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Homology
BLAST of mRNA_P-fluviatile_contig13.1642.1 vs. uniprot
Match: D7FNT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT9_ECTSI) HSP 1 Score: 261 bits (667), Expect = 3.490e-79 Identity = 140/200 (70.00%), Postives = 154/200 (77.00%), Query Frame = 3
Query: 795 DSPFSAALQEELRVAITYLAARLQREKPMTRAEFERFETAVAIIVEDALALQNLPMQGAPA--------ATSPEKPARRLVAARSPVPPPASGSSNTDDDFEVEGPQWDAKRVQYGLPMGVRNTYDIDDMEKMNPEEYQAALRDKVVRRAQSVRKTGSYGNIVSNEYLKFLGQNPTTGDEKFKANEKFVKGKGREDFSRY 1370
+SPFS +LQEELRVAI LAARLQREKPM+R EFERFE+AV +IVEDAL LQ LP +PA A +P RL +SPV P A FE EGP+WDA++VQYGLPMG RNTYDIDDMEKMNPEEYQAALR+KVV RAQSVRKTGSYGNIVSNEYLKFLG+NP TGDEKFK NE+FVK KGREDF Y
Sbjct: 6 ESPFSESLQEELRVAIKILAARLQREKPMSRQEFERFESAVGVIVEDALPLQKLPSPASPASXEAAXXXAAAPP----RLAVTQSPV-PNADSXXXXXXXFETEGPEWDAEKVQYGLPMGARNTYDIDDMEKMNPEEYQAALREKVVERAQSVRKTGSYGNIVSNEYLKFLGKNPKTGDEKFKKNEEFVKSKGREDFRSY 200
BLAST of mRNA_P-fluviatile_contig13.1642.1 vs. uniprot
Match: A0A836C7S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7S9_9STRA) HSP 1 Score: 122 bits (305), Expect = 2.650e-27 Identity = 91/240 (37.92%), Postives = 125/240 (52.08%), Query Frame = 3
Query: 666 SYAERLKEAQAAKAAAAAARGNNARPPLPSDPSTH---APASQTLPDS--PFSAALQEELRVAITYLAARLQREKPMTRAEFERFETAVAIIVEDALALQNLPMQGAPAATSPEKPARRLVAARSPVPPPASGSSNTDDDFEVEGPQWDAKRVQYGLPMGVRNTYDIDDMEKMNPEEYQAALRDKVVRRAQSVRKTGSYGNIVSNEYLKFLGQNPTTGDEKFKANEKFVKGKGREDFSRY 1370
SY ERLK AQ AKAA + A PP P+T A S+ L + PF+ +QE L+ AI L+ RL+ P+ R EF+RFE A+ I++DA+ + E EGP WDA + YG+P+GVRN+Y ID M+ M+P++YQAALR+KV++R RKTG+YGN +N YL FL ++PT D K +A + EDF+ Y
Sbjct: 41 SYMERLKAAQEAKAA----KKQAAAPPAAVAPATXXXVAAVSEPLSAAAAPFTDEMQEHLQTAINLLSRRLKSGVPLNRPEFDRFEEAIDAIIKDAVPHLAAAXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXEGMESEGPAWDASKG-YGMPVGVRNSYTIDGMDDMSPDDYQAALREKVLKRVTKARKTGNYGNRAANAYLSFLDKSPTW-DVKEEAEPE-------EDFTEY 264
BLAST of mRNA_P-fluviatile_contig13.1642.1 vs. uniprot
Match: A0A7S1UWT3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWT3_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 5.110e-7 Identity = 36/89 (40.45%), Postives = 48/89 (53.93%), Query Frame = 3
Query: 1065 DDFEVEGPQWDAKRVQYGLPMGVRNTYDIDDMEKMNPEEYQAALRDKVVRRAQSVRKTGSYGNIVSNEYLKFLGQNPTTGDEKFKANEK 1331
D EGP + G P G RNTY ID M++M+PEEY+ AL+ VV + + RK+G GN S Y+ L + TG K + EK
Sbjct: 151 DTSNDEGPAYTGTM---GQPAGTRNTYVIDGMDEMSPEEYRQALQQSVVAKQRERRKSGMAGNYGSLSYMNSLSNSGDTGSLKHEILEK 236
BLAST of mRNA_P-fluviatile_contig13.1642.1 vs. uniprot
Match: A0A7S0BY33_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BY33_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 3.740e-6 Identity = 32/81 (39.51%), Postives = 48/81 (59.26%), Query Frame = 3
Query: 1044 SGSSNTDDDFEVEGPQWDAKRVQYGLPMGVRNTYDIDDMEKMNPEEYQAALRDKVVRRAQSVRKTGSYGNIVSNEYLKFLG 1286
+G TD + EGP + K GL G +NTY I+ M++M+PEEY+ AL+ + R R+TG++GN+ S YL +G
Sbjct: 132 AGYGVTDMSLD-EGPAYTGKGGM-GLASGTKNTYVIEGMDEMSPEEYREALQGSISARQDKRRETGTFGNMSSENYLSAIG 210
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 265.8 |
| Seed ortholog evalue | 2e-68 |
| Seed eggNOG ortholog | 2880.D7FNT9 |
| EggNOG OGs | 2EA2C@1,2SGBW@2759 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-12_003400.1 |
| Exons | 4 |
| Model size | 2199 |
| Cds size | 720 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815541.3267498-UTR-P-fluviatile_contig13:316410..317236 | 1622815541.3267498-UTR-P-fluviatile_contig13:316410..317236 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 316411..317236 - |
| 1693562198.3295817-UTR-P-fluviatile_contig13:316410..317236 | 1693562198.3295817-UTR-P-fluviatile_contig13:316410..317236 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 316411..317236 - |
| 1622815541.3899312-UTR-P-fluviatile_contig13:319680..320333 | 1622815541.3899312-UTR-P-fluviatile_contig13:319680..320333 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 319681..320333 - |
| 1693562198.3764198-UTR-P-fluviatile_contig13:319680..320333 | 1693562198.3764198-UTR-P-fluviatile_contig13:319680..320333 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig13 319681..320333 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622815541.339196-CDS-P-fluviatile_contig13:317236..317360 | 1622815541.339196-CDS-P-fluviatile_contig13:317236..317360 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 317237..317360 - |
| 1693562198.3404062-CDS-P-fluviatile_contig13:317236..317360 | 1693562198.3404062-CDS-P-fluviatile_contig13:317236..317360 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 317237..317360 - |
| 1622815541.3516314-CDS-P-fluviatile_contig13:318295..318346 | 1622815541.3516314-CDS-P-fluviatile_contig13:318295..318346 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 318296..318346 - |
| 1693562198.3528035-CDS-P-fluviatile_contig13:318295..318346 | 1693562198.3528035-CDS-P-fluviatile_contig13:318295..318346 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 318296..318346 - |
| 1622815541.3623834-CDS-P-fluviatile_contig13:318684..318950 | 1622815541.3623834-CDS-P-fluviatile_contig13:318684..318950 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 318685..318950 - |
| 1693562198.3612487-CDS-P-fluviatile_contig13:318684..318950 | 1693562198.3612487-CDS-P-fluviatile_contig13:318684..318950 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 318685..318950 - |
| 1622815541.3775601-CDS-P-fluviatile_contig13:319401..319680 | 1622815541.3775601-CDS-P-fluviatile_contig13:319401..319680 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 319402..319680 - |
| 1693562198.3689084-CDS-P-fluviatile_contig13:319401..319680 | 1693562198.3689084-CDS-P-fluviatile_contig13:319401..319680 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig13 319402..319680 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1642.1 >prot_P-fluviatile_contig13.1642.1 ID=prot_P-fluviatile_contig13.1642.1|Name=mRNA_P-fluviatile_contig13.1642.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=240bp
MMMTSYAERLKEAQAAKAAAAAARGNNARPPLPSDPSTHAPASQTLPDSP FSAALQEELRVAITYLAARLQREKPMTRAEFERFETAVAIIVEDALALQN LPMQGAPAATSPEKPARRLVAARSPVPPPASGSSNTDDDFEVEGPQWDAK RVQYGLPMGVRNTYDIDDMEKMNPEEYQAALRDKVVRRAQSVRKTGSYGN IVSNEYLKFLGQNPTTGDEKFKANEKFVKGKGREDFSRY* back to topmRNA from alignment at P-fluviatile_contig13:316411..320333- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig13.1642.1 ID=mRNA_P-fluviatile_contig13.1642.1|Name=mRNA_P-fluviatile_contig13.1642.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3923bp|location=Sequence derived from alignment at P-fluviatile_contig13:316411..320333- (Porterinema fluviatile SAG_2381) GGAGGGACTTGACGACTACGGCGAGTGAGGCTGAATCCTCATCGGCATGA
TGAGGATTTTTAACTCAGCCGCTCTGGCTACTGGTAAGATGGTTTTCAAG
CGGGACCCTGTACGCCGGGCCACACACATGTATTGCACACGTTAGTCAAC
TTTCCCTCCGAGTTCAACTGCACCCAGCAGACACCCAGTGCCGACCACCG
CAGGCAACAGCAGCACCCACGGGTGCCCAAGGATTTGGTTAAGCGGGAAA
AGCGTAAGAAGTGCCTCGGATTCCTGCGACGAATGGATGTTCGTGTGCCT
CTCGAGGAGGAAAAGTCTACTCCCCTTTGGAACAGGGTGTAGTTTACTGC
CACATCCGGATTTTTCAGGGTCTGAAACAGCGAACTCTGCCCACGCTTCA
AATGAGTGACCGCGCCCTACGTTCCCAATGACCTTCCTGCTGCCCCGCTT
CCTTCTCCCCTTTCATACTCGCTCATTGTACGTTGTTGCGGCGGCGGTGT
CGATGCAACAACCCATCAACCCATCCAGCAGCATTGCTACTGCCTTGCGC
CGACGGCTTCACTTCTCCGGCGGTCGTCTACCTCGCCGCCAGACCTGCCG
ATGCCGCCGCCCACGCAACAACCCCTGCAGGAAGAACAGTCCAGGCCCCA
TTGATGATGATGACCTCGTACGCAGAGAGACTGAAGGAGGCACAAGCCGC
CAAGGCAGCAGCAGCAGCAGCCAGAGGCAACAACGCACGTCCCCCCCTGC
CTTCGGACCCTTCAACCCACGCGCCCGCGAGCCAGACTTTGCCGGACTCC
CCCTTCTCGGCGGCTCTACAAGAAGAACTCCGGGTCGCTATTACTTACCT
CGCGGCAAGGTTGCAACGGGAAAAGCCTATGACCCGCGCCGAGTTTGAGA
GGTTTGAGACTGCCGTGGCCATCATCGTCGAGGTACGCACAGTGCCCTCT
GGGTTGCCGCGTGCGCAGTAGGTACTTCAGTTTGCGAGTCGCTGGGTGCC
TCATGCAGTTGTTTCATTTGATGAGAAGCGCCATGTTGGCGATTTTGATT
TCTCTTTTGCGTTTGTGCTGGTCATCGCTGTGGGTACTAAATTACGCCCG
AACGCGCGAGGTCTGCCACAACACGTGGATCAGTGTCATGGTGGGAGGCA
CCGGGGACGGCAAGCAATGGCCATCCGGAGACGGTAAGTGGGGAGGGCAA
TTCCACATCCGCAACAGCTTCCGCGTTTCTATTTTTGAGCATTCAAGGCA
CACGAAATGCTCCACTGGTCGAGGCGCACCGATACGTTTGGATCCTTCTC
TTTGTTAGTGTCCTCCCACCCACTGCTGACCGCAAGCGCTACTCCGTTTT
TGCTTTGATATTTGTTTCTTGCATCCTGTAAAGGATGCGCTTGCACTGCA
GAATCTGCCGATGCAGGGTGCTCCTGCAGCAACAAGCCCGGAGAAGCCCG
CCCGGCGACTGGTGGCAGCGCGATCCCCCGTGCCCCCGCCTGCCAGCGGG
AGCAGCAACACTGATGACGACTTCGAAGTGGAGGGGCCGCAATGGGACGC
CAAGAGAGTGCAATACGGTCTCCCCATGGGAGTGAGGAACACGTACGACA
TCGATGACATGGAAAAAATGAACCCGGAAGAGTACCAGGCTGCCCTCAGG
TGAGAATCCGGAGCACTTTTATGAGTACGAATTCTCCGAGCCAGACGGGT
GGAGTTGTTGAGCGCTTTCAAAGAGTAGAGGATGATCGCCATGCTTCACT
CAGGTATGCGCGTCGCGAGCTTTCGATGAGCAAACTGATTCGGTATTCTC
CGTGGAGGCATGTGCACGTTCGCGTCTGCGTACTTTTGTTGGCACGTGCG
CTGTTGAAACGCAATCCGTCAATCTTCCAAGCTGCTGTGCATGGTGAGCC
ACCAGCAAGTCGTAGAATGCAATTCCTTCCGTGGGGGCTGTGATAGCCCT
TGCCCTCCCATCCTTGGCTTCTGCTTTACCCATACAGGGACAAGGTCGTG
AGGAGAGCGCAATCCGTTCGGAAGACTGGCTCGTACGGGTGAGTCGAATA
TATTTTCTGTGAAATTTGGCGTATGAAGGTGTATGCAGTTTGCTGAGCAA
CGAGCGAGACGGACGCCGGTTGACACAGGTTCCAGGCTTGGCGTACGTCG
TGCTGCACATTCAGCCGCCACAGCCACAGCCACGAGCCATATGACGTTTG
TGTTTCCAAATGTAGGTAGAACCTTGCCTGGCACTTTTCTGTCTCAATGT
CTGCGGTCAGATCGTTTTGGGTCAGGTAGGCTGCCGGCTTTGGGACGCTT
CCGTCGACTCGTGCCTTCGTGGTTGCCAGCAAAGGACAAAGGAGTCAGGT
TTGCTGATATGTGCACCACTCACCTCCTGAGGATCGTTCTGCGGTTCTTA
CTTTATGTGTGTTCATATTTCTCGGAGACGTACCCGTCCATCCAAAAGAG
ACACAGCATAATGAAGGTCTCAAATCAAGCGGTTTCTCACCGAGGTCTCC
CGGAATCGGTCTCAGCTTCGGCTCACTGTCAGTTCGATGGATTTTTGGTT
GCGCCACTGCCGTTACACGAGAATGCGCTAGCTAGAAAACAACGACAAAG
CCTTTTCGATACGTGAAGCTTCCCCCGGCGGACCACTGTCCGCGGTTGTT
GTGGTTTGTACGTGGTGCACGCGAGTTGGTCGAGAGTAGCTCGAACGCGC
TGGCAGCGTGCTTCGTGCTTGAATACCTGACTTCCCATTTTGACAACGCC
GACCACCTGATTCGAATTCCCAAAAACGTAGAACTGCTCACAGGTACTGT
TTGGAGGTGCAGTGCTCACAGGTACGATGTTCTCCCCCTCCACACACCCC
GCCCATGGTCATCGAGTGTTGAAAGTGTGTCCTCGTGTCTCATCGGTTCT
GGCCTCCTTCTTTCGTTGCCTTTCGTGCTTCCTTTCGCTCCTTCTCCTGT
GGTACTCTCGTTTCTTTTTGCAGAAACATCGTTTCCAACGAGTATCTCAA
GTTCTTGGGCCAAAACCCCACGACGGGCGACGAGAAATTCAAGGCCAATG
AGAAGTTCGTCAAAGGCAAAGGCCGAGAAGACTTCAGCCGGTACTGATGT
GTGTGCAATACGGCCTATGCCAGCTGACTGGGGTTACTCGAAAATATGTC
GAACGACAGTGGTTTACACGAACGGGCAATGAGCAGGAGCGGCAGCAGGG
TACCTCACGAAGCATGGGTGAAGTTCTGTTGCTGCTGTTGCGAAGGACAC
CATCTTATCAAACAATGATAGCAAGATTAATAAGATTAATAGCTGCTGCC
CGCTCTTTTTGGTTTTTCGCATGTCCTTGTCAGGTTTGTTTTTTTGTCGG
GTGTTAAAGCAACTCGAGCCAAGCTGTATCTGAGGGCGCGAAAACTGGTG
TACCATCAAAAATGGTGCTGACTGCTTGGTTGGTTAATTGGAGTCAGGCC
TGGTGTTACCAGGACATGGCAAGGAATTCTTGCGAAGCCGTTCAAGGGGT
TCAGTGTCTGCTGCAGCTACTCCTTGTCGATCTGTGTCTGCTGCCGGTAA
AAGAAAAAAAAGACAGTAGTCTGATGTTGCTTGTGCTCAAGGTTTCTTGG
CCCCGGCCGATTTTTCGAAGCCCACAGAAGCTACGAATGCGAGCTCACGG
CGGTGCCTTTGCACATGCCGGCCAAGAGTCCCCGCAGTCGTTTTTGGTGG
AAGCCTGCGGCGTGCGCGGATAAGACGATTCTGGATGCCCACACTCGGAT
CGAATCAAGGCCCACCGCACGCTTCGTCTTGTGAGACATTCTCCACAACG
GAGAAAGCCACGCGCTCATATGGATGCAATCCGCGCTGGCCCGCTTTCTC
TCTCGTGAATTGAACGACGCGGGGATCCCTCGCGGATGCAACGAACGCAC
GCGATTAAGAAAAATAAAAGCGC back to topCoding sequence (CDS) from alignment at P-fluviatile_contig13:316411..320333- >mRNA_P-fluviatile_contig13.1642.1 ID=mRNA_P-fluviatile_contig13.1642.1|Name=mRNA_P-fluviatile_contig13.1642.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1440bp|location=Sequence derived from alignment at P-fluviatile_contig13:316411..320333- (Porterinema fluviatile SAG_2381) ATGATGATGACCTCGTACGCAGAGAGACTGAAGGAGGCACAAGCCGCCAA GGCAGCAGCAGCAGCAGCCAGAGGCAACAACGCACGTCCCCCCCTGCCTT CGGACCCTTCAACCCACGCGCCCGCGAGCCAGACTTTGCCGGACTCCCCC TTCTCGGCGGCTCTACAAGAAGAACTCCGGGTCGCTATTACTTACCTCGC GGCAAGGTTGCAACGGGAAAAGCCTATGACCCGCGCCGAGTTTGAGAGGT TTGAGACTGCCGTGGCCATCATCGTCGAGATGATGATGACCTCGTACGCA GAGAGACTGAAGGAGGCACAAGCCGCCAAGGCAGCAGCAGCAGCAGCCAG AGGCAACAACGCACGTCCCCCCCTGCCTTCGGACCCTTCAACCCACGCGC CCGCGAGCCAGACTTTGCCGGACTCCCCCTTCTCGGCGGCTCTACAAGAA GAACTCCGGGTCGCTATTACTTACCTCGCGGCAAGGTTGCAACGGGAAAA GCCTATGACCCGCGCCGAGTTTGAGAGGTTTGAGACTGCCGTGGCCATCA TCGTCGAGGATGCGCTTGCACTGCAGAATCTGCCGATGCAGGGTGCTCCT GCAGCAACAAGCCCGGAGAAGCCCGCCCGGCGACTGGTGGCAGCGCGATC CCCCGTGCCCCCGCCTGCCAGCGGGAGCAGCAACACTGATGACGACTTCG AAGTGGAGGGGCCGCAATGGGACGCCAAGAGAGTGCAATACGGTCTCCCC ATGGGAGTGAGGAACACGTACGACATCGATGACATGGAAAAAATGAACCC GGAAGAGTACCAGGCTGCCCTCAGGATGCGCTTGCACTGCAGAATCTGCC GATGCAGGGTGCTCCTGCAGCAACAAGCCCGGAGAAGCCCGCCCGGCGAC TGGTGGCAGCGCGATCCCCCGTGCCCCCGCCTGCCAGCGGGAGCAGCAAC ACTGATGACGACTTCGAAGTGGAGGGGCCGCAATGGGACGCCAAGAGAGT GCAATACGGTCTCCCCATGGGAGTGAGGAACACGTACGACATCGATGACA TGGAAAAAATGAACCCGGAAGAGTACCAGGCTGCCCTCAGGGACAAGGTC GTGAGGAGAGCGCAATCCGTTCGGAAGACTGGCTCGTACGGGGACAAGGT CGTGAGGAGAGCGCAATCCGTTCGGAAGACTGGCTCGTACGGAAACATCG TTTCCAACGAGTATCTCAAGTTCTTGGGCCAAAACCCCACGACGGGCGAC GAGAAATTCAAGGCCAATGAGAAGTTCGTCAAAGGCAAAGGCCGAGAAGA CTTCAGCCGGTACTGAAAACATCGTTTCCAACGAGTATCTCAAGTTCTTG GGCCAAAACCCCACGACGGGCGACGAGAAATTCAAGGCCAATGAGAAGTT CGTCAAAGGCAAAGGCCGAGAAGACTTCAGCCGGTACTGA back to top
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