mRNA_P-fluviatile_contig13.1630.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig13.1630.1 vs. uniprot
Match: D7FNV0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNV0_ECTSI) HSP 1 Score: 312 bits (799), Expect = 7.770e-99 Identity = 247/441 (56.01%), Postives = 277/441 (62.81%), Query Frame = 1
Query: 76 QEEKSVPGVSRGALRDERKPLLDLDDVEQLENELAACFDAPPPPPLNIRRGEPVATTVESWMPTSEPRYSETYVPPPTASDVAAAEARGELPRXXXXXXXXXXXXXXGQQA--TRLSDFSSLYAAAPHRAESTGQLYPTLVPSAPSSEALRIPPMPHSAAMATAPA---ATTAAPIAAAVPSWAQGEAAXXXXXXXXXXXXXXXXXXXXXXXSESVGGDTSSS-EVVDELLAENERLRLIIQEMSEELERGSAQAGGVATAAPAAXXXXXXXXXXXXXXXXXXXASSQRSMDIFPGAQAEAARRF----------REQHGVEQPQQXXXXXXXXXXXXXXXXXQTLQSLRPVMFVHFKCENCPQWLKVPGHAQLVYCPLCGHTSQMTASSTIYVPPNNAASDNRARGAAXXXXXXXXXXXXXXGQEEEAGWFSYLKNILSA 1350
QEEKSVPGVS+ ALR+ERKPLLDLDDV QLENELAACFDAPPPPPLNIRR EPVAT V +WMP +E RY ET+V PPTASDVAAA ARGELP+ QQA TR+SDFSSLY+AAPHR ESTGQLYP L PSAP S+ +RIP MP A A +AA AA A XXXXXXXXXXXXXXXXXXXXXXX+ D SSS EVV+ELL+ENERLR IIQEMS+ELERGS A G +TAA A XXX ++R + +PGAQAEAARR Q G +PQ Q ++ FVHFKCENCPQWLKVP HAQLVYCP CGHTSQMT++STI+ XXXXXXXX EEE GW Y K+I+++
Sbjct: 22 QEEKSVPGVSKDALREERKPLLDLDDVAQLENELAACFDAPPPPPLNIRREEPVAT-VSTWMPMAEHRYVETHVAPPTASDVAAARARGELPQLLQEGQEQEGGQLQEQQAQATRVSDFSSLYSAAPHREESTGQLYPVLAPSAPFSDTMRIP-MPPPAVXXXXXXXXRAPSAAFGAAVRDDGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXARERSQDVSSSGEVVEELLSENERLRAIIQEMSDELERGSVPAIGGSTAAAGATQGRQSSAARAXXXAATSATPTERLLGRYPGAQAEAARRRXXXXXXXXXGHRQDGGARPQ-------------TQVQPQVQAAVGAGTFVHFKCENCPQWLKVPVHAQLVYCPTCGHTSQMTSASTIHXXXXXXXXXXXXXXXXXXXXXXXXG-------EEEVGWLGYFKSIIAS 440 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig13.1630.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig13.1630.1 >prot_P-fluviatile_contig13.1630.1 ID=prot_P-fluviatile_contig13.1630.1|Name=mRNA_P-fluviatile_contig13.1630.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=444bp MLATRPSSEEAAASSTASQEEKSVPGVSRGALRDERKPLLDLDDVEQLENback to top mRNA from alignment at P-fluviatile_contig13:129849..135862+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig13.1630.1 ID=mRNA_P-fluviatile_contig13.1630.1|Name=mRNA_P-fluviatile_contig13.1630.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6014bp|location=Sequence derived from alignment at P-fluviatile_contig13:129849..135862+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig13:129849..135862+ >mRNA_P-fluviatile_contig13.1630.1 ID=mRNA_P-fluviatile_contig13.1630.1|Name=mRNA_P-fluviatile_contig13.1630.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2664bp|location=Sequence derived from alignment at P-fluviatile_contig13:129849..135862+ (Porterinema fluviatile SAG_2381)back to top |