLPLVGVLXXXXXXXXXXXXXXXXXXGGVGALLTAAVWGFSRGGRSWVQGWFNPC------------------TRGSAEKIQ-----SGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAW 1017
++++ L+PV + RT E P L L L P+R + +V L+ G + DV D TV ++ + + VP +P + + +LP++G + G + ++V+ +R GR+ +Q P R S + + S M GKL +S+ +DAIG +SY++P+ GE D+ WAPMS +L+ A+Y D P + +EELLPFTD IP+ATL W
Sbjct: 146 QWLILNLDPVSDSAGTRTPLKSSASRISTSSSSNEQQPTLRLKLRLEGPYRPEIAAVVNLMNGWFTAVDVISDNTVGFVSDIPKNVPAVKLLLVPTVPLATVAIGALPILGGIMIIGIPFFLPIILIVLTLGLSLGAIGSSVYFSTRSGRTRIQHVAEPSYQTFLMTKTGQRIIYDVGPRPSPQSLAHAVLPSDMIGKLIVSLVIDAIGSASYLIPLAGEGFDLTWAPMSMILVGALYDDVMPNLKYIALIEELLPFTDFIPSATLGW 413
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: B8C7V5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7V5_THAPS) HSP 1 Score: 100 bits (250), Expect = 8.790e-19 Identity = 79/248 (31.85%), Postives = 113/248 (45.56%), Query Frame = 1
Query: 361 AGSDFRTEQEDVPNLVLSASLRSPFRSPVQSVARLLQGCASTADVAFDTVSQQTERLAPYLSRRAARV-----PKIPAGLLVLASLPLVG-VLXXXXXXXXXXXXXXXXXXGGVGALLTAAVWGFSRGGRSWVQGWFNPC------------------TRGSAEKIQ-----SGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAW 1017
A S TEQ P L L L P+R + +V +L D+ DT L L + V P +P + +A+LP++G VL +GA +A++ +R GR+ +Q P R S + + + M GKL +S+ VD IG +SY++PVLGE D+ WAPMS +L+ AMY D P + +EELLPFTDI+P+ATL W
Sbjct: 193 ASSSSLTEQP--PTLRLKLRLEGPYRPEISAVIKLANSWFGAVDIISDTAVGTVSGLVRDLPKNVPAVKLLLVPTVPIATVAVAALPILGGVLIIGIPFFLPIVLIILAAAATIGAA-GSALYFSTREGRTKIQHVAEPTYQTFLMTKTGQRIVYDVGPRPSPQSLAHAVLPTDMIGKLVVSLVVDFIGSASYLLPVLGEGFDLTWAPMSMILVGAMYDDVMPNLKYVALIEELLPFTDILPSATLGW 437
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: A0A7S1HLC4_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1HLC4_HEMAN) HSP 1 Score: 88.6 bits (218), Expect = 4.000e-17 Identity = 44/100 (44.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query: 781 KIQSGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAWSCKPPHEVAWIKTGSSLGSTP 1080
++ W KLALS+ +D IG ++++P+LGE D+ WAPMS LL+ MY SP + LEE LPFTD+IPTAT+ W C+ AW+ + S P
Sbjct: 26 ELSRDKWWKLALSIMIDFIGMLTFLIPILGEFGDIFWAPMSSLLLFQMY--GSPLLSGIALLEEGLPFTDLIPTATIGWLCEFTIVGAWLGLNLAQASRP 123
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: M4C415_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C415_HYAAE) HSP 1 Score: 88.6 bits (218), Expect = 6.860e-17 Identity = 42/71 (59.15%), Postives = 55/71 (77.46%), Query Frame = 1
Query: 805 KLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAW 1017
KL S+ +D +G +++VVP LGE AD+VWAP+S ++D +Y DSSP A + LEE+LPFTDIIPTATLAW
Sbjct: 84 KLVASLAIDFVGNATFVVPGLGELADLVWAPVSSKMVDLLYKDSSPRARYVAFLEEVLPFTDIIPTATLAW 154
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: A0A1E7FPB3_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FPB3_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 8.250e-17 Identity = 71/247 (28.74%), Postives = 114/247 (46.15%), Query Frame = 1
Query: 382 EQEDV---PNLVLSASLRSPFRSPVQSVARLLQ---GCASTADVAFDTVSQQTERLAPYLS---RRAARVPKIPAGLLVLASLPLVGVLXXXXXXXXXXXXXXXXXXGGVGALLTAAVWGFSRGGRSWVQGWFNPCTR-------GSA----------------EKIQSGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAWSCK 1026
++ED+ P + + L P+R V ++ Q G + + Q+ +L P +S R +P IPA +++A+LP+V + + V+ +R GRS + F P G A + + +G+W KL S+ +D IG SSY++PV+GE D+ WAP +LI AMY D+SP + +EE++PFTDIIP+AT+ W C+
Sbjct: 108 KEEDMSPPPTIRIKLKLSGPYRPEVAALVNFTQIWFGIVDKVENGAQSTLQKVPKL-PNISNKHRNLLLIPIIPAAAILVAALPIVVGVVAMAVPFLLPFAILILGLVATTVISGGIVYVSTRKGRSELGLTFGPLIEHWIVSRSGQALVYDTGPRPTPVSVCRQVLPAGVWSKLWTSLLIDLIGSSSYLLPVVGEGFDLGWAPAQTILIMAMYDDTSPNLKYVSFIEEIMPFTDIIPSATIGWGCE 353
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Match: A0A7S1ZMQ1_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMQ1_TRICV) HSP 1 Score: 92.0 bits (227), Expect = 3.480e-16 Identity = 76/269 (28.25%), Postives = 113/269 (42.01%), Query Frame = 1
Query: 331 FVVFRLEPVEA--------GSDFRTEQEDVPNLVLSASLRSPFRSPVQSVARLLQGCASTADVAFDTVSQQTERLAPYL-----SRRAARVPKIPAGLLVLASLPLV-GVLXXXXXXXXXXXXXXXXXXGGVGALLTAAVWGF---SRGGRSWVQGWFNPCTRGSAEK-----------------------IQSGMWGKLALSVTVDAIGCSSYVVPVLGESADMVWAPMSYLLIDAMYHDSSPWAGALGALEELLPFTDIIPTATLAW 1017
+++ L P E G + E+E P L + A L P+R V +V + + T D D + L L + + +P +P L + +LP+ GVL G + A + AA G +R GR+ V P A + M GKL LS+ +D +G SSY++PV+GE+ D+ WAP +LI AMY + SP + EE+LPFTD+IP+AT W
Sbjct: 96 WLILNLAPEEGRAADGATEGGGTKGEEEHPPTLRVKARLEGPYRPEVHAVVKASEAWFGTVDNVTDAAGALAKSLTVDLPDKVPALKVLLIPAVPLAGLGVVALPIAAGVLVVGLPFFLPLLVVF----GALAATIAAAAGGLYFSTRDGRARVGPLIGPAYEALAATSTGQRFVYETGDRPSPVALAEAVVPRDMAGKLILSLLIDLVGSSSYLLPVVGEAFDLAWAPTQSVLIAAMYDEVSPNLKYVSFAEEILPFTDVIPSATYGW 360 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1647.1 >prot_P-fluviatile_contig13.1647.1 ID=prot_P-fluviatile_contig13.1647.1|Name=mRNA_P-fluviatile_contig13.1647.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=322bp MVDEDMYAAGNLRDGGGQEFVVFRLEPVEAGSDFRTEQEDVPNLVLSASLback to top mRNA from alignment at P-fluviatile_contig13:382758..389903+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1647.1 ID=mRNA_P-fluviatile_contig13.1647.1|Name=mRNA_P-fluviatile_contig13.1647.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7146bp|location=Sequence derived from alignment at P-fluviatile_contig13:382758..389903+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:382758..389903+ >mRNA_P-fluviatile_contig13.1647.1 ID=mRNA_P-fluviatile_contig13.1647.1|Name=mRNA_P-fluviatile_contig13.1647.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1932bp|location=Sequence derived from alignment at P-fluviatile_contig13:382758..389903+ (Porterinema fluviatile SAG_2381)back to top |