mRNA_P-fluviatile_contig13.1646.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1646.1 vs. uniprot
Match: D7FMV3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMV3_ECTSI) HSP 1 Score: 320 bits (821), Expect = 3.670e-96 Identity = 182/362 (50.28%), Postives = 231/362 (63.81%), Query Frame = 1
Query: 631 DYLGLVTKTAVSSRMRLVFLVGLEGTGHHYLADVLDDTCQTASVLCPKVCQMAEALYPDLALPKSATDYELARKKLRHEMDTLAAYAREKIAEGKVAIASFGLCRFEAGMMSYPNFKGPDKPLQYVDFRLLAEEAERAGVDIRFVYLSRSAKSILISSIQHKHYAETFMKEARALLNNAAVVESTFRELGPGFATCFRYEDIADPDQADRVSRFIAPTEDVAQRLGQKMLAKISSRSPPAHVMVAAAQRPATNIHRKQQQQRFMKGGSRQRYTGGAGPRHTAHHEHL--SRGLRGGSPEPW------------------NSEGGSSAAKD---------LVAARLQQKLDRIEKDMCVTTTS 1629
+Y +V K VSS++R++FLVGLEGTGHHY +V DD C TA+V C C +A+ALYP LA P + DYE AR++LR E++ LAAY E + EG+ AIA F CR ++GMMS+PNF G DK LQYVDFRLLAEEAERAGVD+RFVYL+RSA+SIL+S QH HY TFM+E+RAL+NNAAVVESTF+ELGPGFATCFRYE ++DP+Q RV+RFIAP ED AQRL KML + S A+ RP+ +QQ + G+ + PR+ H ++ L G+ E +E A+D LV ARLQQKLD+IE+ +C TT +
Sbjct: 53 EYPAVVEKKTVSSQLRVMFLVGLEGTGHHYFLNVFDDACTTAAVPCANACPIAKALYPSLATPSTKQDYERARRELRRELENLAAYPAEFMTEGQAAIAQFVTCRSKSGMMSFPNFNGNDKALQYVDFRLLAEEAERAGVDVRFVYLARSARSILVSDTQHNHYGGTFMRESRALINNAAVVESTFQELGPGFATCFRYESMSDPEQTHRVARFIAPDEDTAQRLEGKMLENVKPGS--------ASPRPSNPTMEWTKQQGRLPNGAMNYHP--KDPRYGPHRAKYDGNQFLNAGTAEQAAELEAAAAXXXXXXXTTIEAERAKEEARDRDSWDLSFELVVARLQQKLDKIEEIVCTTTAT 404
BLAST of mRNA_P-fluviatile_contig13.1646.1 vs. uniprot
Match: D7FMV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV4_ECTSI) HSP 1 Score: 290 bits (741), Expect = 2.930e-85 Identity = 144/239 (60.25%), Postives = 181/239 (75.73%), Query Frame = 1
Query: 634 YLGLVTKTAVSSRMRLVFLVGLEGTGHHYLADVLDDTCQTASVLCPKVCQMAEALYPDLALPKSATDYELARKKLRHEMDTLAAYAREKIAEGKVAIASFGLCRFEA-GMMSYPNFKGPDKPLQYVDFRLLAEEAERAGVDIRFVYLSRSAKSILISSIQHKHYAETFMKEARALLNNAAVVESTFRELGPGFATCFRYEDIADPDQADRVSRFIAPTEDVAQRLGQKMLAKISSRSPP 1347
Y +V K AVSSRMR+VFLVGLEGTGHHY+ADVL+D C+ V CPK+C MA+ LYP+L+LPKS Y ARK+LR EM+ LAA+ E +AEG+ + SFG CRF+ GMMSYPNF G +K LQYVDFRL+AEEAERAGVD+RFVYL+RSA IL S H +Y +F++E+R LLNN AVV STF+EL P F TCFRY ++ADP QA RV+ F+AP A++L ++L+ + +SPP
Sbjct: 95 YPVVVEKKAVSSRMRVVFLVGLEGTGHHYMADVLEDVCKKDKVRCPKLCVMAKVLYPELSLPKSRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSGHHNYGGSFIRESRILLNNLAVVHSTFQELDPSFTTCFRYGEMADPAQAARVAGFLAPNNHTAEKLADQILSHVKIKSPP 333
BLAST of mRNA_P-fluviatile_contig13.1646.1 vs. uniprot
Match: A0A6H5KIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA1_9PHAE) HSP 1 Score: 252 bits (644), Expect = 4.160e-73 Identity = 140/301 (46.51%), Postives = 182/301 (60.47%), Query Frame = 1
Query: 721 LADVLDDTCQTASVLCPKVCQMAEALYPDLALPKSATDYELARKKLRHEMDTLAAYAREKIAEGKVAIASFGLCRFEA-GMMSYPNFKGPDKPLQYVDFRLLAEEAERAGVDIRFVYLSRSAKSILISSIQHKHYAETFMKEARALLNNAAVVESTFRELGPGFATCFRYEDIADPDQADRVSRFIAPTEDVAQRLGQKMLAKISSRSPPAHVMVAAAQRPATNIHRKQQQQRFMKGGSRQRYTGGAGPRHTAHHEHLSRGLRGGSPEPWNSEGGSSAAKDLVAARLQQKLDRIEKDMCVT 1620
+ADVL+D C+ V CPK+C MA+ LYP+L+LP+S Y ARK+LR EM+ LAA+ E +AEG+ + SFG CRF+ GMMSYPNF G +K LQYVDFRL+AEEAERAGVD+RFVYL+RSA IL S H +Y +F++E+R LLNN AVV STF+EL P F TCFRY ++ADP QA RV+ F+AP A++L +ML+ + +SPP +Q + +GG R R+ P K V RLQQ+LD +EKD+C T
Sbjct: 1 MADVLEDVCKKDKVRCPKLCVMAKVLYPELSLPESRNAYWDARKRLREEMEKLAAFPEESLAEGESTVVSFGACRFQGTGMMSYPNFNGDEKALQYVDFRLVAEEAERAGVDMRFVYLARSAADILTSDSVHHNYGGSFIRESRILLNNLAVVHSTFQELDPAFTTCFRYGEMADPAQAARVAGFLAPNNRTAEKLADQMLSHVKIKSPPE----------------SGNKQSWGEGGKRLRHPEDVDP-----------------------------PKAAVVTRLQQRLDMVEKDVCST 256
BLAST of mRNA_P-fluviatile_contig13.1646.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 127 bits (319), Expect = 3.610e-26 Identity = 63/107 (58.88%), Postives = 79/107 (73.83%), Query Frame = 1
Query: 2359 ALQQLYAVVLCSQASAAQVERDFCHCGLFSVGNHSREDEHWMEMVMFLKANYSCIPEYNDIPNMDSKDIRNRPPAKFSGTNDDLLKAEMAIDPLSSTMPP*EDDIGV 2679
AL+ + SQ SAA VERDF CGLF V N SR +E+W+EMVMFL AN+ IP+Y++IP++DSKDIR PAKF GT++DLL AEMA+DPL + PP EDD G+
Sbjct: 746 ALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAKFKGTDEDLLSAEMALDPLRNNTPPGEDDTGL 852
BLAST of mRNA_P-fluviatile_contig13.1646.1 vs. uniprot
Match: A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE) HSP 1 Score: 121 bits (304), Expect = 4.130e-25 Identity = 60/100 (60.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query: 2392 SQASAAQVERDFCHCGLFSVGNHSREDEHWMEMVMFLKANYSCIPEYNDIPNMDSKDIRNRPPAKFSGTNDDLLKAEMAIDPLSSTMPP*EDDIGVGDEG 2691
SQA AAQ+ERDF GL N +R DE+W+EMV+FLKAN+ CIP Y+DIPNMDSK IR PAKF GTN+ LL AEMA+DPL + PP IG +G
Sbjct: 412 SQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIRECLPAKFKGTNEYLLDAEMALDPLENKTPPNTSAIGDNGDG 511
BLAST of mRNA_P-fluviatile_contig13.1646.1 vs. uniprot
Match: A0A6H5JH94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH94_9PHAE) HSP 1 Score: 117 bits (292), Expect = 3.720e-24 Identity = 80/254 (31.50%), Postives = 129/254 (50.79%), Query Frame = 1
Query: 643 LVTKTAVSSRMRLVFLVGLEGTGHHYL----ADVLDDTCQTASVLCPKVCQMAEALYPDLALPKSATDYELARKKLRHEMDTLAAYAREKIAEGKVAIASFGLCRFEAGMMSYPNFKGPDKPLQYVDFRLLAEEAERAGVDIRFVYLSRSAKSILISSIQHKHY-------AET------FMKEARALLNNAAVVESTFRELGPGFATCFRYEDIADPDQADRVSRFIAPTEDVAQRLGQKML--AKISSRSPP 1347
++ KT VS RLVF+ GLEGTGHHY+ A + D P+ + +Y A K + + + ++ + ++AE ++S G F + SYP GP K +QY+D ++AE AE AG+D R +YL RSAK ++I++ H+ + ET F+K R L + AV+ S E+GP F C ++ + D +QA ++ FI+P +++A + ++ AK SSR+ P
Sbjct: 138 ILPKTHVSDVFRLVFVAGLEGTGHHYVMWANASLFGDNMNL-----PRRYGHGKEIYEYYAPLKMGQNVKQFTMSSHNAVENM-----RRLAEWAANLSSPGALEFFSIPCSYPVNSGPLKVMQYMDLGMIAETAEGAGIDFRVLYLRRSAKEVVIANTVHRKFHLLMGDDEETVGQERLFLKYMRVLFTDIAVLHSFLGEIGPEFVVCHDWDRLGDKEQASTIASFISPNDEIASLVESSLVQTAKKSSRTDP 381
BLAST of mRNA_P-fluviatile_contig13.1646.1 vs. uniprot
Match: A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE) HSP 1 Score: 108 bits (270), Expect = 7.470e-21 Identity = 57/96 (59.38%), Postives = 69/96 (71.88%), Query Frame = 1
Query: 2392 SQASAAQVERDFCHCGLFSVGNHSREDEHWMEMVMFLKANYSCIPEYNDIPNMDSKDIRNRPPAKFSGTNDDLLKAEMAIDPLSSTMPP*EDDIGV 2679
+QASAA VERDF CGLF V N SR DE+W+EMVMFLKAN++ N IP +D KDIR PAKF GT++D L AEMA+ PLS+ PP E +G+
Sbjct: 415 NQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRIN-IPQIDPKDIRKCLPAKFEGTDEDHLNAEMALYPLSNDAPPAEAGLGL 509
BLAST of mRNA_P-fluviatile_contig13.1646.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 103 bits (257), Expect = 5.450e-19 Identity = 47/67 (70.15%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 2392 SQASAAQVERDFCHCGLFSVGNHSREDEHWMEMVMFLKANYSCIPEYNDIPNMDSKDIRNRPPAKFS 2592
SQASAAQ+ERDF HCGLFS GN SR +E+W+EMVM LK NY IP+Y DIP++DSKDIR PAK+S
Sbjct: 517 SQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRKCLPAKYS 583
BLAST of mRNA_P-fluviatile_contig13.1646.1 vs. uniprot
Match: A0A813BJ34_SYMMI (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A813BJ34_SYMMI) HSP 1 Score: 93.2 bits (230), Expect = 1.040e-16 Identity = 62/199 (31.16%), Postives = 99/199 (49.75%), Query Frame = 1
Query: 646 VTKTAVSSRMRLVFLVGLEGTGHHYLADVLDDTCQTASVLCPKVCQMAEALYPDLALPKSATDYELARKKLRHEMDTLAAYAREKIAEG---KVAIASFGLCRFEAGMMSYPNFKGPDKPLQYVDFRLLAEEAERAGVDIRFVYLSRSAKSILISSIQHKHYAETFMKEARALLNNAAVVESTFRELGPGFATCFRYED 1233
VTK VSS +R VF GLEGTGHH+ ++L + S +++ L+ ++ E R+ L + L + ++ ++ V + G + +GMMSYPNF GPD+ +Q D LA+ AE AG+D+R V L+R S++ S + + Y + R + A++ L P + TC+ YED
Sbjct: 64 VTKKVVSSNVRFVFFAGLEGTGHHFWQELLRRLSISHSA------DLSQELFNRQHGSLFSSTDERGREDLAEHVVELMSETQKNLSSVPGCNVVALNVGGTTYPSGMMSYPNFGGPDRLIQNPDMFTLAKLAEAAGIDLRIVLLTRHPASLVRSELA-RSYEKDLTHAVRKVSMTMALLSEQLDLLDPAYVTCWTYED 255
BLAST of mRNA_P-fluviatile_contig13.1646.1 vs. uniprot
Match: A0A1Q9EVB9_SYMMI (Uncharacterized protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EVB9_SYMMI) HSP 1 Score: 93.2 bits (230), Expect = 8.600e-16 Identity = 62/199 (31.16%), Postives = 99/199 (49.75%), Query Frame = 1
Query: 646 VTKTAVSSRMRLVFLVGLEGTGHHYLADVLDDTCQTASVLCPKVCQMAEALYPDLALPKSATDYELARKKLRHEMDTLAAYAREKIAEG---KVAIASFGLCRFEAGMMSYPNFKGPDKPLQYVDFRLLAEEAERAGVDIRFVYLSRSAKSILISSIQHKHYAETFMKEARALLNNAAVVESTFRELGPGFATCFRYED 1233
VTK VSS +R VF GLEGTGHH+ ++L + S +++ L+ ++ E R+ L + L + ++ ++ V + G + +GMMSYPNF GPD+ +Q D LA+ AE AG+D+R V L+R S++ S + + Y + R + A++ L P + TC+ YED
Sbjct: 302 VTKKVVSSNVRFVFFAGLEGTGHHFWQELLRRLSISHSA------DLSQELFNRQHGSLFSSTDERGREDLAEHVVELMSETQKNLSSVPGCNVVALNVGGTTYPSGMMSYPNFGGPDRLIQNPDMFTLAKLAEAAGIDLRIVLLTRHPASLVRSELA-RSYEKDLTHAVRKVSMTMALLSEQLDLLDPAYVTCWTYED 493 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1646.1 >prot_P-fluviatile_contig13.1646.1 ID=prot_P-fluviatile_contig13.1646.1|Name=mRNA_P-fluviatile_contig13.1646.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=487bp MYPKMYKLSPLSLGHLLVAPRRRTVVVGLALALVLAFVGVYPDRPAIAWPback to top mRNA from alignment at P-fluviatile_contig13:360176..368022+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1646.1 ID=mRNA_P-fluviatile_contig13.1646.1|Name=mRNA_P-fluviatile_contig13.1646.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7847bp|location=Sequence derived from alignment at P-fluviatile_contig13:360176..368022+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:360176..368022+ >mRNA_P-fluviatile_contig13.1646.1 ID=mRNA_P-fluviatile_contig13.1646.1|Name=mRNA_P-fluviatile_contig13.1646.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2922bp|location=Sequence derived from alignment at P-fluviatile_contig13:360176..368022+ (Porterinema fluviatile SAG_2381)back to top |