mRNA_P-fluviatile_contig13.1636.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1636.1 vs. uniprot
Match: D7FNT6_ECTSI (Derlin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT6_ECTSI) HSP 1 Score: 419 bits (1078), Expect = 1.200e-144 Identity = 214/288 (74.31%), Postives = 244/288 (84.72%), Query Frame = 3
Query: 195 QKQTKAMPIGFVNGGGGNSPEELFRSIPPVSKVLIVGMVGSMLSLVVGLFTPYEFALSWPLVWKKFHIWRLFTAGVFPGPPGYGALMSIFSIGMFSIRYEQDGFNMGGGGGSADYAYMLLFGFVFIEASLLLLFYQPYLIFTEALRFYICYVWSRKNPGMSVSFWGIQINALYVPWAMVAMGVVLGASVFMALLGIAVGHLFYFLVDVLPDLHDIDLLKTPQIFVDMLGWGREGSGVTMQRPGGAGAGA-----AGMPAPGSAQPLRGFPRPGGGRADWGTGRTLGSS 1043
+++ K MP+G NG GG+SPEELFRSIPPVSKVLIVGMVG++LS+V+G+ +PY++ALSWPLVW KFH+WRLFT+G+FPG P Y LM + S+GMFSIRYE+DGF+MGGGGGSADYAYMLLFGFV IE SLLLLFYQP++IFT A+ FYICYVWSRKNPGMSVSFWGI INALYVPW MVA+ VVLG S+FMALLGIAVGHLFYFLVDVLPDLHDIDLL+TPQ V+MLGWG EGSGVTMQ G AGMPAPG+ +P R PR GGG + WGTGRTLGSS
Sbjct: 13 RQKKKNMPLGVFNGSGGSSPEELFRSIPPVSKVLIVGMVGTILSVVLGVCSPYQYALSWPLVWNKFHLWRLFTSGMFPGTPSYETLMLMISMGMFSIRYEKDGFSMGGGGGSADYAYMLLFGFVGIETSLLLLFYQPFMIFTTAIMFYICYVWSRKNPGMSVSFWGIIINALYVPWVMVALRVVLGHSIFMALLGIAVGHLFYFLVDVLPDLHDIDLLQTPQFLVNMLGWGHEGSGVTMQAGGXXXXXXXXXXXAGMPAPGAVRPPRDIPRTGGG-SGWGTGRTLGSS 299
BLAST of mRNA_P-fluviatile_contig13.1636.1 vs. uniprot
Match: A0A6H5KW67_9PHAE (Derlin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW67_9PHAE) HSP 1 Score: 290 bits (743), Expect = 2.660e-95 Identity = 153/191 (80.10%), Postives = 167/191 (87.43%), Query Frame = 3
Query: 486 RYEQDGFNMGGGGGSADYAYMLLFGFVFIEASLLLLFYQPYLIFTEALRFYICYVWSRKNPGMSVSFWGIQINALYVPWAMVAMGVVLGASVFMALLGIAVGHLFYFLVDVLPDLHDIDLLKTPQIFVDMLGWGREGSGVTMQRPGG-----AGAGAAGMPAPGSAQPLRGFPRPGGGRADWGTGRTLGSS 1043
RYE+DGF+MGGGGGSADYAYMLLFGFV IEASLLLLFYQP++IFTEA+ FYICYVWSRKNPGMSVSFWGI INALYVPW M+AM V +GAS+FMALLGIAVGHLFYFLVDVLPDLH+IDLL+TPQ V+MLGWGREGSGVTMQ GG A AGAAG+PAPG +P R PR GGG + WGTGRTLGSS
Sbjct: 10 RYEKDGFSMGGGGGSADYAYMLLFGFVCIEASLLLLFYQPFMIFTEAIMFYICYVWSRKNPGMSVSFWGIHINALYVPWVMIAMRVAIGASIFMALLGIAVGHLFYFLVDVLPDLHEIDLLQTPQFLVNMLGWGREGSGVTMQAGGGGAAAGARAGAAGVPAPGVVRPPRDIPRTGGG-SGWGTGRTLGSS 199
BLAST of mRNA_P-fluviatile_contig13.1636.1 vs. uniprot
Match: A0A835YYA5_9STRA (Derlin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYA5_9STRA) HSP 1 Score: 239 bits (610), Expect = 3.080e-74 Identity = 139/275 (50.55%), Postives = 173/275 (62.91%), Query Frame = 3
Query: 219 IGFVNGGGGNSPEELFRSIPPVSKVLIVGMVGSMLSLVVGLFTPYEFALSWPLVWKKFHIWRLFTAGVFPGPPGYGALMSIFSIGMFSIRYEQDGFNMGGGGGSADYAYMLLFGFVFIEASLLLLFYQPYLIFTEALRFYICYVWSRKNPGMSVSFWGIQINALYVPWAMVAMGVVLGASVFMALLGIAVGHLFYFLVDVLPDLHDIDLLKTPQIFVDMLGWGREGSGVTMQRPGGAGAGAAGMPAPGSAQPLRGFPRPGGGRADWGTG-RTLGS 1040
IG V G SPEE F+S+PPVSKVLI +VGS + +++G+ Y AL W + KF IWRL+T VF G P + LM++ G +SIRYE+D F+ GGGGGSADYA+ML FG + L F P+L + L F I YVWSRK P + SFWGI + ++YVPW MVA ++ GAS F LLGI VGHL+YFLVDV+PD D+L TP D+ G+G +GV QR PAPG A P RGFPRPGGG WG+G R LG+
Sbjct: 7 IGAVGAAG--SPEEWFKSLPPVSKVLITSLVGSTVLVMLGVIDAYNLALLWSPLRHKFEIWRLYTNAVFLGAPSFPFLMNLMIFGQYSIRYEKDAFDTGGGGGSADYAWMLAFGMAVLSGLSLAFFVVPFL--SIPLMFMIIYVWSRKVPDVPTSFWGITVQSVYVPWVMVAFNLLTGASAFNPLLGIGVGHLYYFLVDVVPDQFGKDVLTTPAFLTDLFGYGGLNTGV--QR----------FPAPGHAAPPRGFPRPGGGHT-WGSGGRPLGT 264
BLAST of mRNA_P-fluviatile_contig13.1636.1 vs. uniprot
Match: A0A7S2XX42_9STRA (Derlin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX42_9STRA) HSP 1 Score: 181 bits (458), Expect = 2.100e-51 Identity = 110/280 (39.29%), Postives = 166/280 (59.29%), Query Frame = 3
Query: 219 IGFVNGGGGNSPEELFRSIPPVSKVLIVGMVGSMLSLVVGLFTPYEFALSWPLVWKKFHIWRLFTAGVFPGPPGYGALMSIFSIGMFSIRYEQDG-FNMGGGGGSADYAYMLLFGFVFIEASLLLLFYQPYLIFTEALRFYICYVWSRKNPGMSVSF-WGIQINALYVPWAMVAMGVVLGASVFMALLGIAVGHLFYFLVDVLPDLHDIDLLKTPQIFVDMLGWGRE---GSGVTMQRPGGAGAGAAGMPAPGSAQPLRGFPRPGGGRADWGTGRTLGSS 1043
IG V GG SP++ + S+P ++KV + + L++ G+ L++PL+WKKF WRL T G G+G L++ + + +S +YE G FN GGGGG +DYA+M++FG V + ++ ++ + L F++ YVWSR+ P ++VSF +G++I ++Y PWA VA ++LG S FMALLGIAVGHL+YFL +++PD +D ++LKTP + G+G + QR G+ G G PA S FP PGG WG G LG++
Sbjct: 4 IGRVGQGG--SPQDWYNSVPFITKVWLTSTLAVTLAVNFGILPAGHLFLNFPLIWKKFQFWRLLTNFTCMGKLGFGTLITFYMLYSYSEKYETGGCFNTGGGGGVSDYAFMMMFGMVVMN---IIGYFMNTPFMAQPLVFFVMYVWSRRFPDLTVSFMFGVKIQSIYAPWAYVAFQILLGNSPFMALLGIAVGHLYYFLAEIVPDQYDFEILKTPVFMIHYFGYGAYHPVNTAPAAQR--GSVNGTGGQPANSS------FPMPGG--RQWGQGHVLGTN 268
BLAST of mRNA_P-fluviatile_contig13.1636.1 vs. uniprot
Match: A0A6H5KUK6_9PHAE (Derlin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUK6_9PHAE) HSP 1 Score: 171 bits (433), Expect = 5.530e-49 Identity = 76/94 (80.85%), Postives = 88/94 (93.62%), Query Frame = 3
Query: 213 MPIGFVNGGGGNSPEELFRSIPPVSKVLIVGMVGSMLSLVVGLFTPYEFALSWPLVWKKFHIWRLFTAGVFPGPPGYGALMSIFSIGMFSIRYE 494
MP+GFVNGG GNSPEELFRSIPPVSKVLI+GMVG+M S+V+G+ +PYE+ALSWPLVW KFH+WRLFT+G+FPG PGYGALMSIFSIGMFSIR+
Sbjct: 1 MPLGFVNGGSGNSPEELFRSIPPVSKVLILGMVGTMFSIVLGVCSPYEYALSWPLVWNKFHLWRLFTSGIFPGKPGYGALMSIFSIGMFSIRWS 94
BLAST of mRNA_P-fluviatile_contig13.1636.1 vs. uniprot
Match: A0A7S0SWB6_9STRA (Derlin n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWB6_9STRA) HSP 1 Score: 169 bits (429), Expect = 4.720e-47 Identity = 100/274 (36.50%), Postives = 166/274 (60.58%), Query Frame = 3
Query: 237 GGGNSPEELFRSIPPVSKVLIVG--MVGSMLSLVVGLFTPYEFALSWPLVWKKFHIWRLFTAGVFPGPPGYGALMSIFSIGMFSIRYEQDGFNMGGGGGSADYAYMLLFGFVFIEASLLLLFYQPYLIFTEALRFYICYVWSRKNPGMSVSFWGIQINALYVPWAMVAMGVVLGASVFMALLGIAVGHLFYFLVDVLPDLHDIDLLKTPQIFVDMLGW--GREGSGVT-MQRPGGAGAGAAGMPAPGSAQPLRGFPRPGGGRADWGTGRTLGSS 1043
G G+S ++ + +IP V+KVLI ++G +L+ L P + L W +W KFHIWRLFT VF G + LM + S++YE + +N GGGG SADY Y++++ V + L++ +Y ++I ++ L + I YVWSR+ V+ +G + LY+PW + + +++G S+ L+GIAVGH +YFL++V+P ++++DL++TP+ +D++ + GR + ++ + P A A AG P G+ GFP G G +WG GR LG++
Sbjct: 9 GQGDSIQDWYNNIPFVTKVLITSTVVIGGLLTF--QLIPPQDLILDWRFIWHKFHIWRLFTPFVFAGSFSFNFLMHTVVLYQNSLKYENNPYNTGGGGSSADYLYLIIYSIVLL---LVIAYYMNFMILSDPLMYVIVYVWSRRESESVVNMYGFKFKGLYLPWIYIGISMLMGNSIVPPLIGIAVGHSYYFLIEVMPTIYNVDLIRTPKFCIDIITYSTGRTPNVLSNIPIPNLAAAPNAGAPVRGN-----GFPNLGTGH-NWGRGRVLGAN 271
BLAST of mRNA_P-fluviatile_contig13.1636.1 vs. uniprot
Match: A0A8J2WZQ4_9STRA (Derlin n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZQ4_9STRA) HSP 1 Score: 154 bits (390), Expect = 2.520e-41 Identity = 80/222 (36.04%), Postives = 128/222 (57.66%), Query Frame = 3
Query: 219 IGFVNGGGGNSPEELFRSIPPVSKVLIVGMVGSMLSLVVGLFTPYEFALSWPLVWKKFHIWRLFTAGVFPGPPGYGALMSIFSIGMFSIRYEQDGFNMGGGGGSADYAYMLLFGFVFI-EASLLLLFYQPYLIFTEALRFYICYVWSRKNPGMSVSFWGIQINALYVPWAMVAMGVVLGASVFMALLGIAVGHLFYFLVDVLPDLHDIDLLKTPQIFVDMLG 881
+G V G N ++ S+PPV++V V G+ + GL PY SWP V +F +WRL T F G + L++++ + +S YE +N GGGG +ADY +M+ G + + S + P +A+ + + YVWSR+NP VS +G + A+ +PWA+ A +V+G S+ + L+GI VGHL+YF ++VLPD + +D++KTP+ +D G
Sbjct: 7 LGRVGQGPANPVKDWLESLPPVTRVWFVASFGTTCLISFGLVDPYRLLWSWPAVRHRFEVWRLITPYFFFGGFSFPFLINLYLLQQYSKGYEISPYNTGGGGDTADYIWMMFLGALMLCGVSEFMGQVAP----AQAMLYLVLYVWSRRNPTQQVSLYGFPVQAIMLPWALCAFNMVIGNSLLLPLMGIGVGHLYYFAIEVLPDAYGVDIVKTPRALIDACG 224
BLAST of mRNA_P-fluviatile_contig13.1636.1 vs. uniprot
Match: A0A482RVM1_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVM1_9ARCH) HSP 1 Score: 152 bits (383), Expect = 1.380e-40 Identity = 80/212 (37.74%), Postives = 123/212 (58.02%), Query Frame = 3
Query: 243 GNSPEELFRSIPPVSKVLIVGMVGSMLSLVVGLFTPYEFALSWPLVWKKFHIWRLFTAGVFPGPPGYGALMSIFSIGMFSIRYEQDGFNMGGGGGSADYAYMLLFGFVFIEASLLLLFYQPYLIFTEALRFYICYVWSRKNPGMSVSFWGIQINALYVPWAMVAMGVVLGASVFMALLGIAVGHLFYFLVDVLPDLHDIDLLKTPQIFVDML 878
G++ + F S+P ++KV +V + + L + L WP V KFH WRLFT VF GP + + + RYE + FN G GG SAD+ ++LL + + L+L + + +E L + I YVWSR+ P ++ WG + ALY+PW +A+ +V+G ++ L+G+AVGHL+YFLV VLP H +DL+KTP+ VD++
Sbjct: 5 GDTLQGWFSSVPLITKVFLVSTLITGAGLSFKMLDGGSLVLLWPYVQNKFHFWRLFTCFVFAGPFSFNFALHTLVLYENCKRYESNPFNTGAGGNSADFLWLLL---IAMTVLLVLAYIFDMYVLSEPLLYVIMYVWSRREPDAMLNIWGFRFKALYLPWVYIAIRMVMGGAITEPLIGVAVGHLYYFLVQVLPATHGVDLIKTPKFCVDIV 213
BLAST of mRNA_P-fluviatile_contig13.1636.1 vs. uniprot
Match: A0A7S2SNX6_9STRA (Derlin n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNX6_9STRA) HSP 1 Score: 152 bits (383), Expect = 2.510e-40 Identity = 79/223 (35.43%), Postives = 131/223 (58.74%), Query Frame = 3
Query: 213 MPIGFVNGGGGNSPEELFRSIPPVSKVLIVGMVGSMLSLVVGLFTPYEFALSWPLVWKKFHIWRLFTAGVFPGPPGYGALMSIFSIGMFSIRYEQDGFNMGGGGGSADYAYMLLFGFVFIEASLLLLFYQPYLIFTEALRFYICYVWSRKNPGMSVSFWGIQINALYVPWAMVAMGVVLGASVFMALLGIAVGHLFYFLVDVLPDLHDIDLLKTPQIFVDMLG 881
M G G GN+P+E F S+PP+++ L+V ++ + + G+ +P++ L W VW+ F IWRL + VF G + L++++ + ++ RYE FN G GG SAD+A+ML G + + F P++ + + F I YVW+RKNP S + + A Y+PWAM+A +++G +++ L+GIA GH++YFL P D++KTP +++LG
Sbjct: 1 MMRGMGRVGDGNTPQEWFYSLPPITRSLLVAVLATTAACSFGIVSPFQLHLDWTRVWRGFEIWRLASNFVFFGTFSFPFLINLYLLVQYASRYEVSPFNTGAGGSSADFAWMLTIGCSLLAIASYF-FGLPFM--GQPMSFMIMYVWTRKNPDEMTSIFFFKFQAFYLPWAMLAFNLLIGNDIYLPLMGIAAGHVYYFLHYTAPAELGRDIIKTPTFMIELLG 220
BLAST of mRNA_P-fluviatile_contig13.1636.1 vs. uniprot
Match: A0A0P0YV31_9STRA (Derlin n=1 Tax=Nitzschia sp. IriIs04 TaxID=1444690 RepID=A0A0P0YV31_9STRA) HSP 1 Score: 149 bits (376), Expect = 3.510e-39 Identity = 85/230 (36.96%), Postives = 131/230 (56.96%), Query Frame = 3
Query: 213 MPIGFVNG-GGGNSPEELFRSIPPVSKVLIVGMVGSMLSLVVGLFTPYEFALSWPLVWKKFHIWRLFTAGVFPGPPGYGALMSIFSIGMFSIRYEQDG-FNMGGGGGSADYAYMLLFGF--VFIEASLLLLFYQPYLIFTEALRFYICYVWSRKNPGMSVSFWGIQINALYVPWAMVAMGVVLGASVFMALLGIAVGHLFYFLVDVLPDLHDIDLLKTPQIFVDMLGWGR 890
MP+ V G G P++ F+S+P +++ V L+ G+ PY SW + + +WR T F GP + LM ++ + FS +YE G FN G GGG+ADYA+ LL G V + LLL F + +F L +Y+ Y+WS++NP + WGI + A+Y+P+A +A V G S + G++VGH++YFLVDV+P ++ DLL+TPQ ++ G G+
Sbjct: 1 MPVQNVAGVGDAAGPDQWFKSLPIITQYWFGATVVVTLAANFGIINPYLLFWSWNDIKSRLELWRFLTPFCFAGPFDFSTLMVVYLLVQFSKQYEVGGPFNTGAGGGTADYAFCLLLGAGSVLVTYPLLLGFVRLAPVFCRTLIYYVLYIWSKRNPTAQANIWGIPMAAIYLPFAYLAFNVFTGNSYMDLIHGMSVGHVYYFLVDVVPMVYGKDLLRTPQFLINYFGTGQ 230 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1636.1 >prot_P-fluviatile_contig13.1636.1 ID=prot_P-fluviatile_contig13.1636.1|Name=mRNA_P-fluviatile_contig13.1636.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=278bp MPIGFVNGGGGNSPEELFRSIPPVSKVLIVGMVGSMLSLVVGLFTPYEFAback to top mRNA from alignment at P-fluviatile_contig13:196605..199416- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1636.1 ID=mRNA_P-fluviatile_contig13.1636.1|Name=mRNA_P-fluviatile_contig13.1636.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2812bp|location=Sequence derived from alignment at P-fluviatile_contig13:196605..199416- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:196605..199416- >mRNA_P-fluviatile_contig13.1636.1 ID=mRNA_P-fluviatile_contig13.1636.1|Name=mRNA_P-fluviatile_contig13.1636.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1668bp|location=Sequence derived from alignment at P-fluviatile_contig13:196605..199416- (Porterinema fluviatile SAG_2381)back to top |